EWM28276.1, cds2429 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28276.1 vs. NCBI_GenBank
Match: gi|585110621|gb|EWM28276.1| (putative ubiquinone menaquinone biosynthesis methyltransferase [Nannochloropsis gaditana]) HSP 1 Score: 549.666 bits (1415), Expect = 0.000e+0 Identity = 263/263 (100.00%), Postives = 263/263 (100.00%), Query Frame = 0
Query: 1 MSSSNAPQIKVPIVDYCPPSTFGTDMKVLKHMWFAKIVPGQSQQDRLESFYKEQADLYDSYRFRMLHGRLPMVKAMPIPPKGEGVWLDVGGGTGSNLEYFAENLNHFAKVMVLDLCPSLAAQAQERVARHAGWSEFVKVIVADACDAEAPGLPSPGSVDLITFSYALSMIPDWEAALRNAKRLLKKGGHVCVCDFTVDNSQGWGMQTFWANVFASDHVYLRPERRPFLREEFVSVHEELGFGTFPYVPPVLQAPWYVFIGRKE 263
MSSSNAPQIKVPIVDYCPPSTFGTDMKVLKHMWFAKIVPGQSQQDRLESFYKEQADLYDSYRFRMLHGRLPMVKAMPIPPKGEGVWLDVGGGTGSNLEYFAENLNHFAKVMVLDLCPSLAAQAQERVARHAGWSEFVKVIVADACDAEAPGLPSPGSVDLITFSYALSMIPDWEAALRNAKRLLKKGGHVCVCDFTVDNSQGWGMQTFWANVFASDHVYLRPERRPFLREEFVSVHEELGFGTFPYVPPVLQAPWYVFIGRKE
Sbjct: 1 MSSSNAPQIKVPIVDYCPPSTFGTDMKVLKHMWFAKIVPGQSQQDRLESFYKEQADLYDSYRFRMLHGRLPMVKAMPIPPKGEGVWLDVGGGTGSNLEYFAENLNHFAKVMVLDLCPSLAAQAQERVARHAGWSEFVKVIVADACDAEAPGLPSPGSVDLITFSYALSMIPDWEAALRNAKRLLKKGGHVCVCDFTVDNSQGWGMQTFWANVFASDHVYLRPERRPFLREEFVSVHEELGFGTFPYVPPVLQAPWYVFIGRKE 263
BLAST of EWM28276.1 vs. NCBI_GenBank
Match: gi|551653347|ref|XP_005829451.1| (hypothetical protein GUITHDRAFT_111444 [Guillardia theta CCMP2712] >gi|428173570|gb|EKX42471.1| hypothetical protein GUITHDRAFT_111444 [Guillardia theta CCMP2712]) HSP 1 Score: 241.506 bits (615), Expect = 1.585e-75 Identity = 126/258 (48.84%), Postives = 168/258 (65.12%), Query Frame = 0
Query: 9 IKVPIVDYCPPSTFGTDMKVLKHMWFAKIVPGQSQQDRLESFYKEQADLYDSYRFRMLHGRLPMVKAMPIPPKGEGVWLDVGGGTGSNLEYFAENLNH--FAKVMVLDLCPSLAAQAQERVARHAGWSEFVKVIVADACDAEAPGLPSPGSVDLITFSYALSMIPDWEAALRNAKRLLKKGGHVCVCDFTVDNSQG-WGM-QTFWANVFASDHVYLRPERRPFLREEFVSVHEELGFGTFPYVPPVLQAPWYVFIGRK 262
+ +P ++ + F DM+VLK MWF+KI G + QD LESFY QA LYD YR RMLH R PM+K + I VW+D+GGGTGS++EY + L+ F+ V+VLDLCPSL A+ER + W VK ++ DAC+ GLP GS DL+TFSY+L MIPDW+ A+ NA RLL+ GG +CVCDFTV +G W + Q W +FA DHV+L E +L+ E+ GFG+FPYV P+L+A WY ++G+K
Sbjct: 67 VCLPFSEFNVQNNFSEDMQVLKSMWFSKI-SGSAHQDILESFYSPQAKLYDGYRSRMLHARPPMMKNLSI------VWVDLGGGTGSSVEYMSNALDEGWFSSVVVLDLCPSLHKIAEERAKK---WPGIVKAVLGDACNQNEEGLPPAGSCDLVTFSYSLVMIPDWKGAIANALRLLRPGGRLCVCDFTVLPQKGQWTVTQEMWKRIFARDHVHLSDEHLKYLKSVTEPEKEDCGFGSFPYV-PLLKAGWYWYVGKK 313
BLAST of EWM28276.1 vs. NCBI_GenBank
Match: gi|1099564715|emb|SFH83924.1| (S-adenosylmethionine-diacylgycerolhomoserine-N-methlytransferase [Planctomicrobium piriforme]) HSP 1 Score: 188.734 bits (478), Expect = 7.873e-56 Identity = 104/248 (41.94%), Postives = 146/248 (58.87%), Query Frame = 0
Query: 24 TDMKVLKHMWFAKIVPGQSQQDRLESFYKEQADLYDSYRFRMLHGRLPMVKAMPIPPKGEGVWLDVGGGTGSNLEYFAENLNHFAKVMVLDLCPSLAAQAQERVARHAGWSEFVKVIVADACDAEAPGLPSPGSVDLITFSYALSMIPDWEAALRNAKRLLKKGGHVCVCDFTV--------DNSQGWGMQTFWANVFASDHVYLRPERRPFLREEFVSVHEELGFGTFPYVPPVLQAPWYVFIGRKE 263
D+K L H+ A+ G + Q+RLESFY QA+ YD +R RMLH R M++++P+P G VW+D+G GTG N E+ +N +K+ ++DL SL QAQ RV + GW V V C +P GSVD++TFSY+L+MIPDW A+ +A LLK GG + + DF V GW +TFW F SD+V+L P+ P+L+ +F +V G PY+ P ++AP YVFIG+K
Sbjct: 6 NDLKTLWHL-VARRASGSTHQERLESFYSGQANGYDDFRRRMLHSRQEMIQSVPVPQGG--VWVDLGAGTGENAEHLGPRINDLSKMYLVDLSTSLLEQAQARV-QARGWQNVVPV-----CHDATTFVPPEGSVDVVTFSYSLTMIPDWFRAMDHAYSLLKPGGSIGIVDFFVARKYPGDGHTPHGWSTRTFWPPWFGSDNVFLSPDHIPYLKNKFETVMLSERRGKIPYL-PFVRAPHYVFIGKKR 243
BLAST of EWM28276.1 vs. NCBI_GenBank
Match: gi|494551698|ref|WP_007331853.1| (class I SAM-dependent methyltransferase [Rhodopirellula baltica] >gi|408498171|gb|EKK02675.1| protein containing Methyltransferase type 11 domain protein [Rhodopirellula baltica SH28]) HSP 1 Score: 179.104 bits (453), Expect = 4.921e-52 Identity = 107/253 (42.29%), Postives = 148/253 (58.50%), Query Frame = 0
Query: 18 PPSTFGTDMKVLKHMWFAKIVPGQSQQDRLESFYKEQADLYDSYRFRMLHGRLPMVKAMPIPPKGEGVWLDVGGGTGSNLEYFAENLNHFAKVMVLDLCPSLAAQAQERVARHAGWSEFVKVIVADACDAEAPGLPSPGSVDLITFSYALSMIPDWEAALRNAKRLLKKGGHVCVCDFTV--------DNSQGWGMQTFWANVFASDHVYLRPERRPFLREEFVSVHEELGFGTFPYVPPVLQAPWYVFIGRK 262
P S FG D+KVL H+ F + V G + +RLESFY+ QA YDS+R R+LHGR ++ + P G VW+D G GTG NL E A+V ++DL PSL A ER+ + V + ADA E P SVD++TFSY+L+MIPDW ++ A+R+LK GG + V DF V GW +TFW+ FASD+VYL + LR +F + E G+ PY+ P+++AP+Y+F+GRK
Sbjct: 7 PTSRFG-DLKVLWHLLF-RPVRGNTHGERLESFYEGQASHYDSFRARLLHGRSELMSCVDFPDNG--VWVDFGAGTGHNLFSIEERSKSLAEVHLVDLSPSLLQIASERIEERQLSN--VTLHHADATQFELP----ENSVDVVTFSYSLTMIPDWFESVLIARRILKPGGMIAVTDFHVSRKHAAAPSRQHGWLRRTFWSLWFASDNVYLSSDHLAMLRRQFKTERCEERLGSVPYM-PLVKAPYYLFLGRK 248
BLAST of EWM28276.1 vs. NCBI_GenBank
Match: gi|1015453683|gb|AMV35466.1| (Demethylmenaquinone methyltransferase [Pirellula sp. SH-Sr6A]) HSP 1 Score: 178.333 bits (451), Expect = 6.748e-52 Identity = 98/250 (39.20%), Postives = 152/250 (60.80%), Query Frame = 0
Query: 21 TFGTDMKVLKHMWFAKIVPGQSQQDRLESFYKEQADLYDSYRFRMLHGRLPMVKAMPIPPKGEGVWLDVGGGTGSNLEYFAENLNHFAKVMVLDLCPSLAAQAQERVARHAGWSEFVKVIVADACDAEAPGLPSPGSVDLITFSYALSMIPDWEAALRNAKRLLKKGGHVCVCDFTVDN--------SQGWGMQTFWANVFASDHVYLRPERRPFLREEFVSVHEELGFGTFPYVPPVLQAPWYVFIGRK 262
+ G D+K+L H+ + V G++ +R+ESFY QA+ YD +R R+L GR + + + + GVW+D+GGGTGSNLE+ + + F KV V+DL SL ++R ++ GWS V+ +V DA LP G+ D++TFSY+L+MIPDW AA+ NA R+LK GG + V DF V WG ++FW FA+D+V+ P+ P+L++ F ++ + PY+ P+++ P+Y F+GRK
Sbjct: 2 SLGNDLKILYHL-VLRPVRGKTHSERMESFYAGQAEGYDDFRKRLLQGREDVYREV-VDRSAGGVWVDMGGGTGSNLEFAGDGIRRFEKVYVVDLAESLLGIVKKRSEKN-GWSN-VEAVVGDATQW----LPPEGAADVVTFSYSLTMIPDWFAAIDNALRMLKPGGLIGVIDFYVARKHPADSLAKHRWGTRSFWPVWFANDNVFPSPDHLPYLQKHFETLRLKESRAKVPYL-PLVRTPYYQFVGRK 242
BLAST of EWM28276.1 vs. NCBI_GenBank
Match: gi|575409369|gb|ETW95716.1| (SAM-dependent methlyltransferase [Candidatus Entotheonella sp. TSY1]) HSP 1 Score: 177.948 bits (450), Expect = 1.094e-51 Identity = 103/247 (41.70%), Postives = 145/247 (58.70%), Query Frame = 0
Query: 24 TDMKVLKHMWFAKIVPGQSQQDRLESFYKEQADLYDSYRFRMLHGRLPMVKAMPIPPKGEGVWLDVGGGTGSNLEYFAENLNHFAKVMVLDLCPSLAAQAQERVARHAGWSEFVKVIVADACDAEAPGLPSPGSVDLITFSYALSMIPDWEAALRNAKRLLKKGGHVCVCDFTVDNS--------QGWGMQTFWANVFASDHVYLRPERRPFLREEFVSVHEELGFGTFPYVPPVLQAPWYVFIGRK 262
+++K+L HM + I G S +RLESFY+ QA YD++R R+LHGR + A+P+P G +WLD+GGGTG NL Y ++ A + V+DL PSL A AQ+R+ HAGW V + AD +P VD++TFSY+L+MIPDW AA+ A +LL+ GG V V DF V W +TFW F +D+V+ P+ P+L + F + GT PY+P V P+Y++IG K
Sbjct: 7 SELKILYHMLLSPIR-GHSHAERLESFYQGQATGYDAFRSRLLHGRQDLWGALPVPEGG--IWLDMGGGTGWNLTYLGAAIDRLAHLYVVDLSPSLLAMAQQRI-EHAGWRN-VTPVEADVTQFTPEHMP----VDVVTFSYSLTMIPDWFAAIDQAWKLLRPGGTVGVVDFYVSRKYPATYAKRHRWLTRTFWPVWFNNDNVFPSPDHVPYLHDRFEADMFSERAGTMPYMPGV-SVPYYLYIGHK 243
BLAST of EWM28276.1 vs. NCBI_GenBank
Match: gi|488732040|ref|WP_002655451.1| (SAM-dependent methyltransferase [Blastopirellula marina] >gi|87290694|gb|EAQ82581.1| probable ubiquinone/menaquinone biosynthesis methyltransferase [Blastopirellula marina DSM 3645]) HSP 1 Score: 177.178 bits (448), Expect = 2.181e-51 Identity = 101/249 (40.56%), Postives = 144/249 (57.83%), Query Frame = 0
Query: 22 FGTDMKVLKHMWFAKIVPGQSQQDRLESFYKEQADLYDSYRFRMLHGRLPMVKAMPIPPKGEGVWLDVGGGTGSNLEYFAENLNHFAKVMVLDLCPSLAAQAQERVARHAGWSEFVKVIVADACDAEAPGLPSPGSVDLITFSYALSMIPDWEAALRNAKRLLKKGGHVCVCDFTVD--------NSQGWGMQTFWANVFASDHVYLRPERRPFLREEFVSVHEELGFGTFPYVPPVLQAPWYVFIGRK 262
+D+KVL H+ K V G++ +RLESFY QA+ YD +R R+L GR M ++ +P G VW+D+GGGTGSNLEY +++ V V+DL SL ER+ + GW K + ADA P G D++TFSY+L+MIPDW AA+ NA R+LK GG + V DF V GW + FW F+SD+V+ + P+L+ +F +V E PY+ P+++ P+Y F+GRK
Sbjct: 3 IASDLKVLYHL-AVKPVRGENHAERLESFYGGQAEAYDDFRKRLLQGRQEMYASLDLPEGG--VWVDMGGGTGSNLEYRGDDIPKMKSVYVVDLASSLLKVCDERI-QARGWETSAKTVEADATKF----TPEEGLADVVTFSYSLTMIPDWFAAMDNALRILKPGGLIGVVDFYVSRKYPHEGRTQHGWFNRNFWPVWFSSDNVHPSADHLPYLQRQFETVTLEERRAKVPYL-PLVRTPYYYFVGRK 242
BLAST of EWM28276.1 vs. NCBI_GenBank
Match: gi|494569406|ref|WP_007338907.1| (class I SAM-dependent methyltransferase [Rhodopirellula baltica] >gi|436438407|gb|ELP31957.1| protein containing Methyltransferase type 11 domain protein [Rhodopirellula baltica SWK14]) HSP 1 Score: 175.252 bits (443), Expect = 1.581e-50 Identity = 104/256 (40.62%), Postives = 147/256 (57.42%), Query Frame = 0
Query: 15 DYCPPSTFGTDMKVLKHMWFAKIVPGQSQQDRLESFYKEQADLYDSYRFRMLHGRLPMVKAMPIPPKGEGVWLDVGGGTGSNLEYFAENLNHFAKVMVLDLCPSLAAQAQERVARHAGWSEFVKVIVADACDAEAPGLPSPGSVDLITFSYALSMIPDWEAALRNAKRLLKKGGHVCVCDFTVDNS--------QGWGMQTFWANVFASDHVYLRPERRPFLREEFVSVHEELGFGTFPYVPPVLQAPWYVFIGRK 262
+ P++ D+KVL H+ F + V G + +RLESFY+ QA YDS+R R+LHGR ++ + P GVW+D G GTG NL E A+V ++DL PSL A ER+ V + ADA E P SVD++TFSY+L+MIPDW ++ A+R+LK GG + V DF V GW +TFW+ FASD+VYL + LR +F + E G+ PY+ P+++AP+Y+F+GRK
Sbjct: 3 EVIKPTSRFDDLKVLWHLLF-RPVRGNTHGERLESFYEGQASHYDSFRARLLHGRSELMSWVDFP--DNGVWVDFGAGTGHNLFSIEERSKSLAEVHLVDLSPSLLQIASERIEERQ--LSNVTLHHADATQFELPD----NSVDVVTFSYSLTMIPDWFESVLIARRILKPGGVIAVTDFHVSRKHAAAPSRQHGWLRRTFWSLWFASDNVYLSSDHLAMLRRQFKTERCEERLGSVPYM-PLVKAPYYLFLGRK 248
BLAST of EWM28276.1 vs. NCBI_GenBank
Match: gi|1094113836|ref|WP_071103335.1| (class I SAM-dependent methyltransferase [Moorea producens] >gi|1092221544|gb|AOY79886.1| SAM-dependent methyltransferase [Moorea producens JHB]) HSP 1 Score: 174.096 bits (440), Expect = 3.973e-50 Identity = 99/248 (39.92%), Postives = 147/248 (59.27%), Query Frame = 0
Query: 24 TDMKVLKHMWFAKIVPGQSQQDRLESFYKEQADLYDSYRFRMLHGRLPMVKAMPIPPKGEGVWLDVGGGTGSNLEYFAENLNHFAKVMVLDLCPSLAAQAQERVARHAGWSEFVKVIVADACDAEAPGLPSPGSVDLITFSYALSMIPDWEAALRNAKRLLKKGGHVCVCDFTVDNS---QGWGMQT-----FWANVFASDHVYLRPERRPFLREEFVSVHEELGFGTFPYVPPVLQAPWYVFIGRKE 263
+D+K + H+ AK + G S Q+RLE+FY+ Q+ YD +R R+L GR + +++ VW+D GGGTGSNLE A+ L+ F+K+ ++DL PSL A+ R+A GW+ V + AD LP G D++TFSY+L+MIP+W AA+ A+++LK GG + V DF V + Q W + FW FA+D+V+L P R +L +F +V G P++P L+ P+Y FIGRK
Sbjct: 9 SDLKTVYHL--AKPIRGDSHQERLENFYRTQSTDYDRFRRRLLKGREELYQSLADGDSNGSVWVDFGGGTGSNLESIADRLSKFSKIYIVDLSPSLLEVARGRIADR-GWTN-VTTVEADITQF----LPPEGVADIVTFSYSLTMIPEWFAAIEQAEQILKPGGIIGVVDFYVSHKHPPQDWQRHSFLARHFWPIWFATDNVFLCPNRLGYLHHKFDTVSLTEKMGNLPFLPG-LKVPYYRFIGRKR 247
BLAST of EWM28276.1 vs. NCBI_GenBank
Match: gi|502877268|ref|WP_013112244.1| (SAM-dependent methyltransferase [Planctopirus limnophila] >gi|296016574|gb|ADG69813.1| Methyltransferase type 11 [Planctopirus limnophila DSM 3776]) HSP 1 Score: 173.326 bits (438), Expect = 6.859e-50 Identity = 101/245 (41.22%), Postives = 140/245 (57.14%), Query Frame = 0
Query: 26 MKVLKHMWFAKIVPGQSQQDRLESFYKEQADLYDSYRFRMLHGRLPMVKAMPIPPKGEGVWLDVGGGTGSNLEYFAENLNHFAKVMVLDLCPSLAAQAQERVARHAGWSEFVKVIVADACDAEAPGLPSPGSVDLITFSYALSMIPDWEAALRNAKRLLKKGGHVCVCDFTVDNS--------QGWGMQTFWANVFASDHVYLRPERRPFLREEFVSVHEELGFGTFPYVPPVLQAPWYVFIGRK 262
MK+L HM + GQ+ ++RLE FYK QA YDS+R R+LHG+ + +P PP GVW+D+G GTG N E + E L F+ V ++DL SL AQ R+ + GW VK I DA LP G+ D++TFSY+L+MIPDW A+ A R+LK GG + + DF V W + FW FA+D+V+L + P+L+ +V G PY+P V +AP YV++GRK
Sbjct: 1 MKILWHM-IVRQGRGQTHEERLEDFYKGQASGYDSFRKRLLHGKKDLFDQLPAPPG--GVWVDLGAGTGENAENWGERLQEFSNVYLVDLSSSLLKVAQARIEQR-GWQN-VKAIHHDATTF----LPPEGTADVVTFSYSLTMIPDWHKAVDQAIRMLKPGGVLGIVDFYVSRKYPPEGNVRHAWSTRHFWQIWFATDNVFLSGDHLPYLQSHLETVVLSERRGKVPYMPFV-RAPHYVYVGRK 235 The following BLAST results are available for this feature:
BLAST of EWM28276.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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