EWM28295.1, cds2479 (CDS) Nannochloropsis gaditana

Overview
NameEWM28295.1
Unique Namecds2479
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:500525..503260 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM28295.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100004g127.9226.mrna
GbkeyCDS
Noteencoded by transcript variant 1; alternatively spliced
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:500525..503260 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM28295.1 vs. NCBI_GenBank
Match: gi|585110640|gb|EWM28295.1| (hypothetical protein Naga_100004g127 [Nannochloropsis gaditana] >gi|585110641|gb|EWM28296.1| hypothetical protein Naga_100004g127 [Nannochloropsis gaditana])

HSP 1 Score: 1886.69 bits (4886), Expect = 0.000e+0
Identity = 911/911 (100.00%), Postives = 911/911 (100.00%), Query Frame = 0 
Query:    1 MARARSLYDMGVWSITTRDEYVSFLQSKKNLSKASIHSYCWRLETLFRALMTGKQKQGNLDRGQIRQLIEHNLEEAERLVAQDDRRSHWCLLKEFLELPSAPLCAGERGRDEQLLDSVRGVGEDEVRFPVHTLENEANKHKSISPNSFRKRNGMMAASKGKHENKVWDMELKKDYRTWLRERGVKERTCGSYCTFVHNLLRALADARKPVPYRSHRQQTTTIPITLLPTFPQSRLSHEEGKEERKREQQEEPSVLAMQDQEHHQQQISYQQPRAGQRECLHEGLQSGNAILLLASHEDSAIGDAYCYRGDRSGQEASEDNLRVAEDNEVVAMEGGEAGIVAPRREGLNRGELIELLDEQQEEAQRIVRQSKKNRYLRSFREFLGMSNHDDHIVKNSRQWTDRVGGAYKKWIGAGGANCPHARTRGYVGAARSILRVIKRKGWVQEAFGGPPLTSADICLAIEAHKEELQQICDKADDECLQAFCRYLRRPENKGDGEEEEEKDFHSSPAVSSLGIGAEDDEAAEDMGDHKIGTNPPTAVKGLHELTSTKACIHRPLKSDAGIGHMNRVVQSSEHPARCGAEEETVDNQQHEWPIFNSVGHKRKRPDTTREQGMEHRIRSLTLDLECKTRERNAALARIHALELEIQHLRDRFLSTSTPPVSAVQEGPTECQQQHTRGVEMILNHPGVTEQENIGAPGAAITHSVPGHTCGEREGGICADDRVVETNAKDEAVSFRNKMGREGERAEGDPGFLLLEADAHSNWQRRDQYDQLQRRQSVALPRAGVDLTDGKPQEEDKRQRCVFRHHVQHIEVHDQRNACDHQDMHLDDGEDQDHHLRIVGERETENLQHLHDASFACSLGLREMGEGKGDGVESRDCVGHNSRMHTIATLGLASDITERAGVEENHTIRQGW 911
            MARARSLYDMGVWSITTRDEYVSFLQSKKNLSKASIHSYCWRLETLFRALMTGKQKQGNLDRGQIRQLIEHNLEEAERLVAQDDRRSHWCLLKEFLELPSAPLCAGERGRDEQLLDSVRGVGEDEVRFPVHTLENEANKHKSISPNSFRKRNGMMAASKGKHENKVWDMELKKDYRTWLRERGVKERTCGSYCTFVHNLLRALADARKPVPYRSHRQQTTTIPITLLPTFPQSRLSHEEGKEERKREQQEEPSVLAMQDQEHHQQQISYQQPRAGQRECLHEGLQSGNAILLLASHEDSAIGDAYCYRGDRSGQEASEDNLRVAEDNEVVAMEGGEAGIVAPRREGLNRGELIELLDEQQEEAQRIVRQSKKNRYLRSFREFLGMSNHDDHIVKNSRQWTDRVGGAYKKWIGAGGANCPHARTRGYVGAARSILRVIKRKGWVQEAFGGPPLTSADICLAIEAHKEELQQICDKADDECLQAFCRYLRRPENKGDGEEEEEKDFHSSPAVSSLGIGAEDDEAAEDMGDHKIGTNPPTAVKGLHELTSTKACIHRPLKSDAGIGHMNRVVQSSEHPARCGAEEETVDNQQHEWPIFNSVGHKRKRPDTTREQGMEHRIRSLTLDLECKTRERNAALARIHALELEIQHLRDRFLSTSTPPVSAVQEGPTECQQQHTRGVEMILNHPGVTEQENIGAPGAAITHSVPGHTCGEREGGICADDRVVETNAKDEAVSFRNKMGREGERAEGDPGFLLLEADAHSNWQRRDQYDQLQRRQSVALPRAGVDLTDGKPQEEDKRQRCVFRHHVQHIEVHDQRNACDHQDMHLDDGEDQDHHLRIVGERETENLQHLHDASFACSLGLREMGEGKGDGVESRDCVGHNSRMHTIATLGLASDITERAGVEENHTIRQGW
Sbjct:    1 MARARSLYDMGVWSITTRDEYVSFLQSKKNLSKASIHSYCWRLETLFRALMTGKQKQGNLDRGQIRQLIEHNLEEAERLVAQDDRRSHWCLLKEFLELPSAPLCAGERGRDEQLLDSVRGVGEDEVRFPVHTLENEANKHKSISPNSFRKRNGMMAASKGKHENKVWDMELKKDYRTWLRERGVKERTCGSYCTFVHNLLRALADARKPVPYRSHRQQTTTIPITLLPTFPQSRLSHEEGKEERKREQQEEPSVLAMQDQEHHQQQISYQQPRAGQRECLHEGLQSGNAILLLASHEDSAIGDAYCYRGDRSGQEASEDNLRVAEDNEVVAMEGGEAGIVAPRREGLNRGELIELLDEQQEEAQRIVRQSKKNRYLRSFREFLGMSNHDDHIVKNSRQWTDRVGGAYKKWIGAGGANCPHARTRGYVGAARSILRVIKRKGWVQEAFGGPPLTSADICLAIEAHKEELQQICDKADDECLQAFCRYLRRPENKGDGEEEEEKDFHSSPAVSSLGIGAEDDEAAEDMGDHKIGTNPPTAVKGLHELTSTKACIHRPLKSDAGIGHMNRVVQSSEHPARCGAEEETVDNQQHEWPIFNSVGHKRKRPDTTREQGMEHRIRSLTLDLECKTRERNAALARIHALELEIQHLRDRFLSTSTPPVSAVQEGPTECQQQHTRGVEMILNHPGVTEQENIGAPGAAITHSVPGHTCGEREGGICADDRVVETNAKDEAVSFRNKMGREGERAEGDPGFLLLEADAHSNWQRRDQYDQLQRRQSVALPRAGVDLTDGKPQEEDKRQRCVFRHHVQHIEVHDQRNACDHQDMHLDDGEDQDHHLRIVGERETENLQHLHDASFACSLGLREMGEGKGDGVESRDCVGHNSRMHTIATLGLASDITERAGVEENHTIRQGW 911
The following BLAST results are available for this feature:
BLAST of EWM28295.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585110640|gb|EWM28295.1|0.000e+0100.00hypothetical protein Naga_100004g127 [Nannochlorop... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2487rna2487Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications