EWM28279.1, cds2469 (CDS) Nannochloropsis gaditana

Overview
NameEWM28279.1
Unique Namecds2469
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:486563..488449 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM28279.1
Productcdk5 regulatory subunit-associated protein 1
Orig transcript idgnl|cribi|Naga_100004g119.9210.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:486563..488449 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
GO:0009451RNA modification
GO:0043412macromolecule modification
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0016740transferase activity
GO:00515394 iron, 4 sulfur cluster binding
GO:0051536iron-sulfur cluster binding
GO:0003824catalytic activity
Vocabulary: INTERPRO
TermDefinition
IPR020612Methylthiotransferase_CS
IPR023970MeThioTfrase/rSAM
IPR013848Methylthiotransferase_N
IPR023404rSAM_horseshoe
IPR007197rSAM
IPR005839Methylthiotransferase
IPR002792TRAM_dom
IPR006638Elp3/MiaB/NifB
Homology
BLAST of EWM28279.1 vs. NCBI_GenBank
Match: gi|585110624|gb|EWM28279.1| (cdk5 regulatory subunit-associated protein 1 [Nannochloropsis gaditana])

HSP 1 Score: 1292.72 bits (3344), Expect = 0.000e+0
Identity = 628/628 (100.00%), Postives = 628/628 (100.00%), Query Frame = 0
Query:    1 MPPRGAPGVRTLFLCRASREYWRASNHCRRYSSSISKVTSQARRLPVDDERTLKDFLSGSRGKEGVGLATAHLQISQMSVADASTSSNNFSQPFAVNPEPKTFTIESYGCQQNVADSEVVRAIMEGANFKWVEGGRIDGHYSGCDIIFLNTCAIRDNAEKRIWGRLNHLKHPVRRSPGTGPLPGRRQARRDGRNKKPIIGLLGCMAERLKARLLEEEAVDLVVGPDAYRDLPRLLDIVEAGERGVNVQLSMDETYAEIKPARISPDQCSAFVSIMRGCNNMCSYCIVPHTRGRERSRPLRTVVEEVRRLADEGVKEVVLLGQNVNSFHDTSTVVLNGGGKYEAAEGFSNLYKSRHEAGARFIDLLDAVSRVDKDMRVRFTSPHPKDFPLPLLQLISERPSLCKALHLPAQSGSSAVLQRMRRGYTREAYLSLVQRIREIIPGVALSSDFIAGFCGETEEEHQQTLSLLRLVGYDHAFLFSYSLRERTHAAYHFEDDVPESEKQRRLSEVISTFRSIVEKRNRAEIGREHLVLVEGPSKRSTPEKPTLTGRTDTNKRCILPAREVPVSVGEEGKPLVSLQPGDYAWVRVTDAKAQTLFCDEILGRSNIQEFATDIQRTERLPRIQKVQV 628
            MPPRGAPGVRTLFLCRASREYWRASNHCRRYSSSISKVTSQARRLPVDDERTLKDFLSGSRGKEGVGLATAHLQISQMSVADASTSSNNFSQPFAVNPEPKTFTIESYGCQQNVADSEVVRAIMEGANFKWVEGGRIDGHYSGCDIIFLNTCAIRDNAEKRIWGRLNHLKHPVRRSPGTGPLPGRRQARRDGRNKKPIIGLLGCMAERLKARLLEEEAVDLVVGPDAYRDLPRLLDIVEAGERGVNVQLSMDETYAEIKPARISPDQCSAFVSIMRGCNNMCSYCIVPHTRGRERSRPLRTVVEEVRRLADEGVKEVVLLGQNVNSFHDTSTVVLNGGGKYEAAEGFSNLYKSRHEAGARFIDLLDAVSRVDKDMRVRFTSPHPKDFPLPLLQLISERPSLCKALHLPAQSGSSAVLQRMRRGYTREAYLSLVQRIREIIPGVALSSDFIAGFCGETEEEHQQTLSLLRLVGYDHAFLFSYSLRERTHAAYHFEDDVPESEKQRRLSEVISTFRSIVEKRNRAEIGREHLVLVEGPSKRSTPEKPTLTGRTDTNKRCILPAREVPVSVGEEGKPLVSLQPGDYAWVRVTDAKAQTLFCDEILGRSNIQEFATDIQRTERLPRIQKVQV
Sbjct:    1 MPPRGAPGVRTLFLCRASREYWRASNHCRRYSSSISKVTSQARRLPVDDERTLKDFLSGSRGKEGVGLATAHLQISQMSVADASTSSNNFSQPFAVNPEPKTFTIESYGCQQNVADSEVVRAIMEGANFKWVEGGRIDGHYSGCDIIFLNTCAIRDNAEKRIWGRLNHLKHPVRRSPGTGPLPGRRQARRDGRNKKPIIGLLGCMAERLKARLLEEEAVDLVVGPDAYRDLPRLLDIVEAGERGVNVQLSMDETYAEIKPARISPDQCSAFVSIMRGCNNMCSYCIVPHTRGRERSRPLRTVVEEVRRLADEGVKEVVLLGQNVNSFHDTSTVVLNGGGKYEAAEGFSNLYKSRHEAGARFIDLLDAVSRVDKDMRVRFTSPHPKDFPLPLLQLISERPSLCKALHLPAQSGSSAVLQRMRRGYTREAYLSLVQRIREIIPGVALSSDFIAGFCGETEEEHQQTLSLLRLVGYDHAFLFSYSLRERTHAAYHFEDDVPESEKQRRLSEVISTFRSIVEKRNRAEIGREHLVLVEGPSKRSTPEKPTLTGRTDTNKRCILPAREVPVSVGEEGKPLVSLQPGDYAWVRVTDAKAQTLFCDEILGRSNIQEFATDIQRTERLPRIQKVQV 628          
BLAST of EWM28279.1 vs. NCBI_GenBank
Match: gi|953500271|emb|CEG38912.1| (cdk5 regulatory subunit-associated protein 1 [Plasmopara halstedii])

HSP 1 Score: 567.385 bits (1461), Expect = 0.000e+0
Identity = 311/618 (50.32%), Postives = 400/618 (64.72%), Query Frame = 0
Query:   24 ASNHCRRYSSS----ISKVTSQARRLPVDDERTLKDFLSGSRGKEGVGLATAHLQISQMSVADASTSSNNFSQPFAVNPEPKTFTIESYGCQQNVADSEVVRAIMEGANFKWVEGGRIDGHYSGC-----DIIFLNTCAIRDNAEKRIWGRLNHLKHPVRRSPGTGPLPGRRQARRDGRNKKPIIGLLGCMAERLKARLLE-EEAVDLVVGPDAYRDLPRLLDIV-EAGERGVNVQLSMDETYAEIKPARISPDQCSAFVSIMRGCNNMCSYCIVPHTRGRERSRPLRTVVEEVRRLADEGVKEVVLLGQNVNSFHDT-STVVLNGGGKYEAAEGFSNLYKSRHEAGARFIDLLDAVSRVDKDMRVRFTSPHPKDFPLPLLQLISERPSLCKALHLPAQSGSSAVLQRMRRGYTREAYLSLVQRIREIIPGVALSSDFIAGFCGETEEEHQQTLSLLRLVGYDHAFLFSYSLRERTHAAYHFEDDVPESEKQRRLSEVISTFRSIVEKRNRAEIG-REHLVLVEGPSKRSTPEKPTLTGRTDTNKRCILPAREVPVSV----------GEEGKPL-------VSLQPGDYAWVRVTDAKAQTLFCDEILGRSNIQEFA 611
            ASN  R  SSS    I KV  ++ RLP+D    L DF+     +  V        +S+M++     S     +         +F IE+YGCQ N ADS++VRAI+              G+   C     D++ LNTCAIRDNAE +IW RL  L+              + +  R    K   +G+LGCMAERLK +LLE ++ VDLVVGPDAYRD+P LL +V  + E  VNVQLS+DETYA+I P R  P+  SAFVSIMRGCNNMCSYCIVP TRGRERSR + ++++EVR L+D GVKEV++LGQNVNS+HD  S    N G  Y +++GFSN+++SR   G RF DLLD VSRVD +MR+RFTSPHPKDFP  +L L++ERP++C  +H+PAQSGS+ +LQRMRRGY+REAYL+LV  IR  IPGVA+SSDFIAGFCGETEEEH  T+SL+R V YD AF+F+YS+R RTHAA+H +DDV +++K RRL E+I TF  +V ++N  E   R H+VLV+GPS+RST E P LTG TD++KRCI   +E+P S+            E +PL       V   PGDY  VR+ DA   TL    +  R+ +QE A
Sbjct:   13 ASNGERYKSSSSHTQIKKVQVRSSRLPIDGP-NLGDFVQTHGHQHMVD------AVSEMNIPSPIRSLEEIEKTHTC-----SFFIETYGCQMNQADSDIVRAILLK-----------HGYTPACTPDDADVVLLNTCAIRDNAEAKIWNRLESLRQL------------KAKLMRLQHKKVQTVGVLGCMAERLKKKLLESDKMVDLVVGPDAYRDIPNLLRVVLGSNESAVNVQLSLDETYADIAPVRTDPNNPSAFVSIMRGCNNMCSYCIVPFTRGRERSRVMHSIIDEVRALSDGGVKEVIMLGQNVNSYHDKKSEGAANNGRAYVSSDGFSNIFRSRDTPGFRFADLLDQVSRVDPEMRLRFTSPHPKDFPNEVLDLVNERPNICIQIHMPAQSGSTTLLQRMRRGYSREAYLALVDNIRTRIPGVAMSSDFIAGFCGETEEEHMDTISLMRQVCYDQAFMFAYSVRARTHAAHHMKDDVSKADKLRRLREIIDTFSEVVTRKNHVEDSDRLHIVLVQGPSRRSTNENPKLTGLTDSSKRCIFANQEMPPSLRSFTKQAGADANEFRPLSNFSLETVHAGPGDYVLVRIHDAGRHTLHATPV-ARTTLQEVA 594          
BLAST of EWM28279.1 vs. NCBI_GenBank
Match: gi|570995481|gb|ETP52314.1| (hypothetical protein F442_02620 [Phytophthora parasitica P10297])

HSP 1 Score: 558.525 bits (1438), Expect = 0.000e+0
Identity = 310/608 (50.99%), Postives = 395/608 (64.97%), Query Frame = 0
Query:   30 RYSSS--ISKVTSQARRLPVDDERTLKDFLSGSRGKEGVGLATAHLQISQMSVADASTSSNNFSQPFAVNP-EPKTFTIESYGCQQNVADSEVVRAIMEGANFKWVEGGRIDGHYSGCDIIFLNTCAIRDNAEKRIWGRLNHLKHPVRRSPGTGPLPGRRQARRDGRNKKPI--IGLLGCMAERLKARLLE-EEAVDLVVGPDAYRDLPRLLDIV-EAGERGVNVQLSMDETYAEIKPARISPDQCSAFVSIMRGCNNMCSYCIVPHTRGRERSRPLRTVVEEVRRLADEGVKEVVLLGQNVNSFHDT-STVVLNGGGKYEAAEGFSNLYKSRHEAGARFIDLLDAVSRVDKDMRVRFTSPHPKDFPLPLLQLISERPSLCKALHLPAQSGSSAVLQRMRRGYTREAYLSLVQRIREIIPGVALSSDFIAGFCGETEEEHQQTLSLLRLVGYDHAFLFSYSLRERTHAAYHFEDDVPESEKQRRLSEVISTFRSIVEKRNRAEIG-REHLVLVEGPSKRSTPEKPTLTGRTDTNKRCILPAREVPVS----------VGEEGKPLVSLQ-------PGDYAWVRVTDAKAQTLFCDEILGRSNIQEFA 611
            R+ SS    KV   + RLP D    L DFL  S+  +    A A  + S+M+     T+  +  +         ++F IE+YGCQ N ADSE+VRAI+    +               D++ LNTCA+RDNAE +IW RL  L+                +A+   R  K +  +G+LGCMAERLK +LLE ++ VDLVVGPDAYRD+P LL +V  +GE  VNVQLS+DETYA+I P R      SAFVSIMRGCNNMCSYCIVP TRGRERSR + ++V+EVR L+ +GVKEVVLLGQNVNS+HD  S      G  Y ++ GFSN+++SR   G RF DLLD VSRVD +MR+RFTSPHPKDFP  +L L++ERP++CK +H+PAQSGS+ +L+RMRRGY+REAYL+LV  +R  IPGVA+SSDFIAGFCGETEEEH  T+SL+R V YD AF+F+YS+R RTHAA+  EDDV +  K RRL EVI TF  +V ++N  E   R H+VLV+GPS+RST E P LTG TDT+KRC+ P +E+P S          +  E  PL S+        PGDY  VRV +A   TL    +  R+ +QE A
Sbjct:   21 RFESSGGTRKVKVLSSRLPSDGP-GLGDFLRESQTHDHQRTAEAAREPSEMNFPVPPTNMRSLEELEEEQTLRRRSFFIETYGCQMNSADSEIVRAILLDNGYTPASTA------DAADVVLLNTCAVRDNAEAKIWNRLESLRQI--------------KAKLLRRQHKEVQTVGVLGCMAERLKKKLLESDKMVDLVVGPDAYRDIPNLLRVVLGSGEAAVNVQLSLDETYADIAPVRADQHSPSAFVSIMRGCNNMCSYCIVPFTRGRERSRVMNSIVDEVRALSGQGVKEVVLLGQNVNSYHDKKSEGAAEKGRGYVSSAGFSNMFRSRDAPGFRFADLLDEVSRVDPEMRLRFTSPHPKDFPNEVLDLVNERPNICKQIHMPAQSGSTTMLERMRRGYSREAYLALVDNMRARIPGVAISSDFIAGFCGETEEEHADTISLMRQVCYDQAFMFAYSVRARTHAAHRMEDDVSQENKLRRLREVIDTFSEVVTRKNHVEDSERLHIVLVQGPSRRSTDENPKLTGLTDTSKRCVFPNQEIPGSLRAFTKQAGELASEFLPLPSVTSESVHAAPGDYVLVRVREAGRHTLHATPV-ARTTLQEVA 606          
BLAST of EWM28279.1 vs. NCBI_GenBank
Match: gi|675214121|ref|XP_008915945.1| (hypothetical protein PPTG_19284 [Phytophthora parasitica INRA-310] >gi|566031598|gb|ETI54509.1| hypothetical protein F443_02647 [Phytophthora parasitica P1569] >gi|567969312|gb|ETK94406.1| hypothetical protein L915_02529 [Phytophthora parasitica] >gi|567997703|gb|ETL47782.1| hypothetical protein L916_02501 [Phytophthora parasitica] >gi|568026925|gb|ETM00896.1| hypothetical protein L917_02435 [Phytophthora parasitica] >gi|568057405|gb|ETM54073.1| hypothetical protein L914_02524 [Phytophthora parasitica] >gi|568083747|gb|ETM98707.1| hypothetical protein PPTG_19284 [Phytophthora parasitica INRA-310] >gi|570335313|gb|ETO83261.1| hypothetical protein F444_02648 [Phytophthora parasitica P1976] >gi|570959361|gb|ETP24340.1| hypothetical protein F441_02609 [Phytophthora parasitica CJ01A1] >gi|970665548|gb|KUG02176.1| CDK5 regulatory subunit-associated protein 1 [Phytophthora nicotianae])

HSP 1 Score: 558.14 bits (1437), Expect = 0.000e+0
Identity = 307/599 (51.25%), Postives = 391/599 (65.28%), Query Frame = 0
Query:   37 KVTSQARRLPVDDERTLKDFLSGSRGKEGVGLATAHLQISQMSVADASTSSNNFSQPFAVNP-EPKTFTIESYGCQQNVADSEVVRAIMEGANFKWVEGGRIDGHYSGCDIIFLNTCAIRDNAEKRIWGRLNHLKHPVRRSPGTGPLPGRRQARRDGRNKKPI--IGLLGCMAERLKARLLE-EEAVDLVVGPDAYRDLPRLLDIV-EAGERGVNVQLSMDETYAEIKPARISPDQCSAFVSIMRGCNNMCSYCIVPHTRGRERSRPLRTVVEEVRRLADEGVKEVVLLGQNVNSFHDT-STVVLNGGGKYEAAEGFSNLYKSRHEAGARFIDLLDAVSRVDKDMRVRFTSPHPKDFPLPLLQLISERPSLCKALHLPAQSGSSAVLQRMRRGYTREAYLSLVQRIREIIPGVALSSDFIAGFCGETEEEHQQTLSLLRLVGYDHAFLFSYSLRERTHAAYHFEDDVPESEKQRRLSEVISTFRSIVEKRNRAEIG-REHLVLVEGPSKRSTPEKPTLTGRTDTNKRCILPAREVPVS----------VGEEGKPLVSLQ-------PGDYAWVRVTDAKAQTLFCDEILGRSNIQEFA 611
            KV   + RLP D    L DFL  S+  +    A A  + S+M+     T+  +  +         ++F IE+YGCQ N ADSE+VRAI+    +               D++ LNTCA+RDNAE +IW RL  L+                +A+   R  K +  +G+LGCMAERLK +LLE ++ VDLVVGPDAYRD+P LL +V  +GE  VNVQLS+DETYA+I P R      SAFVSIMRGCNNMCSYCIVP TRGRERSR + ++V+EVR L+ +GVKEVVLLGQNVNS+HD  S      G  Y ++ GFSN+++SR   G RF DLLD VSRVD +MR+RFTSPHPKDFP  +L L++ERP++CK +H+PAQSGS+ +L+RMRRGY+REAYL+LV  +R  IPGVA+SSDFIAGFCGETEEEH  T+SL+R V YD AF+F+YS+R RTHAA+  EDDV +  K RRL EVI TF  +V ++N  E   R H+VLV+GPS+RST E P LTG TDT+KRC+ P +E+P S          +  E  PL S+        PGDY  VRV +A   TL    +  R+ +QE A
Sbjct:   33 KVKVLSSRLPSDGP-GLGDFLRESQTHDHQRTAEAAREPSEMNFPVPPTNMRSLEELEEEQTLRRRSFFIETYGCQMNSADSEIVRAILLDNGYTPASTA------DAADVVLLNTCAVRDNAEAKIWNRLESLRQI--------------KAKLLRRQHKEVQTVGVLGCMAERLKKKLLESDKMVDLVVGPDAYRDIPNLLRVVLGSGEAAVNVQLSLDETYADIAPVRADQHSPSAFVSIMRGCNNMCSYCIVPFTRGRERSRVMNSIVDEVRALSGQGVKEVVLLGQNVNSYHDKKSEGAAEKGRGYVSSAGFSNMFRSRDAPGFRFADLLDEVSRVDPEMRLRFTSPHPKDFPNEVLDLVNERPNICKQIHMPAQSGSTTMLERMRRGYSREAYLALVDNMRARIPGVAISSDFIAGFCGETEEEHADTISLMRQVCYDQAFMFAYSVRARTHAAHRMEDDVSQENKLRRLREVIDTFSEVVTRKNHVEDSERLHIVLVQGPSRRSTDENPKLTGLTDTSKRCVFPNQEIPGSLRAFTKQAGELASEFLPLPSVTSESVHAAPGDYVLVRVREAGRHTLHATPV-ARTTLQEVA 609          
BLAST of EWM28279.1 vs. NCBI_GenBank
Match: gi|635365974|emb|CCI45736.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 552.747 bits (1423), Expect = 0.000e+0
Identity = 282/536 (52.61%), Postives = 363/536 (67.72%), Query Frame = 0
Query:   47 VDDERTLKDFLSGSRGKEGVGLATAHLQISQMSVADASTSSNNFSQPFA------VNPEPKTFTIESYGCQQNVADSEVVRAIMEGANFKWVEGGRIDGHYSGCDIIFLNTCAIRDNAEKRIWGRLNHLKHPVRRSPGTGPLPGRRQARRDGRNKKPIIGLLGCMAERLKARLLE-EEAVDLVVGPDAYRDLPRLLDIVEAGERGVNVQLSMDETYAEIKPARISPDQCSAFVSIMRGCNNMCSYCIVPHTRGRERSRPLRTVVEEVRRLADEGVKEVVLLGQNVNSFHDT-STVVLNGGGKYEAAEGFSNLYKSRHEAGARFIDLLDAVSRVDKDMRVRFTSPHPKDFPLPLLQLISERPSLCKALHLPAQSGSSAVLQRMRRGYTREAYLSLVQRIREIIPGVALSSDFIAGFCGETEEEHQQTLSLLRLVGYDHAFLFSYSLRERTHAAYHFEDDVPESEKQRRLSEVISTFRSIVEKRNRAEIG-REHLVLVEGPSKRSTPEKPTLTGRTDTNKRCILPAREVPVSVGEEGK 573
            V D +TL+DF+  S         +AH        +   TS  NF    A        P+ K F IE+YGCQ N ADSE+V +I+    +++ +           D+I LNTCAIR+NAE +IW RL   +           +  +    +  R   P IG+LGCMAERLK +LL+ ++ VDLVVGPDAYRDLP LL +V  G+  VNVQLS+DETYA I P R  P   SAFVSIMRGCNNMCSYCIVP TRGRERS  L +++ EV+ L D+GVKE++LLGQNVNS+HD  S +    G  Y +A+GF+N++K+R+  G RF+D+LD VS+VD +MR+RFTSPHPKDFP  +L LI ER ++C ++H+PAQSGS++VL+RMRRGYTREAYL+L + +R  IPGVA+SSDFI GFCGETEEEH  TLSL+R V +D AF+F+YSLR +THAAYH ED+VP+  K RRL E+I  F SIV K+N  E   R H+VLV+G S+RST + P LTG TDTNKRC+ P   +P S+ +  +
Sbjct:   44 VADGKTLQDFIVRSH-------LSAHPINHHHESSINETSQMNFPSNLADMDEDVEYPQVKKFYIETYGCQMNTADSEIVHSILVKNGYEFAKSPE------NADVILLNTCAIRENAESKIWNRLEQWRQ----------IKVKLLRHKSTRKYLPTIGVLGCMAERLKTKLLQCDKMVDLVVGPDAYRDLPNLLQVVRGGQSAVNVQLSLDETYAGIAPVRSDPSNPSAFVSIMRGCNNMCSYCIVPFTRGRERSCELDSIISEVKSLRDQGVKEIMLLGQNVNSYHDKQSQLAQEKGRAYVSADGFNNMFKARNTTGFRFVDVLDRVSQVDSEMRIRFTSPHPKDFPDDVLNLIQERHNICNSVHMPAQSGSTSVLERMRRGYTREAYLALAENMRARIPGVAISSDFITGFCGETEEEHLDTLSLMRRVCFDQAFMFAYSLRAKTHAAYHMEDNVPQEIKLRRLKEIIDEFSSIVTKKNLIEDSDRLHVVLVQGASRRSTDQNPKLTGLTDTNKRCVFPDVMMPTSLQQHSQ 556          
BLAST of EWM28279.1 vs. NCBI_GenBank
Match: gi|325183820|emb|CCA18278.1| (CDK5 regulatory subunitassociated protein 1 putativ [Albugo laibachii Nc14] >gi|325183990|emb|CCA18448.1| CDK5 regulatory subunitassociated protein 1 putativ [Albugo laibachii Nc14])

HSP 1 Score: 547.354 bits (1409), Expect = 0.000e+0
Identity = 284/559 (50.81%), Postives = 373/559 (66.73%), Query Frame = 0
Query:   23 RASNHCRRYSSSISKVTSQARR----LPVDDERTLKDFLSGSRGKEGVGLATAHLQISQMSVADASTSSNNFSQPFA------VNPEPKTFTIESYGCQQNVADSEVVRAIMEGANFKWVEGGRIDGHYSGCDIIFLNTCAIRDNAEKRIWGRLNHLKHPVRRSPGTGPLPGRRQARRDGRNKKPIIGLLGCMAERLKARLLE-EEAVDLVVGPDAYRDLPRLLDIVEAGERGVNVQLSMDETYAEIKPARISPDQCSAFVSIMRGCNNMCSYCIVPHTRGRERSRPLRTVVEEVRRLADEGVKEVVLLGQNVNSFHDTSTVVLNGGGK-YEAAEGFSNLYKSRHEAGARFIDLLDAVSRVDKDMRVRFTSPHPKDFPLPLLQLISERPSLCKALHLPAQSGSSAVLQRMRRGYTREAYLSLVQRIREIIPGVALSSDFIAGFCGETEEEHQQTLSLLRLVGYDHAFLFSYSLRERTHAAYHFEDDVPESEKQRRLSEVISTFRSIVEKRNRAEIG-REHLVLVEGPSKRSTPEKPTLTGRTDTNKRCILPAREVPVSV 568
            RA +   R   S+    +++R+    L   D +TL+DF+  S       L+   +   Q S+ +  TS+ NF    A         + K F IE+YGCQ N ADSE+V AI+    ++  +           D+I LNTCAIR+NAE +IW RL   +           +  +    +  RN  P +G+LGCMAERLK +LLE ++ VDLVVGPDAYRDLP LL +V  G+  VNVQLS+DETYA I P R  P   SAFVSIMRGCNNMCSYCIVP TRGRERS  L +++ EV+ L D+GVKE++LLGQNVNS+HD  +      G+ Y +A GF N++K+R+  G RF+D+LD VS+VD +MR+RFTSPHPKDFP  +L LI ER ++C ++H+PAQSGS+ VL+RMRRGY+REAYL+L + +R  IPGV++SSDFI GFCGETEEEHQ TL+L++ V +D AF+F+YSLR +THAA+  ED+VP+  K RRL E+I  F SIV ++N AE   R H+VLV+G S+RST E P LTG TDTNKRC+ P   +P S+
Sbjct:   14 RAPSKALRSQQSLFTTKAKSRKRVSSLNEADGKTLQDFIVRSH------LSAHPIDYPQESIIN-ETSAMNFPSNLADMDGNEEQTQTKNFYIETYGCQMNTADSEIVHAILVKNGYQLAKNPE------DADVILLNTCAIRENAESKIWNRLEQWRQ----------IKVKLLRHKSTRNHLPTVGVLGCMAERLKTKLLECDKMVDLVVGPDAYRDLPNLLQVVRGGQSAVNVQLSLDETYAGIVPVRSDPSNPSAFVSIMRGCNNMCSYCIVPFTRGRERSCELESIISEVKSLRDQGVKEIMLLGQNVNSYHDKQSQQAQEKGRAYVSANGFKNMFKARNATGFRFVDVLDHVSQVDSEMRIRFTSPHPKDFPDDVLDLIQERHNICNSVHMPAQSGSTTVLERMRRGYSREAYLALAENMRTRIPGVSISSDFITGFCGETEEEHQDTLTLIQRVCFDQAFMFTYSLRAKTHAAHRMEDNVPQEVKLRRLKEIIDEFSSIVTRKNLAENSDRLHVVLVQGASRRSTDENPKLTGLTDTNKRCVFPDVMMPTSL 549          
BLAST of EWM28279.1 vs. NCBI_GenBank
Match: gi|470414935|ref|XP_004336732.1| (CDK5 regulatory subunit associated protein 1, putative [Acanthamoeba castellanii str. Neff] >gi|440793540|gb|ELR14719.1| CDK5 regulatory subunit associated protein 1, putative [Acanthamoeba castellanii str. Neff])

HSP 1 Score: 543.117 bits (1398), Expect = 0.000e+0
Identity = 280/520 (53.85%), Postives = 365/520 (70.19%), Query Frame = 0
Query:   98 PEPKTFTIESYGCQQNVADSEVVRAIMEGANFKWVEGGRIDGHYSGCDIIFLNTCAIRDNAEKRIWGRLNHLKHPVRRSPGTGPLPGRRQARRDGRNKKPIIGLLGCMAERLKARLLE-EEAVDLVVGPDAYRDLPRLLDIVEAGERGVNVQLSMDETYAEIKPARISPDQCSAFVSIMRGCNNMCSYCIVPHTRGRERSRPLRTVVEEVRRLADEGVKEVVLLGQNVNSFHDTSTVVLNGGGKYEA-AEGFSNLYKSRHEAGARFIDLLDAVSRVDKDMRVRFTSPHPKDFPLPLLQLISERPSLCKALHLPAQSGSSAVLQRMRRGYTREAYLSLVQRIREIIPGVALSSDFIAGFCGETEEEHQQTLSLLRLVGYDHAFLFSYSLRERTHAAYHFEDDVPESEKQRRLSEVISTFRSIVEKRNRAEIGREHLVLVEGPSKRSTPEKPTLTGRTDTNKRCILPAREVPVSVGEEGKPL----VSLQPGDYAWVRVTDAKAQTLFCDEILGRSNIQEFA 611
            P+ K F +E+YGCQ N +DSE+V +IM+ A ++  E   +D      DIIF+NTCAIRDNAE+++W RLNH K+                 +R  +  K ++G+LGCMAERLK+RLLE ++ VDLVVGPDAYR LP LL  VE+G+  +NVQLSM+ETYA+I+P R + +  SA++SIMRGCNNMCSYCIVP TRGRERSRP+ ++++EVR+L+D+GVKEVVLLGQNVNS++D S          +  ++GF ++ K  +  G RF  L+D VSR+D +MRVRFTSPHPKDFP  LL LI+ERP+LC A+H+PAQSG+S VL  MRR YTREAYL L+QR+RE+IP V LSSDFI+GFCGETEE HQ TLSLLR V +D AF+F+YS+RE+T+A    +D+VPE  KQ+RL EVI TF + + +++R EIGR HLVLVEG S+RS+ +   L GRTD NK+ + P  +V    G          V ++PGDY  V V      TL     L R+ +  FA
Sbjct:   66 PKRKVF-METYGCQMNSSDSEIVMSIMQKAGYE--ETAALDD----ADIIFVNTCAIRDNAERKVWDRLNHFKN----------------MKRANKQSKRVVGVLGCMAERLKSRLLESDKLVDLVVGPDAYRSLPSLLTEVESGQTAMNVQLSMEETYADIRPVRTTSNNLSAYLSIMRGCNNMCSYCIVPFTRGRERSRPIASILDEVRQLSDQGVKEVVLLGQNVNSYNDLSEQTFPVSDPTQLLSKGFGSMVKP-NPGGVRFTQLMDQVSRIDPEMRVRFTSPHPKDFPDDLLHLIAERPNLCNAVHIPAQSGNSEVLHNMRRFYTREAYLELIQRMREVIPNVGLSSDFISGFCGETEEHHQDTLSLLREVRFDQAFMFAYSMREKTNAHRTLQDNVPEEVKQQRLKEVIQTFFATLAEKSREEIGRRHLVLVEGTSRRSSDD---LMGRTDNNKKVVFPNMKVDAEYGGATTGGAAAKVEVRPGDYVVVEVESTTGITLL-GRPLARTTLSRFA 557          
BLAST of EWM28279.1 vs. NCBI_GenBank
Match: gi|695443807|ref|XP_009533791.1| (hypothetical protein PHYSODRAFT_317995 [Phytophthora sojae] >gi|695469483|ref|XP_009540147.1| hypothetical protein PHYSODRAFT_536500 [Phytophthora sojae] >gi|348664547|gb|EGZ04402.1| hypothetical protein PHYSODRAFT_536500 [Phytophthora sojae] >gi|348671225|gb|EGZ11046.1| hypothetical protein PHYSODRAFT_317995 [Phytophthora sojae])

HSP 1 Score: 540.806 bits (1392), Expect = 0.000e+0
Identity = 307/612 (50.16%), Postives = 388/612 (63.40%), Query Frame = 0
Query:   25 SNHCRRYSSSI---SKVTSQARRLPVDDERTLKDFLSGSRGKEGVGLATAHLQISQMSVADASTSSNNFSQPFAVNPEPKTFTIESYGCQQNVADSEVVRAIMEGANFKWVEGGRIDGHYS-GCDIIFLNTCAIRDNAEKRIWGRLNHLKHPVRRSPGTGPLPGRRQARRDGRNKKPIIGLLGCMAERLKARLLE-EEAVDLVVGPDAYRDLPRLLDIVE-AGERGVNVQLSMDETYAEIKPARISPDQCSAFVSIMRGCNNMCSYCIVPHTRGRERSRPLRTVVEEVRRLADEGVKEVVLLGQNVNSFHDT-STVVLNGGGKYEAAEGFSNLYKSRHEAGARFIDLLDAVSRVDKDMRVRFTSPHPKDFPLPLLQLISERPSLCKALHLPAQSGSSAVLQRMRRGYTREAYLSLVQRIREIIPGVALSSDFIAGFCGETEEEHQQTLSLLRLVGYDHAFLFSYSLRERTHAAYHFEDDVPESEKQRRLSEVISTFRSIVEKRNRAEIG-REHLVLVEGPSKRSTPEKPTLTGRTDTNKRCILPAREVPVSV-------GEEGKPLVSL----------QPGDYAWVRVTDAKAQTLFCDEILGRSNIQEFA 611
            +N  R  SSS    +KV  Q+ RLP D    L DFL  S+  +    A A  + S+M          NF                       VA S +VRAI+       +EGG      +   D++ +NTCA+RDNAE +IW RL  L+           L  ++Q       K   +G+LGCMAERLK +LLE ++ VDLVVGPDAYRD+P LL +V  +GE  VNVQLS+DETYA+I P R  P   SAFVSIMRGCNNMCSYCIVP TRGRERSR + ++V+EVR L+D+GVKEVVLLGQNVNS+HD  S      G  Y ++ GFSN+++SR   G RF DLL+ VSRVD +MR+RFTSPHPKDFP  +L L++ERP++CK +H+PAQSGS+ +L+RMRRGY+REAYL+LV  +R  IPGVA+SSDFI GFCGETEEEH  T+SL+R V YD AF+F+YS+R RTHAA+  EDDVP+ +K RRL EVI TF  +V ++N  E   R H+VLV+GPS+RST E P LTG TDT+KRC+ P + +P S+       GE     + L           PGDY  VRV DA   TL    +  R+ +QE A
Sbjct:   20 ANAVRFESSSANAQAKVKVQSSRLPRDGP-GLGDFLRESQSHDHQRTAEAAREPSEM----------NFP----------------------VAPSSIVRAIL-------LEGGYSPASSADAADVVLINTCAVRDNAEAKIWNRLESLRQV------KAKLLRKKQ-------KVQTVGVLGCMAERLKTKLLESDKMVDLVVGPDAYRDIPNLLRVVHGSGEAAVNVQLSLDETYADIAPVRADPHSPSAFVSIMRGCNNMCSYCIVPFTRGRERSRVISSIVDEVRALSDQGVKEVVLLGQNVNSYHDKKSEGAAEKGRGYVSSAGFSNMFRSRDAPGFRFADLLEEVSRVDPEMRLRFTSPHPKDFPNEVLDLVNERPNICKQIHMPAQSGSTTMLERMRRGYSREAYLALVDNMRTRIPGVAISSDFITGFCGETEEEHADTISLMRQVCYDQAFMFAYSIRARTHAAHRMEDDVPQEDKLRRLREVIDTFSEVVTRKNYVEDSDRLHIVLVQGPSRRSTDEDPKLTGLTDTSKRCVFPNQAMPGSLRAFTKHAGELASQFLPLPTVSSDSVHAAPGDYVLVRVRDAGRHTLHATPV-ARTTLQEIA 577          
BLAST of EWM28279.1 vs. NCBI_GenBank
Match: gi|970660454|gb|KUF98002.1| (hypothetical protein AM588_10007301 [Phytophthora nicotianae])

HSP 1 Score: 538.11 bits (1385), Expect = 0.000e+0
Identity = 286/522 (54.79%), Postives = 358/522 (68.58%), Query Frame = 0
Query:  113 NVADSEVVRAIMEGANFKWVEGGRIDGHYSGCDIIFLNTCAIRDNAEKRIWGRLNHLKHPVRRSPGTGPLPGRRQARRDGRNKKPI--IGLLGCMAERLKARLLE-EEAVDLVVGPDAYRDLPRLLDIV-EAGERGVNVQLSMDETYAEIKPARISPDQCSAFVSIMRGCNNMCSYCIVPHTRGRERSRPLRTVVEEVRRLADEGVKEVVLLGQNVNSFHDT-STVVLNGGGKYEAAEGFSNLYKSRHEAGARFIDLLDAVSRVDKDMRVRFTSPHPKDFPLPLLQLISERPSLCKALHLPAQSGSSAVLQRMRRGYTREAYLSLVQRIREIIPGVALSSDFIAGFCGETEEEHQQTLSLLRLVGYDHAFLFSYSLRERTHAAYHFEDDVPESEKQRRLSEVISTFRSIVEKRNRAEIG-REHLVLVEGPSKRSTPEKPTLTGRTDTNKRCILPAREVPVSV-------GE---EGKPLVSLQ-------PGDYAWVRVTDAKAQTLFCDEILGRSNIQEFA 611
            N ADSE+VRAI+    +               D++ LNTCA+RDNAE +IW RL  L+                +A+   R  K +  +G+LGCMAERLK +LLE ++ VDLVVGPDAYRD+P LL +V  +GE  VNVQLS+DETYA+I P R      SAFVSIMRGCNNMCSYCIVP TRGRERSR + ++V+EVR L+ +GVKEVVLLGQNVNS+HD  S      G  Y ++ GFSN+++SR   G RF DLLD VSRVD +MR+RFTSPHPKDFP  +L L++ERP++CK +H+PAQSGS+ +L+RMRRGY+REAYL+LV  +R  IPGVA+SSDFIAGFCGETEEEH  T+SL+R V YD AF+F+YS+R RTHAA+  EDDV +  K RRL EVI TF  +V ++N  E   R H+VLV+GPS+RST E P LTG TDT+KRC+ P +E+P S+       GE   E  PL S+        PGDY  VRV +A   TL    +  R+ +QE A
Sbjct:    2 NSADSEIVRAILLDNGYTPASTA------DAADVVLLNTCAVRDNAEAKIWNRLESLRQI--------------KAKLLRRQHKEVQTVGVLGCMAERLKKKLLESDKMVDLVVGPDAYRDIPNLLRVVLGSGEAAVNVQLSLDETYADIAPVRADQHSPSAFVSIMRGCNNMCSYCIVPFTRGRERSRVMNSIVDEVRALSGQGVKEVVLLGQNVNSYHDKKSEGAAEKGRGYVSSAGFSNMFRSRDAPGFRFADLLDEVSRVDPEMRLRFTSPHPKDFPNEVLDLVNERPNICKQIHMPAQSGSTTMLERMRRGYSREAYLALVDNMRARIPGVAISSDFIAGFCGETEEEHADTISLMRQVCYDQAFMFAYSVRARTHAAHRMEDDVSQENKLRRLREVIDTFSEVVTRKNHVEDSERLHIVLVQGPSRRSTDENPKLTGLTDTSKRCVFPNQEIPGSLRAFTKQAGELASEFLPLPSVTSESVHAAPGDYVLVRVREAGRHTLHATPV-ARTTLQEVA 502          
BLAST of EWM28279.1 vs. NCBI_GenBank
Match: gi|1214699278|gb|OWZ12111.1| (CDK5 regulatory subunit-associated protein 1 [Phytophthora megakarya])

HSP 1 Score: 535.413 bits (1378), Expect = 0.000e+0
Identity = 305/631 (48.34%), Postives = 392/631 (62.12%), Query Frame = 0
Query:    3 PRGAPGVRTLFLCRASREYWRASNHCRRYSSSISKVTSQARRLPVDDERTLKDFLSGSRGKEGVGLATAHLQISQMSVADASTSSNNFSQPFAVNPEPKTFTIESYGCQQNVADSEVVRAIMEGANFKWVEGGRIDGHYS-GCDIIFLNTCAIRDNAEKRIWGRLNHLKHPVRRSPGTGPLPGRRQARRDGRNKKPIIGLLGCMAERLKARLLE-EEAVDLVVGPDAYRDLPRLLDIVE-AGERGVNVQLSMDETYAEIKPARISPDQCSAFVSIMRGCNNMCSYCIVPHTRGRERSRPLRTVVEEVRRLADEGVKEVVLLGQNVNSFHDT-STVVLNGGGKYEAAEGFSNLYKSRHEAGARFIDLLDAVSRVDKDMRVRFTSPHPKDFPLPLLQLISERPSLCKALHLPAQSGSSAVLQRMRRGYTREAYLSLVQRIREIIPGVALSSDFIAGFCGETEEEHQQTLSLLRLVGYDHAFLFSYSLRERTHAAYHFEDDVPESEKQRRLSEVISTFRSIVEKRNRAEIG-REHLVLVEGPSKRSTPEKPTLTGRTDTNKRCILPAREVPVS----------VGEEGKPLVSLQ-------PGDYAWVRVTDAKAQTLFCDEILGRSNIQEFA 611
            P G PG+        S ++  +S H +       KV  Q+ RLP D    L DFL  S+  +    A    + S+M          NF                       VA + +VRAI+       +EGG      +   D++ +NTCA+RDNAE +IW RL  L+               +Q R+  ++ +  +G+LGCMAERLK +LLE ++ VDLVVGPDAYRD+P LL +V  +GE  VNVQLS+ ETYA+I P R  P   SAFVSIMRGCNNMCSYCIVP TRGRERSR + ++V+EVR L+D+GVKEVVLLGQNVNS+HD  S      G  Y ++ GFSN+++SR   G RF DLLD VSRVD +MR+RFTSPHPKDFP  +L L++ERP++CK +H+PAQSGS+ +L+RMRRGY+REAYL+LV  +R  IPGVA+SSDFIAGFCGETEEEH  T+SL+R V YD AF+F+YS+R RTHAA+  EDDV   +K RRL EVI TF  +V ++N  E   R H+VLV+G S+RST E P LTG TDT+KRC+   +E+P S          +  E  PL S+        PGDY  VRV +A   TL    +  R+ +QE A
Sbjct:   35 PSGGPGLGDFLRESQSHDHESSSVHAK-------KVKVQSSRLPSDGP-GLGDFLRESQSHDHQRTAETAREPSEM----------NFP----------------------VAPTTIVRAIL-------LEGGYAPARTADAADVVLINTCAVRDNAEAKIWNRLEALRQI-----------KAKQLRKKQKDVQ-TVGVLGCMAERLKTKLLESDKMVDLVVGPDAYRDIPNLLHVVHGSGEAAVNVQLSLGETYADIAPVRADPHSPSAFVSIMRGCNNMCSYCIVPFTRGRERSRVMNSIVDEVRALSDQGVKEVVLLGQNVNSYHDKKSEGAAEKGRGYVSSAGFSNMFRSRDAPGFRFADLLDKVSRVDPEMRLRFTSPHPKDFPNEVLDLVNERPNICKQIHMPAQSGSTTLLERMRRGYSREAYLALVDNMRTRIPGVAISSDFIAGFCGETEEEHADTISLMRQVCYDQAFMFAYSVRARTHAAHRMEDDVSPEDKLRRLREVIDTFSEVVTRKNHVEDSDRLHVVLVQGASRRSTDEDPKLTGLTDTSKRCVFTNQEMPGSLRAFTKQAGALASEFLPLPSVSSESVRAAPGDYVLVRVHEAGRHTLHATPV-ARTTLQEVA 605          
The following BLAST results are available for this feature:
BLAST of EWM28279.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585110624|gb|EWM28279.1|0.000e+0100.00cdk5 regulatory subunit-associated protein 1 [Nann... [more]
gi|953500271|emb|CEG38912.1|0.000e+050.32cdk5 regulatory subunit-associated protein 1 [Plas... [more]
gi|570995481|gb|ETP52314.1|0.000e+050.99hypothetical protein F442_02620 [Phytophthora para... [more]
gi|675214121|ref|XP_008915945.1|0.000e+051.25hypothetical protein PPTG_19284 [Phytophthora para... [more]
gi|635365974|emb|CCI45736.1|0.000e+052.61unnamed protein product [Albugo candida][more]
gi|325183820|emb|CCA18278.1|0.000e+050.81CDK5 regulatory subunitassociated protein 1 putati... [more]
gi|470414935|ref|XP_004336732.1|0.000e+053.85CDK5 regulatory subunit associated protein 1, puta... [more]
gi|695443807|ref|XP_009533791.1|0.000e+050.16hypothetical protein PHYSODRAFT_317995 [Phytophtho... [more]
gi|970660454|gb|KUF98002.1|0.000e+054.79hypothetical protein AM588_10007301 [Phytophthora ... [more]
gi|1214699278|gb|OWZ12111.1|0.000e+048.34CDK5 regulatory subunit-associated protein 1 [Phyt... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2477rna2477Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications