EWM28195.1, cds2485 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28195.1 vs. NCBI_GenBank
Match: gi|585110540|gb|EWM28195.1| (ferredoxin [Nannochloropsis gaditana]) HSP 1 Score: 321.627 bits (823), Expect = 3.281e-111 Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0
Query: 1 MRGILRFAITMVMITTTVAFFVPVLLTTHKQSRRVGVMTMLGMFGKKSAGGNKKTFTVTVQQKFYKNAELEVEAGAPVNLRKELMKNKIDIYPLQGKIYNCGGGGQCGTCAIQIIKGAKNLNPKSPVEVKALGGKKGDDIRLACCTRASGDVTVKTKP 158
MRGILRFAITMVMITTTVAFFVPVLLTTHKQSRRVGVMTMLGMFGKKSAGGNKKTFTVTVQQKFYKNAELEVEAGAPVNLRKELMKNKIDIYPLQGKIYNCGGGGQCGTCAIQIIKGAKNLNPKSPVEVKALGGKKGDDIRLACCTRASGDVTVKTKP
Sbjct: 1 MRGILRFAITMVMITTTVAFFVPVLLTTHKQSRRVGVMTMLGMFGKKSAGGNKKTFTVTVQQKFYKNAELEVEAGAPVNLRKELMKNKIDIYPLQGKIYNCGGGGQCGTCAIQIIKGAKNLNPKSPVEVKALGGKKGDDIRLACCTRASGDVTVKTKP 158
BLAST of EWM28195.1 vs. NCBI_GenBank
Match: gi|493669812|ref|WP_006620154.1| (MULTISPECIES: iron ABC transporter substrate-binding protein [Arthrospira] >gi|209493345|gb|EDZ93670.1| ferredoxin [Arthrospira maxima CS-328] >gi|291567887|dbj|BAI90159.1| probable 2Fe-2S ferredoxin [Arthrospira platensis NIES-39] >gi|375323708|emb|CCE20850.1| Ferredoxin (2Fe-2S) [Arthrospira sp. PCC 8005] >gi|406715768|gb|EKD10921.1| ferredoxin [Arthrospira platensis C1] >gi|585304001|emb|CDM93456.1| Ferredoxin (2Fe-2S) [Arthrospira sp. PCC 8005] >gi|647978564|gb|KDR55691.1| iron ABC transporter substrate-binding protein [Arthrospira platensis str. Paraca] >gi|1015661917|gb|AMW28279.1| iron ABC transporter substrate-binding protein [Arthrospira platensis YZ]) HSP 1 Score: 97.4413 bits (241), Expect = 1.684e-23 Identity = 48/94 (51.06%), Postives = 67/94 (71.28%), Query Frame = 0
Query: 65 YKNAELEVEAGAPVNLRKELMKNKIDIYPLQGKIYNCGGGGQCGTCAIQIIKGAKNLNPKSPVEVKALGGKKGDDIRLACCTRASGDVTVKTKP 158
+ N EV A NLR + M+N+ID+Y L+GK+ NCGG GQCGTC +++++G +NL+PK+PVE + L KK D RLAC T +G V+V+TKP
Sbjct: 6 FVNENREVIAADGANLRLKAMENQIDLYTLKGKLLNCGGYGQCGTCIVEVVEGMENLSPKTPVEERML-KKKPDTYRLACQTTVNGPVSVRTKP 98
BLAST of EWM28195.1 vs. NCBI_GenBank
Match: gi|748153534|ref|WP_039727861.1| (iron ABC transporter substrate-binding protein [Lyngbya confervoides] >gi|746958122|gb|KIF15661.1| iron ABC transporter substrate-binding protein [Aphanocapsa montana BDHKU210001] >gi|746984891|gb|KIF40583.1| iron ABC transporter substrate-binding protein [Lyngbya confervoides BDU141951]) HSP 1 Score: 95.9005 bits (237), Expect = 6.704e-23 Identity = 48/94 (51.06%), Postives = 67/94 (71.28%), Query Frame = 0
Query: 65 YKNAELEVEAGAPVNLRKELMKNKIDIYPLQGKIYNCGGGGQCGTCAIQIIKGAKNLNPKSPVEVKALGGKKGDDIRLACCTRASGDVTVKTKP 158
+ N + EV A NLR + M+N IDIY L GK+ NCGG GQCGTC ++I +G++NL+P++ VE + L K+ ++ RLAC T +GD+TVKTKP
Sbjct: 6 FLNEDKEVIAADGANLRYKAMENDIDIYTLVGKMMNCGGYGQCGTCVVEITEGSENLSPRTQVEERKL-RKRPENCRLACQTLVNGDITVKTKP 98
BLAST of EWM28195.1 vs. NCBI_GenBank
Match: gi|1003383629|dbj|BAU63453.1| (ferredoxin [Stanieria sp. NIES-3757]) HSP 1 Score: 94.7449 bits (234), Expect = 1.948e-22 Identity = 47/96 (48.96%), Postives = 69/96 (71.88%), Query Frame = 0
Query: 63 KFYKNAELEVEAGAPVNLRKELMKNKIDIYPLQGKIYNCGGGGQCGTCAIQIIKGAKNLNPKSPVEVKALGGKKGDDIRLACCTRASGDVTVKTKP 158
KF K + E+ A NLR++ ++N IDIY L+GK+ NCGG GQCGTC ++I++G ++L+PK+P E + L +K D RLAC T +G+++VKTKP
Sbjct: 5 KFVKE-DKEIIAANGANLREKALQNGIDIYTLRGKLVNCGGYGQCGTCIVEIVEGMEHLSPKTPFEARKL-KRKPDSYRLACQTLVNGEISVKTKP 98
BLAST of EWM28195.1 vs. NCBI_GenBank
Match: gi|499751213|ref|WP_011431947.1| (iron ABC transporter substrate-binding protein [Synechococcus sp. JA-2-3B'a(2-13)] >gi|86556321|gb|ABD01278.1| iron-sulfur cluster-binding protein [Synechococcus sp. JA-2-3B'a(2-13)]) HSP 1 Score: 93.9745 bits (232), Expect = 4.077e-22 Identity = 45/93 (48.39%), Postives = 67/93 (72.04%), Query Frame = 0
Query: 66 KNAELEVEAGAPVNLRKELMKNKIDIYPLQGKIYNCGGGGQCGTCAIQIIKGAKNLNPKSPVEVKALGGKKGDDIRLACCTRASGDVTVKTKP 158
+N E+ V GA NLR + ++N+ID+Y + K+ NCGG GQCGTC ++I++G++NL+P++ E + L +K D RLAC T+ GDV+VKTKP
Sbjct: 9 ENREIFVAEGA--NLRLKALENQIDLYKMMAKLLNCGGNGQCGTCVVEIVEGSENLSPRTEAENRKL-KRKPDSYRLACQTKVLGDVSVKTKP 98
BLAST of EWM28195.1 vs. NCBI_GenBank
Match: gi|499748806|ref|WP_011429540.1| (iron ABC transporter substrate-binding protein [Synechococcus sp. JA-3-3Ab] >gi|86553899|gb|ABC98857.1| iron-sulfur cluster-binding protein [Synechococcus sp. JA-3-3Ab]) HSP 1 Score: 93.5893 bits (231), Expect = 4.594e-22 Identity = 46/93 (49.46%), Postives = 66/93 (70.97%), Query Frame = 0
Query: 66 KNAELEVEAGAPVNLRKELMKNKIDIYPLQGKIYNCGGGGQCGTCAIQIIKGAKNLNPKSPVEVKALGGKKGDDIRLACCTRASGDVTVKTKP 158
+N E+ V GA NLR + ++N+ID+Y + K+ NCGG GQCGTC ++I++GA+NL+P++ E + L +K D RLAC T+ GDV VKTKP
Sbjct: 9 ENREIVVAEGA--NLRLKALENQIDLYKMMAKLLNCGGNGQCGTCVVEIVEGAENLSPRTEAENRKL-KRKPDTYRLACQTKVLGDVAVKTKP 98
BLAST of EWM28195.1 vs. NCBI_GenBank
Match: gi|1094115057|ref|WP_071104556.1| (iron ABC transporter substrate-binding protein [Moorea producens] >gi|1092222865|gb|AOY81207.1| iron ABC transporter substrate-binding protein [Moorea producens JHB]) HSP 1 Score: 93.9745 bits (232), Expect = 4.971e-22 Identity = 48/96 (50.00%), Postives = 68/96 (70.83%), Query Frame = 0
Query: 63 KFYKNAELEVEAGAPVNLRKELMKNKIDIYPLQGKIYNCGGGGQCGTCAIQIIKGAKNLNPKSPVEVKALGGKKGDDIRLACCTRASGDVTVKTKP 158
KF K + EV A NLR+++++N+ID+Y +GK+ NCGG GQCGTC ++I+ G +NL+P++ VE + L KK D+ RLAC +G VTVKTKP
Sbjct: 5 KFVKEDQ-EVIAANGANLREKMLQNRIDLYTFRGKLVNCGGYGQCGTCIVEIVAGIENLSPRTEVENRKL-KKKPDNYRLACQVLVNGPVTVKTKP 98
BLAST of EWM28195.1 vs. NCBI_GenBank
Match: gi|442790976|gb|ELS00477.1| (ferredoxin [Xenococcus sp. PCC 7305]) HSP 1 Score: 93.2041 bits (230), Expect = 1.029e-21 Identity = 49/96 (51.04%), Postives = 64/96 (66.67%), Query Frame = 0
Query: 63 KFYKNAELEVEAGAPVNLRKELMKNKIDIYPLQGKIYNCGGGGQCGTCAIQIIKGAKNLNPKSPVEVKALGGKKGDDIRLACCTRASGDVTVKTKP 158
KF K E EV NLR+ ++NKIDIY L+GK+ NCGG GQCGTC ++I++G +NL+P++ E + L KK D RLAC +G VTV TKP
Sbjct: 10 KFVKE-EKEVVFALGANLRERALENKIDIYTLKGKLTNCGGYGQCGTCVVEIVEGMENLSPRTAFEQRKL-KKKPDSYRLACQATVNGSVTVATKP 103
BLAST of EWM28195.1 vs. NCBI_GenBank
Match: gi|1054575551|ref|WP_066344425.1| (iron ABC transporter substrate-binding protein [Geminocystis sp. NIES-3708] >gi|770467597|dbj|BAQ60495.1| ferredoxin [Geminocystis sp. NIES-3708]) HSP 1 Score: 92.8189 bits (229), Expect = 1.048e-21 Identity = 48/94 (51.06%), Postives = 63/94 (67.02%), Query Frame = 0
Query: 65 YKNAELEVEAGAPVNLRKELMKNKIDIYPLQGKIYNCGGGGQCGTCAIQIIKGAKNLNPKSPVEVKALGGKKGDDIRLACCTRASGDVTVKTKP 158
+ N EV A NLR++ ++N IDIY +GK+ NCGG GQC TC I+I+ G +NL+PK+ E + L KK RLAC T A+GDVT+KTKP
Sbjct: 6 FINENKEVVAADGANLREKALQNGIDIYKFRGKLMNCGGYGQCATCVIEIVSGIENLSPKTDFEERKL-RKKPASYRLACQTLANGDVTIKTKP 98
BLAST of EWM28195.1 vs. NCBI_GenBank
Match: gi|504957989|ref|WP_015145091.1| (ferredoxin [Pleurocapsa minor] >gi|427981192|gb|AFY78792.1| ferredoxin [Pleurocapsa sp. PCC 7327]) HSP 1 Score: 92.8189 bits (229), Expect = 1.048e-21 Identity = 47/90 (52.22%), Postives = 65/90 (72.22%), Query Frame = 0
Query: 69 ELEVEAGAPVNLRKELMKNKIDIYPLQGKIYNCGGGGQCGTCAIQIIKGAKNLNPKSPVEVKALGGKKGDDIRLACCTRASGDVTVKTKP 158
E EV A NLR++ ++N+IDIY L+GK+ NCGG GQCGTC ++I++G +NL+PK+ E++ L KK + RLAC T +G V VKTKP
Sbjct: 10 EKEVIAADGANLREKALQNRIDIYTLKGKLTNCGGYGQCGTCIVEIVEGMENLSPKTDFELRKL-KKKPESYRLACQTLVNGPVKVKTKP 98 The following BLAST results are available for this feature:
BLAST of EWM28195.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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