EWM28258.1, cds2467 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28258.1 vs. NCBI_GenBank
Match: gi|585110603|gb|EWM28258.1| (ddb1 and cul4-associated factor 7 [Nannochloropsis gaditana]) HSP 1 Score: 807.364 bits (2084), Expect = 0.000e+0 Identity = 388/388 (100.00%), Postives = 388/388 (100.00%), Query Frame = 0
Query: 1 MVLEPSSDNPLDIISHSIRSLRVRRGNYRATSSTEPGSLYPPQTSMGDDANESKKEIYNYETSWLIFAMAWNQRTDMSNRFRIALGSYIEEYNNKIRIIERIHSSTSSANGDGSLQRVMEFDHPYPATKIMWCPDREPVSPQRDLLATTGDYLRIWNVNSGEAKLEALLNNNKNSEFCAPLTSFDWNKDDPSLLGTACIDTTCTIWDVNAQQAKTQIIAHDKEVYDIAFARGKDLFASVGADGSVRMFDLRSLVHSTIIYESPDLVPLLRLAWNRQDPNYLATIMADSTKTYLLDIRKPSSTVAELGEHQGAVNSLSWAPHSACHICTCGEDRQALIWDLSALPGPIESPILAYTAQAEINSLEWFQQSPERNWVGIGFDNRLQVLRV 388
MVLEPSSDNPLDIISHSIRSLRVRRGNYRATSSTEPGSLYPPQTSMGDDANESKKEIYNYETSWLIFAMAWNQRTDMSNRFRIALGSYIEEYNNKIRIIERIHSSTSSANGDGSLQRVMEFDHPYPATKIMWCPDREPVSPQRDLLATTGDYLRIWNVNSGEAKLEALLNNNKNSEFCAPLTSFDWNKDDPSLLGTACIDTTCTIWDVNAQQAKTQIIAHDKEVYDIAFARGKDLFASVGADGSVRMFDLRSLVHSTIIYESPDLVPLLRLAWNRQDPNYLATIMADSTKTYLLDIRKPSSTVAELGEHQGAVNSLSWAPHSACHICTCGEDRQALIWDLSALPGPIESPILAYTAQAEINSLEWFQQSPERNWVGIGFDNRLQVLRV
Sbjct: 1 MVLEPSSDNPLDIISHSIRSLRVRRGNYRATSSTEPGSLYPPQTSMGDDANESKKEIYNYETSWLIFAMAWNQRTDMSNRFRIALGSYIEEYNNKIRIIERIHSSTSSANGDGSLQRVMEFDHPYPATKIMWCPDREPVSPQRDLLATTGDYLRIWNVNSGEAKLEALLNNNKNSEFCAPLTSFDWNKDDPSLLGTACIDTTCTIWDVNAQQAKTQIIAHDKEVYDIAFARGKDLFASVGADGSVRMFDLRSLVHSTIIYESPDLVPLLRLAWNRQDPNYLATIMADSTKTYLLDIRKPSSTVAELGEHQGAVNSLSWAPHSACHICTCGEDRQALIWDLSALPGPIESPILAYTAQAEINSLEWFQQSPERNWVGIGFDNRLQVLRV 388
BLAST of EWM28258.1 vs. NCBI_GenBank
Match: gi|1072237569|gb|OEU22296.1| (hypothetical protein FRACYDRAFT_179515 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 449.514 bits (1155), Expect = 9.786e-155 Identity = 217/348 (62.36%), Postives = 273/348 (78.45%), Query Frame = 0
Query: 46 MGDDANES--KKEIYNYETSWLIFAMAWNQRTDMSNRFRIALGSYIEEYNNKIRIIERIHSSTSSANGDGSLQRVMEFDHPYPATKIMWCPDREPVSPQRDLLATTGDYLRIWNVN---SGEAKLEALLNNNKNSEFCAPLTSFDWNKDDPSLLGTACIDTTCTIWDVNAQQAKTQIIAHDKEVYDIAFARGKDLFASVGADGSVRMFDLRSLVHSTIIYESPDLVPLLRLAWNRQDPNYLATIMADSTKTYLLDIRKPSSTVAELGEHQGAVNSLSWAPHSACHICTCGEDRQALIWDLSALPG-PIESPILAYTAQAEINSLEWFQQSPERNWVGIGFDNRLQVLR 387
M D+ N +KEIY Y+ W I++++W++R D +++FR+A+GSY+E+Y+N + II++ S+++ GSL + EFDHPYP TKIMW PD S +DLLATTGDYLRIWNV+ SG K EALLNNNK SE+CAPLTSFDWN+ DPS++GT+ IDTT TIWDVN A+TQ+IAHD+EV+D+AFARGKD+FASVGADGSVRMFDLRSLV+STIIYESPDL PLLRL WN+QDPNY+AT M DS KT +LDIR PS VAELG H G+VN+ +WAPHS+CHICT G+D QALIWDLS +P P++ PILAY A EIN+L+W P+ WV I FD++LQ+ +
Sbjct: 1 MADNGNSQSQRKEIYTYKAPWPIYSLSWSRRPDPTSQFRLAIGSYLEQYSNVVSIIKK----NSASDDLGSLYQAAEFDHPYPCTKIMWSPDTRHGS--QDLLATTGDYLRIWNVSDDGSGTVKKEALLNNNKTSEYCAPLTSFDWNETDPSIIGTSSIDTTVTIWDVNTSTARTQLIAHDREVFDLAFARGKDVFASVGADGSVRMFDLRSLVNSTIIYESPDLEPLLRLEWNKQDPNYMATFMGDSKKTIILDIRVPSLPVAELGGHWGSVNATAWAPHSSCHICTAGDDSQALIWDLSTMPKRPVDDPILAYNADGEINNLQWSASQPD--WVSIAFDDKLQICK 340
BLAST of EWM28258.1 vs. NCBI_GenBank
Match: gi|1210511388|dbj|GAX29526.1| (WD repeat-containing protein 68 [Fistulifera solaris]) HSP 1 Score: 447.203 bits (1149), Expect = 4.078e-154 Identity = 212/343 (61.81%), Postives = 265/343 (77.26%), Query Frame = 0
Query: 48 DDANESKKEIYNYETSWLIFAMAWNQRTDMSNRFRIALGSYIEEYNNKIRIIERIHSSTSSANGDGSLQRVMEFDHPYPATKIMWCPDREPVSPQRDLLATTGDYLRIWNVNSG-EAKLEALLNNNKNSEFCAPLTSFDWNKDDPSLLGTACIDTTCTIWDVNAQQAKTQIIAHDKEVYDIAFARGKDLFASVGADGSVRMFDLRSLVHSTIIYESPDLVPLLRLAWNRQDPNYLATIMADSTKTYLLDIRKPSSTVAELGEHQGAVNSLSWAPHSACHICTCGEDRQALIWDLSALPG-PIESPILAYTAQAEINSLEWFQQSPERNWVGIGFDNRLQVLRV 388
D+ + +KEIY Y W ++++AW++R D+ ++FR+A+GSY+E+Y+N ++IIE+ H S +G SL + EFDHPYP TKI+W P RDLLATTGDYLR+W+V G K E LLNNNK SE+CAPLTSFDWN+ D +++GT+ IDTTCTIWD+ AQ+AKTQ+IAHD+EV+DIAFARGKD+FASVGADGSVRMFDLRSL HSTIIYESP+L LLRL WN+QDPNYLAT M DS +T +LDIR PS VAELG H G VN+ +WAPHS+CHICT G+D QALIWDLS++ P+E PILAY A EIN+L W P+ WV I F ++LQ+LRV
Sbjct: 6 DEGSAPRKEIYTYTAPWTVYSLAWSRRQDIRSQFRLAIGSYVEQYSNGVQIIEKQHRSADDDDGLTSLYKTGEFDHPYPCTKILW----SPAVNGRDLLATTGDYLRVWSVQEGMNPKKECLLNNNKTSEYCAPLTSFDWNETDHNIVGTSSIDTTCTIWDIEAQKAKTQLIAHDREVFDIAFARGKDVFASVGADGSVRMFDLRSLEHSTIIYESPNLDALLRLEWNKQDPNYLATFMVDSRRTIILDIRVPSIPVAELGGHMGCVNAAAWAPHSSCHICTVGDDNQALIWDLSSMSKRPVEDPILAYNAAGEINNLHWSAARPD--WVSIAFHDKLQILRV 342
BLAST of EWM28258.1 vs. NCBI_GenBank
Match: gi|857979117|emb|CEO95355.1| (hypothetical protein PBRA_004121 [Plasmodiophora brassicae]) HSP 1 Score: 446.432 bits (1147), Expect = 4.862e-154 Identity = 214/336 (63.69%), Postives = 257/336 (76.49%), Query Frame = 0
Query: 54 KKEIYNYETSWLIFAMAWNQRTDMSNRFRIALGSYIEEYNNKIRIIERIHSSTSSANGDGSLQRVMEFDHPYPATKIMWCPDREPVSPQRDLLATTGDYLRIWNV-NSGEAKLEALLNNNKNSEFCAPLTSFDWNKDDPSLLGTACIDTTCTIWDVNAQQAKTQIIAHDKEVYDIAFARGKDLFASVGADGSVRMFDLRSLVHSTIIYESPDLVPLLRLAWNRQDPNYLATIMADSTKTYLLDIRKPSSTVAELGEHQGAVNSLSWAPHSACHICTCGEDRQALIWDLSALPGPIESPILAYTAQAEINSLEWFQQSPERNWVGIGFDNRLQVLRV 388
KKEIY Y+ W+++AM W+ R S +FR+A+GS+IEEY NKI +I+ G + FDHPYP+TKI+W PD+ V DLLATTGDYLR+W+V G + LLNNNKNSEFCAPLTSFDWN+ DP+L+GT+ IDTTCTIW+V QQA+TQ+IAHDKEVYDIAFA +D+FASVGADGSVRMFDLRSL HSTIIYESPDLVPLLRL WN+QD NYLATI+ D +K +LDIR PS VAEL H VNS++WAPHS+CHICT G+D QALIWDLS +P PI+ PILAYTA AE+N+L+W P+ WVGI FD +LQ+LRV
Sbjct: 8 KKEIYTYDAPWVVYAMNWSVRA--SQKFRLAIGSFIEEYTNKIEVIQLNEEM-------GKFECTATFDHPYPSTKIIWAPDK--VGTGDDLLATTGDYLRLWSVAEDGSVSQKCLLNNNKNSEFCAPLTSFDWNETDPTLVGTSSIDTTCTIWNVETQQARTQLIAHDKEVYDIAFAPSQDVFASVGADGSVRMFDLRSLEHSTIIYESPDLVPLLRLGWNKQDHNYLATILMDQSKVVILDIRAPSLPVAELKGHSSCVNSIAWAPHSSCHICTAGDDSQALIWDLSQMPKPIDDPILAYTAAAEVNTLQWSSSQPD--WVGIAFDQKLQILRV 330
BLAST of EWM28258.1 vs. NCBI_GenBank
Match: gi|1210527829|dbj|GAX13467.1| (WD repeat-containing protein 68 [Fistulifera solaris]) HSP 1 Score: 445.277 bits (1144), Expect = 1.884e-153 Identity = 211/343 (61.52%), Postives = 265/343 (77.26%), Query Frame = 0
Query: 48 DDANESKKEIYNYETSWLIFAMAWNQRTDMSNRFRIALGSYIEEYNNKIRIIERIHSSTSSANGDGSLQRVMEFDHPYPATKIMWCPDREPVSPQRDLLATTGDYLRIWNVNSG-EAKLEALLNNNKNSEFCAPLTSFDWNKDDPSLLGTACIDTTCTIWDVNAQQAKTQIIAHDKEVYDIAFARGKDLFASVGADGSVRMFDLRSLVHSTIIYESPDLVPLLRLAWNRQDPNYLATIMADSTKTYLLDIRKPSSTVAELGEHQGAVNSLSWAPHSACHICTCGEDRQALIWDLSALPG-PIESPILAYTAQAEINSLEWFQQSPERNWVGIGFDNRLQVLRV 388
D+ + +KEIY Y W ++++AW++R D+ ++FR+A+GSY+E+Y+N ++IIE+ H + +G SL + EFDHPYP TKI+W P RDLLATTGDYLR+W+V G K E LLNNNK SE+CAPLTSFDWN+ D +++GT+ IDTTCTIWD+ AQ+AKTQ+IAHD+EV+DIAFARGKD+FASVGADGSVRMFDLRSL HSTIIYESP+L LLRL WN+QDPNYLAT M DS +T +LDIR PS VAELG H G VN+ +WAPHS+CHICT G+D QALIWDLS++ P+E PILAY A EIN+L W P+ WV I F ++LQ+LRV
Sbjct: 6 DEGSAPRKEIYTYTAPWTVYSLAWSRRQDIRSQFRLAIGSYVEQYSNGVQIIEKQHRNADDDDGLTSLYKTGEFDHPYPCTKILW----NPAVNGRDLLATTGDYLRVWSVQEGMNPKKECLLNNNKTSEYCAPLTSFDWNETDHNIVGTSSIDTTCTIWDIEAQKAKTQLIAHDREVFDIAFARGKDVFASVGADGSVRMFDLRSLEHSTIIYESPNLDALLRLEWNKQDPNYLATFMVDSRRTIILDIRVPSIPVAELGGHMGCVNAAAWAPHSSCHICTVGDDNQALIWDLSSMSKRPVEDPILAYNAAGEINNLHWSAARPD--WVSIAFHDKLQILRV 342
BLAST of EWM28258.1 vs. NCBI_GenBank
Match: gi|219123489|ref|XP_002182056.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217406657|gb|EEC46596.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 445.277 bits (1144), Expect = 2.032e-153 Identity = 211/346 (60.98%), Postives = 266/346 (76.88%), Query Frame = 0
Query: 54 KKEIYNYETSWLIFAMAWNQRTDMSNRFRIALGSYIEEYNNKIRIIERIHSSTSS---ANGDGSLQRVMEFDHPYPATKIMWCPDREPVSPQRDLLATTGDYLRIWNV---NSGEA----KLEALLNNNKNSEFCAPLTSFDWNKDDPSLLGTACIDTTCTIWDVNAQQAKTQIIAHDKEVYDIAFARGKDLFASVGADGSVRMFDLRSLVHSTIIYESPDLVPLLRLAWNRQDPNYLATIMADSTKTYLLDIRKPSSTVAELGEHQGAVNSLSWAPHSACHICTCGEDRQALIWDLSALPG-PIESPILAYTAQAEINSLEWFQQSPERNWVGIGFDNRLQVLRV 388
+KEIY Y W +F+MAW++R D +++FR+A+GSY+E+Y+N ++I++++ S G SL + FDHPYP TKI+W PD+ +P DLLATTGDYLR+WN+ SG+ K E LLNNNK SE+CAPLTSFDWN+ DP+++GT+ IDTTCTIWD+ Q A+TQ+IAHD+EV+D+AFARGKD+FASVGADGSVRMFDLRSL HSTIIYESP+L PLLRL WN+QDPNYLAT M DS +T +LDIR PS VAELG H G VN+ +WAPHS+CHICT G+D QALIWDLSA+ P+E PILAY A EIN+L+W P+ WV I F ++LQ+LRV
Sbjct: 5 RKEIYTYAAPWTVFSMAWSRRQDKTSQFRLAIGSYVEQYSNAVQIVKKVPQHVDSDFAGGGSASLYQAGSFDHPYPCTKILWSPDQSLAAP--DLLATTGDYLRVWNIRDDGSGQGTVQCKKECLLNNNKTSEYCAPLTSFDWNEADPNIVGTSSIDTTCTIWDIETQTARTQLIAHDREVFDLAFARGKDVFASVGADGSVRMFDLRSLEHSTIIYESPNLDPLLRLEWNKQDPNYLATFMVDSRRTVILDIRVPSLPVAELGGHLGCVNATAWAPHSSCHICTAGDDSQALIWDLSAMSKRPVEEPILAYNASGEINNLQWSASQPD--WVSIAFHDKLQILRV 346
BLAST of EWM28258.1 vs. NCBI_GenBank
Match: gi|676383281|ref|XP_009034919.1| (hypothetical protein AURANDRAFT_52888 [Aureococcus anophagefferens] >gi|323454218|gb|EGB10088.1| hypothetical protein AURANDRAFT_52888 [Aureococcus anophagefferens]) HSP 1 Score: 441.81 bits (1135), Expect = 2.325e-151 Identity = 209/368 (56.79%), Postives = 266/368 (72.28%), Query Frame = 0
Query: 54 KKEIYNYETSWLIFAMAWNQRTDMSNRFRIALGSYIEEYNNKIRIIER-----------------------IHSSTSSANGDGSLQRVMEFDHPYPATKIMWCPDREPVSPQRDLLATTGDYLRIWNV----------NSGEAKLEALLNNNKNSEFCAPLTSFDWNKDDPSLLGTACIDTTCTIWDVNAQQAKTQIIAHDKEVYDIAFARGKDLFASVGADGSVRMFDLRSLVHSTIIYESPDLVPLLRLAWNRQDPNYLATIMADSTKTYLLDIRKPSSTVAELGEHQGAVNSLSWAPHSACHICTCGEDRQALIWDLSALPGPIESPILAYTAQAEINSLEWFQQSPERNWVGIGFDNRLQVLRV 388
KKEIY ++ W I+AMAW+QR + FR+ALGS++EEY N++ I++R H+ +A+ + + V EF+HPYPATKIMW PDR + +RDLLATTGDYLR+W+V ++ ++ ALLNNNKNSE+CAPLTSFDWN +PSL+GT+ IDTTCTIWD++ KTQ+IAHDKEVYDIAFARGKD+FASVGADGSVR+FDLR+L HSTIIYE+ L PLLRLAWN+QDPNYLA I+AD +T +LD+R PS VAELG HQ VNS++WAPHS+CH+CTC +D QALIWDL+A+P PI+ PILAYTA AE+N L+W + WV I ++ +Q+L V
Sbjct: 22 KKEIYTHDADWTIYAMAWSQRDEPERGFRLALGSFVEEYANRVSIVQRRDAYEKCVGTGVGRDRTAAALQRAHNPGKAADSEAAFVTVGEFEHPYPATKIMWSPDR---TSRRDLLATTGDYLRVWSVPDQREASDAESASSVEMVALLNNNKNSEYCAPLTSFDWNDTEPSLVGTSSIDTTCTIWDLSVPAVKTQLIAHDKEVYDIAFARGKDIFASVGADGSVRLFDLRTLEHSTIIYETSSLRPLLRLAWNKQDPNYLAAILADDPRTVILDVRVPSIPVAELGAHQACVNSIAWAPHSSCHLCTCSDDNQALIWDLTAMPKPIDDPILAYTADAEVNQLQW--STAHHEWVAIAYNTTMQMLHV 384
BLAST of EWM28258.1 vs. NCBI_GenBank
Match: gi|551660884|ref|XP_005833209.1| (hypothetical protein GUITHDRAFT_86758 [Guillardia theta CCMP2712] >gi|428177349|gb|EKX46229.1| hypothetical protein GUITHDRAFT_86758 [Guillardia theta CCMP2712]) HSP 1 Score: 424.861 bits (1091), Expect = 1.692e-145 Identity = 212/344 (61.63%), Postives = 251/344 (72.97%), Query Frame = 0
Query: 54 KKEIYNYETSWLIFAMAWNQRTDMSNRFRIALGSYIEEYNNKIRIIERIHSSTSSANGDGSLQRVMEFDHPYPATKIMWCPDREPVSPQRDLLATTGDYLRIWNVNSGE------AKLEALLNNNKNSEFCAPLTSFDWNKDDPSLLGTACIDTTCTIWDVNAQQAKTQIIAHDKEVYDIAFARGKDLFASVGADGSVRMFDLRSLVHSTIIYES---PDLVPLLRLAWNRQDPNYLATIMADSTKTYLLDIRKPSSTVAELGEHQGAVNSLSWAPHSACHICTCGEDRQALIWDLSALPGPIESPILAYTAQAEINSLEWFQQSPERNWVGIGFDNRLQVLRV 388
KKEI+ YE W I+ M+W+ R D RFRIA+GS+IEEY+NK++II+ G Q FDHPYP TKIMW PD+ V Q+DLLATTGDYLR+W V SG ++ LLNNNKNSEFCAPLTSFDWN DPS++GT+ IDTTCTIW++ QAKTQ+IAHDKEVYDIAFA G ++FASVGADGSVR+FDLRSL HSTIIYES PD PLLRLAWN+QD NYLAT M D+T +LDIR PS VAEL H+ +VN+++WAPHS CHIC+ G+D ALIWDL ALP IE PILAY A EIN L+W P+ WV IGF ++Q+LRV
Sbjct: 7 KKEIFTYEAPWEIYGMSWSVRPD--KRFRIAVGSFIEEYSNKVQIIQL-------NENKGQFQETAIFDHPYPTTKIMWIPDK--VGTQKDLLATTGDYLRLWEVQSGASSSNSSVAMKKLLNNNKNSEFCAPLTSFDWNDTDPSIIGTSSIDTTCTIWNIETGQAKTQLIAHDKEVYDIAFACGTEVFASVGADGSVRLFDLRSLEHSTIIYESSTPPDAPPLLRLAWNKQDTNYLATFMMDNTSVVILDIRVPSLPVAELQGHEQSVNAIAWAPHSHCHICSAGDDAHALIWDLQALPRAIEDPILAYKAMGEINQLQWSASQPD--WVAIGFGQQMQILRV 337
BLAST of EWM28258.1 vs. NCBI_GenBank
Match: gi|551545513|ref|XP_005760730.1| (hypothetical protein EMIHUDRAFT_459986 [Emiliania huxleyi CCMP1516] >gi|551550292|ref|XP_005762676.1| hypothetical protein EMIHUDRAFT_452725 [Emiliania huxleyi CCMP1516] >gi|485609290|gb|EOD08301.1| hypothetical protein EMIHUDRAFT_459986 [Emiliania huxleyi CCMP1516] >gi|485611782|gb|EOD10247.1| hypothetical protein EMIHUDRAFT_452725 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 421.779 bits (1083), Expect = 4.388e-144 Identity = 211/357 (59.10%), Postives = 261/357 (73.11%), Query Frame = 0
Query: 38 SLYPPQTSMGDDANESKKEIYNYETSWLIFAMAWNQRTDMSNRFRIALGSYIEEYNNKIRIIERIHSSTSSANGDGSLQRVMEFDHPYPATKIMWCPDREPVSPQRDLLATTGDYLRIWNV-NSGEAKLEALLNNNKNSEFCAPLTSFDWNKDDPSLLGTACIDTTCTIWDVNAQQAKTQIIAHDKEVYDIAFARGKDLFASVGADGSVRMFDLRSLVHSTIIYESPD-----LVPLLRLAWNRQDPNYLATIMADSTKTYLLDIRKPSSTVAELGEHQGAVNSLSWAPHSACHICTCGEDRQALIWDLSALPGPIESPILAYTAQAEINSLEWFQQSPERNWVGIGFDNRLQVLRV 388
S+ P Q+S +KEIY Y WL++ M W+ R D RFR+A+GS+ EEY+N +RII+ ++ T N V +F+HPYPATK+MW PD +RDLLATTGDYLRIWNV ++ +L+ LLNNNKN+EFCAPLTSFDWN+ DP+++GT+ IDTTCTIWDV QAKTQ+IAHDKEVYD+AFA G +FASVGADGSVRMFDLRSL HSTIIYES D +PL+RLAWN+QDPNYLATI DS K +LDIR PS A L H VN++SWAPHS+CH+CT G+D QALIWDLS +P IE PILAY A++E+N ++W + P+ WV I FD +LQ+LRV
Sbjct: 5 SVAPAQSSA------KRKEIYTYTAPWLLYGMNWSVRAD--QRFRLAVGSFEEEYSNSVRIIQ-LNEETHEFN------EVAQFEHPYPATKMMWIPDAN--GARRDLLATTGDYLRIWNVVDNKSVRLDGLLNNNKNTEFCAPLTSFDWNETDPNIIGTSSIDTTCTIWDVTQMQAKTQLIAHDKEVYDLAFAAGVHVFASVGADGSVRMFDLRSLEHSTIIYESSDGQGGSPLPLIRLAWNKQDPNYLATITMDSNKVAILDIRVPSLPAATLEGHSQCVNAVSWAPHSSCHVCTSGDDNQALIWDLSPMPSRIEDPILAYYAESEVNQVQWSKTQPD--WVAICFDKKLQILRV 342
BLAST of EWM28258.1 vs. NCBI_GenBank
Match: gi|470439196|ref|XP_004339158.1| (WD40 repeat protein [Acanthamoeba castellanii str. Neff] >gi|440796036|gb|ELR17145.1| WD40 repeat protein [Acanthamoeba castellanii str. Neff]) HSP 1 Score: 421.009 bits (1081), Expect = 4.773e-144 Identity = 207/342 (60.53%), Postives = 251/342 (73.39%), Query Frame = 0
Query: 48 DDANESKKEIYNYETSWLIFAMAWNQRTDMSNRFRIALGSYIEEYNNKIRIIERIHSSTSSANGDGSLQRVMEFDHPYPATKIMWCPDREPVSPQRDLLATTGDYLRIWNVN-SGEAKLEALLNNNKNSEFCAPLTSFDWNKDDPSLLGTACIDTTCTIWDVNAQQAKTQIIAHDKEVYDIAFARGKDLFASVGADGSVRMFDLRSLVHSTIIYESPDLVPLLRLAWNRQDPNYLATIMADSTKTYLLDIRKPSSTVAELGEHQGAVNSLSWAPHSACHICTCGEDRQALIWDLSALPGPIESPILAYTAQAEINSLEWFQQSPERNWVGIGFDNRLQVLRV 388
DDA KKEIY Y+ WLI+ M W+ R D +FR+ALGS++E+Y NK+ I++ + G + EF HPYPATKIMW PDR V + DLL TTGDY+R+W V SG+ L+ LLNNNKNSEFCAPLTSFDWN +P++LGT+ IDTTCTIWD+ Q A TQ+IAHDKEVYDIAFARG DLFASVGADGSVRMFDLR+L HSTIIYESP+ LLRL WNRQD YL+TI DS K +LDIR PS AEL H +NSL+WAPHS+CH+ T G+D ALIWDLS++P PIE PILAY A+AE+N L+W P+ W+ I F +++Q+LRV
Sbjct: 5 DDAR--KKEIYTYQAPWLIYGMNWSVRPD--KKFRLALGSFLEDYTNKVSIVQLNEDT-------GEFVQTGEFKHPYPATKIMWIPDR--VGDKPDLLGTTGDYMRLWQVGESGDVSLKCLLNNNKNSEFCAPLTSFDWNTTNPNILGTSSIDTTCTIWDIERQSAITQLIAHDKEVYDIAFARGTDLFASVGADGSVRMFDLRNLEHSTIIYESPEQSSLLRLCWNRQDDYYLSTISMDSNKVIILDIRVPSLPAAELTGHSSCINSLAWAPHSSCHLATAGDDSSALIWDLSSMPKPIEDPILAYNAEAEVNQLQWSLGQPD--WISIAFASKMQILRV 331 The following BLAST results are available for this feature:
BLAST of EWM28258.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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