EWM28212.1, cds2432 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM28212.1 vs. NCBI_GenBank
Match: gi|585110557|gb|EWM28212.1| (hypothetical protein Naga_100004g75 [Nannochloropsis gaditana]) HSP 1 Score: 744.962 bits (1922), Expect = 0.000e+0 Identity = 361/361 (100.00%), Postives = 361/361 (100.00%), Query Frame = 0
Query: 1 MPYVRSNWEGLTKFNGGHKFEVGHVHSFNEVKLARPLQAGPKGCFLHVTMEKDARVSYMEMVTSAREVEMYVLKGGHGASGEYSKVGGQRGRPAVDHPYKYHYKFTSSDLPDVPVALVQLRLTPHEEDAREVYLFRLSVLVGEANSRHRSNISRGIGGLQDALTVSGNGKYLSGHSSTNTSMVPMSTGRRNSSSQGPQQGQYGSSGVVATRNNENQVVPAGSGAEGAVVADALNDVMGKMLTVVSRKTKGYVGSTYKKTEDKISARMKSIEAKISGFEEVVGQNLERRLLDLEHVMATLNERISPKLSPLAPEGKKQGQSLAAPGKRDSDRSDSVNCEGGVEESKDGHAPQMSRNQQPCEP 361
MPYVRSNWEGLTKFNGGHKFEVGHVHSFNEVKLARPLQAGPKGCFLHVTMEKDARVSYMEMVTSAREVEMYVLKGGHGASGEYSKVGGQRGRPAVDHPYKYHYKFTSSDLPDVPVALVQLRLTPHEEDAREVYLFRLSVLVGEANSRHRSNISRGIGGLQDALTVSGNGKYLSGHSSTNTSMVPMSTGRRNSSSQGPQQGQYGSSGVVATRNNENQVVPAGSGAEGAVVADALNDVMGKMLTVVSRKTKGYVGSTYKKTEDKISARMKSIEAKISGFEEVVGQNLERRLLDLEHVMATLNERISPKLSPLAPEGKKQGQSLAAPGKRDSDRSDSVNCEGGVEESKDGHAPQMSRNQQPCEP
Sbjct: 1 MPYVRSNWEGLTKFNGGHKFEVGHVHSFNEVKLARPLQAGPKGCFLHVTMEKDARVSYMEMVTSAREVEMYVLKGGHGASGEYSKVGGQRGRPAVDHPYKYHYKFTSSDLPDVPVALVQLRLTPHEEDAREVYLFRLSVLVGEANSRHRSNISRGIGGLQDALTVSGNGKYLSGHSSTNTSMVPMSTGRRNSSSQGPQQGQYGSSGVVATRNNENQVVPAGSGAEGAVVADALNDVMGKMLTVVSRKTKGYVGSTYKKTEDKISARMKSIEAKISGFEEVVGQNLERRLLDLEHVMATLNERISPKLSPLAPEGKKQGQSLAAPGKRDSDRSDSVNCEGGVEESKDGHAPQMSRNQQPCEP 361
BLAST of EWM28212.1 vs. NCBI_GenBank
Match: gi|585109848|gb|EWM27581.1| (hypothetical protein Naga_100015g23 [Nannochloropsis gaditana]) HSP 1 Score: 73.1738 bits (178), Expect = 7.776e-11 Identity = 80/349 (22.92%), Postives = 158/349 (45.27%), Query Frame = 0
Query: 1 MPYVRSNWEGLTKFNGGHKFEVGHVHSFNEVKLARPLQAGP--KGCFLHVTMEKDARVSYMEMVTSAREVEMYVLKGGHGASGEYSKVGGQRGRPAVDHPYKYHYKFTSSDLPDVPVALVQLRLTPHEEDAREVYLFRLSVLVGEANSRHRSNISRGIGGLQDALTVSGNGKYLSGHSSTNTSMVPMSTGRRNSSSQGPQQGQYGSSGVVATRNNENQVVPAGSGAEGAVVADALNDVMGKMLTVVSRKTKGYVGSTYKKTEDKISARMKSIEAKISGFEEVVGQNLERRLLDLEHVMATLNERISPKLSPLAPEGKKQGQSLAAPGKRDSDRSDSVNCEGGVEESKDG 347
MPY++SNW + +F G + + E+ L Q P + C+LHV +E ARV ++++ +A + + +++G Y+ + +G+ + ++P + ++ +S L V V +Q++ + + + ++SV+V E ++ R ++ A T +G L TN ST +N + Q Q+ Y N E+ V+ G VV D ++L V++++ + + ST + E ++ A +K +E K+ EEV + + A + R++ S L E + Q LAA D ++ + + +GG E+ ++G
Sbjct: 1 MPYLKSNWSSMPPLEEFGRFAFGEIFTIPEMTLT---QTDPTARACYLHVALEHQARVQELDLICAAPTIVVNLMRGKSTTGMSYTYLTTLKGQTSEEYPGLFAFRIDASLLSHVEVWQLQIKFLFPRVGEKSLLIKKVSVIV-EDQAKKRGELN------MKAETGAGKRGVL---DRTN------STAIQNYNPQ-QQRQYYPPPVPPQPFNAESAVMV------GLVVVD-------QVLGVMTKEIQDNLESTCRGVEKRLLADLKRLEGKMRRIEEV-----------YDDIAADI--RLTSLQSAL--EEARMAQGLAA---NDPEKKSATDADGGNEDQEEG 298 The following BLAST results are available for this feature:
BLAST of EWM28212.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 2
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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