EWM28229.1, cds2412 (CDS) Nannochloropsis gaditana

Overview
NameEWM28229.1
Unique Namecds2412
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:344038..344463 +
Alignment locationCM002459.1:344582..345329 +
Alignment locationCM002459.1:345436..345674 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM28229.1
Producttransmembrane protein
Orig transcript idgnl|cribi|Naga_100004g53.9160.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:344038..344463 +
CM002459.1supercontigCM002459.1:344582..345329 +
CM002459.1supercontigCM002459.1:345436..345674 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR005178Ostalpha/TMEM184C
Homology
BLAST of EWM28229.1 vs. NCBI_GenBank
Match: gi|585110574|gb|EWM28229.1| (transmembrane protein [Nannochloropsis gaditana])

HSP 1 Score: 982.63 bits (2539), Expect = 0.000e+0
Identity = 470/470 (100.00%), Postives = 470/470 (100.00%), Query Frame = 0
Query:    1 MIEAYQGAFMEEDGTTEDSTAGLRSNAAGPTFGNSRSNSTTKHGLTCNIICENEEEEEGDEQLPPRRTDLPFHSSHDEYVVKCSRRLLYVFYGCGTIFAAIILWQIISQHKQRHVIAWSVGAIFVGIAVPFSLHDIHMHTMHYVNPKLQKYYIRILWMVPIYAIESWLALRFRGQKLFLETAREAYEAYVIYNFYMLLLHYLGGGQGVRDILKAKSDAGDKTVRLLFPFCCFRWKRSGQFINRCTVGVIQYVIIRFFLAFITCLVEYMLDHGLGQREALEQTVFAILIIINVSQVWAVYCLVAFYHEFHYELRAINPFWKFVVVKMVVFLSFWQGLLFSGMAREGMLRPYMDYSKQDIASGIQNLLICIEMAAISVAHKYVFSYKDMEIIVEPNKMKPHPSWAAWIDILPWDVISDFREQVFNGFGLRRKMQKKNRSPKSGVGAVTSEVSTLTVMNTHVVENRSTLAAVV 470
            MIEAYQGAFMEEDGTTEDSTAGLRSNAAGPTFGNSRSNSTTKHGLTCNIICENEEEEEGDEQLPPRRTDLPFHSSHDEYVVKCSRRLLYVFYGCGTIFAAIILWQIISQHKQRHVIAWSVGAIFVGIAVPFSLHDIHMHTMHYVNPKLQKYYIRILWMVPIYAIESWLALRFRGQKLFLETAREAYEAYVIYNFYMLLLHYLGGGQGVRDILKAKSDAGDKTVRLLFPFCCFRWKRSGQFINRCTVGVIQYVIIRFFLAFITCLVEYMLDHGLGQREALEQTVFAILIIINVSQVWAVYCLVAFYHEFHYELRAINPFWKFVVVKMVVFLSFWQGLLFSGMAREGMLRPYMDYSKQDIASGIQNLLICIEMAAISVAHKYVFSYKDMEIIVEPNKMKPHPSWAAWIDILPWDVISDFREQVFNGFGLRRKMQKKNRSPKSGVGAVTSEVSTLTVMNTHVVENRSTLAAVV
Sbjct:    1 MIEAYQGAFMEEDGTTEDSTAGLRSNAAGPTFGNSRSNSTTKHGLTCNIICENEEEEEGDEQLPPRRTDLPFHSSHDEYVVKCSRRLLYVFYGCGTIFAAIILWQIISQHKQRHVIAWSVGAIFVGIAVPFSLHDIHMHTMHYVNPKLQKYYIRILWMVPIYAIESWLALRFRGQKLFLETAREAYEAYVIYNFYMLLLHYLGGGQGVRDILKAKSDAGDKTVRLLFPFCCFRWKRSGQFINRCTVGVIQYVIIRFFLAFITCLVEYMLDHGLGQREALEQTVFAILIIINVSQVWAVYCLVAFYHEFHYELRAINPFWKFVVVKMVVFLSFWQGLLFSGMAREGMLRPYMDYSKQDIASGIQNLLICIEMAAISVAHKYVFSYKDMEIIVEPNKMKPHPSWAAWIDILPWDVISDFREQVFNGFGLRRKMQKKNRSPKSGVGAVTSEVSTLTVMNTHVVENRSTLAAVV 470          
BLAST of EWM28229.1 vs. NCBI_GenBank
Match: gi|551663945|ref|XP_005834736.1| (hypothetical protein GUITHDRAFT_69286 [Guillardia theta CCMP2712] >gi|428178883|gb|EKX47756.1| hypothetical protein GUITHDRAFT_69286 [Guillardia theta CCMP2712])

HSP 1 Score: 232.646 bits (592), Expect = 5.536e-70
Identity = 119/238 (50.00%), Postives = 162/238 (68.07%), Query Frame = 0
Query:   98 FAAIILWQIISQHKQRHVIAWSVGAIFVGIAVPFSLHDIHMHTMHYVNPKLQKYYIRILWMVPIYAIESWLALRFRGQKLFLETAREAYEAYVIYNFYMLLLHYLGGGQGVRDILKAKSDAGDKTVRLLFPFCCFR-WKRSGQFINRCTVGVIQYVIIRFFLAFITCLVEYMLDHGLGQREALEQTVFAILIIINVSQVWAVYCLVAFYHEFHYELRAINPFWKFVVVKMVVFLSFWQ 334
             A I+LWQ I    ++HVIAW +GAIFV  AVP +L DIH H +HYV+P LQ++Y+RILWM+PIYA+ESWLALRF  QK++LET REAYE+YV+Y+F+ L+  +L  G+  R ++  K   G     +L+P CC   W+   QF+ RC++GV QYV IR   A + C++E+   +G G  + L +     LI++N SQ WA+YCL+ FY E   EL AI P  KF+VVK VVF+S+WQ
Sbjct:   12 LAGIVLWQFIVHEYEQHVIAWVIGAIFVMAAVPLALQDIHFHIIHYVSP-LQRHYVRILWMIPIYAVESWLALRFNEQKIYLETMREAYESYVVYSFFKLMREFL--GEKPRKVVAEKKGRGKAI--MLWPCCCMTAWRLDAQFLTRCSLGVWQYVFIRTVSAVVACILEHFHLYGEGTYD-LNKFYIYYLILVNTSQCWALYCLILFYKELAEELSAIGPLPKFLVVKAVVFVSWWQ 243          
BLAST of EWM28229.1 vs. NCBI_GenBank
Match: gi|1176098339|ref|XP_020619831.1| (transmembrane protein 184C-like isoform X2 [Orbicella faveolata])

HSP 1 Score: 226.098 bits (575), Expect = 1.102e-65
Identity = 119/289 (41.18%), Postives = 171/289 (59.17%), Query Frame = 0
Query:  101 IILWQIISQHKQRHVIAWSVGAIFVGIAVPFSLHDIHMHTMHYVNPKLQKYYIRILWMVPIYAIESWLALRFRGQKLFLETAREAYEAYVIYNFYMLLLHYLGGGQGVRDILKAKSDAGDKTVRLLFPFCCF-RWKRSGQFINRCTVGVIQYVIIRFFLAFITCLVEYMLDHGLGQREALEQTVFAILIIINVSQVWAVYCLVAFYHEFHYELRAINPFWKFVVVKMVVFLSFWQGLLFSGMAREGML---RPYMDYSKQDIASGIQNLLICIEMAAISVAHKYVFSYK 385
            + +W++     Q HV AW     FV + +P SL  I  H ++Y  P+LQ+  +RILWMVPIYA +SWLALRF    ++L++ RE YEAYVIYNF   LL YL        +L     +G   V+  FP C    W+     I+RC  GV+ Y ++R    FI    E    +  G   + +     I++I N SQVWA+YCLV FY   + EL+ +NPF KF+ +K+VVF SFWQG+L + + + G++     ++ Y+ +D+A+GIQN L+CIEM   ++AH YVFS+K
Sbjct:   40 LTVWELHKNRAQTHVQAWFTAGCFVFLTIPISLWGILQHLVNYTKPELQRRIVRILWMVPIYATDSWLALRFPKAAIYLDSLRECYEAYVIYNFMTFLLAYLTVEYDFEVVL-----SGKHQVQHFFPCCSLPPWRMGKTIIDRCKQGVLSYTVVRIITTFIAFCTELAGKYDEGNL-SFKTAWTYIVVINNCSQVWALYCLVLFYKAAYDELKPLNPFGKFLCIKLVVFASFWQGVLIAVLVKVGVISEKHTWVFYTVEDVANGIQNFLVCIEMFIFAIAHYYVFSHK 322          
BLAST of EWM28229.1 vs. NCBI_GenBank
Match: gi|514697087|ref|XP_004996113.1| (hypothetical protein PTSG_02616 [Salpingoeca rosetta] >gi|326436360|gb|EGD81930.1| hypothetical protein PTSG_02616 [Salpingoeca rosetta])

HSP 1 Score: 228.794 bits (582), Expect = 1.164e-64
Identity = 125/308 (40.58%), Postives = 185/308 (60.06%), Query Frame = 0
Query:   89 YVFYGCGTIFAAIILWQIISQHK---QRHVIAWSVGAIFVGIAVPFSLHDIHMHTMHYVNPKLQKYYIRILWMVPIYAIESWLALRFRGQKLFLETAREAYEAYVIYNFYMLLLHYLGGGQGVRDILKAKSDAGDKTVRLLFPFCCFRWKRSGQ-FINRCTVGVIQYVIIRFF---LAFITCLVEYMLDHGLGQREALEQTVFAILIIINVSQVWAVYCLVAFYHEFHYELRAINPFWKFVVVKMVVFLSFWQGLLFSGMAREGMLR---PYMDYSKQDIASGIQNLLICIEMAAISVAHKYVFSYKD 386
            +V   C  IF   I W  I  H+   + HVIAW V  +FV +AVP ++ D+ MH  H+ NP LQ++ IRIL+MVPIYAI+SWLALRF    ++ + ARE YEAYVIYNFY+ LL +L         +  +     K     FP CC +  R GQ F+N CT GV  YV++R     +AF + L +   D  L    AL++    + I  ++SQ WA+YCL+ FY+ F  +L+ + P  KF+ +K V+F SFWQ +  + + +  +++    +  Y+++ +A+GIQ+ L+CIEM   ++AH+YVFSYK+
Sbjct:  216 WVLTLCLIIFG-FIPWGAIELHRHNQETHVIAWFVAGVFVCLAVPMTIWDVAMHLKHWNNPMLQRHIIRILFMVPIYAIDSWLALRFPNINIYFDVARETYEAYVIYNFYVYLLVFLRQRPDFDIDIHKREPFPHK-----FPCCCLKPWRMGQPFLNACTHGVTSYVVVRLLTTIIAFASALGDRYGDGEL----ALDKAFVWVAIFNSLSQAWAMYCLILFYYAFKPDLKPMRPLPKFLTIKAVIFFSFWQSVFIAILVKADVIKESSTWTYYTQESVAAGIQDFLVCIEMFLAAIAHRYVFSYKE 513          
BLAST of EWM28229.1 vs. NCBI_GenBank
Match: gi|167534561|ref|XP_001748956.1| (hypothetical protein [Monosiga brevicollis MX1] >gi|163772636|gb|EDQ86286.1| predicted protein [Monosiga brevicollis MX1])

HSP 1 Score: 222.246 bits (565), Expect = 1.227e-63
Identity = 116/292 (39.73%), Postives = 172/292 (58.90%), Query Frame = 0
Query:  102 ILWQIIS---QHKQRHVIAWSVGAIFVGIAVPFSLHDIHMHTMHYVNPKLQKYYIRILWMVPIYAIESWLALRFRGQKLFLETAREAYEAYVIYNFYMLLLHYLGGGQGVRDILKAKSDAGDKTVRLLFPFCCFR-WKRSGQFINRCTVGVIQYVIIRFFLAFITCLVEYMLDHGLGQREALEQTVFAILIIIN-VSQVWAVYCLVAFYHEFHYELRAINPFWKFVVVKMVVFLSFWQGLLFSGMAREGMLRPYMD--YSKQDIASGIQNLLICIEMAAISVAHKYVFSYKD 386
            I W I+     H+Q HV AW    +FV +AVP +L DI  H  ++  P+LQ++ IRI+ MVPIYAI+SWL LRF    ++ +TARE YEAYV+YNFY+ LL +L   +     +  +  A     + + P CC   W+    FIN+CT  V  Y+++R  +  I+ +     D+G G      +  F  L I N +SQ WA+YCLV FY+ F Y+L  I P  KF+ +K V+F SFWQ +L + +   G++  + D  YS + +A+GIQ+ L+C+EM   +  H +VFSY++
Sbjct:   69 IPWGIVELRRYHQQTHVQAWFAAGVFVALAVPLTLWDIAQHLRYWYKPELQRHIIRIMMMVPIYAIDSWLGLRFPDYAIYFDTARETYEAYVLYNFYVYLLTFLRQRKDFDIDIHKRPPA-----QHMIPCCCLTPWRMGEPFINKCTHAVASYMVMRILVTLISFITSMTGDYGDGDMS--PKKSFMYLAIANMISQGWAMYCLVLFYYAFKYDLAPIKPVPKFLTIKAVIFFSFWQAVLIAILVEVGVIHEHADWVYSTESVAAGIQDFLVCVEMFIAAAVHHHVFSYRE 353          
BLAST of EWM28229.1 vs. NCBI_GenBank
Match: gi|1126185392|ref|XP_019625363.1| (PREDICTED: LOW QUALITY PROTEIN: transmembrane protein 184C-like [Branchiostoma belcheri])

HSP 1 Score: 221.861 bits (564), Expect = 1.896e-63
Identity = 131/324 (40.43%), Postives = 187/324 (57.72%), Query Frame = 0
Query:  103 LWQIISQHKQRHVIAWSVGAIFVGIAVPFSLHDIHMHTMHYVNPKLQKYYIRILWMVPIYAIESWLALRFRGQKLFLETAREAYEAYVIYNFYMLLLHYLGGGQGVRDILKAKSDAGDKTVRLLFPFCCF-RWKRSGQFINRCTVGVIQYVIIRFFLAFITCLVEYMLDHGLGQREALEQTVFAILIIINVSQVWAVYCLVAFYHEFHYELRAINPFWKFVVVKMVVFLSFWQGLLFSGMAREGMLRPYMDYSKQD----IASGIQNLLICIEMAAISVAHKYVFSYKDMEIIVEPNKMKPHPSWAAWIDILPWDVISDFREQV 421
            +W++  + K   V AW VG +FV +A+P +L  I  H +HY  P LQ++ IRILWMVPIYAI++W AL+F    ++L+T RE YEAYVIYNF + +L+YL     +  +   K     K V+ LFPFC    W+    FI  C  G I Y ++R     I  + E    +  G     +     ++II N+SQVWA+YCLV FYH    EL  I+PF KF+ VKMVVF SFWQ +  + + + G++     +  +D    +A+G+Q+ LICIEM   +VAH Y FS+K     ++PN     P +A+++ +  WDV SD R  V
Sbjct:   35 VWELRGESKA--VQAWFVGGMFVFMAIPIALLGILQHLIHYTQPHLQRHIIRILWMVPIYAIDAWFALKFAASTIYLDTIRECYEAYVIYNFMIFVLNYLQSEMDLEAVCARK-----KQVKHLFPFCFLPPWRMGKNFIAWCKHGAISYSVVRPITTIIALICELSGVYHEGDF-GWDSAWTYVVIINNISQVWALYCLVLFYHAMKEELAPISPFGKFLCVKMVVFFSFWQAVAIALLVKVGVINEKNTWDFRDGVDSVANGLQDFLICIEMFIAAVAHYYTFSHKPY---IDPNA-PSVPCFASFMAM--WDV-SDVRHDV 343          
BLAST of EWM28229.1 vs. NCBI_GenBank
Match: gi|148231039|ref|NP_001085464.1| (transmembrane protein 184C [Xenopus laevis] >gi|82184630|sp|Q6GQE1.1|T184C_XENLA RecName: Full=Transmembrane protein 184C; AltName: Full=Transmembrane protein 34 >gi|49117870|gb|AAH72804.1| MGC80135 protein [Xenopus laevis] >gi|1050397537|gb|OCT99726.1| hypothetical protein XELAEV_18005507mg [Xenopus laevis])

HSP 1 Score: 220.705 bits (561), Expect = 3.545e-63
Identity = 135/355 (38.03%), Postives = 197/355 (55.49%), Query Frame = 0
Query:   85 RRLLYVFYGCGTIFA-AIILWQIISQHKQRHVIAWSVGAIFVGIAVPFSLHDIHMHTMHYVNPKLQKYYIRILWMVPIYAIESWLALRFRGQKLFLETAREAYEAYVIYNFYMLLLHYLGG-GQGVRDILKAKSDAGDKTVRLLFPFCCF-RWKRSGQFINRCTVGVIQYVIIRFFLAFITCLVEYMLDHGLGQREALEQTVFAILIIINVSQVWAVYCLVAFYHEFHYELRAINPFWKFVVVKMVVFLSFWQGLLFSGMAREGMLRPYMDYSK-QDIASGIQNLLICIEMAAISVAHKYVFSYKDMEIIVEPNKMKPHPSWAAWIDILPWDVISDFREQVFN----GFGLRRKM 431
            R L+ + Y  G I    I +W++       H  AW +  IFV + +P SL  I  H +HY  P+LQK  IRILWMVPIY+++SW+AL++    ++++T RE YEAYVIYNF + LL+YL      +  +L+AK        R L P CC   W      + RC +GV+QY ++R     I  + +    +G G         + ++II NVSQV+A+YCLV FY     EL  I P  KF+ VKMVVF+SFWQ +  + + + G++    ++ + QD+A+G+Q+ +IC+EM   +VAH Y F+YK    + E  +     S+ A  DI   D+ +D  EQV N      G  RKM
Sbjct:   13 RPLVVLLYILGLIVGVPICIWKLQKMEVGVHTKAWFIAGIFVLMTIPISLWGILQHLVHYTQPELQKPIIRILWMVPIYSVDSWIALKYPDIAIYVDTCRECYEAYVIYNFMIFLLNYLTNRCPNLALVLEAKDQQ-----RHLPPLCCCPPWAMGDVLLFRCKLGVLQYTVVRPVTTVIALICQLTGVYGEGDFSVKNAWTY-LVIINNVSQVFAMYCLVLFYKVLKEELNPIQPVGKFLCVKMVVFVSFWQAVFIAILVKAGVISNTWEWKRVQDVATGLQDFIICVEMFLAAVAHHYSFTYKPY--VQEAEEGSCFDSFLAMWDIS--DIRADISEQVRNVGRTVLGRPRKM 357          
BLAST of EWM28229.1 vs. NCBI_GenBank
Match: gi|62858055|ref|NP_001016532.1| (transmembrane protein 184C [Xenopus tropicalis] >gi|123892435|sp|Q28CV2.1|T184C_XENTR RecName: Full=Transmembrane protein 184C; AltName: Full=Transmembrane protein 34 >gi|89267392|emb|CAJ83307.1| novel protein [Xenopus tropicalis] >gi|163916537|gb|AAI57534.1| transmembrane protein 34 [Xenopus tropicalis] >gi|1043435897|gb|OCA48523.1| hypothetical protein XENTR_v90000926mg [Xenopus tropicalis])

HSP 1 Score: 220.32 bits (560), Expect = 5.447e-63
Identity = 135/355 (38.03%), Postives = 197/355 (55.49%), Query Frame = 0
Query:   85 RRLLYVFYGCGTIFAA-IILWQIISQHKQRHVIAWSVGAIFVGIAVPFSLHDIHMHTMHYVNPKLQKYYIRILWMVPIYAIESWLALRFRGQKLFLETAREAYEAYVIYNFYMLLLHYLGG-GQGVRDILKAKSDAGDKTVRLLFPFCCF-RWKRSGQFINRCTVGVIQYVIIRFFLAFITCLVEYMLDHGLGQREALEQTVFAILIIINVSQVWAVYCLVAFYHEFHYELRAINPFWKFVVVKMVVFLSFWQGLLFSGMAREGMLRPYMDYSK-QDIASGIQNLLICIEMAAISVAHKYVFSYKDMEIIVEPNKMKPHPSWAAWIDILPWDVISDFREQVFN----GFGLRRKM 431
            R L+ + Y  G I    I +W++       H  AW +  IFV + +P SL  I  H +HY  P+LQK  IRILWMVPIY+++SW+AL++    ++++T RE YEAYVIYNF + LL+YL      +  +L+AK        R L P CC   W      + RC +GV+QY ++R     I  + +    +G G         + ++II NVSQV+A+YCLV FY     EL  I P  KF+ VKMVVF+SFWQ +  + + + G++    ++ K QD+A+G+Q+ +IC+EM   +VAH + F+YK    + E  +     S+ A  DI   D+ +D  EQV N      G  RKM
Sbjct:   13 RPLVVLLYIVGLIVGVPICIWKLQKMEVGVHTKAWFIAGIFVLMTIPISLWGILQHLVHYTQPELQKPIIRILWMVPIYSVDSWIALKYPDIAIYVDTCRECYEAYVIYNFMIFLLNYLTNRCPNLALVLEAKDQQ-----RHLPPLCCCPPWAMGDVLLFRCKLGVLQYTVVRPVTTVIALICQLTGVYGEGDFSVKNAWTY-LVIINNVSQVFAMYCLVLFYKVLKEELNPIQPVGKFLCVKMVVFVSFWQAVFIAILVKAGVISNTWEWKKVQDVATGLQDFIICVEMFLAAVAHHFSFTYKPY--VQEAEEGSCFDSFLAMWDIS--DIRADISEQVRNVGRTVLGRPRKM 357          
BLAST of EWM28229.1 vs. NCBI_GenBank
Match: gi|1069319354|ref|XP_018098763.1| (PREDICTED: transmembrane protein 184C-like [Xenopus laevis] >gi|1050394833|gb|OCT97023.1| hypothetical protein XELAEV_18009243mg [Xenopus laevis])

HSP 1 Score: 216.853 bits (551), Expect = 8.904e-62
Identity = 130/343 (37.90%), Postives = 192/343 (55.98%), Query Frame = 0
Query:   85 RRLLYVFYGCGTIFAA-IILWQIISQHKQRHVIAWSVGAIFVGIAVPFSLHDIHMHTMHYVNPKLQKYYIRILWMVPIYAIESWLALRFRGQKLFLETAREAYEAYVIYNFYMLLLHYLGG-GQGVRDILKAKSDAGDKTVRLLFPFCCF-RWKRSGQFINRCTVGVIQYVIIRFFLAFITCLVEYMLDHGLGQREALEQTVFAILIIINVSQVWAVYCLVAFYHEFHYELRAINPFWKFVVVKMVVFLSFWQGLLFSGMAREGMLRPYMDYSK-QDIASGIQNLLICIEMAAISVAHKYVFSYKDMEIIVEPNKMKPHPSWAAWIDILPWDVISDFREQVFN 423
            R L+   Y  G I    I +W++       H  AW +  IFV + +P SL  I  H +HY  P+LQK  IRILWMVPIY+++SW+AL++    ++++T RE YEAYVIYNF + LL+YL      +  +L+AK        R L P CC   W      + RC +GV+QY ++R     I  + +    +G G         + ++II NVSQ++A+YCLV FY     EL  I P  KF+ VKMVVF+SFWQ +  + + + G++    ++ + QD+A+G+Q+ +IC+EM   +VAH Y F+YK    + E  +     S+ A  DI   D+ +D  EQV N
Sbjct:   13 RPLVVFLYIVGLIVGVPICIWKLQKMEVGVHTKAWFIAGIFVLMTIPISLWGILQHLVHYTQPELQKPIIRILWMVPIYSVDSWIALKYPDIAIYVDTCRECYEAYVIYNFMIFLLNYLTNRCPNLALVLEAKDQR-----RHLPPLCCCPPWAMGDVLLFRCKLGVLQYTVVRPVTTVIALICQLTGVYGEGDFSVKNAWTY-LVIINNVSQLFAMYCLVLFYKVLKEELNPIQPVGKFLCVKMVVFVSFWQAVFIAILVKAGVISNTWEWKRVQDVATGLQDFIICVEMFLAAVAHHYSFTYKPY--VQEAEEGSCFDSFLAMWDIS--DIRADISEQVQN 345          
BLAST of EWM28229.1 vs. NCBI_GenBank
Match: gi|557000323|ref|XP_006002954.1| (PREDICTED: transmembrane protein 184C isoform X3 [Latimeria chalumnae])

HSP 1 Score: 214.157 bits (544), Expect = 1.229e-60
Identity = 134/357 (37.54%), Postives = 198/357 (55.46%), Query Frame = 0
Query:   85 RRLLYVFYGCGTIFA-AIILWQIISQHKQRHVIAWSVGAIFVGIAVPFSLHDIHMHTMHYVNPKLQKYYIRILWMVPIYAIESWLALRFRGQKLFLETAREAYEAYVIYNFYMLLLHYLG-GGQGVRDILKAKSDAGDKTVRLLFPFCCF-RWKRSGQFINRCTVGVIQYVIIRFFLAFITCLVEYMLDHGLGQREALEQTVFAILIIINVSQVWAVYCLVAFYHEFHYELRAINPFWKFVVVKMVVFLSFWQGLLFSGMAREGMLRPYMDY---SKQDIASGIQNLLICIEMAAISVAHKYVFSYKDMEIIVEPNKMKPHPSWAAWIDILPWDVISDFREQVFN----GFGLRRKM 431
            R L+ V Y  G +    + +W++       H  AW +  IFV + +P SL  I  H +HY  P+LQK  IRILWMVPIY+++SW+AL++ G  ++++T RE YEAYVIYNF + LL+YL      +  IL+AK   G      L P CC   W      + RC +GV+QY ++R F   I  + E +  +  G   + +     ++II N+SQ++A+YCLV FY     EL  I P  KF+ VKMVVF+SFWQ  L + + + G++     +   S + +A+G+Q+ +IC+EM   ++AH Y F+YK    + E  +     S+ A  DI   D+ +D  EQV N      G  RKM
Sbjct:   13 RPLVAVLYILGLLVVIPLCVWELQKSEVGTHTKAWFIAGIFVFMTIPISLWGILQHLVHYTQPELQKPIIRILWMVPIYSLDSWVALKYPGIAIYVDTCRECYEAYVIYNFMIFLLNYLTYQYPNLVLILEAKDQQGH-----LPPLCCCPAWAMGEVLLFRCKLGVLQYTVVRPFTTIIALICELVGVYDEGNF-SFKNAWTYLVIINNMSQLFAMYCLVLFYKVLREELNPIQPVGKFLCVKMVVFVSFWQAALIALLVKAGVISEKHTWDWKSVEAVATGLQDFIICVEMFFAAIAHHYSFTYK--PYVQEAEEGSCFDSFLAMWDIS--DIRADISEQVRNVGRTVLGRPRKM 359          
The following BLAST results are available for this feature:
BLAST of EWM28229.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585110574|gb|EWM28229.1|0.000e+0100.00transmembrane protein [Nannochloropsis gaditana][more]
gi|551663945|ref|XP_005834736.1|5.536e-7050.00hypothetical protein GUITHDRAFT_69286 [Guillardia ... [more]
gi|1176098339|ref|XP_020619831.1|1.102e-6541.18transmembrane protein 184C-like isoform X2 [Orbice... [more]
gi|514697087|ref|XP_004996113.1|1.164e-6440.58hypothetical protein PTSG_02616 [Salpingoeca roset... [more]
gi|167534561|ref|XP_001748956.1|1.227e-6339.73hypothetical protein [Monosiga brevicollis MX1] >g... [more]
gi|1126185392|ref|XP_019625363.1|1.896e-6340.43PREDICTED: LOW QUALITY PROTEIN: transmembrane prot... [more]
gi|148231039|ref|NP_001085464.1|3.545e-6338.03transmembrane protein 184C [Xenopus laevis] >gi|82... [more]
gi|62858055|ref|NP_001016532.1|5.447e-6338.03transmembrane protein 184C [Xenopus tropicalis] >g... [more]
gi|1069319354|ref|XP_018098763.1|8.904e-6237.90PREDICTED: transmembrane protein 184C-like [Xenopu... [more]
gi|557000323|ref|XP_006002954.1|1.229e-6037.54PREDICTED: transmembrane protein 184C isoform X3 [... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2420rna2420Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications