EWM28191.1, cds2408 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28191.1 vs. NCBI_GenBank
Match: gi|585110536|gb|EWM28191.1| (gtp cyclohydrolase i [Nannochloropsis gaditana]) HSP 1 Score: 714.146 bits (1842), Expect = 0.000e+0 Identity = 346/346 (100.00%), Postives = 346/346 (100.00%), Query Frame = 0
Query: 1 MAFHQRCTVSHGNGILKKTSNNSTSRKDENVPCHATPATCGNGRFPFQTAAAAAAAAAAAAVARLPLSEAGSDSLLLNKSSGETARGQQQEHYRHNGICCRGHDEDEDEEESVAEGGSGQRNGSVVHGENKLTAHGKHAQRAEGDEDSGGSSEEERLRRMSAAVRTLLECVGEDPDREGLRATPMRMAKALLYCTKGYDQTVAGVVGGAVFEEDHSEMVVVKDINVFSMCEHHMVPFLGKVHIGYIPRSKVLGLSKLARIAEMYARRLQIQERLTKQIAQAINEAIQPLGVAVVIEATHMCMVMRGVEKPGSATITSSVTGAFKSNAATRSEFFSLIKSGNGGYGR 346
MAFHQRCTVSHGNGILKKTSNNSTSRKDENVPCHATPATCGNGRFPFQTAAAAAAAAAAAAVARLPLSEAGSDSLLLNKSSGETARGQQQEHYRHNGICCRGHDEDEDEEESVAEGGSGQRNGSVVHGENKLTAHGKHAQRAEGDEDSGGSSEEERLRRMSAAVRTLLECVGEDPDREGLRATPMRMAKALLYCTKGYDQTVAGVVGGAVFEEDHSEMVVVKDINVFSMCEHHMVPFLGKVHIGYIPRSKVLGLSKLARIAEMYARRLQIQERLTKQIAQAINEAIQPLGVAVVIEATHMCMVMRGVEKPGSATITSSVTGAFKSNAATRSEFFSLIKSGNGGYGR
Sbjct: 1 MAFHQRCTVSHGNGILKKTSNNSTSRKDENVPCHATPATCGNGRFPFQTAAAAAAAAAAAAVARLPLSEAGSDSLLLNKSSGETARGQQQEHYRHNGICCRGHDEDEDEEESVAEGGSGQRNGSVVHGENKLTAHGKHAQRAEGDEDSGGSSEEERLRRMSAAVRTLLECVGEDPDREGLRATPMRMAKALLYCTKGYDQTVAGVVGGAVFEEDHSEMVVVKDINVFSMCEHHMVPFLGKVHIGYIPRSKVLGLSKLARIAEMYARRLQIQERLTKQIAQAINEAIQPLGVAVVIEATHMCMVMRGVEKPGSATITSSVTGAFKSNAATRSEFFSLIKSGNGGYGR 346
BLAST of EWM28191.1 vs. NCBI_GenBank
Match: gi|695442303|ref|XP_009533421.1| (hypothetical protein PHYSODRAFT_355289 [Phytophthora sojae] >gi|348670855|gb|EGZ10676.1| hypothetical protein PHYSODRAFT_355289 [Phytophthora sojae]) HSP 1 Score: 292.352 bits (747), Expect = 5.152e-95 Identity = 135/187 (72.19%), Postives = 161/187 (86.10%), Query Frame = 0
Query: 153 EEERLRRMSAAVRTLLECVGEDPDREGLRATPMRMAKALLYCTKGYDQTVAGVVGGAVFEEDHSEMVVVKDINVFSMCEHHMVPFLGKVHIGYIPRSKVLGLSKLARIAEMYARRLQIQERLTKQIAQAINEAIQPLGVAVVIEATHMCMVMRGVEKPGSATITSSVTGAFKSNAATRSEFFSLIKS 339
++++L +M+AAV TLLEC+GEDP REGL TPMRMAKALLY TKGY Q++A V+ AVFEEDH EMV+V+DI+++SMCEHHMVPF GKVHIGYIP KVLGLSKLAR++E+++RRLQ+QERLTKQIA AI I+P GVAVVIEATHMCMVMRGVEK G++T+TSSV G FKS+ TRSEF SLI S
Sbjct: 80 DKQKLDKMAAAVTTLLECIGEDPQREGLLKTPMRMAKALLYNTKGYGQSLADVLNEAVFEEDHDEMVIVRDIDLYSMCEHHMVPFAGKVHIGYIPNGKVLGLSKLARVSEVFSRRLQVQERLTKQIANAIMGVIEPKGVAVVIEATHMCMVMRGVEKSGASTVTSSVLGVFKSDPRTRSEFMSLIHS 266
BLAST of EWM28191.1 vs. NCBI_GenBank
Match: gi|1214713609|gb|OWZ24495.1| (GTP cyclohydrolase I [Phytophthora megakarya]) HSP 1 Score: 290.426 bits (742), Expect = 2.140e-94 Identity = 134/185 (72.43%), Postives = 160/185 (86.49%), Query Frame = 0
Query: 153 EEERLRRMSAAVRTLLECVGEDPDREGLRATPMRMAKALLYCTKGYDQTVAGVVGGAVFEEDHSEMVVVKDINVFSMCEHHMVPFLGKVHIGYIPRSKVLGLSKLARIAEMYARRLQIQERLTKQIAQAINEAIQPLGVAVVIEATHMCMVMRGVEKPGSATITSSVTGAFKSNAATRSEFFSLI 337
++E+L +M+AAV TLLEC+GEDP REGL TPMRMAKA+LY TKGY Q++A V+ AVFEEDH EMV+V+DI+++SMCEHHMVPF GKVHIGYIP KVLGLSKLAR++E+++RRLQ+QERLTKQIA AI I+P GVAVVIEATHMCMVMRGVEK G++T+TSSV G FKS+ TRSEF SLI
Sbjct: 65 DKEKLEKMAAAVTTLLECIGEDPKREGLVKTPMRMAKAMLYNTKGYGQSLADVLNEAVFEEDHDEMVIVRDIDLYSMCEHHMVPFTGKVHIGYIPNGKVLGLSKLARVSEVFSRRLQVQERLTKQIANAIMGVIEPKGVAVVIEATHMCMVMRGVEKSGASTVTSSVLGVFKSDPRTRSEFMSLI 249
BLAST of EWM28191.1 vs. NCBI_GenBank
Match: gi|301107826|ref|XP_002902995.1| (GTP cyclohydrolase I [Phytophthora infestans T30-4] >gi|262098113|gb|EEY56165.1| GTP cyclohydrolase I [Phytophthora infestans T30-4]) HSP 1 Score: 289.271 bits (739), Expect = 4.968e-94 Identity = 134/185 (72.43%), Postives = 160/185 (86.49%), Query Frame = 0
Query: 153 EEERLRRMSAAVRTLLECVGEDPDREGLRATPMRMAKALLYCTKGYDQTVAGVVGGAVFEEDHSEMVVVKDINVFSMCEHHMVPFLGKVHIGYIPRSKVLGLSKLARIAEMYARRLQIQERLTKQIAQAINEAIQPLGVAVVIEATHMCMVMRGVEKPGSATITSSVTGAFKSNAATRSEFFSLI 337
++E+L +M+AAV TLLEC+GEDP REGL TPMRMAKALLY TKGY Q+++ V+ AVFEEDH EMV+V+DI+++SMCEHHMVPF GKVHIGYIP KVLGLSKLAR++E+++RRLQ+QERLTKQIA AI I+P GVAVVIEATHMCMVMRGVEK G++T+TSSV G FKS+ TRSEF SLI
Sbjct: 59 DKEKLEKMAAAVTTLLECIGEDPQREGLVKTPMRMAKALLYNTKGYGQSLSDVLNEAVFEEDHDEMVIVRDIDLYSMCEHHMVPFTGKVHIGYIPNGKVLGLSKLARVSEVFSRRLQVQERLTKQIANAIMGVIEPKGVAVVIEATHMCMVMRGVEKSGASTVTSSVLGVFKSDPRTRSEFMSLI 243
BLAST of EWM28191.1 vs. NCBI_GenBank
Match: gi|675178895|ref|XP_008898332.1| (GTP cyclohydrolase I [Phytophthora parasitica INRA-310] >gi|566008687|gb|ETI31598.1| GTP cyclohydrolase I [Phytophthora parasitica P1569] >gi|567946164|gb|ETK71975.1| GTP cyclohydrolase I [Phytophthora parasitica] >gi|567974825|gb|ETL25402.1| GTP cyclohydrolase I [Phytophthora parasitica] >gi|568004305|gb|ETL78629.1| GTP cyclohydrolase I [Phytophthora parasitica] >gi|568034214|gb|ETM31890.1| GTP cyclohydrolase I [Phytophthora parasitica] >gi|568101248|gb|ETN15934.1| GTP cyclohydrolase I [Phytophthora parasitica INRA-310] >gi|570312368|gb|ETO60316.1| GTP cyclohydrolase I [Phytophthora parasitica P1976] >gi|570936155|gb|ETP01412.1| GTP cyclohydrolase I [Phytophthora parasitica CJ01A1] >gi|570966464|gb|ETP29583.1| GTP cyclohydrolase I [Phytophthora parasitica P10297] >gi|970659334|gb|KUF96979.1| hypothetical protein AM588_10006621 [Phytophthora nicotianae] >gi|970664498|gb|KUG01392.1| GTP cyclohydrolase 1 [Phytophthora nicotianae]) HSP 1 Score: 288.886 bits (738), Expect = 6.314e-94 Identity = 134/185 (72.43%), Postives = 159/185 (85.95%), Query Frame = 0
Query: 153 EEERLRRMSAAVRTLLECVGEDPDREGLRATPMRMAKALLYCTKGYDQTVAGVVGGAVFEEDHSEMVVVKDINVFSMCEHHMVPFLGKVHIGYIPRSKVLGLSKLARIAEMYARRLQIQERLTKQIAQAINEAIQPLGVAVVIEATHMCMVMRGVEKPGSATITSSVTGAFKSNAATRSEFFSLI 337
++E+L +M+AAV TLLEC+GEDP REGL TPMRMAKALLY TKGY Q++ V+ AVFEEDH EMV+V+DI+++SMCEHHMVPF GKVHIGYIP KVLGLSKLAR++E+++RRLQ+QERLTKQIA AI I+P GVAVVIEATHMCMVMRGVEK G++T+TSSV G FKS+ TRSEF SLI
Sbjct: 59 DKEKLEKMAAAVTTLLECIGEDPQREGLVKTPMRMAKALLYNTKGYGQSLTDVLNEAVFEEDHDEMVIVRDIDLYSMCEHHMVPFTGKVHIGYIPNGKVLGLSKLARVSEVFSRRLQVQERLTKQIANAIMGVIEPKGVAVVIEATHMCMVMRGVEKSGASTVTSSVLGVFKSDPRTRSEFMSLI 243
BLAST of EWM28191.1 vs. NCBI_GenBank
Match: gi|953488203|emb|CEG48220.1| (gtp cyclohydrolase i [Plasmopara halstedii]) HSP 1 Score: 288.5 bits (737), Expect = 8.291e-94 Identity = 134/185 (72.43%), Postives = 160/185 (86.49%), Query Frame = 0
Query: 153 EEERLRRMSAAVRTLLECVGEDPDREGLRATPMRMAKALLYCTKGYDQTVAGVVGGAVFEEDHSEMVVVKDINVFSMCEHHMVPFLGKVHIGYIPRSKVLGLSKLARIAEMYARRLQIQERLTKQIAQAINEAIQPLGVAVVIEATHMCMVMRGVEKPGSATITSSVTGAFKSNAATRSEFFSLI 337
++ +L +M+AAV TLLEC+GEDP REGL TPMRMAKALLY TKGY Q++A V+ AVFEEDH EMV+V+DI+++SMCEHHMVPF GKVHIGYIP KVLGLSKLAR++E+++RRLQ+QERLTKQIA AI I+P GVAVVIEATHMCMVMRGVEK G++T+TSSV G FKS++ TRSEF SLI
Sbjct: 59 DKAKLEKMAAAVTTLLECIGEDPHREGLVKTPMRMAKALLYNTKGYSQSLADVLNEAVFEEDHDEMVIVRDIDLYSMCEHHMVPFTGKVHIGYIPNGKVLGLSKLARVSEVFSRRLQVQERLTKQIATAIMGVIEPKGVAVVIEATHMCMVMRGVEKSGASTVTSSVLGVFKSDSRTRSEFMSLI 243
BLAST of EWM28191.1 vs. NCBI_GenBank
Match: gi|831792276|ref|XP_012759990.1| (hypothetical protein SAMD00019534_036440 [Acytostelium subglobosum LB1] >gi|735994780|dbj|GAM20469.1| hypothetical protein SAMD00019534_036440 [Acytostelium subglobosum LB1]) HSP 1 Score: 288.115 bits (736), Expect = 1.674e-93 Identity = 140/237 (59.07%), Postives = 179/237 (75.53%), Query Frame = 0
Query: 103 HDEDEDEEESVAEGGSGQRNGSVVHGENKLTAHGKHAQRAEGDEDSGGSSEEERLRRMSAAVRTLLECVGEDPDREGLRATPMRMAKALLYCTKGYDQTVAGVVGGAVFEEDHSEMVVVKDINVFSMCEHHMVPFLGKVHIGYIPRSKVLGLSKLARIAEMYARRLQIQERLTKQIAQAINEAIQPLGVAVVIEATHMCMVMRGVEKPGSATITSSVTGAFKSNAATRSEFFSLIKS 339
H E+E+++E + E GS SV K R D + E+ L +M V++LLE +GEDP+REGL+ TP+RMAKAL+Y T GY+ +V ++GGA+F E+H EMVVV+DI++FS+CEHHMVPF GK HIGYIP KVLGLSKLARIAE++ARRLQ+QERLT+QIA AI EA+ PLGVAVVIEA+HMCMVMRGV+KPGS+T+TSSV G F+ ++ TR+EFFSLI+S
Sbjct: 11 HKEEENDDEEIYENGSKALMKSV-----------KTKTR-----DPASAKCEQVLGKMQDNVKSLLESIGEDPEREGLQKTPLRMAKALMYFTHGYELSVDEIIGGAIFNENHHEMVVVRDIDIFSLCEHHMVPFYGKCHIGYIPDHKVLGLSKLARIAEIFARRLQVQERLTRQIALAIQEALNPLGVAVVIEASHMCMVMRGVQKPGSSTVTSSVCGVFEVDSRTRAEFFSLIRS 231
BLAST of EWM28191.1 vs. NCBI_GenBank
Match: gi|1160563109|ref|XP_020430444.1| (GTP cyclohydrolase I [Polysphondylium pallidum PN500] >gi|281204123|gb|EFA78319.1| GTP cyclohydrolase I [Polysphondylium pallidum PN500]) HSP 1 Score: 285.034 bits (728), Expect = 1.274e-92 Identity = 135/214 (63.08%), Postives = 169/214 (78.97%), Query Frame = 0
Query: 127 HGENKLTAHGKHAQRAEGDEDSGGSSEEERLRRMSAAVRTLLECVGEDPDREGLRATPMRMAKALLYCTKGYDQTVAGVVGGAVFEEDHSEMVVVKDINVFSMCEHHMVPFLGKVHIGYIPRSKVLGLSKLARIAEMYARRLQIQERLTKQIAQAINEAIQPLGVAVVIEATHMCMVMRGVEKPGSATITSSVTGAFKSNAATRSEFFSLIKSG 340
+G N L A K R + E+ L M V++LLE +GEDP+REGL+ TP+RMAKAL+Y T GY+ +V ++GGA+F E+H EMVVV+DI++FS+CEHHMVPF GK HIGYIP KVLGLSKLARIAE++ARRLQ+QERLT+QIA AINEA+ P+GVAVVIEA+HMCMVMRGV+KPGS+T+TSSV G F+ ++ TRSEFFSLI+S
Sbjct: 26 NGTNALLASVKTKVR------DASVNNEKTLALMQGNVKSLLESIGEDPEREGLQKTPLRMAKALMYFTHGYELSVDEIIGGAIFNENHHEMVVVRDIDIFSLCEHHMVPFYGKCHIGYIPDRKVLGLSKLARIAEIFARRLQVQERLTRQIALAINEALNPMGVAVVIEASHMCMVMRGVQKPGSSTVTSSVCGVFEQDSRTRSEFFSLIRSN 233
BLAST of EWM28191.1 vs. NCBI_GenBank
Match: gi|19114393|ref|NP_593481.1| (GTP cyclohydrolase (predicted) [Schizosaccharomyces pombe 972h-] >gi|3183014|sp|O13774.1|GCH1_SCHPO RecName: Full=GTP cyclohydrolase 1; AltName: Full=GTP cyclohydrolase I; Short=GTP-CH-I >gi|2370485|emb|CAB11513.1| GTP cyclohydrolase (predicted) [Schizosaccharomyces pombe]) HSP 1 Score: 285.034 bits (728), Expect = 1.603e-92 Identity = 126/195 (64.62%), Postives = 165/195 (84.62%), Query Frame = 0
Query: 143 EGDEDSGGSSEEERLRRMSAAVRTLLECVGEDPDREGLRATPMRMAKALLYCTKGYDQTVAGVVGGAVFEEDHSEMVVVKDINVFSMCEHHMVPFLGKVHIGYIPRSKVLGLSKLARIAEMYARRLQIQERLTKQIAQAINEAIQPLGVAVVIEATHMCMVMRGVEKPGSATITSSVTGAFKSNAATRSEFFSLI 337
+G + ++EEE+++++S A+ T+LEC+GEDP+R+GL TP R AKA+LY TKGY+Q + V+ AVF+EDH EMV+V+DI+VFS+CEHH+VPF+GK+HIGYIPR +VLGLSKLARIA M++RRLQ+QERLTKQ+AQAI ++P GVAVV+EATHMCMVMRGVEKPGS+T+TSS+TG F+ + TR EFF LI
Sbjct: 38 QGTQRRIDTAEEEKVKKISNAISTILECLGEDPERQGLLGTPERYAKAMLYFTKGYEQNLTEVINEAVFQEDHEEMVIVRDIDVFSLCEHHLVPFIGKIHIGYIPRKRVLGLSKLARIANMFSRRLQVQERLTKQVAQAIQAVLKPQGVAVVMEATHMCMVMRGVEKPGSSTVTSSLTGIFQRSHKTREEFFRLI 232
BLAST of EWM28191.1 vs. NCBI_GenBank
Match: gi|325183855|emb|CCA18313.1| (GTP cyclohydrolase I putative [Albugo laibachii Nc14] >gi|325183956|emb|CCA18414.1| GTP cyclohydrolase I putative [Albugo laibachii Nc14]) HSP 1 Score: 284.648 bits (727), Expect = 5.514e-92 Identity = 140/236 (59.32%), Postives = 176/236 (74.58%), Query Frame = 0
Query: 109 EEESVAEGGSGQRNGSVVHGENKLT-------AHGKHAQRAEGDEDSGGSSEEERLRRMSAAVRTLLECVGEDPDREGLRATPMRMAKALLYCTKGYDQTVAGVVGGAVFEEDHSEMVVVKDINVFSMCEHHMVPFLGKVHIGYIPRSKVLGLSKLARIAEMYARRLQIQERLTKQIAQAINEAIQPLGVAVVIEATHMCMVMRGVEKPGSATITSSVTGAFKSNAATRSEFFSLI 337
E E++ + G V +G N +T G R E D + +L +M+ AV+TLLEC+GED +REGLR TP+RMAKALLY TKGY Q+++ V+ AVFEEDH EMV+V+DI+++S+CEHH+VPF+GKVHIGYIP KVLGLSKLAR+++++ARRLQ+QERLTKQIAQAI IQP GV VVIEATHMCMVMRGVEK G++T+TSSV G FK++ TRSEF SLI
Sbjct: 28 EPETIKQNGYHHSKTLVANGSNGITNTSDLETLSGALPSRFENDY----KLDHLKLNKMADAVKTLLECMGEDVEREGLRKTPLRMAKALLYNTKGYSQSLSQVLNQAVFEEDHDEMVIVRDIDLYSLCEHHVVPFIGKVHIGYIPNGKVLGLSKLARVSDVFARRLQVQERLTKQIAQAIMGVIQPRGVGVVIEATHMCMVMRGVEKSGASTVTSSVLGCFKTDPRTRSEFMSLI 259 The following BLAST results are available for this feature:
BLAST of EWM28191.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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