EWM28258.1, cds2467 (CDS) Nannochloropsis gaditana

Overview
NameEWM28258.1
Unique Namecds2467
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:478335..478502 +
Alignment locationCM002459.1:478883..479227 +
Alignment locationCM002459.1:479381..479549 +
Alignment locationCM002459.1:479723..480207 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM28258.1
Productddb1 and cul4-associated factor 7
Orig transcript idgnl|cribi|Naga_100004g117.9189.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:478335..478502 +
CM002459.1supercontigCM002459.1:478883..479227 +
CM002459.1supercontigCM002459.1:479381..479549 +
CM002459.1supercontigCM002459.1:479723..480207 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR017986WD40_repeat_dom
IPR019775WD40_repeat_CS
IPR015943WD40/YVTN_repeat-like_dom
IPR001680WD40_repeat
Homology
BLAST of EWM28258.1 vs. NCBI_GenBank
Match: gi|585110603|gb|EWM28258.1| (ddb1 and cul4-associated factor 7 [Nannochloropsis gaditana])

HSP 1 Score: 807.364 bits (2084), Expect = 0.000e+0
Identity = 388/388 (100.00%), Postives = 388/388 (100.00%), Query Frame = 0
Query:    1 MVLEPSSDNPLDIISHSIRSLRVRRGNYRATSSTEPGSLYPPQTSMGDDANESKKEIYNYETSWLIFAMAWNQRTDMSNRFRIALGSYIEEYNNKIRIIERIHSSTSSANGDGSLQRVMEFDHPYPATKIMWCPDREPVSPQRDLLATTGDYLRIWNVNSGEAKLEALLNNNKNSEFCAPLTSFDWNKDDPSLLGTACIDTTCTIWDVNAQQAKTQIIAHDKEVYDIAFARGKDLFASVGADGSVRMFDLRSLVHSTIIYESPDLVPLLRLAWNRQDPNYLATIMADSTKTYLLDIRKPSSTVAELGEHQGAVNSLSWAPHSACHICTCGEDRQALIWDLSALPGPIESPILAYTAQAEINSLEWFQQSPERNWVGIGFDNRLQVLRV 388
            MVLEPSSDNPLDIISHSIRSLRVRRGNYRATSSTEPGSLYPPQTSMGDDANESKKEIYNYETSWLIFAMAWNQRTDMSNRFRIALGSYIEEYNNKIRIIERIHSSTSSANGDGSLQRVMEFDHPYPATKIMWCPDREPVSPQRDLLATTGDYLRIWNVNSGEAKLEALLNNNKNSEFCAPLTSFDWNKDDPSLLGTACIDTTCTIWDVNAQQAKTQIIAHDKEVYDIAFARGKDLFASVGADGSVRMFDLRSLVHSTIIYESPDLVPLLRLAWNRQDPNYLATIMADSTKTYLLDIRKPSSTVAELGEHQGAVNSLSWAPHSACHICTCGEDRQALIWDLSALPGPIESPILAYTAQAEINSLEWFQQSPERNWVGIGFDNRLQVLRV
Sbjct:    1 MVLEPSSDNPLDIISHSIRSLRVRRGNYRATSSTEPGSLYPPQTSMGDDANESKKEIYNYETSWLIFAMAWNQRTDMSNRFRIALGSYIEEYNNKIRIIERIHSSTSSANGDGSLQRVMEFDHPYPATKIMWCPDREPVSPQRDLLATTGDYLRIWNVNSGEAKLEALLNNNKNSEFCAPLTSFDWNKDDPSLLGTACIDTTCTIWDVNAQQAKTQIIAHDKEVYDIAFARGKDLFASVGADGSVRMFDLRSLVHSTIIYESPDLVPLLRLAWNRQDPNYLATIMADSTKTYLLDIRKPSSTVAELGEHQGAVNSLSWAPHSACHICTCGEDRQALIWDLSALPGPIESPILAYTAQAEINSLEWFQQSPERNWVGIGFDNRLQVLRV 388          
BLAST of EWM28258.1 vs. NCBI_GenBank
Match: gi|1072237569|gb|OEU22296.1| (hypothetical protein FRACYDRAFT_179515 [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 449.514 bits (1155), Expect = 9.786e-155
Identity = 217/348 (62.36%), Postives = 273/348 (78.45%), Query Frame = 0
Query:   46 MGDDANES--KKEIYNYETSWLIFAMAWNQRTDMSNRFRIALGSYIEEYNNKIRIIERIHSSTSSANGDGSLQRVMEFDHPYPATKIMWCPDREPVSPQRDLLATTGDYLRIWNVN---SGEAKLEALLNNNKNSEFCAPLTSFDWNKDDPSLLGTACIDTTCTIWDVNAQQAKTQIIAHDKEVYDIAFARGKDLFASVGADGSVRMFDLRSLVHSTIIYESPDLVPLLRLAWNRQDPNYLATIMADSTKTYLLDIRKPSSTVAELGEHQGAVNSLSWAPHSACHICTCGEDRQALIWDLSALPG-PIESPILAYTAQAEINSLEWFQQSPERNWVGIGFDNRLQVLR 387
            M D+ N    +KEIY Y+  W I++++W++R D +++FR+A+GSY+E+Y+N + II++     S+++  GSL +  EFDHPYP TKIMW PD    S  +DLLATTGDYLRIWNV+   SG  K EALLNNNK SE+CAPLTSFDWN+ DPS++GT+ IDTT TIWDVN   A+TQ+IAHD+EV+D+AFARGKD+FASVGADGSVRMFDLRSLV+STIIYESPDL PLLRL WN+QDPNY+AT M DS KT +LDIR PS  VAELG H G+VN+ +WAPHS+CHICT G+D QALIWDLS +P  P++ PILAY A  EIN+L+W    P+  WV I FD++LQ+ +
Sbjct:    1 MADNGNSQSQRKEIYTYKAPWPIYSLSWSRRPDPTSQFRLAIGSYLEQYSNVVSIIKK----NSASDDLGSLYQAAEFDHPYPCTKIMWSPDTRHGS--QDLLATTGDYLRIWNVSDDGSGTVKKEALLNNNKTSEYCAPLTSFDWNETDPSIIGTSSIDTTVTIWDVNTSTARTQLIAHDREVFDLAFARGKDVFASVGADGSVRMFDLRSLVNSTIIYESPDLEPLLRLEWNKQDPNYMATFMGDSKKTIILDIRVPSLPVAELGGHWGSVNATAWAPHSSCHICTAGDDSQALIWDLSTMPKRPVDDPILAYNADGEINNLQWSASQPD--WVSIAFDDKLQICK 340          
BLAST of EWM28258.1 vs. NCBI_GenBank
Match: gi|1210511388|dbj|GAX29526.1| (WD repeat-containing protein 68 [Fistulifera solaris])

HSP 1 Score: 447.203 bits (1149), Expect = 4.078e-154
Identity = 212/343 (61.81%), Postives = 265/343 (77.26%), Query Frame = 0
Query:   48 DDANESKKEIYNYETSWLIFAMAWNQRTDMSNRFRIALGSYIEEYNNKIRIIERIHSSTSSANGDGSLQRVMEFDHPYPATKIMWCPDREPVSPQRDLLATTGDYLRIWNVNSG-EAKLEALLNNNKNSEFCAPLTSFDWNKDDPSLLGTACIDTTCTIWDVNAQQAKTQIIAHDKEVYDIAFARGKDLFASVGADGSVRMFDLRSLVHSTIIYESPDLVPLLRLAWNRQDPNYLATIMADSTKTYLLDIRKPSSTVAELGEHQGAVNSLSWAPHSACHICTCGEDRQALIWDLSALPG-PIESPILAYTAQAEINSLEWFQQSPERNWVGIGFDNRLQVLRV 388
            D+ +  +KEIY Y   W ++++AW++R D+ ++FR+A+GSY+E+Y+N ++IIE+ H S    +G  SL +  EFDHPYP TKI+W     P    RDLLATTGDYLR+W+V  G   K E LLNNNK SE+CAPLTSFDWN+ D +++GT+ IDTTCTIWD+ AQ+AKTQ+IAHD+EV+DIAFARGKD+FASVGADGSVRMFDLRSL HSTIIYESP+L  LLRL WN+QDPNYLAT M DS +T +LDIR PS  VAELG H G VN+ +WAPHS+CHICT G+D QALIWDLS++   P+E PILAY A  EIN+L W    P+  WV I F ++LQ+LRV
Sbjct:    6 DEGSAPRKEIYTYTAPWTVYSLAWSRRQDIRSQFRLAIGSYVEQYSNGVQIIEKQHRSADDDDGLTSLYKTGEFDHPYPCTKILW----SPAVNGRDLLATTGDYLRVWSVQEGMNPKKECLLNNNKTSEYCAPLTSFDWNETDHNIVGTSSIDTTCTIWDIEAQKAKTQLIAHDREVFDIAFARGKDVFASVGADGSVRMFDLRSLEHSTIIYESPNLDALLRLEWNKQDPNYLATFMVDSRRTIILDIRVPSIPVAELGGHMGCVNAAAWAPHSSCHICTVGDDNQALIWDLSSMSKRPVEDPILAYNAAGEINNLHWSAARPD--WVSIAFHDKLQILRV 342          
BLAST of EWM28258.1 vs. NCBI_GenBank
Match: gi|857979117|emb|CEO95355.1| (hypothetical protein PBRA_004121 [Plasmodiophora brassicae])

HSP 1 Score: 446.432 bits (1147), Expect = 4.862e-154
Identity = 214/336 (63.69%), Postives = 257/336 (76.49%), Query Frame = 0
Query:   54 KKEIYNYETSWLIFAMAWNQRTDMSNRFRIALGSYIEEYNNKIRIIERIHSSTSSANGDGSLQRVMEFDHPYPATKIMWCPDREPVSPQRDLLATTGDYLRIWNV-NSGEAKLEALLNNNKNSEFCAPLTSFDWNKDDPSLLGTACIDTTCTIWDVNAQQAKTQIIAHDKEVYDIAFARGKDLFASVGADGSVRMFDLRSLVHSTIIYESPDLVPLLRLAWNRQDPNYLATIMADSTKTYLLDIRKPSSTVAELGEHQGAVNSLSWAPHSACHICTCGEDRQALIWDLSALPGPIESPILAYTAQAEINSLEWFQQSPERNWVGIGFDNRLQVLRV 388
            KKEIY Y+  W+++AM W+ R   S +FR+A+GS+IEEY NKI +I+            G  +    FDHPYP+TKI+W PD+  V    DLLATTGDYLR+W+V   G    + LLNNNKNSEFCAPLTSFDWN+ DP+L+GT+ IDTTCTIW+V  QQA+TQ+IAHDKEVYDIAFA  +D+FASVGADGSVRMFDLRSL HSTIIYESPDLVPLLRL WN+QD NYLATI+ D +K  +LDIR PS  VAEL  H   VNS++WAPHS+CHICT G+D QALIWDLS +P PI+ PILAYTA AE+N+L+W    P+  WVGI FD +LQ+LRV
Sbjct:    8 KKEIYTYDAPWVVYAMNWSVRA--SQKFRLAIGSFIEEYTNKIEVIQLNEEM-------GKFECTATFDHPYPSTKIIWAPDK--VGTGDDLLATTGDYLRLWSVAEDGSVSQKCLLNNNKNSEFCAPLTSFDWNETDPTLVGTSSIDTTCTIWNVETQQARTQLIAHDKEVYDIAFAPSQDVFASVGADGSVRMFDLRSLEHSTIIYESPDLVPLLRLGWNKQDHNYLATILMDQSKVVILDIRAPSLPVAELKGHSSCVNSIAWAPHSSCHICTAGDDSQALIWDLSQMPKPIDDPILAYTAAAEVNTLQWSSSQPD--WVGIAFDQKLQILRV 330          
BLAST of EWM28258.1 vs. NCBI_GenBank
Match: gi|1210527829|dbj|GAX13467.1| (WD repeat-containing protein 68 [Fistulifera solaris])

HSP 1 Score: 445.277 bits (1144), Expect = 1.884e-153
Identity = 211/343 (61.52%), Postives = 265/343 (77.26%), Query Frame = 0
Query:   48 DDANESKKEIYNYETSWLIFAMAWNQRTDMSNRFRIALGSYIEEYNNKIRIIERIHSSTSSANGDGSLQRVMEFDHPYPATKIMWCPDREPVSPQRDLLATTGDYLRIWNVNSG-EAKLEALLNNNKNSEFCAPLTSFDWNKDDPSLLGTACIDTTCTIWDVNAQQAKTQIIAHDKEVYDIAFARGKDLFASVGADGSVRMFDLRSLVHSTIIYESPDLVPLLRLAWNRQDPNYLATIMADSTKTYLLDIRKPSSTVAELGEHQGAVNSLSWAPHSACHICTCGEDRQALIWDLSALPG-PIESPILAYTAQAEINSLEWFQQSPERNWVGIGFDNRLQVLRV 388
            D+ +  +KEIY Y   W ++++AW++R D+ ++FR+A+GSY+E+Y+N ++IIE+ H +    +G  SL +  EFDHPYP TKI+W     P    RDLLATTGDYLR+W+V  G   K E LLNNNK SE+CAPLTSFDWN+ D +++GT+ IDTTCTIWD+ AQ+AKTQ+IAHD+EV+DIAFARGKD+FASVGADGSVRMFDLRSL HSTIIYESP+L  LLRL WN+QDPNYLAT M DS +T +LDIR PS  VAELG H G VN+ +WAPHS+CHICT G+D QALIWDLS++   P+E PILAY A  EIN+L W    P+  WV I F ++LQ+LRV
Sbjct:    6 DEGSAPRKEIYTYTAPWTVYSLAWSRRQDIRSQFRLAIGSYVEQYSNGVQIIEKQHRNADDDDGLTSLYKTGEFDHPYPCTKILW----NPAVNGRDLLATTGDYLRVWSVQEGMNPKKECLLNNNKTSEYCAPLTSFDWNETDHNIVGTSSIDTTCTIWDIEAQKAKTQLIAHDREVFDIAFARGKDVFASVGADGSVRMFDLRSLEHSTIIYESPNLDALLRLEWNKQDPNYLATFMVDSRRTIILDIRVPSIPVAELGGHMGCVNAAAWAPHSSCHICTVGDDNQALIWDLSSMSKRPVEDPILAYNAAGEINNLHWSAARPD--WVSIAFHDKLQILRV 342          
BLAST of EWM28258.1 vs. NCBI_GenBank
Match: gi|219123489|ref|XP_002182056.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217406657|gb|EEC46596.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 445.277 bits (1144), Expect = 2.032e-153
Identity = 211/346 (60.98%), Postives = 266/346 (76.88%), Query Frame = 0
Query:   54 KKEIYNYETSWLIFAMAWNQRTDMSNRFRIALGSYIEEYNNKIRIIERIHSSTSS---ANGDGSLQRVMEFDHPYPATKIMWCPDREPVSPQRDLLATTGDYLRIWNV---NSGEA----KLEALLNNNKNSEFCAPLTSFDWNKDDPSLLGTACIDTTCTIWDVNAQQAKTQIIAHDKEVYDIAFARGKDLFASVGADGSVRMFDLRSLVHSTIIYESPDLVPLLRLAWNRQDPNYLATIMADSTKTYLLDIRKPSSTVAELGEHQGAVNSLSWAPHSACHICTCGEDRQALIWDLSALPG-PIESPILAYTAQAEINSLEWFQQSPERNWVGIGFDNRLQVLRV 388
            +KEIY Y   W +F+MAW++R D +++FR+A+GSY+E+Y+N ++I++++     S     G  SL +   FDHPYP TKI+W PD+   +P  DLLATTGDYLR+WN+    SG+     K E LLNNNK SE+CAPLTSFDWN+ DP+++GT+ IDTTCTIWD+  Q A+TQ+IAHD+EV+D+AFARGKD+FASVGADGSVRMFDLRSL HSTIIYESP+L PLLRL WN+QDPNYLAT M DS +T +LDIR PS  VAELG H G VN+ +WAPHS+CHICT G+D QALIWDLSA+   P+E PILAY A  EIN+L+W    P+  WV I F ++LQ+LRV
Sbjct:    5 RKEIYTYAAPWTVFSMAWSRRQDKTSQFRLAIGSYVEQYSNAVQIVKKVPQHVDSDFAGGGSASLYQAGSFDHPYPCTKILWSPDQSLAAP--DLLATTGDYLRVWNIRDDGSGQGTVQCKKECLLNNNKTSEYCAPLTSFDWNEADPNIVGTSSIDTTCTIWDIETQTARTQLIAHDREVFDLAFARGKDVFASVGADGSVRMFDLRSLEHSTIIYESPNLDPLLRLEWNKQDPNYLATFMVDSRRTVILDIRVPSLPVAELGGHLGCVNATAWAPHSSCHICTAGDDSQALIWDLSAMSKRPVEEPILAYNASGEINNLQWSASQPD--WVSIAFHDKLQILRV 346          
BLAST of EWM28258.1 vs. NCBI_GenBank
Match: gi|676383281|ref|XP_009034919.1| (hypothetical protein AURANDRAFT_52888 [Aureococcus anophagefferens] >gi|323454218|gb|EGB10088.1| hypothetical protein AURANDRAFT_52888 [Aureococcus anophagefferens])

HSP 1 Score: 441.81 bits (1135), Expect = 2.325e-151
Identity = 209/368 (56.79%), Postives = 266/368 (72.28%), Query Frame = 0
Query:   54 KKEIYNYETSWLIFAMAWNQRTDMSNRFRIALGSYIEEYNNKIRIIER-----------------------IHSSTSSANGDGSLQRVMEFDHPYPATKIMWCPDREPVSPQRDLLATTGDYLRIWNV----------NSGEAKLEALLNNNKNSEFCAPLTSFDWNKDDPSLLGTACIDTTCTIWDVNAQQAKTQIIAHDKEVYDIAFARGKDLFASVGADGSVRMFDLRSLVHSTIIYESPDLVPLLRLAWNRQDPNYLATIMADSTKTYLLDIRKPSSTVAELGEHQGAVNSLSWAPHSACHICTCGEDRQALIWDLSALPGPIESPILAYTAQAEINSLEWFQQSPERNWVGIGFDNRLQVLRV 388
            KKEIY ++  W I+AMAW+QR +    FR+ALGS++EEY N++ I++R                        H+   +A+ + +   V EF+HPYPATKIMW PDR   + +RDLLATTGDYLR+W+V          ++   ++ ALLNNNKNSE+CAPLTSFDWN  +PSL+GT+ IDTTCTIWD++    KTQ+IAHDKEVYDIAFARGKD+FASVGADGSVR+FDLR+L HSTIIYE+  L PLLRLAWN+QDPNYLA I+AD  +T +LD+R PS  VAELG HQ  VNS++WAPHS+CH+CTC +D QALIWDL+A+P PI+ PILAYTA AE+N L+W   +    WV I ++  +Q+L V
Sbjct:   22 KKEIYTHDADWTIYAMAWSQRDEPERGFRLALGSFVEEYANRVSIVQRRDAYEKCVGTGVGRDRTAAALQRAHNPGKAADSEAAFVTVGEFEHPYPATKIMWSPDR---TSRRDLLATTGDYLRVWSVPDQREASDAESASSVEMVALLNNNKNSEYCAPLTSFDWNDTEPSLVGTSSIDTTCTIWDLSVPAVKTQLIAHDKEVYDIAFARGKDIFASVGADGSVRLFDLRTLEHSTIIYETSSLRPLLRLAWNKQDPNYLAAILADDPRTVILDVRVPSIPVAELGAHQACVNSIAWAPHSSCHLCTCSDDNQALIWDLTAMPKPIDDPILAYTADAEVNQLQW--STAHHEWVAIAYNTTMQMLHV 384          
BLAST of EWM28258.1 vs. NCBI_GenBank
Match: gi|551660884|ref|XP_005833209.1| (hypothetical protein GUITHDRAFT_86758 [Guillardia theta CCMP2712] >gi|428177349|gb|EKX46229.1| hypothetical protein GUITHDRAFT_86758 [Guillardia theta CCMP2712])

HSP 1 Score: 424.861 bits (1091), Expect = 1.692e-145
Identity = 212/344 (61.63%), Postives = 251/344 (72.97%), Query Frame = 0
Query:   54 KKEIYNYETSWLIFAMAWNQRTDMSNRFRIALGSYIEEYNNKIRIIERIHSSTSSANGDGSLQRVMEFDHPYPATKIMWCPDREPVSPQRDLLATTGDYLRIWNVNSGE------AKLEALLNNNKNSEFCAPLTSFDWNKDDPSLLGTACIDTTCTIWDVNAQQAKTQIIAHDKEVYDIAFARGKDLFASVGADGSVRMFDLRSLVHSTIIYES---PDLVPLLRLAWNRQDPNYLATIMADSTKTYLLDIRKPSSTVAELGEHQGAVNSLSWAPHSACHICTCGEDRQALIWDLSALPGPIESPILAYTAQAEINSLEWFQQSPERNWVGIGFDNRLQVLRV 388
            KKEI+ YE  W I+ M+W+ R D   RFRIA+GS+IEEY+NK++II+            G  Q    FDHPYP TKIMW PD+  V  Q+DLLATTGDYLR+W V SG         ++ LLNNNKNSEFCAPLTSFDWN  DPS++GT+ IDTTCTIW++   QAKTQ+IAHDKEVYDIAFA G ++FASVGADGSVR+FDLRSL HSTIIYES   PD  PLLRLAWN+QD NYLAT M D+T   +LDIR PS  VAEL  H+ +VN+++WAPHS CHIC+ G+D  ALIWDL ALP  IE PILAY A  EIN L+W    P+  WV IGF  ++Q+LRV
Sbjct:    7 KKEIFTYEAPWEIYGMSWSVRPD--KRFRIAVGSFIEEYSNKVQIIQL-------NENKGQFQETAIFDHPYPTTKIMWIPDK--VGTQKDLLATTGDYLRLWEVQSGASSSNSSVAMKKLLNNNKNSEFCAPLTSFDWNDTDPSIIGTSSIDTTCTIWNIETGQAKTQLIAHDKEVYDIAFACGTEVFASVGADGSVRLFDLRSLEHSTIIYESSTPPDAPPLLRLAWNKQDTNYLATFMMDNTSVVILDIRVPSLPVAELQGHEQSVNAIAWAPHSHCHICSAGDDAHALIWDLQALPRAIEDPILAYKAMGEINQLQWSASQPD--WVAIGFGQQMQILRV 337          
BLAST of EWM28258.1 vs. NCBI_GenBank
Match: gi|551545513|ref|XP_005760730.1| (hypothetical protein EMIHUDRAFT_459986 [Emiliania huxleyi CCMP1516] >gi|551550292|ref|XP_005762676.1| hypothetical protein EMIHUDRAFT_452725 [Emiliania huxleyi CCMP1516] >gi|485609290|gb|EOD08301.1| hypothetical protein EMIHUDRAFT_459986 [Emiliania huxleyi CCMP1516] >gi|485611782|gb|EOD10247.1| hypothetical protein EMIHUDRAFT_452725 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 421.779 bits (1083), Expect = 4.388e-144
Identity = 211/357 (59.10%), Postives = 261/357 (73.11%), Query Frame = 0
Query:   38 SLYPPQTSMGDDANESKKEIYNYETSWLIFAMAWNQRTDMSNRFRIALGSYIEEYNNKIRIIERIHSSTSSANGDGSLQRVMEFDHPYPATKIMWCPDREPVSPQRDLLATTGDYLRIWNV-NSGEAKLEALLNNNKNSEFCAPLTSFDWNKDDPSLLGTACIDTTCTIWDVNAQQAKTQIIAHDKEVYDIAFARGKDLFASVGADGSVRMFDLRSLVHSTIIYESPD-----LVPLLRLAWNRQDPNYLATIMADSTKTYLLDIRKPSSTVAELGEHQGAVNSLSWAPHSACHICTCGEDRQALIWDLSALPGPIESPILAYTAQAEINSLEWFQQSPERNWVGIGFDNRLQVLRV 388
            S+ P Q+S        +KEIY Y   WL++ M W+ R D   RFR+A+GS+ EEY+N +RII+ ++  T   N       V +F+HPYPATK+MW PD      +RDLLATTGDYLRIWNV ++   +L+ LLNNNKN+EFCAPLTSFDWN+ DP+++GT+ IDTTCTIWDV   QAKTQ+IAHDKEVYD+AFA G  +FASVGADGSVRMFDLRSL HSTIIYES D      +PL+RLAWN+QDPNYLATI  DS K  +LDIR PS   A L  H   VN++SWAPHS+CH+CT G+D QALIWDLS +P  IE PILAY A++E+N ++W +  P+  WV I FD +LQ+LRV
Sbjct:    5 SVAPAQSSA------KRKEIYTYTAPWLLYGMNWSVRAD--QRFRLAVGSFEEEYSNSVRIIQ-LNEETHEFN------EVAQFEHPYPATKMMWIPDAN--GARRDLLATTGDYLRIWNVVDNKSVRLDGLLNNNKNTEFCAPLTSFDWNETDPNIIGTSSIDTTCTIWDVTQMQAKTQLIAHDKEVYDLAFAAGVHVFASVGADGSVRMFDLRSLEHSTIIYESSDGQGGSPLPLIRLAWNKQDPNYLATITMDSNKVAILDIRVPSLPAATLEGHSQCVNAVSWAPHSSCHVCTSGDDNQALIWDLSPMPSRIEDPILAYYAESEVNQVQWSKTQPD--WVAICFDKKLQILRV 342          
BLAST of EWM28258.1 vs. NCBI_GenBank
Match: gi|470439196|ref|XP_004339158.1| (WD40 repeat protein [Acanthamoeba castellanii str. Neff] >gi|440796036|gb|ELR17145.1| WD40 repeat protein [Acanthamoeba castellanii str. Neff])

HSP 1 Score: 421.009 bits (1081), Expect = 4.773e-144
Identity = 207/342 (60.53%), Postives = 251/342 (73.39%), Query Frame = 0
Query:   48 DDANESKKEIYNYETSWLIFAMAWNQRTDMSNRFRIALGSYIEEYNNKIRIIERIHSSTSSANGDGSLQRVMEFDHPYPATKIMWCPDREPVSPQRDLLATTGDYLRIWNVN-SGEAKLEALLNNNKNSEFCAPLTSFDWNKDDPSLLGTACIDTTCTIWDVNAQQAKTQIIAHDKEVYDIAFARGKDLFASVGADGSVRMFDLRSLVHSTIIYESPDLVPLLRLAWNRQDPNYLATIMADSTKTYLLDIRKPSSTVAELGEHQGAVNSLSWAPHSACHICTCGEDRQALIWDLSALPGPIESPILAYTAQAEINSLEWFQQSPERNWVGIGFDNRLQVLRV 388
            DDA   KKEIY Y+  WLI+ M W+ R D   +FR+ALGS++E+Y NK+ I++    +       G   +  EF HPYPATKIMW PDR  V  + DLL TTGDY+R+W V  SG+  L+ LLNNNKNSEFCAPLTSFDWN  +P++LGT+ IDTTCTIWD+  Q A TQ+IAHDKEVYDIAFARG DLFASVGADGSVRMFDLR+L HSTIIYESP+   LLRL WNRQD  YL+TI  DS K  +LDIR PS   AEL  H   +NSL+WAPHS+CH+ T G+D  ALIWDLS++P PIE PILAY A+AE+N L+W    P+  W+ I F +++Q+LRV
Sbjct:    5 DDAR--KKEIYTYQAPWLIYGMNWSVRPD--KKFRLALGSFLEDYTNKVSIVQLNEDT-------GEFVQTGEFKHPYPATKIMWIPDR--VGDKPDLLGTTGDYMRLWQVGESGDVSLKCLLNNNKNSEFCAPLTSFDWNTTNPNILGTSSIDTTCTIWDIERQSAITQLIAHDKEVYDIAFARGTDLFASVGADGSVRMFDLRNLEHSTIIYESPEQSSLLRLCWNRQDDYYLSTISMDSNKVIILDIRVPSLPAAELTGHSSCINSLAWAPHSSCHLATAGDDSSALIWDLSSMPKPIEDPILAYNAEAEVNQLQWSLGQPD--WISIAFASKMQILRV 331          
The following BLAST results are available for this feature:
BLAST of EWM28258.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585110603|gb|EWM28258.1|0.000e+0100.00ddb1 and cul4-associated factor 7 [Nannochloropsis... [more]
gi|1072237569|gb|OEU22296.1|9.786e-15562.36hypothetical protein FRACYDRAFT_179515 [Fragilario... [more]
gi|1210511388|dbj|GAX29526.1|4.078e-15461.81WD repeat-containing protein 68 [Fistulifera solar... [more]
gi|857979117|emb|CEO95355.1|4.862e-15463.69hypothetical protein PBRA_004121 [Plasmodiophora b... [more]
gi|1210527829|dbj|GAX13467.1|1.884e-15361.52WD repeat-containing protein 68 [Fistulifera solar... [more]
gi|219123489|ref|XP_002182056.1|2.032e-15360.98predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|676383281|ref|XP_009034919.1|2.325e-15156.79hypothetical protein AURANDRAFT_52888 [Aureococcus... [more]
gi|551660884|ref|XP_005833209.1|1.692e-14561.63hypothetical protein GUITHDRAFT_86758 [Guillardia ... [more]
gi|551545513|ref|XP_005760730.1|4.388e-14459.10hypothetical protein EMIHUDRAFT_459986 [Emiliania ... [more]
gi|470439196|ref|XP_004339158.1|4.773e-14460.53WD40 repeat protein [Acanthamoeba castellanii str.... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2475rna2475Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications