EWM28266.1, cds2430 (CDS) Nannochloropsis gaditana

Overview
NameEWM28266.1
Unique Namecds2430
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:387913..388881 -

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Properties
Property NameValue
Protein idEWM28266.1
Productnitroreductase-like protein
Orig transcript idgnl|cribi|Naga_100004g73.9197.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:387913..388881 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0016491oxidoreductase activity
Vocabulary: INTERPRO
TermDefinition
IPR000415Nitroreductase-like
IPR029479Nitroreductase
Homology
BLAST of EWM28266.1 vs. NCBI_GenBank
Match: gi|585110611|gb|EWM28266.1| (nitroreductase-like protein [Nannochloropsis gaditana])

HSP 1 Score: 662.529 bits (1708), Expect = 0.000e+0
Identity = 322/322 (100.00%), Postives = 322/322 (100.00%), Query Frame = 0
Query:    1 MTFLPFHHLVTRRLGMYRSGGKGAWLFLPTSSSARSRPGRLRPFHAAFSTSAGAQHSEEENEDHESSLARAGISAFKRAVLARHSTKAFDAKREIADETLAAILALTLRCPTSFNVQPYTVTIVQSEDTKQKLAACMLGPNSARVLQAPVTAVFAADLDPVQLVPRVQSLERRKRGLPEAYLATLPFSVAFLAGKGHLAHAFKDLFTTAMSPLQPMPSVSTLEAWSYKNTAIAASWYMLACSVHGLDTCPMEGFDGRRIMHELHIPASRYAIPLVVSTGFAMPLPSSSPERNKEAKRSPRFPPEAVVFKDQYGHAYKGISQL 322
            MTFLPFHHLVTRRLGMYRSGGKGAWLFLPTSSSARSRPGRLRPFHAAFSTSAGAQHSEEENEDHESSLARAGISAFKRAVLARHSTKAFDAKREIADETLAAILALTLRCPTSFNVQPYTVTIVQSEDTKQKLAACMLGPNSARVLQAPVTAVFAADLDPVQLVPRVQSLERRKRGLPEAYLATLPFSVAFLAGKGHLAHAFKDLFTTAMSPLQPMPSVSTLEAWSYKNTAIAASWYMLACSVHGLDTCPMEGFDGRRIMHELHIPASRYAIPLVVSTGFAMPLPSSSPERNKEAKRSPRFPPEAVVFKDQYGHAYKGISQL
Sbjct:    1 MTFLPFHHLVTRRLGMYRSGGKGAWLFLPTSSSARSRPGRLRPFHAAFSTSAGAQHSEEENEDHESSLARAGISAFKRAVLARHSTKAFDAKREIADETLAAILALTLRCPTSFNVQPYTVTIVQSEDTKQKLAACMLGPNSARVLQAPVTAVFAADLDPVQLVPRVQSLERRKRGLPEAYLATLPFSVAFLAGKGHLAHAFKDLFTTAMSPLQPMPSVSTLEAWSYKNTAIAASWYMLACSVHGLDTCPMEGFDGRRIMHELHIPASRYAIPLVVSTGFAMPLPSSSPERNKEAKRSPRFPPEAVVFKDQYGHAYKGISQL 322          
BLAST of EWM28266.1 vs. NCBI_GenBank
Match: gi|299116515|emb|CBN76229.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 213.001 bits (541), Expect = 1.588e-63
Identity = 115/290 (39.66%), Postives = 169/290 (58.28%), Query Frame = 0
Query:   33 SARSRPGRLRPFHAAFSTSAGAQHSEEENED---HESSLARAGISAFKRAVLARHSTKAFDAKREIADETLAAILALTLRCPTSFNVQPYTVTIVQSEDTKQKLAACMLGPNSARVLQAPVTAVFAADLDPVQLVPRVQSLERRKRGLPEAYLATLPFSVAFLAGKGHLAHAFKDLFTTAMSPLQPMPSVSTLEAWSYKNTAIAASWYMLACSVHGLDTCPMEGFDGRRIMHELHIPASRYAIPLVVSTGFAMPLPSSSPERNKEAKRSPRFPPEAVVFKDQYGHAYKGI 319
            S RS   RLR          G   + +E+ D   + SSL+  G+ AF+  V +R +  +F +  E+    L  I+ALT   P+SFN+QP++V +V+    +++L+  MLG N+ +VL APVTAVF ADL+P + + R+  L R K G+PEA +     +V   +G+G + +A ++  TT  SP+QP P V++ EAWS+KNTA+A   Y+L+C+ HGLDT PMEGFD RR+   L IP  RY IP++V TG+  P             R  R+PP+ VVF   +G    G+
Sbjct:   34 SVRSSSPRLR---------QGEDANLQEDADLSGNSSSLSPEGLKAFRDVVTSRTAAISF-SDEEVDPPALREIMALTQSAPSSFNIQPWSVVVVRDTAARERLSTAMLGGNAKKVLAAPVTAVFCADLEPSKRINRMVELNR-KAGMPEAEITKFCLAVNLFSGEGVVGNAVRNAVTTIASPMQPAPEVASAEAWSFKNTALAVQTYILSCTAHGLDTAPMEGFDARRVRAALDIP-DRYGIPIIVPTGYPAPSKPEGQGGGGGVARRWRYPPQEVVFDGTFGVGMTGV 311          
BLAST of EWM28266.1 vs. NCBI_GenBank
Match: gi|695432281|ref|XP_009530894.1| (hypothetical protein PHYSODRAFT_260100 [Phytophthora sojae] >gi|348673646|gb|EGZ13465.1| hypothetical protein PHYSODRAFT_260100 [Phytophthora sojae])

HSP 1 Score: 186.808 bits (473), Expect = 6.511e-54
Identity = 103/243 (42.39%), Postives = 146/243 (60.08%), Query Frame = 0
Query:   79 AVLARHSTKAF--DAKREIADETLAAILALTLRCPTSFNVQPYTVTIVQSEDTKQKLAACMLGPNSARVLQAPVTAVFAADLDPVQLVPRVQSLERRKRGLPEAYLATLPFSVAFLAGKGHLAHAFKDLFTTAMSPLQPMPSVSTLEAWSYKNTAIAASWYMLACSVHGLDTCPMEGFDGRRIMHELHIPASRYAIPLVVSTGFAMPLPSSSPERNKEAKRSPRFPPEAVVFKDQYGHAYKGI 319
            A+  R++ KAF  DA   + D+TL  IL LTLR PT FN QPY   +V+ +  ++KLA  M+  N+ +V +APV AVFAAD +P + VPR+Q L     G P  +++ +P  V   +G+G +A   +    TA+SPLQP PS  + EAW+YK T  AA+ ++ A  VHGL TCPMEGFD  R+ + L IP  RY +P+V++ G   P P++ PE     K S R  P  V F  ++G + + I
Sbjct:   41 AIQERYACKAFLPDA---VPDKTLQEILKLTLRAPTGFNTQPYACVLVREQKDREKLAEAMMDSNARKVKEAPVVAVFAADCEPSKRVPRLQKLAH-DNGAPVDFVSNMPHVVRLFSGEGVVASGLRAAIATAVSPLQPAPSNVSTEAWAYKQTTFAAATFLYAAQVHGLATCPMEGFDQIRVRNALDIP-DRYGVPVVIALGH--PNPAARPE-----KPSARLDPTEVFFDGKFGDSSEKI 271          
BLAST of EWM28266.1 vs. NCBI_GenBank
Match: gi|298709419|emb|CBJ49232.1| (nitroreductase-like protein [Ectocarpus siliculosus])

HSP 1 Score: 187.578 bits (475), Expect = 8.828e-54
Identity = 102/255 (40.00%), Postives = 151/255 (59.22%), Query Frame = 0
Query:   75 AFKRAVLARHSTKAFDAKREIADETLAAILALTLRCPTSFNVQPYTVTIVQSEDTKQKLAACMLGPNSARVLQAPVTAVFAADLDPVQLVPRVQSLERRKRGLPEAYLATLPFSVAFLAGKGH-------LAHAFKDLFTTAMSPLQPMPSVSTLEAWSYKNTAIAASWYMLACSVHGLDTCPMEGFDGRRIMHELHIPASRYAIPLVVSTGFAMPLPSSSPERNKEAKRSPRFPPEAVVFKDQYGHAYKGISQL 322
            AF+R  LAR STK FD +R + D+ L  +LAL LR P+ FN+QPY   +V S++ K KL+  MLGPN  RVL A  T VFA+DL+ ++ V ++ ++   K G PE ++  +P  ++  +  GH       L  A K  F       + MP+VS  EAW++K+T +A    +LA + HGL TCPMEGFD RR+   L IP  RY++P+VVS G+        P  ++   ++ RFPPE V+ ++++G   +G+  L
Sbjct:   74 AFERVTLARRSTKHFDRRRPVPDDVLKKVLALVLRAPSGFNIQPYECIVVTSDEAKHKLSRAMLGPNRERVLAAGATVVFASDLNSMKNVRKLTTM-LAKEGWPEGFIKKVPLYLSVFS-TGHNRLLRLPLVAAKKLSFAVVRRLGKGMPTVSGAEAWAFKSTMLAVQELLLAATSHGLATCPMEGFDMRRLRKALRIPL-RYSVPIVVSIGY--------PSDDRREIKTLRFPPEEVLHREEFGTPLEGVPSL 317          
BLAST of EWM28266.1 vs. NCBI_GenBank
Match: gi|1214684732|gb|OWZ02080.1| (Nitroreductase [Phytophthora megakarya])

HSP 1 Score: 183.341 bits (464), Expect = 1.447e-52
Identity = 102/241 (42.32%), Postives = 141/241 (58.51%), Query Frame = 0
Query:   79 AVLARHSTKAFDAKREIADETLAAILALTLRCPTSFNVQPYTVTIVQSEDTKQKLAACMLGPNSARVLQAPVTAVFAADLDPVQLVPRVQSLERRKRGLPEAYLATLPFSVAFLAGKGHLAHAFKDLFTTAMSPLQPMPSVSTLEAWSYKNTAIAASWYMLACSVHGLDTCPMEGFDGRRIMHELHIPASRYAIPLVVSTGFAMPLPSSSPERNKEAKRSPRFPPEAVVFKDQYGHAYKGI 319
            A+  R++ KAF     + DETL  IL LTLR PT FN  PY   +V+ +  ++KLA  M+  N  +V +APV AVFAADL+P Q VPR+Q L     G    +++ LP  V   +G+G +A A +    TAMSPLQP+PS  + EAW++K TA AA+ ++ A   HGL TCPMEGFD  R+ + L IP  RY +P+V++ G   P         K  K+S R  P  V F  ++G + + I
Sbjct:   40 AIKERYACKAF-LPTPVPDETLREILKLTLRGPTCFNTMPYACVLVREQKDREKLAEAMMDSNVRKVKEAPVVAVFAADLEPSQRVPRLQQLAH-DHGASVDFVSNLPHVVRLFSGEGVIASALRAAIATAMSPLQPVPSNVSTEAWAFKQTAFAAATFLYAAQAHGLATCPMEGFDQIRVRNALDIP-DRYGVPVVIALGHENP-------DFKPKKQSARLDPTEVFFDGKFGDSSEMI 270          
BLAST of EWM28266.1 vs. NCBI_GenBank
Match: gi|970629523|gb|KUF76758.1| (NADH dehydrogenase [Phytophthora nicotianae] >gi|970657950|gb|KUF95774.1| hypothetical protein AM588_10006839 [Phytophthora nicotianae])

HSP 1 Score: 181.8 bits (460), Expect = 2.036e-52
Identity = 101/241 (41.91%), Postives = 143/241 (59.34%), Query Frame = 0
Query:   79 AVLARHSTKAFDAKREIADETLAAILALTLRCPTSFNVQPYTVTIVQSEDTKQKLAACMLGPNSARVLQAPVTAVFAADLDPVQLVPRVQSLERRKRGLPEAYLATLPFSVAFLAGKGHLAHAFKDLFTTAMSPLQPMPSVSTLEAWSYKNTAIAASWYMLACSVHGLDTCPMEGFDGRRIMHELHIPASRYAIPLVVSTGFAMPLPSSSPERNKEAKRSPRFPPEAVVFKDQYGHAYKGI 319
            A+  R++ KAF     + +ETL  IL LT R PT FNVQPY   +V+ +  ++KLA  M+  N  +V +APV AVFAADL+P + VPR+Q L     G P  ++A +P  V   +G+G +A   +    TA+SPL P PS  + EAW++K TA AA+ ++ A   HGL TCPMEGFD  R+ + L IP  RY +P+V++ G A   P + PE     K S R  P  V F  ++G++ + I
Sbjct:    4 AIEERYACKAF-LPTPVPNETLKEILRLTQRAPTGFNVQPYACVLVREQKDREKLAEAMMDSNIRKVKEAPVVAVFAADLEPSKRVPRLQHL-MHDNGAPADFVANMPHVVRLFSGEGVVASTLRAAIATAVSPLMPAPSNVSTEAWAFKQTAFAAATFLYAAQTHGLATCPMEGFDQIRVRNALDIP-DRYGVPVVIALGHAN--PDAKPE-----KPSARLDPTEVFFDGKFGNSSEKI 234          
BLAST of EWM28266.1 vs. NCBI_GenBank
Match: gi|219122385|ref|XP_002181526.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217406802|gb|EEC46740.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 181.415 bits (459), Expect = 4.876e-52
Identity = 102/250 (40.80%), Postives = 142/250 (56.80%), Query Frame = 0
Query:   66 SSLARAGISAFKRAVLARHSTKAFDAKREIADETLAAILALTLRCPTSFNVQPYTVTIVQSEDTKQKLA-ACMLGP-NSARVLQAPVTAVFAADLDPVQLVPRVQSLERRKRGLPEAYLATLPFSVAFLAGKGHLAHAFKDLFTTAMSPLQPMPSVSTLEAWSYKNTAIAASWYMLACSVHGLDTCPMEGFDGRRIMHELHIPASRYAIPLVVSTGFAMPLPSSSPERNKEAKRSPRFPPEAVVFKDQYG 313
            +S+ +A +  F+     R S K F  +R+I  E+L  IL  T+R P+SFN+QP  + +VQ+ED K KLA   M+GP N  R  Q    AVF ADL+  + + R+Q LE+        Y AT+P + +FL G+GH A   K L    MS LQPMP+   +E W+YKNT++A   + LA + H L T  MEGFD RR    LHIP  RY IP++V+ G+    P++S         +PR   + VVF D +G
Sbjct:    3 TSITKAAV--FRAIAQTRRSCKRFQPERKIPPESLKDILHSTIRAPSSFNLQPTQIIVVQNEDRKNKLAETAMIGPGNQFRTRQCSALAVFLADLEASKRISRIQELEKDWGQRDPTYSATMPLTTSFLIGEGHAATLLKSLAIRTMSELQPMPTAEPVETWAYKNTSLAVQSFTLAAASHDLATSIMEGFDARRAKEVLHIP-DRYGIPMMVAVGYEYEDPTTS------QSLTPRLDMQEVVFGDSFG 243          
BLAST of EWM28266.1 vs. NCBI_GenBank
Match: gi|570973268|gb|ETP35937.1| (hypothetical protein F442_15999 [Phytophthora parasitica P10297])

HSP 1 Score: 181.415 bits (459), Expect = 5.005e-52
Identity = 104/249 (41.77%), Postives = 147/249 (59.04%), Query Frame = 0
Query:   74 SAFKR---AVLARHSTKAFDAKREIADETLAAILALTLRCPTSFNVQPYTVTIVQSEDTKQKLAACMLGPNSARVLQAPVTAVFAADLDPVQLVPRVQSLERRKRGLPEAYLATLPFSVAFLAGKGHLAHAFKDLFTTAMSPLQPMPSVSTLEAWSYKNTAIAASWYMLACSVHGLDTCPMEGFDGRRIMHELHIPASRYAIPLVVSTGFAMPLPSSSPERNKEAKRSPRFPPEAVVFKDQYGHAYKGI 319
            SA KR   A+  R++ KAF     + +ETL  IL LT R PT FNVQPY   +V+ +  ++KLA  M+  N  +V +APV AVFAADL+P + VPR+Q L     G P  ++A +P  V   +G+G +A   +    TA+SPL P PS  + EAW++K TA AA+ ++ A   HGL TCPMEGFD  R+ + L IP  RY +P+V++ G A   P + PE     K S R  P  + F  ++G++ + I
Sbjct:   21 SAQKRMGAAIEERYACKAF-LPTPVPNETLKEILRLTQRAPTGFNVQPYACVLVREQKDREKLAEAMMDSNIRKVKEAPVVAVFAADLEPSKRVPRLQHL-MHDNGAPADFVANMPHVVRLFSGEGVVASTLRAAIATAVSPLMPAPSNVSTEAWAFKQTAFAAATFLYAAQTHGLATCPMEGFDQIRVRNALDIP-DRYGVPVVIALGHAN--PDAKPE-----KPSARLDPTEIFFDGKFGNSSEKI 259          
BLAST of EWM28266.1 vs. NCBI_GenBank
Match: gi|568010707|gb|ETL84890.1| (hypothetical protein L917_15410, partial [Phytophthora parasitica])

HSP 1 Score: 181.415 bits (459), Expect = 8.278e-52
Identity = 104/249 (41.77%), Postives = 147/249 (59.04%), Query Frame = 0
Query:   74 SAFKR---AVLARHSTKAFDAKREIADETLAAILALTLRCPTSFNVQPYTVTIVQSEDTKQKLAACMLGPNSARVLQAPVTAVFAADLDPVQLVPRVQSLERRKRGLPEAYLATLPFSVAFLAGKGHLAHAFKDLFTTAMSPLQPMPSVSTLEAWSYKNTAIAASWYMLACSVHGLDTCPMEGFDGRRIMHELHIPASRYAIPLVVSTGFAMPLPSSSPERNKEAKRSPRFPPEAVVFKDQYGHAYKGI 319
            SA KR   A+  R++ KAF     + +ETL  IL LT R PT FNVQPY   +V+ +  ++KLA  M+  N  +V +APV AVFAADL+P + VPR+Q L     G P  ++A +P  V   +G+G +A   +    TA+SPL P PS  + EAW++K TA AA+ ++ A   HGL TCPMEGFD  R+ + L IP  RY +P+V++ G A   P + PE     K S R  P  + F  ++G++ + I
Sbjct:   37 SAQKRMGAAIEERYACKAF-LPTPVPNETLKEILRLTQRAPTGFNVQPYACVLVREQKDREKLAEAMMDSNIRKVKEAPVVAVFAADLEPSKRVPRLQHL-MHDNGAPADFVANMPHVVRLFSGEGVVASTLRAAIATAVSPLMPAPSNVSTEAWAFKQTAFAAATFLYAAQTHGLATCPMEGFDQIRVRNALDIP-DRYGVPVVIALGHAN--PDAKPE-----KPSARLDPTEIFFDGKFGNSSEKI 275          
BLAST of EWM28266.1 vs. NCBI_GenBank
Match: gi|301108053|ref|XP_002903108.1| (nitroreductase family, putative [Phytophthora infestans T30-4] >gi|262097480|gb|EEY55532.1| nitroreductase family, putative [Phytophthora infestans T30-4])

HSP 1 Score: 179.489 bits (454), Expect = 2.982e-51
Identity = 100/241 (41.49%), Postives = 140/241 (58.09%), Query Frame = 0
Query:   79 AVLARHSTKAFDAKREIADETLAAILALTLRCPTSFNVQPYTVTIVQSEDTKQKLAACMLGPNSARVLQAPVTAVFAADLDPVQLVPRVQSLERRKRGLPEAYLATLPFSVAFLAGKGHLAHAFKDLFTTAMSPLQPMPSVSTLEAWSYKNTAIAASWYMLACSVHGLDTCPMEGFDGRRIMHELHIPASRYAIPLVVSTGFAMPLPSSSPERNKEAKRSPRFPPEAVVFKDQYGHAYKGI 319
            A+  R++ KAF     ++DETL  IL LTLR PT FNVQPY   +V+    ++KLA  M+  N  +V +APV AVFAADL+P + VPR+Q L     G    ++A LP  V   +G+G +A   +    TA+SPL P+PS  + EAW++K TA AA+ ++ A   H L TCPMEGFD  R+ + L IP  RY +P+V++ G A P         K  K S R  P  + F  ++G++   I
Sbjct:   29 AIEERYACKAF-LSTPVSDETLKEILKLTLRAPTGFNVQPYACVLVREPKDREKLAEAMMDSNIRKVKEAPVVAVFAADLEPSKRVPRLQQLA-HDNGASADFVANLPHFVRLFSGEGVVASGLRAAIATAVSPLLPVPSNVSTEAWAFKQTAFAAATFLYAAQAHDLATCPMEGFDQIRVRNALDIP-DRYGVPVVIALGHANP-------DAKPQKPSVRLDPTEIFFDGKFGNSSDKI 259          
The following BLAST results are available for this feature:
BLAST of EWM28266.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585110611|gb|EWM28266.1|0.000e+0100.00nitroreductase-like protein [Nannochloropsis gadit... [more]
gi|299116515|emb|CBN76229.1|1.588e-6339.66conserved unknown protein [Ectocarpus siliculosus][more]
gi|695432281|ref|XP_009530894.1|6.511e-5442.39hypothetical protein PHYSODRAFT_260100 [Phytophtho... [more]
gi|298709419|emb|CBJ49232.1|8.828e-5440.00nitroreductase-like protein [Ectocarpus siliculosu... [more]
gi|1214684732|gb|OWZ02080.1|1.447e-5242.32Nitroreductase [Phytophthora megakarya][more]
gi|970629523|gb|KUF76758.1|2.036e-5241.91NADH dehydrogenase [Phytophthora nicotianae] >gi|9... [more]
gi|219122385|ref|XP_002181526.1|4.876e-5240.80predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|570973268|gb|ETP35937.1|5.005e-5241.77hypothetical protein F442_15999 [Phytophthora para... [more]
gi|568010707|gb|ETL84890.1|8.278e-5241.77hypothetical protein L917_15410, partial [Phytopht... [more]
gi|301108053|ref|XP_002903108.1|2.982e-5141.49nitroreductase family, putative [Phytophthora infe... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2438rna2438Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications