EWM28280.1, cds2484 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28280.1 vs. NCBI_GenBank
Match: gi|585110625|gb|EWM28280.1| (solute carrier family 40 member 1 [Nannochloropsis gaditana]) HSP 1 Score: 1266.52 bits (3276), Expect = 0.000e+0 Identity = 614/614 (100.00%), Postives = 614/614 (100.00%), Query Frame = 0
Query: 1 MTRDKDVAQNSSTVYKYGAVEVPKDALFHGDQANPADVSSPLADSLKPSSASTMPMYDQKRTLYRNLILSRHLSSALLQRMWEFSVIMLLTVIGPSNSFHLIATYGITVNLTVVLFSPSIGSYIDEANRLRAVVLVTSMQNTCVVGCCICFIIALWGHIATGWALSLCVGLIHVGGALNMLFQGLSNVILERDWVVVLAEDDDAWLRSITTNLKAIDLSSNVVAPFLVSVIQSVGSNCAVAWTLSILNFLMIYMQYLALLRIYQEVPALAIKDRGVQRSNHDAQVGDDAVYLDKTEEGPEKGRITESHASYKRITQKFSHFFGLIESRFSAVFRNGFLHAQIYARQRTFLPGLAMAMLYFTVLTFHNTMLAYLLSQGLHLNYVAMAQGGSAAMGVLGTLFYKWAATRFGTVCVGIMGLWQQVACLTVAVAALYVPLWRRDRHNHAEEVNVVSIATAFFMGSVGLSRLGLIAFDVAGAQLFQYLVDEESRGVVGGFQRTLESMFELLMYFLVLWRPRPDQFPSSAAFSYITVVAAALIFSFFACRVRGIGFVVLKGGFETDENRIIDHGGSRPAAASSPILSYNHYDKWPVSDSFRLVGIKIESSSQETAKQFRD 614
MTRDKDVAQNSSTVYKYGAVEVPKDALFHGDQANPADVSSPLADSLKPSSASTMPMYDQKRTLYRNLILSRHLSSALLQRMWEFSVIMLLTVIGPSNSFHLIATYGITVNLTVVLFSPSIGSYIDEANRLRAVVLVTSMQNTCVVGCCICFIIALWGHIATGWALSLCVGLIHVGGALNMLFQGLSNVILERDWVVVLAEDDDAWLRSITTNLKAIDLSSNVVAPFLVSVIQSVGSNCAVAWTLSILNFLMIYMQYLALLRIYQEVPALAIKDRGVQRSNHDAQVGDDAVYLDKTEEGPEKGRITESHASYKRITQKFSHFFGLIESRFSAVFRNGFLHAQIYARQRTFLPGLAMAMLYFTVLTFHNTMLAYLLSQGLHLNYVAMAQGGSAAMGVLGTLFYKWAATRFGTVCVGIMGLWQQVACLTVAVAALYVPLWRRDRHNHAEEVNVVSIATAFFMGSVGLSRLGLIAFDVAGAQLFQYLVDEESRGVVGGFQRTLESMFELLMYFLVLWRPRPDQFPSSAAFSYITVVAAALIFSFFACRVRGIGFVVLKGGFETDENRIIDHGGSRPAAASSPILSYNHYDKWPVSDSFRLVGIKIESSSQETAKQFRD
Sbjct: 1 MTRDKDVAQNSSTVYKYGAVEVPKDALFHGDQANPADVSSPLADSLKPSSASTMPMYDQKRTLYRNLILSRHLSSALLQRMWEFSVIMLLTVIGPSNSFHLIATYGITVNLTVVLFSPSIGSYIDEANRLRAVVLVTSMQNTCVVGCCICFIIALWGHIATGWALSLCVGLIHVGGALNMLFQGLSNVILERDWVVVLAEDDDAWLRSITTNLKAIDLSSNVVAPFLVSVIQSVGSNCAVAWTLSILNFLMIYMQYLALLRIYQEVPALAIKDRGVQRSNHDAQVGDDAVYLDKTEEGPEKGRITESHASYKRITQKFSHFFGLIESRFSAVFRNGFLHAQIYARQRTFLPGLAMAMLYFTVLTFHNTMLAYLLSQGLHLNYVAMAQGGSAAMGVLGTLFYKWAATRFGTVCVGIMGLWQQVACLTVAVAALYVPLWRRDRHNHAEEVNVVSIATAFFMGSVGLSRLGLIAFDVAGAQLFQYLVDEESRGVVGGFQRTLESMFELLMYFLVLWRPRPDQFPSSAAFSYITVVAAALIFSFFACRVRGIGFVVLKGGFETDENRIIDHGGSRPAAASSPILSYNHYDKWPVSDSFRLVGIKIESSSQETAKQFRD 614
BLAST of EWM28280.1 vs. NCBI_GenBank
Match: gi|168001583|ref|XP_001753494.1| (predicted protein [Physcomitrella patens] >gi|162695373|gb|EDQ81717.1| predicted protein [Physcomitrella patens]) HSP 1 Score: 192.2 bits (487), Expect = 1.273e-50 Identity = 151/486 (31.07%), Postives = 249/486 (51.23%), Query Frame = 0
Query: 72 HLSSALLQRMWEFSVIMLLTVIGPSNSFHLIATYGITVNLTVVLFSPSIGSYIDEANRLRAVVLVTSMQNTCVVGCCICFIIALWGHIATGWALSLCVGLI---HVGGALNMLFQGLSNVILERDWVVVLAEDD-DAWLRSITTNLKAIDLSSNVVAPFLVSVIQSVGSNCAVAWTLSILNFLMIYMQYLALLRIYQEVPALAIKDRGVQRSNHDAQVGD-DAVYLDKTEEGPEKGRITESHASYKRITQKFSHFFGLIESRFSAVFRNGFLHAQIYARQRTFLPGLAMAMLYFTVLTFHNTMLAYLLSQGLHLNYVAMAQGGSAAMGVLGTLFYKWAATRFGTVCVGIMGLWQQVACLTVAVAALYVPLWRRDRHNHAEEVNVVSIATAFFMGSVGLSRLGLIAFDVAGAQLFQYLVDEESRGVVGGFQRTLESMFELLMYF--LVLWRPR---PDQFPSSAAFSYITVVAAALIFSFFACRVRG 547
H S RMWEF+V + + + P NS L+A YG+ +V +G+ +D+ RLR V +QN VV + ++ L AT S+ V L+ +V GA++ L +V++ERDWVV++AE L I + ++ IDLS ++AP +V + S S A +++ N + + ++Y L +Y +PAL K Q +Q + +A ++ + EG E+ + ++ ++ T + S F ++ + + G++ Y Q L GLA+A+LYFTVL+F + M A+L +G+ + +A+G +A MG+L T + R TV G +W Q + L+V V ++++ HN +A+ + V SRLGL FD++ QL Q V RGVVGG QR+L+S+ ++L Y +V+ RP+ P F + SY V+ +AL++S RVRG
Sbjct: 15 HFLSRWGDRMWEFAVGLFMIQVWP-NSLLLVAIYGLVETASVATLGVLVGNLVDKCPRLRMVQFSLGIQNGSVVAAGLAVVMLLLHPWATPGGFSVFVMLVVIVNVFGAISALAGMAMDVVVERDWVVLIAEKQAPGSLTKINSVMRRIDLSCKLLAPIVVGFMMSSVSVLASPVLIAVWNIISVGIEYWLLHHVYVSMPALQQKSTAHQAYQASSQFAESNAEEVELSMEGHEEVSLLKNTG--QQTTSRQSTFLNKLK-KLPVI--EGWV---TYMHQEAVLAGLALAVLYFTVLSFGSLMSAFLSWRGIPPYVLGLARGVAAMMGILATFIFPIVHARLQTVRTGNWSIWIQWSLLSVCVVSVWI-------HNS-------KVASLLLISGVAASRLGLWLFDLSVTQLMQESVPVAERGVVGGVQRSLQSLMDMLTYAVGMVIVRPQASYPKDFGITICMSYGAVLTSALLYSMHVYRVRG 477
BLAST of EWM28280.1 vs. NCBI_GenBank
Match: gi|661889698|emb|CDP06418.1| (unnamed protein product [Coffea canephora]) HSP 1 Score: 187.193 bits (474), Expect = 1.275e-48 Identity = 148/473 (31.29%), Postives = 230/473 (48.63%), Query Frame = 0
Query: 80 RMWEFSVIMLLTVIGPSNSFHLIATYGITVNLTVVLFSPSIGSYIDEANRLRAVVLVTSMQNTC--VVGCCICFIIALWGHIATGWALSLC-VGLIHVGGALNMLFQGLSNVILERDWVVVLAE-DDDAWLRSITTNLKAIDLSSNVVAPFLVSVIQSVGSNCAVAWTLSILNFLMIYMQYLALLRIYQEVPALA-IKDRGVQRSNHDAQVGDDAVYLDKTEEGPEKGRITESHASYKRITQKFSHFFGLIESRFSAVFRNGFLHA-QIYARQRTFLPGLAMAMLYFTVLTFHNTMLAYLLSQGLHLNYVAMAQGGSAAMGVLGTLFYKWAATRFGTVCVGIMGLWQQVACLTVAVAALYVPLWRRDRHNHAEEVNVVSIATAFFMGSVGLSRLGLIAFDVAGAQLFQYLVDEESRGVVGGFQRTLESMFELLMYFLVLWRPRPDQFPSSAAFSYITVVAAALIFSFFACRVR 546
RMWEFSV + + + P +S L A YG+ + + LF P +G +D+ ++ + L QN + G + ++ + + + L + LI++ GA+ +LF +++ER+WVVV++E L + ++ IDL + AP + I S S A A TL+I N L + +QY L+ +Y +PAL+ + V RS + D+ T+E SH + H G + V R + A ++Y Q LPG+A+A+LYFTVL+F M A L QG+ + +A+G SA +G+L T Y ++ T+ G+ +W Q CL V VA+++VP N + A MG V LSRLGL FD+A Q Q V E R VVGG Q +L+S+ +L Y + + P F S + V AA+++S RVR
Sbjct: 40 RMWEFSVGLYMINVWP-DSLALAAAYGVVESASTALFGPVVGRLVDKFTYIKVLRLWLLSQNFSFMIAGGTVVALLLYEDVKSENFIVFLSFILLINISGAVGVLFTLAGTILVEREWVVVISEGQHPGVLTKMNATIRRIDLVCKLFAPVVSGFIISFVSLTASALTLAIWNILSVCLQYWLLMSVYNGIPALSESSQKRVYRS-----LPTDSERSSLTDES------RNSHCLGDNDLEPLGH--GWMRKVIERVSRISYFSAWKVYLEQDVVLPGIALALLYFTVLSFGTLMTAALEWQGIPAYIIGIARGTSATIGILATFLYPVLESQLSTLRTGLWSIWSQWTCLVVCVASIWVP-------------NKLG-AAYLLMGGVALSRLGLWMFDLAVIQQMQDQVPESDRCVVGGVQNSLQSVLDLTTYVMGIIISNPRDFWKLIILSLLVVTLAAVLYSIHIYRVR 484
BLAST of EWM28280.1 vs. NCBI_GenBank
Match: gi|42567622|ref|NP_195977.2| (iron regulated 2 [Arabidopsis thaliana] >gi|334187405|ref|NP_001190217.1| iron regulated 2 [Arabidopsis thaliana] >gi|380877132|sp|F4KGN5.1|S40A2_ARATH RecName: Full=Solute carrier family 40 member 2; AltName: Full=Ferroportin-2; AltName: Full=Iron-regulated transporter 2; Short=AtIREG2 >gi|332003245|gb|AED90628.1| iron regulated 2 [Arabidopsis thaliana] >gi|332003246|gb|AED90629.1| iron regulated 2 [Arabidopsis thaliana]) HSP 1 Score: 187.193 bits (474), Expect = 1.301e-48 Identity = 147/496 (29.64%), Postives = 242/496 (48.79%), Query Frame = 0
Query: 62 TLYRNLILSRHLSSALLQ---RMWEFSVIMLLTVIGPSNSFHLIATYGITVNLTVVLFSPSIGSYIDEANRLRAVVLVTSMQNTCVV---GCCICFIIALWGHIATGWALSLCVGLIHVGGALNMLFQGLSNVILERDWVVVLAE-DDDAWLRSITTNLKAIDLSSNVVAPFLVSVIQSVGSNCAVAWTLSILNFLMIYMQYLALLRIYQEVPALAIKD--RGVQRSNHDAQVGDDA--VYLDKTEEGPEKGRITESHASYKRITQKFSHFFGLIESRFSAVFRNGFLHAQIYARQRTFLPGLAMAMLYFTVLTFHNTMLAYLLSQGLHLNYVAMAQGGSAAMGVLGTLFYKWAATRFGTVCVGIMGLWQQVACLTVAVAALYVPLWRRDRHNHAEEVNVVSIATAFFMGSVGLSRLGLIAFDVAGAQLFQYLVDEESRGVVGGFQRTLESMFELLMYFLVLWRPRPDQFPSSAAFSYITVVAAALIFSFFACRVR 546
+L R++++S +L L + R WEFSV + + + P NS L A YG+ + + LF P +G ID + ++ + L QN + G + ++ + V L ++ GA+ +L V++ERDWVVV++E A L + + ++ IDLSS +++P + +I S S A A T + + ++++Y + +Y VPA+ D R ++ S A+ D A Y+ E E R T+S + RI ++ S ES F + +RN Y Q LPG+++A+L+FTVL+F M A L +G+ + + +G SA +G+ T+ Y +R + G+ W Q CL V V +++V +++ IA+ M V SRLGL FD+A Q Q LV E R VVGG Q +L+S +L+ L + P F S+ TV A ++++ R+R
Sbjct: 28 SLPRSMVISLYLGYFLARWGARTWEFSVALYMIYLWP-NSLFLTAMYGVVESGSATLFGPIVGQMIDGMSYVKVLRLWLVTQNLSFIVAGGAVVALLVVPDLKSQNFPVFATLVVLTNLSGAIGVLSTLAGTVLIERDWVVVMSEGHSPAVLTRMNSVIRGIDLSSKLLSPVITGLIISFVSLRASAITFAAWATITVWIEYWLFISVYNGVPAIVQSDERRSLRSSQSQAEETDSASSFYVPLLHE-EESYRNTQSRSRILRILERIS------ESSFVSAWRN-------YLNQEIVLPGVSLALLFFTVLSFGTLMTATLEWKGIPTYIIGIGRGISAGVGLAATVLYPLMQSRISPLRTGVWSFWSQWTCLLVCVGSIWV---EKEK-----------IASYMLMAGVAASRLGLWMFDLAVIQQMQDLVPESDRCVVGGVQNSLQSALDLMANLLGIIVSNPKDFWMLTLISFATVSLAGILYTIHLYRIR 494
BLAST of EWM28280.1 vs. NCBI_GenBank
Match: gi|1032279585|gb|OAO93913.1| (IREG2 [Arabidopsis thaliana]) HSP 1 Score: 186.808 bits (473), Expect = 1.748e-48 Identity = 147/496 (29.64%), Postives = 242/496 (48.79%), Query Frame = 0
Query: 62 TLYRNLILSRHLSSALLQ---RMWEFSVIMLLTVIGPSNSFHLIATYGITVNLTVVLFSPSIGSYIDEANRLRAVVLVTSMQNTCVV---GCCICFIIALWGHIATGWALSLCVGLIHVGGALNMLFQGLSNVILERDWVVVLAED-DDAWLRSITTNLKAIDLSSNVVAPFLVSVIQSVGSNCAVAWTLSILNFLMIYMQYLALLRIYQEVPALAIKD--RGVQRSNHDAQVGDDA--VYLDKTEEGPEKGRITESHASYKRITQKFSHFFGLIESRFSAVFRNGFLHAQIYARQRTFLPGLAMAMLYFTVLTFHNTMLAYLLSQGLHLNYVAMAQGGSAAMGVLGTLFYKWAATRFGTVCVGIMGLWQQVACLTVAVAALYVPLWRRDRHNHAEEVNVVSIATAFFMGSVGLSRLGLIAFDVAGAQLFQYLVDEESRGVVGGFQRTLESMFELLMYFLVLWRPRPDQFPSSAAFSYITVVAAALIFSFFACRVR 546
+L R++++S +L L + R WEFSV + + + P NS L A YG+ + + LF P +G ID + ++ + L QN + G + ++ + V L ++ GA+ +L V++ERDWVVV++E A L + + ++ IDLSS +++P + +I S S A A T + + ++++Y + +Y VPA+ D R ++ S A+ D A Y+ E E R T+S + RI ++ S ES F + +RN Y Q LPG+++A+L+FTVL+F M A L +G+ + + +G SA +G+ T+ Y +R + G+ W Q CL V V +++V +++ IA+ M V SRLGL FD+A Q Q LV E R VVGG Q +L+S +L+ L + P F S+ TV A ++++ R+R
Sbjct: 25 SLPRSMVISLYLGYFLARWGARTWEFSVALYMIYLWP-NSLFLTAMYGVVESGSATLFGPIVGQMIDGMSYVKVLRLWLVTQNLSFIVAGGAVVALLVVPDLKSQNFPVFATLVVLTNLSGAIGVLSTLAGTVLIERDWVVVMSEGHSPAVLTRMNSVIRGIDLSSKLLSPVITGLIISFVSLRASAITFAAWATITVWIEYWLFISVYNGVPAIVQSDERRSLRSSQSQAEETDSASSFYVPLLHE-EESYRNTQSRSRILRILERIS------ESSFVSAWRN-------YLNQEIVLPGVSLALLFFTVLSFGTLMTATLEWKGIPTYIIGIGRGISAGVGLAATVLYPLMQSRVSPLRTGVWSFWSQWTCLLVCVGSIWV---EKEK-----------IASYMLMAGVAASRLGLWMFDLAVIQQMQDLVPESDRCVVGGVQNSLQSALDLMANLLGIIVSNPKDFWMLTLISFATVSLAGILYTIHLYRIR 491
BLAST of EWM28280.1 vs. NCBI_GenBank
Match: gi|1063729716|ref|NP_001332409.1| (iron regulated 2 [Arabidopsis thaliana] >gi|1039021862|gb|ANM70830.1| iron regulated 2 [Arabidopsis thaliana]) HSP 1 Score: 184.111 bits (466), Expect = 6.421e-48 Identity = 142/478 (29.71%), Postives = 232/478 (48.54%), Query Frame = 0
Query: 77 LLQRMWEFSVIMLLTVIGPSNSFHLIATYGITVNLTVVLFSPSIGSYIDEANRLRAVVLVTSMQNTCVV---GCCICFIIALWGHIATGWALSLCVGLIHVGGALNMLFQGLSNVILERDWVVVLAE-DDDAWLRSITTNLKAIDLSSNVVAPFLVSVIQSVGSNCAVAWTLSILNFLMIYMQYLALLRIYQEVPALAIKD--RGVQRSNHDAQVGDDA--VYLDKTEEGPEKGRITESHASYKRITQKFSHFFGLIESRFSAVFRNGFLHAQIYARQRTFLPGLAMAMLYFTVLTFHNTMLAYLLSQGLHLNYVAMAQGGSAAMGVLGTLFYKWAATRFGTVCVGIMGLWQQVACLTVAVAALYVPLWRRDRHNHAEEVNVVSIATAFFMGSVGLSRLGLIAFDVAGAQLFQYLVDEESRGVVGGFQRTLESMFELLMYFLVLWRPRPDQFPSSAAFSYITVVAAALIFSFFACRVR 546
++ R WEFSV + + + P NS L A YG+ + + LF P +G ID + ++ + L QN + G + ++ + V L ++ GA+ +L V++ERDWVVV++E A L + + ++ IDLSS +++P + +I S S A A T + + ++++Y + +Y VPA+ D R ++ S A+ D A Y+ E E R T+S + RI ++ S ES F + +RN Y Q LPG+++A+L+FTVL+F M A L +G+ + + +G SA +G+ T+ Y +R + G+ W Q CL V V +++V +++ IA+ M V SRLGL FD+A Q Q LV E R VVGG Q +L+S +L+ L + P F S+ TV A ++++ R+R
Sbjct: 1 MICRTWEFSVALYMIYLWP-NSLFLTAMYGVVESGSATLFGPIVGQMIDGMSYVKVLRLWLVTQNLSFIVAGGAVVALLVVPDLKSQNFPVFATLVVLTNLSGAIGVLSTLAGTVLIERDWVVVMSEGHSPAVLTRMNSVIRGIDLSSKLLSPVITGLIISFVSLRASAITFAAWATITVWIEYWLFISVYNGVPAIVQSDERRSLRSSQSQAEETDSASSFYVPLLHE-EESYRNTQSRSRILRILERIS------ESSFVSAWRN-------YLNQEIVLPGVSLALLFFTVLSFGTLMTATLEWKGIPTYIIGIGRGISAGVGLAATVLYPLMQSRISPLRTGVWSFWSQWTCLLVCVGSIWV---EKEK-----------IASYMLMAGVAASRLGLWMFDLAVIQQMQDLVPESDRCVVGGVQNSLQSALDLMANLLGIIVSNPKDFWMLTLISFATVSLAGILYTIHLYRIR 449
BLAST of EWM28280.1 vs. NCBI_GenBank
Match: gi|848862919|ref|XP_012832234.1| (PREDICTED: solute carrier family 40 member 2-like [Erythranthe guttata] >gi|604342951|gb|EYU41975.1| hypothetical protein MIMGU_mgv1a005259mg [Erythranthe guttata]) HSP 1 Score: 184.111 bits (466), Expect = 1.193e-47 Identity = 147/506 (29.05%), Postives = 253/506 (50.00%), Query Frame = 0
Query: 55 PMYDQKR----TLYRNLILSRHLSSALLQ---RMWEFSVIMLLTVIGPSNSFHLIATYGITVNLTVVLFSPSIGSYIDEANRLRAVVLVTSMQNTC--VVGCCICFIIALWGHIATGWA--LSLCVGLIHVGGALNMLFQGLSNVILERDWVVVLAEDDDAWLRS-ITTNLKAIDLSSNVVAPFLVSVIQSVGSNCAVAWTLSILNFLMIYMQYLALLRIYQEVPAL-AIKDRGVQRSNHDAQVGDDAVYLDKTEEGPEKGRITESHASYKRITQKFSHFFGLIESRFSAVFRNGFLHAQI-YARQRTFLPGLAMAMLYFTVLTFHNTMLAYLLSQGLHLNYVAMAQGGSAAMGVLGTLFYKWAATRFGTVCVGIMGLWQQVACLTVAVAALYVPLWRRDRHNHAEEVNVVSIATAFFMGSVGLSRLGLIAFDVAGAQLFQYLVDEESRGVVGGFQRTLESMFELLMYFLVLWRPRPDQFPSSAAFSYITVVAAALIFSFFACRVR 546
P+ DQ++ T +L+++ ++ L + RMWEFSV + + + P +S L A YG+ + + LF P IG ++D + ++ + + QN V G + I+A I+ + +SL + LI++ GA+ +L +++ER+WVVV++E +++ + + ++ IDL+ + AP + I S S A A TL++ N L +++QY L+ +Y+ +P L R V +S+ + + ++ E KG I ++F + ++ A I Y +Q LPGL++A+LYFTVL+F M A L QG+ + +A+G SA +G+ T Y +R T+ G+ +W Q CL + VA++ V + + ++ MG V LSRLGL FD++ Q Q V E R VVGG Q +L+S +L+ Y + + P +F S++ V AA+++S RVR
Sbjct: 4 PLLDQEQQHNPTFSSSLLVNLYVGHFLARWGARMWEFSVGLYMINVWP-DSLLLAAAYGVVESSSTALFGPLIGHWVDNLSYIQVLRIWLLSQNLSFMVAGGAVVAILAYPNSISANYTSFISLVL-LINISGAVGVLSTLGGTILIEREWVVVISEGQPPEVQTKMNSTIRRIDLTCKLFAPVVSGFIISFVSLTASAVTLALWNVLSVFLQYWLLMSVYKGIPILRQFSQRRVSKSSVMEVDESTSTHQEQDESSSSKG---------TTIIERFLNL--------------PYISAWILYFKQDVVLPGLSLALLYFTVLSFGTLMTAALEWQGIPAYVIGIARGISATVGIAATFLYPVLQSRMSTLRTGLWSIWSQWTCLLLCVASVLV----KGKM----------VSAYMLMGGVALSRLGLWMFDLSVIQQMQDHVAESDRCVVGGAQSSLQSTLDLMTYIMGIIISNPQEFWKLTMLSFVLVTIAAVLYSVHIYRVR 470
BLAST of EWM28280.1 vs. NCBI_GenBank
Match: gi|731344753|ref|XP_010683584.1| (PREDICTED: LOW QUALITY PROTEIN: solute carrier family 40 member 1-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 183.726 bits (465), Expect = 1.966e-47 Identity = 152/519 (29.29%), Postives = 246/519 (47.40%), Query Frame = 0
Query: 30 GDQANPADVSSPLADSLKPSSASTMPMYDQKRTLYRNLILSRHLSSALLQRMWEFSVIMLLTVIGPSNSFHLIATYGITVNLTVVLFSPSIGSYIDEANRLRAVVLVTSMQNTCVVGCCICFIIALWGHIATGWALSLCVGLIHVGGALNMLFQGLSNVILERDWVVVLAEDDDAW-LRSITTNLKAIDLSSNVVAPFLVSVIQSVGSNCAVAWTLSILNFLMIYMQYLALLRIYQEVPALAIKDRGVQRSNHDAQVGDDAVYL-DKTEEGPEKGRITESHASYKRITQKFSHFFGLIESRFSAVFRNGFLHAQIYARQRTFLPGLAMAMLYFTVLTFHNTMLAYLLSQGLHLNYVAMAQGGSAAMGVLGTLFYKWAATRFGTVCVGIMGLWQQVACLTVAVAALYVPLWRRDRHNHAEEVNVVSIATAFFMGSVGLSRLGLIAFDVAGAQLFQYLVDEESRGVVGGFQRTLESMFELLMYFLVLWRPRPDQFPSSAAFSYITVVAAALIFSFFACRVR 546
GD A+V PL D P + T + + H S RMWEFSV + + I P +S L A YG+ + +V LF P IG +++ ++ + L T QN V I II L T + V + ++ GA+ +L +++ER+WVVV++ED + L + + L+ IDL + AP + + S S A A L++ N + + +QY L +Y+ VPAL +KD ++R + + + ++ ++ P + R S A +QK +F F ++Y Q LPGLA+A+LYFTVL+F + M A L QG+ + +A+G SA +G+ T Y +R T+ G+ +W Q + L + V + +W +D + ++ MG V SRLGL FD+A Q Q V + R +VGG Q +++S +LL Y + + P+ F S+ V A++++ RVR
Sbjct: 2 GDVEVEAEVRQPLID----------PEIETLSTSLISCLYVAHFLSRWSARMWEFSVALYMIHIWP-DSLLLTALYGVVESASVALFGPIIGQWVNTLTYVKVLQLWTVSQNLSFVVAGITVIILLVYSGLTSIMFAALVLVTYLSGAVAVLSTLAGTILIEREWVVVISEDQPSGVLTKLNSVLRRIDLVCKLGAPVVSGFLISFVSLTASAIFLAVWNIISVCLQYWLLSSVYRGVPALRMKD--IKRKEISSHEHEPSTFVTEQNASLPFEDRSNNSSAG----SQKLGCL---------PIFPC-FGAWKVYLNQEVVLPGLALALLYFTVLSFGSLMTASLEWQGIPAYVIGIARGISAIVGITATFTYPILESRLSTLRTGLWSIWSQWSFLLLCVGS----IWVKDGMS----------SSYMLMGGVAASRLGLWMFDLAVIQQMQDQVPDSDRCIVGGVQNSIQSTMDLLGYVMGVIVSNPEHFWELILISFAIVTLGAVLYTMHIWRVR 479
BLAST of EWM28280.1 vs. NCBI_GenBank
Match: gi|1021029072|gb|KZM86857.1| (hypothetical protein DCAR_023991 [Daucus carota subsp. sativus]) HSP 1 Score: 184.111 bits (466), Expect = 2.677e-47 Identity = 144/472 (30.51%), Postives = 232/472 (49.15%), Query Frame = 0
Query: 80 RMWEFSVIMLLTVIGPSNSFHLIATYGITVNLTVVLFSPSIGSYIDE---ANRLRAVVLVTSMQNTCVVGCCICFIIALWGHIATGWALSLCVGLIHVGGALNMLFQGLSNVILERDWVVVLAEDDDAW-LRSITTNLKAIDLSSNVVAPFLVSVIQSVGSNCAVAWTLSILNFLMIYMQYLALLRIYQEVPALAIKDRGVQRSNHDAQVGDDAVYLDKTEEGPEKGRITESHASYKRITQKFSHFFGLIESRFSAVFRNGFLHA-QIYARQRTFLPGLAMAMLYFTVLTFHNTMLAYLLSQGLHLNYVAMAQGGSAAMGVLGTLFYKWAATRFGTVCVGIMGLWQQVACLTVAVAALYVPLWRRDRHNHAEEVNVVSIATAFFMGSVGLSRLGLIAFDVAGAQLFQYLVDEESRGVVGGFQRTLESMFELLMYFLVLWRPRPDQFPSSAAFSYITVVAAALIFSFFACRVR 546
RMWEFSV + + + P S L A YG + LF P +G ++D+ L+ + + S+ G I ++ A L + I++ GA+ +L +++ER+WVVV++E L ++ + ++ IDL + AP + I S S A A +++I N + + ++Y LL +Y ++P L+ D+ +RS+ A EEGP +E + + Q ++ G + +F F N + A ++Y Q LPG+A+A+LYFTVL+F + M A L QG+ + +A+G SA +G+ T Y +R T+ G+ +W Q A L V VA+ +W +D+ A MG V LSRLGL FD++ QL Q V E R +VGG Q +L++M +L+ Y + L P +F S+ V AA ++S RVR
Sbjct: 74 RMWEFSVGLYMIDVWP-GSLLLTAAYGAVEAASTALFGPLVGQWVDKLTYKKVLQNWLFIRSVSFVVAGGTVIGVLVYPALKSDNVVAFILLIISINISGAVGVLSTLAGTILIEREWVVVISEGQPPEVLTNMNSIIRRIDLICKLFAPVVTGFIISFVSLKASAVSITIWNIVSVCIEYWLLLSVYAKIPVLSESDQ--KRSSRLATT--------NLEEGPST---SEVRPNLNSLEQYNANSLGKVTEKF---FNNSYFQAWKVYLNQDVVLPGVALALLYFTVLSFGSLMTATLQWQGIPTYVIGIARGVSATIGITATFLYPILQSRISTLRTGLWSIWSQWAFLLVCVAS----IWVKDKLKSA----------YVLMGGVALSRLGLWMFDLSVIQLMQDQVHESDRCIVGGVQNSLQAMLDLMTYIMGLIISNPQEFWELTLLSFSLVTLAAALYSIHIYRVR 514
BLAST of EWM28280.1 vs. NCBI_GenBank
Match: gi|1040907450|ref|XP_017216656.1| (PREDICTED: solute carrier family 40 member 2-like [Daucus carota subsp. sativus]) HSP 1 Score: 184.111 bits (466), Expect = 2.929e-47 Identity = 144/472 (30.51%), Postives = 232/472 (49.15%), Query Frame = 0
Query: 80 RMWEFSVIMLLTVIGPSNSFHLIATYGITVNLTVVLFSPSIGSYIDE---ANRLRAVVLVTSMQNTCVVGCCICFIIALWGHIATGWALSLCVGLIHVGGALNMLFQGLSNVILERDWVVVLAEDDDAW-LRSITTNLKAIDLSSNVVAPFLVSVIQSVGSNCAVAWTLSILNFLMIYMQYLALLRIYQEVPALAIKDRGVQRSNHDAQVGDDAVYLDKTEEGPEKGRITESHASYKRITQKFSHFFGLIESRFSAVFRNGFLHA-QIYARQRTFLPGLAMAMLYFTVLTFHNTMLAYLLSQGLHLNYVAMAQGGSAAMGVLGTLFYKWAATRFGTVCVGIMGLWQQVACLTVAVAALYVPLWRRDRHNHAEEVNVVSIATAFFMGSVGLSRLGLIAFDVAGAQLFQYLVDEESRGVVGGFQRTLESMFELLMYFLVLWRPRPDQFPSSAAFSYITVVAAALIFSFFACRVR 546
RMWEFSV + + + P S L A YG + LF P +G ++D+ L+ + + S+ G I ++ A L + I++ GA+ +L +++ER+WVVV++E L ++ + ++ IDL + AP + I S S A A +++I N + + ++Y LL +Y ++P L+ D+ +RS+ A EEGP +E + + Q ++ G + +F F N + A ++Y Q LPG+A+A+LYFTVL+F + M A L QG+ + +A+G SA +G+ T Y +R T+ G+ +W Q A L V VA+ +W +D+ A MG V LSRLGL FD++ QL Q V E R +VGG Q +L++M +L+ Y + L P +F S+ V AA ++S RVR
Sbjct: 82 RMWEFSVGLYMIDVWP-GSLLLTAAYGAVEAASTALFGPLVGQWVDKLTYKKVLQNWLFIRSVSFVVAGGTVIGVLVYPALKSDNVVAFILLIISINISGAVGVLSTLAGTILIEREWVVVISEGQPPEVLTNMNSIIRRIDLICKLFAPVVTGFIISFVSLKASAVSITIWNIVSVCIEYWLLLSVYAKIPVLSESDQ--KRSSRLATT--------NLEEGPST---SEVRPNLNSLEQYNANSLGKVTEKF---FNNSYFQAWKVYLNQDVVLPGVALALLYFTVLSFGSLMTATLQWQGIPTYVIGIARGVSATIGITATFLYPILQSRISTLRTGLWSIWSQWAFLLVCVAS----IWVKDKLKSA----------YVLMGGVALSRLGLWMFDLSVIQLMQDQVHESDRCIVGGVQNSLQAMLDLMTYIMGLIISNPQEFWELTLLSFSLVTLAAALYSIHIYRVR 522 The following BLAST results are available for this feature:
BLAST of EWM28280.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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