EWM28262.1, cds2416 (CDS) Nannochloropsis gaditana

Overview
NameEWM28262.1
Unique Namecds2416
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:353644..354645 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM28262.1
ProductBrix domain protein
Orig transcript idgnl|cribi|Naga_100004g57.9193.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:353644..354645 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005730nucleolus
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
Vocabulary: INTERPRO
TermDefinition
IPR004154Anticodon-bd
IPR007109Brix
Homology
BLAST of EWM28262.1 vs. NCBI_GenBank
Match: gi|585110607|gb|EWM28262.1| (Brix domain protein [Nannochloropsis gaditana])

HSP 1 Score: 692.96 bits (1787), Expect = 0.000e+0
Identity = 333/333 (100.00%), Postives = 333/333 (100.00%), Query Frame = 0
Query:    1 MHCPWLRRTATKQIYLTLHRTRSHSGAKQLSPPLCEFFLQVLMSTIRRQTRLRKEYLYRKSLEGKEKAAYERKQQIRNALQEGKPIPTELRGEEGNWRHEINLEDDITARPHNHIDDEYGLAGTRDPKVCVTTSRDPSSRLKQFMKEVKLIFPNAQAVNRGNTKVPELVEACRTHDFTDIVVVQETRGQPDGLLVCHLPLGPTAYFTISNVVMRHDIEDRAAVSEAYPHLILEGFVSTLGRRVADILKFTFPAPRPASQRVVTFANEDDHIVFRHHTFEKAPGTKGEVTLKEIGPRFDLTVFQVKLGTLEQTDAETEFVFRPYMNTAKKRRLL 333
            MHCPWLRRTATKQIYLTLHRTRSHSGAKQLSPPLCEFFLQVLMSTIRRQTRLRKEYLYRKSLEGKEKAAYERKQQIRNALQEGKPIPTELRGEEGNWRHEINLEDDITARPHNHIDDEYGLAGTRDPKVCVTTSRDPSSRLKQFMKEVKLIFPNAQAVNRGNTKVPELVEACRTHDFTDIVVVQETRGQPDGLLVCHLPLGPTAYFTISNVVMRHDIEDRAAVSEAYPHLILEGFVSTLGRRVADILKFTFPAPRPASQRVVTFANEDDHIVFRHHTFEKAPGTKGEVTLKEIGPRFDLTVFQVKLGTLEQTDAETEFVFRPYMNTAKKRRLL
Sbjct:    1 MHCPWLRRTATKQIYLTLHRTRSHSGAKQLSPPLCEFFLQVLMSTIRRQTRLRKEYLYRKSLEGKEKAAYERKQQIRNALQEGKPIPTELRGEEGNWRHEINLEDDITARPHNHIDDEYGLAGTRDPKVCVTTSRDPSSRLKQFMKEVKLIFPNAQAVNRGNTKVPELVEACRTHDFTDIVVVQETRGQPDGLLVCHLPLGPTAYFTISNVVMRHDIEDRAAVSEAYPHLILEGFVSTLGRRVADILKFTFPAPRPASQRVVTFANEDDHIVFRHHTFEKAPGTKGEVTLKEIGPRFDLTVFQVKLGTLEQTDAETEFVFRPYMNTAKKRRLL 333          
BLAST of EWM28262.1 vs. NCBI_GenBank
Match: gi|971510571|dbj|GAQ87625.1| (IMP4 [Klebsormidium nitens])

HSP 1 Score: 402.905 bits (1034), Expect = 2.684e-138
Identity = 189/291 (64.95%), Postives = 233/291 (80.07%), Query Frame = 0
Query:   46 IRRQTRLRKEYLYRKSLEGKEKAAYERKQQIRNALQEGKPIPTELRGEEGNWRHEINLEDDITARPHNHIDDEYGLAGTRDPKVCVTTSRDPSSRLKQFMKEVKLIFPNAQAVNRGNTKVPELVEACRTHDFTDIVVVQETRGQPDGLLVCHLPLGPTAYFTISNVVMRHDIEDRAAV---SEAYPHLILEGFVSTLGRRVADILKFTFPAPRPASQRVVTFANEDDHIVFRHHTFEKAPGTKGEVTLKEIGPRFDLTVFQVKLGTLEQTDAETEFVFRPYMNTAKKRRLL 333
            +RR  RLR+EYLYRKSLEGKE+A YERK++IR AL EGKPIPTELR EE   R EI LEDD+TA    HIDDEY  AG RDPK+ +TTSRDPSSRL QF+KE+K++FPNAQ +NRG   + ++VEACR++DFTDIV+V E RG+PDGL+VCHLP GPTAYF +SNVV RHDI+DRAAV   SEA+PHLIL  F + LG R  +ILKF FP P+  S+R++TFAN+ D+I FRHH +EK  G K  V LKE+GPRF+L ++QVKLGT++Q++AE E+V RPYMN+A+KR  L
Sbjct:    2 LRRNARLRREYLYRKSLEGKERAVYERKRKIREALAEGKPIPTELRNEEAALRQEIELEDDVTAEQRTHIDDEYARAGERDPKILLTTSRDPSSRLTQFVKELKIVFPNAQRINRGGQVISQIVEACRSNDFTDIVMVHEHRGEPDGLVVCHLPFGPTAYFGLSNVVTRHDIKDRAAVGTMSEAFPHLILNNFNTKLGLRTQNILKFLFPVPKDESKRIITFANQSDYISFRHHIYEKPKGAKS-VELKEVGPRFELRLYQVKLGTMDQSEAEDEWVIRPYMNSARKRTAL 291          
BLAST of EWM28262.1 vs. NCBI_GenBank
Match: gi|586669132|ref|XP_006836257.1| (U3 small nucleolar ribonucleoprotein protein IMP4 [Amborella trichopoda] >gi|548838757|gb|ERM99110.1| hypothetical protein AMTR_s00101p00134540 [Amborella trichopoda])

HSP 1 Score: 390.193 bits (1001), Expect = 2.399e-133
Identity = 182/291 (62.54%), Postives = 230/291 (79.04%), Query Frame = 0
Query:   46 IRRQTRLRKEYLYRKSLEGKEKAAYERKQQIRNALQEGKPIPTELRGEEGNWRHEINLEDDITARPHNHIDDEYGLAGTRDPKVCVTTSRDPSSRLKQFMKEVKLIFPNAQAVNRGNTKVPELVEACRTHDFTDIVVVQETRGQPDGLLVCHLPLGPTAYFTISNVVMRHDIEDRAAV---SEAYPHLILEGFVSTLGRRVADILKFTFPAPRPASQRVVTFANEDDHIVFRHHTFEKAPGTKGEVTLKEIGPRFDLTVFQVKLGTLEQTDAETEFVFRPYMNTAKKRRLL 333
            +RR  RLR+EYLYRK+LEGKE+  YE+K++IR AL+EGKPIPTELR EE   RHEI+LEDD TA    H+DDEY  A   DPK+ +TTSRDPSSRL QF+KE+K +FPNAQ +NRGN  + E+VE CRTHDFTDIV+V E RG+PDGL+VCHLP GPTAYF + NVV RHDI+D+  +   SEAYPHLIL  F S LG R A+ILK  FP P+P S+R++TFAN+ D+I FRHH ++K  G K  + LKE+GPRF+L ++Q+KLGT++Q++A+ E+V RPYMNTAKK++ L
Sbjct:    2 LRRNIRLRREYLYRKNLEGKERLLYEKKRKIRKALEEGKPIPTELRKEEFALRHEIDLEDDQTAVQKTHVDDEYANASEMDPKILLTTSRDPSSRLSQFVKELKFVFPNAQRMNRGNQVISEIVETCRTHDFTDIVMVHEHRGEPDGLIVCHLPFGPTAYFGLLNVVTRHDIKDKKVIGTMSEAYPHLILHNFSSKLGERTANILKHLFPVPKPDSKRIITFANQSDYISFRHHVYQKDGGPKS-IELKEVGPRFELRLYQIKLGTVDQSEAQNEWVIRPYMNTAKKQKAL 291          
BLAST of EWM28262.1 vs. NCBI_GenBank
Match: gi|302818007|ref|XP_002990678.1| (hypothetical protein SELMODRAFT_185462 [Selaginella moellendorffii] >gi|300141600|gb|EFJ08310.1| hypothetical protein SELMODRAFT_185462 [Selaginella moellendorffii])

HSP 1 Score: 389.037 bits (998), Expect = 6.318e-133
Identity = 176/291 (60.48%), Postives = 231/291 (79.38%), Query Frame = 0
Query:   46 IRRQTRLRKEYLYRKSLEGKEKAAYERKQQIRNALQEGKPIPTELRGEEGNWRHEINLEDDITARPHNHIDDEYGLAGTRDPKVCVTTSRDPSSRLKQFMKEVKLIFPNAQAVNRGNTKVPELVEACRTHDFTDIVVVQETRGQPDGLLVCHLPLGPTAYFTISNVVMRHDIEDR---AAVSEAYPHLILEGFVSTLGRRVADILKFTFPAPRPASQRVVTFANEDDHIVFRHHTFEKAPGTKGEVTLKEIGPRFDLTVFQVKLGTLEQTDAETEFVFRPYMNTAKKRRLL 333
            IRR  RLR+EYLYRKSLEGKE+  YE+K++I+ ALQEGKP+PTELR +E + R EI+LED+ TA P  H+DDEY  AG  DPK+ +TTSRDPSSRL QF+KE+K++FPNAQ +NRG   + E+VE+CR HDFTDI++V E RG+PDGL+VCHLP GPTAYF + NVV RHDI+D+     +SEAYPHLIL  F + LG R ++ILK+ FP P+P S+R++TFAN+ D+I FRHH +EK  G K  + LKE+GPRF+L ++Q+KLGT++Q +A+ E+V RPYMN+++KR  L
Sbjct:    2 IRRNARLRREYLYRKSLEGKEREVYEKKRKIKQALQEGKPLPTELRNDEASLRQEIDLEDENTAEPTTHVDDEYAYAGEVDPKILLTTSRDPSSRLTQFVKELKIVFPNAQRMNRGGQVIAEIVESCRAHDFTDIIMVHEHRGEPDGLIVCHLPYGPTAYFGLMNVVTRHDIKDKKGLGTMSEAYPHLILNNFNTKLGMRTSNILKYLFPVPKPDSKRLITFANQQDYISFRHHVYEKQGGVKS-IELKEVGPRFELRLYQIKLGTVDQVEAQNEWVIRPYMNSSRKRAAL 291          
BLAST of EWM28262.1 vs. NCBI_GenBank
Match: gi|695055207|ref|XP_009415771.1| (PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4 [Musa acuminata subsp. malaccensis])

HSP 1 Score: 387.497 bits (994), Expect = 2.688e-132
Identity = 179/291 (61.51%), Postives = 232/291 (79.73%), Query Frame = 0
Query:   46 IRRQTRLRKEYLYRKSLEGKEKAAYERKQQIRNALQEGKPIPTELRGEEGNWRHEINLEDDITARPHNHIDDEYGLAGTRDPKVCVTTSRDPSSRLKQFMKEVKLIFPNAQAVNRGNTKVPELVEACRTHDFTDIVVVQETRGQPDGLLVCHLPLGPTAYFTISNVVMRHDIEDRAAV---SEAYPHLILEGFVSTLGRRVADILKFTFPAPRPASQRVVTFANEDDHIVFRHHTFEKAPGTKGEVTLKEIGPRFDLTVFQVKLGTLEQTDAETEFVFRPYMNTAKKRRLL 333
            +RR TRLR+EYLYRKSLEGKE+  YE+K++IR AL+EGKPIPTELR EE   R EI+LED+ TA P  HIDDEY  A  +DP++ +TTSR+PS  L QF+KE+K++FPN+  +NRG   + E++E+CR H+FTD+V+V E RGQPDGL+VCHLP GPTAYF + NVV RHDI+D+ AV   SEAYPHLIL+ F S LG+R A+ILK  FP P+P S+R++TFAN+ D+I FRHH +EK  G K  V LKE+GPRF+L ++Q+KLGT++Q++A+ E+V RPYMNTAKKR +L
Sbjct:    2 LRRNTRLRREYLYRKSLEGKEREYYEKKRKIREALEEGKPIPTELRNEEAALRQEIDLEDEYTAVPRTHIDDEYATASEKDPRILLTTSRNPSQPLTQFVKELKIVFPNSTRMNRGGQVISEIIESCRAHEFTDVVLVHEHRGQPDGLIVCHLPFGPTAYFGLLNVVTRHDIKDKKAVGTMSEAYPHLILDNFTSKLGQRTANILKHLFPEPKPDSKRIITFANQSDYISFRHHVYEKRGGPKS-VELKEVGPRFELRLYQIKLGTVDQSEAQNEWVIRPYMNTAKKRNVL 291          
BLAST of EWM28262.1 vs. NCBI_GenBank
Match: gi|1026765704|gb|OAE26357.1| (hypothetical protein AXG93_4324s1240 [Marchantia polymorpha subsp. ruderalis])

HSP 1 Score: 386.726 bits (992), Expect = 5.566e-132
Identity = 178/291 (61.17%), Postives = 230/291 (79.04%), Query Frame = 0
Query:   46 IRRQTRLRKEYLYRKSLEGKEKAAYERKQQIRNALQEGKPIPTELRGEEGNWRHEINLEDDITARPHNHIDDEYGLAGTRDPKVCVTTSRDPSSRLKQFMKEVKLIFPNAQAVNRGNTKVPELVEACRTHDFTDIVVVQETRGQPDGLLVCHLPLGPTAYFTISNVVMRHDIEDR---AAVSEAYPHLILEGFVSTLGRRVADILKFTFPAPRPASQRVVTFANEDDHIVFRHHTFEKAPGTKGEVTLKEIGPRFDLTVFQVKLGTLEQTDAETEFVFRPYMNTAKKRRLL 333
            IRR TRLR+EYLYRKSLEGKE+  YE+K++IR AL+EGKPIPTELR EE   R EI+LEDD TA    HIDDEY  A  +DPK+ +TTSRDPSSRL QF+KE+K++FPNAQ +NRG   + E+VE+CR+HDFTDI++V E RG+PDGL+VCHLP GPTAYF + NVV RHDI+D+     +SEAYPHLILE F + LG+R A+ILK+ FP P+  ++R++T AN  D+I FRHH +EK  G K  + LKE+GPRF+L ++Q+KLGT++Q +A+ E+V RPYMN+++KR  L
Sbjct:    2 IRRTTRLRREYLYRKSLEGKERTLYEKKRKIRLALEEGKPIPTELRNEEAALREEIDLEDDNTAELRTHIDDEYAHADEKDPKILLTTSRDPSSRLTQFVKELKIVFPNAQRINRGGQVISEIVESCRSHDFTDIIMVHEHRGEPDGLIVCHLPFGPTAYFGLLNVVTRHDIKDKQTLGTMSEAYPHLILENFSTKLGQRTANILKYLFPEPKADTKRIITMANSADYISFRHHVYEKPAGVKS-IELKEVGPRFELRLYQIKLGTMDQAEAQNEWVIRPYMNSSRKRTAL 291          
BLAST of EWM28262.1 vs. NCBI_GenBank
Match: gi|1173945963|gb|OQR94539.1| (U3 small nucleolar ribonucleoprotein IMP4 [Achlya hypogyna])

HSP 1 Score: 384.03 bits (985), Expect = 5.420e-131
Identity = 176/289 (60.90%), Postives = 231/289 (79.93%), Query Frame = 0
Query:   45 TIRRQTRLRKEYLYRKSLEGKEKAAYERKQQIRNALQEGKPIPTELRGEEGNWRHEINLEDDITARPHNHIDDEYGLAGTRDPKVCVTTSRDPSSRLKQFMKEVKLIFPNAQAVNRGNTKVPELVEACRTHDFTDIVVVQETRGQPDGLLVCHLPLGPTAYFTISNVVMRHDIEDRAAVSEAYPHLILEGFVSTLGRRVADILKFTFPAPRPASQRVVTFANEDDHIVFRHHTFEKAPGTKGEVTLKEIGPRFDLTVFQVKLGTLEQTDAETEFVFRPYMNTAKKRRLL 333
            ++RR  R+R+EYLYRK LEG+E+A YERK Q++ A++ GK IPTELRG E + R E+  +DD    P +HIDDEY  AG  DPK+ +TTSRDPS+RLK+F +EV+LIFPNA  +NRG   + +LV++ R ++FTD+V++ ETRG+PDGL+VCHLP GPTAYF++ NVVMRHDIEDRA VSEAYPH+IL+ F ST+G+RV +ILK+ FP P+P S+RV+TF+N DD I FRHH F+K   T  EV L+E GPRF+L ++Q+KLGT+EQ +AE E+V RPYMNTAKKRR++
Sbjct:    2 SVRRNVRMRREYLYRKGLEGQERAQYERKVQLKQAIESGKAIPTELRGVESSLRKELEYDDDKHIVPKSHIDDEYQNAGMFDPKIAITTSRDPSARLKKFAQEVRLIFPNAVRLNRGAHTIGDLVDSARANEFTDLVMITETRGEPDGLVVCHLPYGPTAYFSLQNVVMRHDIEDRATVSEAYPHIILDKFQSTMGQRVGNILKYLFPVPKPDSKRVITFSNTDDFISFRHHVFKK---TGREVELQECGPRFELQLYQIKLGTMEQKEAENEWVLRPYMNTAKKRRVI 287          
BLAST of EWM28262.1 vs. NCBI_GenBank
Match: gi|1072232994|gb|OEU17725.1| (Brix-domain-containing protein [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 382.874 bits (982), Expect = 2.174e-130
Identity = 177/291 (60.82%), Postives = 231/291 (79.38%), Query Frame = 0
Query:   44 STIRRQTRLRKEYLYRKSLEGKEKAAYERKQQIRNALQEGKPIPTELRGEEGNWRHEINLEDDITARPHNHIDDEYGLAGTRDPKVCVTTSRDPSSRLKQFMKEVKLIFPNAQAVNRGNTKVPELVEACRTHDFTDIVVVQETRGQPDGLLVCHLPLGPTAYFTISNVVMRHDIEDRAA-VSEAYPHLILEGFVSTLGRRVADILKFTFPAPRPASQRVVTFANEDDHIVFRHHTFEKAPGTKGEVTLKEIGPRFDLTVFQVKLGTLEQTDAETEFVFRPYMNTAKKRRLL 333
            ++ RRQTRLR+EYLYRKSLEG+EKAAYE+K+ IR AL  GKP+PTE+R        E++ ED  T  P +HID+EYG AG  +P++CVTTSRDPSSRLKQF KE+KL+ PN+  +NRGN +V E++E+CR  +FTD++VVQETRG+PDGL++CHLPLGPTAYF+I+N VMRHD++  AA +SEAYPH+IL  F S LG+RV +ILK  FP PRP ++R+VTF+N++D I FRHH + K       VTL E+GPRF+L ++Q++LGTLEQ +AE E+V RPY NTAKKR++L
Sbjct:    8 ASKRRQTRLRREYLYRKSLEGREKAAYEQKRVIREALASGKPLPTEVRASYDKMIKEVDAEDITTETPKSHIDNEYGDAGLLEPRICVTTSRDPSSRLKQFSKEMKLLIPNSTRMNRGNNRVDEMIESCRQSEFTDVIVVQETRGEPDGLVICHLPLGPTAYFSINNTVMRHDLDPPAAPMSEAYPHIILNNFNSELGKRVGNILKCLFPVPRPDTKRIVTFSNDNDFISFRHHMYSKP--AHDSVTLHEVGPRFELRLYQIRLGTLEQKEAENEYVLRPYQNTAKKRKML 296          
BLAST of EWM28262.1 vs. NCBI_GenBank
Match: gi|502127749|ref|XP_004499820.1| (PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4 [Cicer arietinum])

HSP 1 Score: 382.489 bits (981), Expect = 3.194e-130
Identity = 175/291 (60.14%), Postives = 229/291 (78.69%), Query Frame = 0
Query:   46 IRRQTRLRKEYLYRKSLEGKEKAAYERKQQIRNALQEGKPIPTELRGEEGNWRHEINLEDDITARPHNHIDDEYGLAGTRDPKVCVTTSRDPSSRLKQFMKEVKLIFPNAQAVNRGNTKVPELVEACRTHDFTDIVVVQETRGQPDGLLVCHLPLGPTAYFTISNVVMRHDIEDRAAVS---EAYPHLILEGFVSTLGRRVADILKFTFPAPRPASQRVVTFANEDDHIVFRHHTFEKAPGTKGEVTLKEIGPRFDLTVFQVKLGTLEQTDAETEFVFRPYMNTAKKRRLL 333
            +RR  RLR+EYLYRKSLEGKE+  YE+K++IR ALQEGKPIPTELR EE   R EI+LED+ TA P  HIDDEY  A  +DPK+ +TTSRDPS+ L+QF+KE+ ++FPNAQ +NRG   + E++E+CR+HD+TD+++V E RG PDGL+VCHLP GPTAYF + NVV RH+I D+ A+    EAYPHLIL+ F + LG R A+ILK+ FP P+P ++R+VTFAN+ D+I FRHH +EK  G K  V LKEIGPRF+L ++Q+KLGT++Q +A+ E+V RPYMNT +KR+ L
Sbjct:    2 LRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALQEGKPIPTELRNEEAALRREIDLEDENTAVPRTHIDDEYAFAAEKDPKILLTTSRDPSAPLQQFVKELSIVFPNAQRMNRGGQVISEIIESCRSHDYTDVILVHEHRGVPDGLIVCHLPYGPTAYFGLLNVVTRHEIRDKKAIGTMPEAYPHLILDNFSTKLGERTANILKYLFPVPKPDTKRIVTFANKSDYISFRHHIYEKQGGPKS-VELKEIGPRFELRLYQIKLGTVDQAEAQLEWVIRPYMNTTRKRKFL 291          
BLAST of EWM28262.1 vs. NCBI_GenBank
Match: gi|672130031|ref|XP_008788540.1| (PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4 [Phoenix dactylifera])

HSP 1 Score: 382.104 bits (980), Expect = 3.602e-130
Identity = 173/291 (59.45%), Postives = 231/291 (79.38%), Query Frame = 0
Query:   46 IRRQTRLRKEYLYRKSLEGKEKAAYERKQQIRNALQEGKPIPTELRGEEGNWRHEINLEDDITARPHNHIDDEYGLAGTRDPKVCVTTSRDPSSRLKQFMKEVKLIFPNAQAVNRGNTKVPELVEACRTHDFTDIVVVQETRGQPDGLLVCHLPLGPTAYFTISNVVMRHDIEDRAAV---SEAYPHLILEGFVSTLGRRVADILKFTFPAPRPASQRVVTFANEDDHIVFRHHTFEKAPGTKGEVTLKEIGPRFDLTVFQVKLGTLEQTDAETEFVFRPYMNTAKKRRLL 333
            +RR TRLR+EYLYRKSLEGKE+  YE+K++IR AL+EGKPIPTELR EE   R EI+LED+ TA P  HIDDEY  A  +DPK+ +TTSR+PS+ L QF+KE+K +FPN+  +NRG   + E++E+CR H+FTD+++V E RG+PDGL+VCHLP GPTAYF + NVV RHDI+D+ A+   SEAYPHLIL+ F + LG+R A++LK  FP P+P S+R++TFAN  D+I FRHH +EK  G K  + LKE+GPRF+L ++Q+KLGT++Q++A+ E+V RP+MNTAKKR +L
Sbjct:    2 LRRNTRLRREYLYRKSLEGKEREYYEKKRKIREALEEGKPIPTELRNEEAALRQEIDLEDEYTAVPRTHIDDEYASASAKDPKILLTTSRNPSAPLTQFVKELKFVFPNSTRMNRGGQVISEIIESCRAHEFTDVILVHEHRGEPDGLIVCHLPFGPTAYFGLLNVVTRHDIKDKKAIGTMSEAYPHLILDNFSTKLGQRTANVLKHLFPVPKPNSKRIITFANRSDYISFRHHVYEKHGGPKS-IELKEVGPRFELRLYQIKLGTVDQSEAQNEWVIRPFMNTAKKRNVL 291          
The following BLAST results are available for this feature:
BLAST of EWM28262.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585110607|gb|EWM28262.1|0.000e+0100.00Brix domain protein [Nannochloropsis gaditana][more]
gi|971510571|dbj|GAQ87625.1|2.684e-13864.95IMP4 [Klebsormidium nitens][more]
gi|586669132|ref|XP_006836257.1|2.399e-13362.54U3 small nucleolar ribonucleoprotein protein IMP4 ... [more]
gi|302818007|ref|XP_002990678.1|6.318e-13360.48hypothetical protein SELMODRAFT_185462 [Selaginell... [more]
gi|695055207|ref|XP_009415771.1|2.688e-13261.51PREDICTED: U3 small nucleolar ribonucleoprotein pr... [more]
gi|1026765704|gb|OAE26357.1|5.566e-13261.17hypothetical protein AXG93_4324s1240 [Marchantia p... [more]
gi|1173945963|gb|OQR94539.1|5.420e-13160.90U3 small nucleolar ribonucleoprotein IMP4 [Achlya ... [more]
gi|1072232994|gb|OEU17725.1|2.174e-13060.82Brix-domain-containing protein [Fragilariopsis cyl... [more]
gi|502127749|ref|XP_004499820.1|3.194e-13060.14PREDICTED: U3 small nucleolar ribonucleoprotein pr... [more]
gi|672130031|ref|XP_008788540.1|3.602e-13059.45PREDICTED: U3 small nucleolar ribonucleoprotein pr... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2424rna2424Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications