EWM28183.1, cds2442 (CDS) Nannochloropsis gaditana

BLAST of EWM28183.1 vs. NCBI_GenBank
Match: gi|585110528|gb|EWM28183.1| (light harvesting complex protein [Nannochloropsis gaditana])

HSP 1 Score: 428.328 bits (1100), Expect = 9.293e-152
Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 0

Query:    1 MMRAVVLLGLLSSAAAFIPATFNTGKSSYARKNLVVASVSDLIGADTETGGIWDPLGLSQNEGSLRKYRECELKHGRVAMAAMLGIFVQGLYHLPDPVFSNPRPLAALQQVYEQRPEAIWQIIVGLGVIEFTGGRQKEDRAPGDLNFGSSFIPKSEKEFEELQLKELKNGRLAMVASMGALLQEYLTGQGPVEQVLAGHLNPFGDGQGFF 210
            MMRAVVLLGLLSSAAAFIPATFNTGKSSYARKNLVVASVSDLIGADTETGGIWDPLGLSQNEGSLRKYRECELKHGRVAMAAMLGIFVQGLYHLPDPVFSNPRPLAALQQVYEQRPEAIWQIIVGLGVIEFTGGRQKEDRAPGDLNFGSSFIPKSEKEFEELQLKELKNGRLAMVASMGALLQEYLTGQGPVEQVLAGHLNPFGDGQGFF
Sbjct:    1 MMRAVVLLGLLSSAAAFIPATFNTGKSSYARKNLVVASVSDLIGADTETGGIWDPLGLSQNEGSLRKYRECELKHGRVAMAAMLGIFVQGLYHLPDPVFSNPRPLAALQQVYEQRPEAIWQIIVGLGVIEFTGGRQKEDRAPGDLNFGSSFIPKSEKEFEELQLKELKNGRLAMVASMGALLQEYLTGQGPVEQVLAGHLNPFGDGQGFF 210          

BLAST of EWM28183.1 vs. NCBI_GenBank
Match: gi|553181527|ref|XP_005853581.1| (light harvesting complex protein [Nannochloropsis gaditana CCMP526] >gi|422295478|gb|EKU22777.1| light harvesting complex protein [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 398.667 bits (1023), Expect = 3.203e-140
Identity = 196/196 (100.00%), Postives = 196/196 (100.00%), Query Frame = 0

Query:    1 MMRAVVLLGLLSSAAAFIPATFNTGKSSYARKNLVVASVSDLIGADTETGGIWDPLGLSQNEGSLRKYRECELKHGRVAMAAMLGIFVQGLYHLPDPVFSNPRPLAALQQVYEQRPEAIWQIIVGLGVIEFTGGRQKEDRAPGDLNFGSSFIPKSEKEFEELQLKELKNGRLAMVASMGALLQEYLTGQGPVEQVL 196
            MMRAVVLLGLLSSAAAFIPATFNTGKSSYARKNLVVASVSDLIGADTETGGIWDPLGLSQNEGSLRKYRECELKHGRVAMAAMLGIFVQGLYHLPDPVFSNPRPLAALQQVYEQRPEAIWQIIVGLGVIEFTGGRQKEDRAPGDLNFGSSFIPKSEKEFEELQLKELKNGRLAMVASMGALLQEYLTGQGPVEQVL
Sbjct:    1 MMRAVVLLGLLSSAAAFIPATFNTGKSSYARKNLVVASVSDLIGADTETGGIWDPLGLSQNEGSLRKYRECELKHGRVAMAAMLGIFVQGLYHLPDPVFSNPRPLAALQQVYEQRPEAIWQIIVGLGVIEFTGGRQKEDRAPGDLNFGSSFIPKSEKEFEELQLKELKNGRLAMVASMGALLQEYLTGQGPVEQVL 196          

BLAST of EWM28183.1 vs. NCBI_GenBank
Match: gi|585113162|gb|EWM30498.1| (light-harvesting protein [Nannochloropsis gaditana])

HSP 1 Score: 237.269 bits (604), Expect = 2.655e-76
Identity = 118/211 (55.92%), Postives = 147/211 (69.67%), Query Frame = 0

Query:    1 MMRAVVLLGLLSSAAAFIPATFNTGKSSYARKNLVVASVSDLIGADTETGGIWDPLGLSQNEGSLRKYRECELKHGRVAMAAMLGIFVQGLYHLPDPVFSNPRPLAALQQVYEQRPEAIWQIIVGLGVIEFTGGRQKE-DRAPGDLNFGSSFIPKSEKEFEELQLKELKNGRLAMVASMGALLQEYLTGQGPVEQVLAGHLNPFGDGQGFF 210
            M  A   L LL  + AF+P           R   V  +V+++IG+D ET G++DPLGL+++E SL + R  ELKHGRVAM A LG  VQ  YHLPD VFSNPRPLAAL QVY +RP A WQI + +G IE T G+Q   +RAPGD+ FG++FIP   ++F  LQLKELKNGRLAM+A +G  +QE LTGQGP+EQ+L GH +PFGDGQG F
Sbjct:    1 MKTAFAFLALLGVSTAFMPTA-----PRMTRGRSVRMAVNEMIGSDVETNGVFDPLGLAKDEASLYRSRLIELKHGRVAMLACLGTLVQSFYHLPDEVFSNPRPLAALAQVYSERPVAFWQIFLAIGAIELTIGKQDTANRAPGDVGFGAAFIPDDAEDFAALQLKELKNGRLAMMAIIGQFVQEKLTGQGPIEQLLEGHFSPFGDGQGAF 206          

BLAST of EWM28183.1 vs. NCBI_GenBank
Match: gi|873230095|emb|CEM11606.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 231.106 bits (588), Expect = 8.802e-74
Identity = 116/205 (56.59%), Postives = 144/205 (70.24%), Query Frame = 0

Query:   10 LLSSAAAFIPATFNTG---KSSYARKNLVVASVSDLIGADTETGGIWDPLGLSQNEGSLRKYRECELKHGRVAMAAMLGIFVQGLYHLPDPVFSNPRPLAALQQVYEQRPEAIWQIIVGLGVIEFTGGRQKEDRAPGDL-NFGSSFIPKSEKEFEELQLKELKNGRLAMVASMGALLQEYLTGQGPVEQVLAGHLNPFGDGQGFF 210
            L+  A AF+P T   G       AR    + +V  L GAD ETGG+WDPLGLSQNE +L  YR  ELKHGRV M A+LG+ VQ  + LPDPVF+NPRPL A+ QV++QRPEAI QI++ +G  E    RQ  +  PG L NFG++F P+ E +FEELQ KELKNGRLAM+   G L+QE LTGQGP+EQ+  GH++PFGDGQG+F
Sbjct:   11 LVVGAHAFVPPTGFQGALRSRGAARPATTMGAVDQLAGADVETGGVWDPLGLSQNEDALSLYRAAELKHGRVCMMAVLGVIVQTYFQLPDPVFNNPRPLEAIVQVWQQRPEAIIQILLAIGATELYFLRQSPEDPPGSLQNFGAAFRPRDEAKFEELQRKELKNGRLAMIGISGMLVQEALTGQGPLEQIQVGHISPFGDGQGYF 215          

BLAST of EWM28183.1 vs. NCBI_GenBank
Match: gi|585112441|gb|EWM29860.1| (light-harvesting protein [Nannochloropsis gaditana])

HSP 1 Score: 217.238 bits (552), Expect = 7.328e-69
Identity = 106/174 (60.92%), Postives = 130/174 (74.71%), Query Frame = 0

Query:   38 SVSDLIGADTETGGIWDPLGLSQNEGSLRKYRECELKHGRVAMAAMLGIFVQGLYHLPDPVFSNPRPLAALQQVYEQRPEAIWQIIVGLGVIEFTGGRQKEDRAPGDL-NFGSSFIPKSEKEFEELQLKELKNGRLAMVASMGALLQEYLTGQGPVEQVLAGHLNPFGDGQGFF 210
            S SD+IG D ETGG++DPLG S++E SL KYR+ ELKHGRVAM A LG  VQ   HLPD VFSNPRPL AL Q+  +RP AI QI++ + +IE T G+Q  + APG L  FG +F P+ E E   +QLKELKNGRLAMVA +G  +QE LTGQGP+EQ+ +GH++PFGDGQG F
Sbjct:    2 SASDMIGIDVETGGLFDPLGFSKDEQSLYKYRQVELKHGRVAMLACLGTLVQSYTHLPDDVFSNPRPLGALGQLLSERPLAILQIVIAITLIEVTSGKQDPELAPGQLGRFGEAFKPEGEAEMAAVQLKELKNGRLAMVAIIGQWVQELLTGQGPIEQITSGHISPFGDGQGLF 175          

BLAST of EWM28183.1 vs. NCBI_GenBank
Match: gi|585107630|gb|EWM25765.1| (light harvesting complex protein [Nannochloropsis gaditana])

HSP 1 Score: 189.504 bits (480), Expect = 1.606e-57
Identity = 105/213 (49.30%), Postives = 146/213 (68.54%), Query Frame = 0

Query:    1 MMRAVVLLGLLSSAAAFIPATFNTGKSSYARKNLVVASVSDLIGADTETGGIWDPLGLSQNEGSLRKYRECELKHGRVAMAAMLGIFVQGLYHLPDPVFSNPRPLAALQQVYEQRPEAIWQIIVGLGVIEFTGGRQK-EDRAPGDLNFGSSFIP-KSEKE-FEELQLKELKNGRLAMVASMGALLQEYLTGQGPVEQVLAGHLNPFGDGQGFF 210
            M  A+VL+G L+ A+AF+PA     ++    + +   +V+D++G+D ETGG+WDPL  S++EGSL +YR  ELKHGR+AM A+LG++V   YH   P++   +    ++ + E    A  QI+  +GVIE T G+Q  E++APGDL FG +F P K++ E F ELQLKELKNGRLAM+ + G LLQE +TGQ   EQ+ A HL+PFGDGQGFF
Sbjct:    1 MKSAMVLVGSLAVASAFVPAAPKMSRT----RGMTRMAVNDILGSDVETGGVWDPLNFSKDEGSLYRYRAVELKHGRLAMLAVLGLWVSEFYH---PLYDG-KISPGIKAIGELPGPAWLQILATIGVIELTVGKQDTENKAPGDLGFGYNFNPFKNDPEKFAELQLKELKNGRLAMLGAAGILLQESITGQTCFEQIAAQHLSPFGDGQGFF 205          

BLAST of EWM28183.1 vs. NCBI_GenBank
Match: gi|290766160|gb|ADD60136.1| (light harvesting complex protein 3, partial [Vaucheria litorea] >gi|290766162|gb|ADD60137.1| light harvesting complex protein 3, partial [Elysia chlorotica])

HSP 1 Score: 174.481 bits (441), Expect = 1.824e-52
Identity = 87/144 (60.42%), Postives = 109/144 (75.69%), Query Frame = 0

Query:   53 WDPLGLSQNEGSLRKYRECELKHGRVAMAAMLGIFVQGLYHLPDPVFSNPRPLAALQQVYEQRPEAIWQIIVGLGVIEFTGGRQK-EDRAPGDL-NFGSSFIPKSEKEFEELQLKELKNGRLAMVASMGALLQEYLTGQGPVEQ 194
            WDPLG S++E SL + R  ELKHGR+ M A LG+FVQ   HLPDPVFSNPRP+ AL QV+ +RP AIWQII+ +G IE + G+Q  E++APGDL +FG    P    E+E++QL+ELKNGRLAM+A MG L+QE LT QGP+EQ
Sbjct:    1 WDPLGFSKDEASLFRRRVVELKHGRICMLATLGVFVQNSIHLPDPVFSNPRPIGALLQVFAERPIAIWQIILAIGAIELSIGKQDYENKAPGDLGSFGDFAKPSDPIEWEKVQLRELKNGRLAMMAIMGMLVQEGLTKQGPLEQ 144          

BLAST of EWM28183.1 vs. NCBI_GenBank
Match: gi|873233856|emb|CEM02552.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 171.014 bits (432), Expect = 3.529e-50
Identity = 102/216 (47.22%), Postives = 139/216 (64.35%), Query Frame = 0

Query:    1 MMRAVVLLGLLSSAAAFIPATFNTGKSSYARKNLVV--ASVSDLIGADTETGGIWDPLGLSQNEGSLRKYRECELKHGRVAMAAMLGIFVQGLYHLPDPVFSNP-RP-LAALQQVYEQRPEAIW-QIIVGLGVIEFTGGRQK-EDRAPGDLNFGSSFIPKSEKEFEELQLKELKNGRLAMVASMGALLQEYLTGQGPVEQVLAGHLNPFGDGQGFF 210
            MM+ +V   L+++A+AF+P+    G      ++      +V D+IGAD ET G+WDPLG S++E SL +YR  ELKHGRVAM A+LG FV  L+H   P++     P L A+ QV    P A W QI+  +  IE + G+Q  E+RAPGDL FG +       EF +LQLKE+KNGRLAM+A  G L+QE +TGQ  ++Q+  GH++PFGDGQG F
Sbjct:    1 MMKLMVFAALIAAASAFVPSAPLRGLDKLQSRDRTAPRMAVEDMIGADVETRGVWDPLGFSKDESSLYRYRAVELKHGRVAMLAVLGYFVAELWH---PLYDGKVEPGLKAISQV----PSAGWLQILATIAAIELSIGKQDFENRAPGDLGFGINPFENDPVEFAKLQLKEIKNGRLAMIAIAGMLVQELVTGQTTLQQLREGHISPFGDGQGLF 209          

BLAST of EWM28183.1 vs. NCBI_GenBank
Match: gi|873224040|emb|CEM27246.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 168.318 bits (425), Expect = 4.577e-49
Identity = 106/213 (49.77%), Postives = 136/213 (63.85%), Query Frame = 0

Query:    2 MRAVVLLGLLSSA------AAFIP-ATFNTGKSSYA-RKNLVVASVSDLIGADTETGGIWDPLGLSQNEGSLRKYRECELKHGRVAMAAMLGIFVQGL-YHLPDPVFSNPRPLAALQQVYEQRPEAIWQIIVGLGVIEFTGGRQK-EDRAPGDLN-FGSSFIPKSEKEFEELQLKELKNGRLAMVASMGALLQEYLTGQGPVEQVLAGHLNPF 203
            M+ V +  LL  A      AAF+P A   +  +  A R      SV ++IGAD ETGG++DPL  S++E SL + R  ELKHGR+AM A LG FVQ    HLPDPVFS PRPL+AL +V  +RP A  QI+  +  IE   GRQ  E++APGDL  FG SF     +EF + QL+ELKNGRLAM+  MG ++QE LTGQ   EQ+ +G++NPF
Sbjct:    1 MKCVAVASLLLIAVAYGEEAAFVPSAPLRSLPTRRALRSTTPKMSVEEMIGADVETGGVFDPLKFSEDEASLFRRRAVELKHGRIAMLACLGYFVQSAGVHLPDPVFSEPRPLSALTKVLTERPWAAAQIVAAIAAIELGPGRQDYENKAPGDLGYFGDSFKNSDPEEFRKDQLRELKNGRLAMIGIMGMMVQEGLTGQSVWEQIGSGNINPF 213          

BLAST of EWM28183.1 vs. NCBI_GenBank
Match: gi|585102300|gb|EWM21948.1| (fucoxanthin chlorophyll a c binding protein [Nannochloropsis gaditana])

HSP 1 Score: 160.999 bits (406), Expect = 4.433e-46
Identity = 92/179 (51.40%), Postives = 119/179 (66.48%), Query Frame = 0

Query:   35 VVASVSDLIGADTETGGIWDPLGLSQN--EGSLRKYRECELKHGRVAMAAMLGIFVQGLYHLPDPVFSNPRPLAALQQVYEQRPEAIWQIIVGLGVIEFTGGRQKEDRAPGDLNFGS-SFIPKSEKEFEELQLKELKNGRLAMVASMGALLQEYLTGQGPVEQVLAGHLNPFGDGQGFF 210
            V   +S ++G+D E    +DPLGL++N  E +L  YR  ELKHGRV M A +G  VQGLYHLPD  F   +P+ AL +V  +RP A  QI + +  +E  G   ++  APGDL F      P+  +E  ELQLKELKNGRLAM+A+ G   QEY+TGQGPVEQ+L+GH++PFGDGQG F
Sbjct:   49 VSMDISGIVGSDVEVPE-FDPLGLAKNKDEETLGWYRAAELKHGRVCMLASVGYLVQGLYHLPDGPFEASKPIDALLKVSSERPLAAVQIAIAIAALEVLGASIQKYTAPGDLTFDPLGLKPEDPEELAELQLKELKNGRLAMLATAGLAAQEYVTGQGPVEQLLSGHISPFGDGQGAF 226