EWM28266.1, cds2430 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28266.1 vs. NCBI_GenBank
Match: gi|585110611|gb|EWM28266.1| (nitroreductase-like protein [Nannochloropsis gaditana]) HSP 1 Score: 662.529 bits (1708), Expect = 0.000e+0 Identity = 322/322 (100.00%), Postives = 322/322 (100.00%), Query Frame = 0 Query: 1 MTFLPFHHLVTRRLGMYRSGGKGAWLFLPTSSSARSRPGRLRPFHAAFSTSAGAQHSEEENEDHESSLARAGISAFKRAVLARHSTKAFDAKREIADETLAAILALTLRCPTSFNVQPYTVTIVQSEDTKQKLAACMLGPNSARVLQAPVTAVFAADLDPVQLVPRVQSLERRKRGLPEAYLATLPFSVAFLAGKGHLAHAFKDLFTTAMSPLQPMPSVSTLEAWSYKNTAIAASWYMLACSVHGLDTCPMEGFDGRRIMHELHIPASRYAIPLVVSTGFAMPLPSSSPERNKEAKRSPRFPPEAVVFKDQYGHAYKGISQL 322 MTFLPFHHLVTRRLGMYRSGGKGAWLFLPTSSSARSRPGRLRPFHAAFSTSAGAQHSEEENEDHESSLARAGISAFKRAVLARHSTKAFDAKREIADETLAAILALTLRCPTSFNVQPYTVTIVQSEDTKQKLAACMLGPNSARVLQAPVTAVFAADLDPVQLVPRVQSLERRKRGLPEAYLATLPFSVAFLAGKGHLAHAFKDLFTTAMSPLQPMPSVSTLEAWSYKNTAIAASWYMLACSVHGLDTCPMEGFDGRRIMHELHIPASRYAIPLVVSTGFAMPLPSSSPERNKEAKRSPRFPPEAVVFKDQYGHAYKGISQL Sbjct: 1 MTFLPFHHLVTRRLGMYRSGGKGAWLFLPTSSSARSRPGRLRPFHAAFSTSAGAQHSEEENEDHESSLARAGISAFKRAVLARHSTKAFDAKREIADETLAAILALTLRCPTSFNVQPYTVTIVQSEDTKQKLAACMLGPNSARVLQAPVTAVFAADLDPVQLVPRVQSLERRKRGLPEAYLATLPFSVAFLAGKGHLAHAFKDLFTTAMSPLQPMPSVSTLEAWSYKNTAIAASWYMLACSVHGLDTCPMEGFDGRRIMHELHIPASRYAIPLVVSTGFAMPLPSSSPERNKEAKRSPRFPPEAVVFKDQYGHAYKGISQL 322
BLAST of EWM28266.1 vs. NCBI_GenBank
Match: gi|299116515|emb|CBN76229.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 213.001 bits (541), Expect = 1.588e-63 Identity = 115/290 (39.66%), Postives = 169/290 (58.28%), Query Frame = 0 Query: 33 SARSRPGRLRPFHAAFSTSAGAQHSEEENED---HESSLARAGISAFKRAVLARHSTKAFDAKREIADETLAAILALTLRCPTSFNVQPYTVTIVQSEDTKQKLAACMLGPNSARVLQAPVTAVFAADLDPVQLVPRVQSLERRKRGLPEAYLATLPFSVAFLAGKGHLAHAFKDLFTTAMSPLQPMPSVSTLEAWSYKNTAIAASWYMLACSVHGLDTCPMEGFDGRRIMHELHIPASRYAIPLVVSTGFAMPLPSSSPERNKEAKRSPRFPPEAVVFKDQYGHAYKGI 319 S RS RLR G + +E+ D + SSL+ G+ AF+ V +R + +F + E+ L I+ALT P+SFN+QP++V +V+ +++L+ MLG N+ +VL APVTAVF ADL+P + + R+ L R K G+PEA + +V +G+G + +A ++ TT SP+QP P V++ EAWS+KNTA+A Y+L+C+ HGLDT PMEGFD RR+ L IP RY IP++V TG+ P R R+PP+ VVF +G G+ Sbjct: 34 SVRSSSPRLR---------QGEDANLQEDADLSGNSSSLSPEGLKAFRDVVTSRTAAISF-SDEEVDPPALREIMALTQSAPSSFNIQPWSVVVVRDTAARERLSTAMLGGNAKKVLAAPVTAVFCADLEPSKRINRMVELNR-KAGMPEAEITKFCLAVNLFSGEGVVGNAVRNAVTTIASPMQPAPEVASAEAWSFKNTALAVQTYILSCTAHGLDTAPMEGFDARRVRAALDIP-DRYGIPIIVPTGYPAPSKPEGQGGGGGVARRWRYPPQEVVFDGTFGVGMTGV 311
BLAST of EWM28266.1 vs. NCBI_GenBank
Match: gi|695432281|ref|XP_009530894.1| (hypothetical protein PHYSODRAFT_260100 [Phytophthora sojae] >gi|348673646|gb|EGZ13465.1| hypothetical protein PHYSODRAFT_260100 [Phytophthora sojae]) HSP 1 Score: 186.808 bits (473), Expect = 6.511e-54 Identity = 103/243 (42.39%), Postives = 146/243 (60.08%), Query Frame = 0 Query: 79 AVLARHSTKAF--DAKREIADETLAAILALTLRCPTSFNVQPYTVTIVQSEDTKQKLAACMLGPNSARVLQAPVTAVFAADLDPVQLVPRVQSLERRKRGLPEAYLATLPFSVAFLAGKGHLAHAFKDLFTTAMSPLQPMPSVSTLEAWSYKNTAIAASWYMLACSVHGLDTCPMEGFDGRRIMHELHIPASRYAIPLVVSTGFAMPLPSSSPERNKEAKRSPRFPPEAVVFKDQYGHAYKGI 319 A+ R++ KAF DA + D+TL IL LTLR PT FN QPY +V+ + ++KLA M+ N+ +V +APV AVFAAD +P + VPR+Q L G P +++ +P V +G+G +A + TA+SPLQP PS + EAW+YK T AA+ ++ A VHGL TCPMEGFD R+ + L IP RY +P+V++ G P P++ PE K S R P V F ++G + + I Sbjct: 41 AIQERYACKAFLPDA---VPDKTLQEILKLTLRAPTGFNTQPYACVLVREQKDREKLAEAMMDSNARKVKEAPVVAVFAADCEPSKRVPRLQKLAH-DNGAPVDFVSNMPHVVRLFSGEGVVASGLRAAIATAVSPLQPAPSNVSTEAWAYKQTTFAAATFLYAAQVHGLATCPMEGFDQIRVRNALDIP-DRYGVPVVIALGH--PNPAARPE-----KPSARLDPTEVFFDGKFGDSSEKI 271
BLAST of EWM28266.1 vs. NCBI_GenBank
Match: gi|298709419|emb|CBJ49232.1| (nitroreductase-like protein [Ectocarpus siliculosus]) HSP 1 Score: 187.578 bits (475), Expect = 8.828e-54 Identity = 102/255 (40.00%), Postives = 151/255 (59.22%), Query Frame = 0 Query: 75 AFKRAVLARHSTKAFDAKREIADETLAAILALTLRCPTSFNVQPYTVTIVQSEDTKQKLAACMLGPNSARVLQAPVTAVFAADLDPVQLVPRVQSLERRKRGLPEAYLATLPFSVAFLAGKGH-------LAHAFKDLFTTAMSPLQPMPSVSTLEAWSYKNTAIAASWYMLACSVHGLDTCPMEGFDGRRIMHELHIPASRYAIPLVVSTGFAMPLPSSSPERNKEAKRSPRFPPEAVVFKDQYGHAYKGISQL 322 AF+R LAR STK FD +R + D+ L +LAL LR P+ FN+QPY +V S++ K KL+ MLGPN RVL A T VFA+DL+ ++ V ++ ++ K G PE ++ +P ++ + GH L A K F + MP+VS EAW++K+T +A +LA + HGL TCPMEGFD RR+ L IP RY++P+VVS G+ P ++ ++ RFPPE V+ ++++G +G+ L Sbjct: 74 AFERVTLARRSTKHFDRRRPVPDDVLKKVLALVLRAPSGFNIQPYECIVVTSDEAKHKLSRAMLGPNRERVLAAGATVVFASDLNSMKNVRKLTTM-LAKEGWPEGFIKKVPLYLSVFS-TGHNRLLRLPLVAAKKLSFAVVRRLGKGMPTVSGAEAWAFKSTMLAVQELLLAATSHGLATCPMEGFDMRRLRKALRIPL-RYSVPIVVSIGY--------PSDDRREIKTLRFPPEEVLHREEFGTPLEGVPSL 317
BLAST of EWM28266.1 vs. NCBI_GenBank
Match: gi|1214684732|gb|OWZ02080.1| (Nitroreductase [Phytophthora megakarya]) HSP 1 Score: 183.341 bits (464), Expect = 1.447e-52 Identity = 102/241 (42.32%), Postives = 141/241 (58.51%), Query Frame = 0 Query: 79 AVLARHSTKAFDAKREIADETLAAILALTLRCPTSFNVQPYTVTIVQSEDTKQKLAACMLGPNSARVLQAPVTAVFAADLDPVQLVPRVQSLERRKRGLPEAYLATLPFSVAFLAGKGHLAHAFKDLFTTAMSPLQPMPSVSTLEAWSYKNTAIAASWYMLACSVHGLDTCPMEGFDGRRIMHELHIPASRYAIPLVVSTGFAMPLPSSSPERNKEAKRSPRFPPEAVVFKDQYGHAYKGI 319 A+ R++ KAF + DETL IL LTLR PT FN PY +V+ + ++KLA M+ N +V +APV AVFAADL+P Q VPR+Q L G +++ LP V +G+G +A A + TAMSPLQP+PS + EAW++K TA AA+ ++ A HGL TCPMEGFD R+ + L IP RY +P+V++ G P K K+S R P V F ++G + + I Sbjct: 40 AIKERYACKAF-LPTPVPDETLREILKLTLRGPTCFNTMPYACVLVREQKDREKLAEAMMDSNVRKVKEAPVVAVFAADLEPSQRVPRLQQLAH-DHGASVDFVSNLPHVVRLFSGEGVIASALRAAIATAMSPLQPVPSNVSTEAWAFKQTAFAAATFLYAAQAHGLATCPMEGFDQIRVRNALDIP-DRYGVPVVIALGHENP-------DFKPKKQSARLDPTEVFFDGKFGDSSEMI 270
BLAST of EWM28266.1 vs. NCBI_GenBank
Match: gi|970629523|gb|KUF76758.1| (NADH dehydrogenase [Phytophthora nicotianae] >gi|970657950|gb|KUF95774.1| hypothetical protein AM588_10006839 [Phytophthora nicotianae]) HSP 1 Score: 181.8 bits (460), Expect = 2.036e-52 Identity = 101/241 (41.91%), Postives = 143/241 (59.34%), Query Frame = 0 Query: 79 AVLARHSTKAFDAKREIADETLAAILALTLRCPTSFNVQPYTVTIVQSEDTKQKLAACMLGPNSARVLQAPVTAVFAADLDPVQLVPRVQSLERRKRGLPEAYLATLPFSVAFLAGKGHLAHAFKDLFTTAMSPLQPMPSVSTLEAWSYKNTAIAASWYMLACSVHGLDTCPMEGFDGRRIMHELHIPASRYAIPLVVSTGFAMPLPSSSPERNKEAKRSPRFPPEAVVFKDQYGHAYKGI 319 A+ R++ KAF + +ETL IL LT R PT FNVQPY +V+ + ++KLA M+ N +V +APV AVFAADL+P + VPR+Q L G P ++A +P V +G+G +A + TA+SPL P PS + EAW++K TA AA+ ++ A HGL TCPMEGFD R+ + L IP RY +P+V++ G A P + PE K S R P V F ++G++ + I Sbjct: 4 AIEERYACKAF-LPTPVPNETLKEILRLTQRAPTGFNVQPYACVLVREQKDREKLAEAMMDSNIRKVKEAPVVAVFAADLEPSKRVPRLQHL-MHDNGAPADFVANMPHVVRLFSGEGVVASTLRAAIATAVSPLMPAPSNVSTEAWAFKQTAFAAATFLYAAQTHGLATCPMEGFDQIRVRNALDIP-DRYGVPVVIALGHAN--PDAKPE-----KPSARLDPTEVFFDGKFGNSSEKI 234
BLAST of EWM28266.1 vs. NCBI_GenBank
Match: gi|219122385|ref|XP_002181526.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217406802|gb|EEC46740.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 181.415 bits (459), Expect = 4.876e-52 Identity = 102/250 (40.80%), Postives = 142/250 (56.80%), Query Frame = 0 Query: 66 SSLARAGISAFKRAVLARHSTKAFDAKREIADETLAAILALTLRCPTSFNVQPYTVTIVQSEDTKQKLA-ACMLGP-NSARVLQAPVTAVFAADLDPVQLVPRVQSLERRKRGLPEAYLATLPFSVAFLAGKGHLAHAFKDLFTTAMSPLQPMPSVSTLEAWSYKNTAIAASWYMLACSVHGLDTCPMEGFDGRRIMHELHIPASRYAIPLVVSTGFAMPLPSSSPERNKEAKRSPRFPPEAVVFKDQYG 313 +S+ +A + F+ R S K F +R+I E+L IL T+R P+SFN+QP + +VQ+ED K KLA M+GP N R Q AVF ADL+ + + R+Q LE+ Y AT+P + +FL G+GH A K L MS LQPMP+ +E W+YKNT++A + LA + H L T MEGFD RR LHIP RY IP++V+ G+ P++S +PR + VVF D +G Sbjct: 3 TSITKAAV--FRAIAQTRRSCKRFQPERKIPPESLKDILHSTIRAPSSFNLQPTQIIVVQNEDRKNKLAETAMIGPGNQFRTRQCSALAVFLADLEASKRISRIQELEKDWGQRDPTYSATMPLTTSFLIGEGHAATLLKSLAIRTMSELQPMPTAEPVETWAYKNTSLAVQSFTLAAASHDLATSIMEGFDARRAKEVLHIP-DRYGIPMMVAVGYEYEDPTTS------QSLTPRLDMQEVVFGDSFG 243
BLAST of EWM28266.1 vs. NCBI_GenBank
Match: gi|570973268|gb|ETP35937.1| (hypothetical protein F442_15999 [Phytophthora parasitica P10297]) HSP 1 Score: 181.415 bits (459), Expect = 5.005e-52 Identity = 104/249 (41.77%), Postives = 147/249 (59.04%), Query Frame = 0 Query: 74 SAFKR---AVLARHSTKAFDAKREIADETLAAILALTLRCPTSFNVQPYTVTIVQSEDTKQKLAACMLGPNSARVLQAPVTAVFAADLDPVQLVPRVQSLERRKRGLPEAYLATLPFSVAFLAGKGHLAHAFKDLFTTAMSPLQPMPSVSTLEAWSYKNTAIAASWYMLACSVHGLDTCPMEGFDGRRIMHELHIPASRYAIPLVVSTGFAMPLPSSSPERNKEAKRSPRFPPEAVVFKDQYGHAYKGI 319 SA KR A+ R++ KAF + +ETL IL LT R PT FNVQPY +V+ + ++KLA M+ N +V +APV AVFAADL+P + VPR+Q L G P ++A +P V +G+G +A + TA+SPL P PS + EAW++K TA AA+ ++ A HGL TCPMEGFD R+ + L IP RY +P+V++ G A P + PE K S R P + F ++G++ + I Sbjct: 21 SAQKRMGAAIEERYACKAF-LPTPVPNETLKEILRLTQRAPTGFNVQPYACVLVREQKDREKLAEAMMDSNIRKVKEAPVVAVFAADLEPSKRVPRLQHL-MHDNGAPADFVANMPHVVRLFSGEGVVASTLRAAIATAVSPLMPAPSNVSTEAWAFKQTAFAAATFLYAAQTHGLATCPMEGFDQIRVRNALDIP-DRYGVPVVIALGHAN--PDAKPE-----KPSARLDPTEIFFDGKFGNSSEKI 259
BLAST of EWM28266.1 vs. NCBI_GenBank
Match: gi|568010707|gb|ETL84890.1| (hypothetical protein L917_15410, partial [Phytophthora parasitica]) HSP 1 Score: 181.415 bits (459), Expect = 8.278e-52 Identity = 104/249 (41.77%), Postives = 147/249 (59.04%), Query Frame = 0 Query: 74 SAFKR---AVLARHSTKAFDAKREIADETLAAILALTLRCPTSFNVQPYTVTIVQSEDTKQKLAACMLGPNSARVLQAPVTAVFAADLDPVQLVPRVQSLERRKRGLPEAYLATLPFSVAFLAGKGHLAHAFKDLFTTAMSPLQPMPSVSTLEAWSYKNTAIAASWYMLACSVHGLDTCPMEGFDGRRIMHELHIPASRYAIPLVVSTGFAMPLPSSSPERNKEAKRSPRFPPEAVVFKDQYGHAYKGI 319 SA KR A+ R++ KAF + +ETL IL LT R PT FNVQPY +V+ + ++KLA M+ N +V +APV AVFAADL+P + VPR+Q L G P ++A +P V +G+G +A + TA+SPL P PS + EAW++K TA AA+ ++ A HGL TCPMEGFD R+ + L IP RY +P+V++ G A P + PE K S R P + F ++G++ + I Sbjct: 37 SAQKRMGAAIEERYACKAF-LPTPVPNETLKEILRLTQRAPTGFNVQPYACVLVREQKDREKLAEAMMDSNIRKVKEAPVVAVFAADLEPSKRVPRLQHL-MHDNGAPADFVANMPHVVRLFSGEGVVASTLRAAIATAVSPLMPAPSNVSTEAWAFKQTAFAAATFLYAAQTHGLATCPMEGFDQIRVRNALDIP-DRYGVPVVIALGHAN--PDAKPE-----KPSARLDPTEIFFDGKFGNSSEKI 275
BLAST of EWM28266.1 vs. NCBI_GenBank
Match: gi|301108053|ref|XP_002903108.1| (nitroreductase family, putative [Phytophthora infestans T30-4] >gi|262097480|gb|EEY55532.1| nitroreductase family, putative [Phytophthora infestans T30-4]) HSP 1 Score: 179.489 bits (454), Expect = 2.982e-51 Identity = 100/241 (41.49%), Postives = 140/241 (58.09%), Query Frame = 0 Query: 79 AVLARHSTKAFDAKREIADETLAAILALTLRCPTSFNVQPYTVTIVQSEDTKQKLAACMLGPNSARVLQAPVTAVFAADLDPVQLVPRVQSLERRKRGLPEAYLATLPFSVAFLAGKGHLAHAFKDLFTTAMSPLQPMPSVSTLEAWSYKNTAIAASWYMLACSVHGLDTCPMEGFDGRRIMHELHIPASRYAIPLVVSTGFAMPLPSSSPERNKEAKRSPRFPPEAVVFKDQYGHAYKGI 319 A+ R++ KAF ++DETL IL LTLR PT FNVQPY +V+ ++KLA M+ N +V +APV AVFAADL+P + VPR+Q L G ++A LP V +G+G +A + TA+SPL P+PS + EAW++K TA AA+ ++ A H L TCPMEGFD R+ + L IP RY +P+V++ G A P K K S R P + F ++G++ I Sbjct: 29 AIEERYACKAF-LSTPVSDETLKEILKLTLRAPTGFNVQPYACVLVREPKDREKLAEAMMDSNIRKVKEAPVVAVFAADLEPSKRVPRLQQLA-HDNGASADFVANLPHFVRLFSGEGVVASGLRAAIATAVSPLLPVPSNVSTEAWAFKQTAFAAATFLYAAQAHDLATCPMEGFDQIRVRNALDIP-DRYGVPVVIALGHANP-------DAKPQKPSVRLDPTEIFFDGKFGNSSDKI 259 The following BLAST results are available for this feature:
BLAST of EWM28266.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|