EWM28186.1, cds2419 (CDS) Nannochloropsis gaditana

Overview
NameEWM28186.1
Unique Namecds2419
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:360219..360227 +
Alignment locationCM002459.1:360282..360551 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM28186.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100004g61.9117.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:360219..360227 +
CM002459.1supercontigCM002459.1:360282..360551 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM28186.1 vs. NCBI_GenBank
Match: gi|585110531|gb|EWM28186.1| (hypothetical protein Naga_100004g61 [Nannochloropsis gaditana])

HSP 1 Score: 191.815 bits (486), Expect = 4.978e-62
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0 
Query:    1 MGMNSGVYRFLSKSFPLFVPLARTCDMGPSGKNYRGLTTSSVSRENHISSYRMARLDARMNLQSLFKGENYVCDYHEEGEINRRKRSRNRHE 92
            MGMNSGVYRFLSKSFPLFVPLARTCDMGPSGKNYRGLTTSSVSRENHISSYRMARLDARMNLQSLFKGENYVCDYHEEGEINRRKRSRNRHE
Sbjct:    1 MGMNSGVYRFLSKSFPLFVPLARTCDMGPSGKNYRGLTTSSVSRENHISSYRMARLDARMNLQSLFKGENYVCDYHEEGEINRRKRSRNRHE 92
The following BLAST results are available for this feature:
BLAST of EWM28186.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585110531|gb|EWM28186.1|4.978e-62100.00hypothetical protein Naga_100004g61 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2427rna2427Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications