EWM28212.1, cds2432 (CDS) Nannochloropsis gaditana

Overview
NameEWM28212.1
Unique Namecds2432
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:392790..392931 -
Alignment locationCM002459.1:391508..392451 -

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Properties
Property NameValue
Protein idEWM28212.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100004g75.9143.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:392790..392931 -
CM002459.1supercontigCM002459.1:391508..392451 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
BLAST of EWM28212.1 vs. NCBI_GenBank
Match: gi|585110557|gb|EWM28212.1| (hypothetical protein Naga_100004g75 [Nannochloropsis gaditana])

HSP 1 Score: 744.962 bits (1922), Expect = 0.000e+0
Identity = 361/361 (100.00%), Postives = 361/361 (100.00%), Query Frame = 0
Query:    1 MPYVRSNWEGLTKFNGGHKFEVGHVHSFNEVKLARPLQAGPKGCFLHVTMEKDARVSYMEMVTSAREVEMYVLKGGHGASGEYSKVGGQRGRPAVDHPYKYHYKFTSSDLPDVPVALVQLRLTPHEEDAREVYLFRLSVLVGEANSRHRSNISRGIGGLQDALTVSGNGKYLSGHSSTNTSMVPMSTGRRNSSSQGPQQGQYGSSGVVATRNNENQVVPAGSGAEGAVVADALNDVMGKMLTVVSRKTKGYVGSTYKKTEDKISARMKSIEAKISGFEEVVGQNLERRLLDLEHVMATLNERISPKLSPLAPEGKKQGQSLAAPGKRDSDRSDSVNCEGGVEESKDGHAPQMSRNQQPCEP 361
            MPYVRSNWEGLTKFNGGHKFEVGHVHSFNEVKLARPLQAGPKGCFLHVTMEKDARVSYMEMVTSAREVEMYVLKGGHGASGEYSKVGGQRGRPAVDHPYKYHYKFTSSDLPDVPVALVQLRLTPHEEDAREVYLFRLSVLVGEANSRHRSNISRGIGGLQDALTVSGNGKYLSGHSSTNTSMVPMSTGRRNSSSQGPQQGQYGSSGVVATRNNENQVVPAGSGAEGAVVADALNDVMGKMLTVVSRKTKGYVGSTYKKTEDKISARMKSIEAKISGFEEVVGQNLERRLLDLEHVMATLNERISPKLSPLAPEGKKQGQSLAAPGKRDSDRSDSVNCEGGVEESKDGHAPQMSRNQQPCEP
Sbjct:    1 MPYVRSNWEGLTKFNGGHKFEVGHVHSFNEVKLARPLQAGPKGCFLHVTMEKDARVSYMEMVTSAREVEMYVLKGGHGASGEYSKVGGQRGRPAVDHPYKYHYKFTSSDLPDVPVALVQLRLTPHEEDAREVYLFRLSVLVGEANSRHRSNISRGIGGLQDALTVSGNGKYLSGHSSTNTSMVPMSTGRRNSSSQGPQQGQYGSSGVVATRNNENQVVPAGSGAEGAVVADALNDVMGKMLTVVSRKTKGYVGSTYKKTEDKISARMKSIEAKISGFEEVVGQNLERRLLDLEHVMATLNERISPKLSPLAPEGKKQGQSLAAPGKRDSDRSDSVNCEGGVEESKDGHAPQMSRNQQPCEP 361          
BLAST of EWM28212.1 vs. NCBI_GenBank
Match: gi|585109848|gb|EWM27581.1| (hypothetical protein Naga_100015g23 [Nannochloropsis gaditana])

HSP 1 Score: 73.1738 bits (178), Expect = 7.776e-11
Identity = 80/349 (22.92%), Postives = 158/349 (45.27%), Query Frame = 0
Query:    1 MPYVRSNWEGLTKFNGGHKFEVGHVHSFNEVKLARPLQAGP--KGCFLHVTMEKDARVSYMEMVTSAREVEMYVLKGGHGASGEYSKVGGQRGRPAVDHPYKYHYKFTSSDLPDVPVALVQLRLTPHEEDAREVYLFRLSVLVGEANSRHRSNISRGIGGLQDALTVSGNGKYLSGHSSTNTSMVPMSTGRRNSSSQGPQQGQYGSSGVVATRNNENQVVPAGSGAEGAVVADALNDVMGKMLTVVSRKTKGYVGSTYKKTEDKISARMKSIEAKISGFEEVVGQNLERRLLDLEHVMATLNERISPKLSPLAPEGKKQGQSLAAPGKRDSDRSDSVNCEGGVEESKDG 347
            MPY++SNW  +       +F  G + +  E+ L    Q  P  + C+LHV +E  ARV  ++++ +A  + + +++G       Y+ +   +G+ + ++P  + ++  +S L  V V  +Q++        + + + ++SV+V E  ++ R  ++        A T +G    L     TN      ST  +N + Q  Q+  Y         N E+ V+       G VV D       ++L V++++ +  + ST +  E ++ A +K +E K+   EEV            + + A +  R++   S L  E  +  Q LAA    D ++  + + +GG E+ ++G
Sbjct:    1 MPYLKSNWSSMPPLEEFGRFAFGEIFTIPEMTLT---QTDPTARACYLHVALEHQARVQELDLICAAPTIVVNLMRGKSTTGMSYTYLTTLKGQTSEEYPGLFAFRIDASLLSHVEVWQLQIKFLFPRVGEKSLLIKKVSVIV-EDQAKKRGELN------MKAETGAGKRGVL---DRTN------STAIQNYNPQ-QQRQYYPPPVPPQPFNAESAVMV------GLVVVD-------QVLGVMTKEIQDNLESTCRGVEKRLLADLKRLEGKMRRIEEV-----------YDDIAADI--RLTSLQSAL--EEARMAQGLAA---NDPEKKSATDADGGNEDQEEG 298          
The following BLAST results are available for this feature:
BLAST of EWM28212.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585110557|gb|EWM28212.1|0.000e+0100.00hypothetical protein Naga_100004g75 [Nannochlorops... [more]
gi|585109848|gb|EWM27581.1|7.776e-1122.92hypothetical protein Naga_100015g23 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2440rna2440Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications