EWM28153.1, cds2407 (CDS) Nannochloropsis gaditana
|
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28153.1 vs. NCBI_GenBank
Match: gi|585110498|gb|EWM28153.1| (phenylalanyl-trna synthetase beta chain [Nannochloropsis gaditana]) HSP 1 Score: 1274.61 bits (3297), Expect = 0.000e+0 Identity = 625/625 (100.00%), Postives = 625/625 (100.00%), Query Frame = 0
Query: 1 MPTISLVRDDLFNALGKSYTDDEFQDVCFAFGIELDEITTEGELASKDAGSKGKCGPDGGAVVYKVDVPANRYDILCMEGLTRALRIFLELDKAPSYRKVEPTDNGGTRTVMSVEASTASVRPFVACAILRDMTFDPLVYKSFIDLQEHLHRNICRRRTLVAIGTHDLDTLRGPFRYTAADPASIQFSPLTSDDGRVFNAKELLDFYRTDESAKHLSPYTDIIYEAPRYPVLYDSRGTVLSLPPVINGRHSRITLQTRNVFIECTATDKTKANIVLDTVVTMFSQHCARPFTVEPVDVVYEGPELSVETTPLLSTRKVAAKMSEIEGLVGRDLGPELVCQLCNKMQLGPASYHAETDTVVVTVPPTRSDVLHAVDVIEDVAIAFGYNNLPIKVPGTLTVGAPLPINAFSDLLRDEIARAGYLEVLTHGLCSRAENFAKLRRPETKAVSLSNPANEEYEIVRTTLLPGLLKVLQHNRAAQVKDGLRFFEISDVVLRDDHTDVGAKNIRRLVASSTSMVAGFESIHGLVDRVMLLVQIGPTEAYAGNSMRGEERMAVLKDKIQYYIVPSDDPAYFPGRCADVILVEDGKKSKPLKVGTFGVLHPEVLKAYDIPFPTSMLEIDLEPLI 625
MPTISLVRDDLFNALGKSYTDDEFQDVCFAFGIELDEITTEGELASKDAGSKGKCGPDGGAVVYKVDVPANRYDILCMEGLTRALRIFLELDKAPSYRKVEPTDNGGTRTVMSVEASTASVRPFVACAILRDMTFDPLVYKSFIDLQEHLHRNICRRRTLVAIGTHDLDTLRGPFRYTAADPASIQFSPLTSDDGRVFNAKELLDFYRTDESAKHLSPYTDIIYEAPRYPVLYDSRGTVLSLPPVINGRHSRITLQTRNVFIECTATDKTKANIVLDTVVTMFSQHCARPFTVEPVDVVYEGPELSVETTPLLSTRKVAAKMSEIEGLVGRDLGPELVCQLCNKMQLGPASYHAETDTVVVTVPPTRSDVLHAVDVIEDVAIAFGYNNLPIKVPGTLTVGAPLPINAFSDLLRDEIARAGYLEVLTHGLCSRAENFAKLRRPETKAVSLSNPANEEYEIVRTTLLPGLLKVLQHNRAAQVKDGLRFFEISDVVLRDDHTDVGAKNIRRLVASSTSMVAGFESIHGLVDRVMLLVQIGPTEAYAGNSMRGEERMAVLKDKIQYYIVPSDDPAYFPGRCADVILVEDGKKSKPLKVGTFGVLHPEVLKAYDIPFPTSMLEIDLEPLI
Sbjct: 1 MPTISLVRDDLFNALGKSYTDDEFQDVCFAFGIELDEITTEGELASKDAGSKGKCGPDGGAVVYKVDVPANRYDILCMEGLTRALRIFLELDKAPSYRKVEPTDNGGTRTVMSVEASTASVRPFVACAILRDMTFDPLVYKSFIDLQEHLHRNICRRRTLVAIGTHDLDTLRGPFRYTAADPASIQFSPLTSDDGRVFNAKELLDFYRTDESAKHLSPYTDIIYEAPRYPVLYDSRGTVLSLPPVINGRHSRITLQTRNVFIECTATDKTKANIVLDTVVTMFSQHCARPFTVEPVDVVYEGPELSVETTPLLSTRKVAAKMSEIEGLVGRDLGPELVCQLCNKMQLGPASYHAETDTVVVTVPPTRSDVLHAVDVIEDVAIAFGYNNLPIKVPGTLTVGAPLPINAFSDLLRDEIARAGYLEVLTHGLCSRAENFAKLRRPETKAVSLSNPANEEYEIVRTTLLPGLLKVLQHNRAAQVKDGLRFFEISDVVLRDDHTDVGAKNIRRLVASSTSMVAGFESIHGLVDRVMLLVQIGPTEAYAGNSMRGEERMAVLKDKIQYYIVPSDDPAYFPGRCADVILVEDGKKSKPLKVGTFGVLHPEVLKAYDIPFPTSMLEIDLEPLI 625
BLAST of EWM28153.1 vs. NCBI_GenBank
Match: gi|299471764|emb|CBN76985.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 723.005 bits (1865), Expect = 0.000e+0 Identity = 371/639 (58.06%), Postives = 461/639 (72.14%), Query Frame = 0
Query: 1 MPTISLVRDDLFNALGKSYTDDEFQDVCFAFGIELDEITTEG---ELASKDAGSKGKCGPDGGAVVYKVDVPANRYDILCMEGLTRALRIFLELDKAPSYRKVEPTDNGGTRTVMSVEASTASVRPFVACAILRDMTFDPLVYKSFIDLQEHLHRNICRRRTLVAIGTHDLDTLRGPFRYTAADPASIQFSPLTSDDGRVFNAKELLDFYRTDESAKHLSPYTDIIYEAPRYPVLYDSRGTVLSLPPVINGRHSRITLQTRNVFIECTATDKTKANIVLDTVVTMFSQHCARPFTVEPVDVVYEGPELSVETTPLLSTRKVAAKMSEIEGLVGRDLGPELVCQLCNKMQLGPA-----SYHAETDTVVVTVPPTRSDVLHAVDVIEDVAIAFGYNNLPIKVPGTLTVGAPLPINAFSDLLRDEIARAGYLEVLTHGLCSRAENFAKLRRPETKAVSLSNPANEEYEIVRTTLLPGLLKVLQHNRAAQVKDGLRFFEISDVVLRDDHTDVGAKNIRRLVASSTSMVAGFESIHGLVDRVMLLVQIGPTEAYAGNSMRGEERMAVLKDKIQYYIVPSDDPAYFPGRCADVILV----EDGKKS--KPLKVGTFGVLHPEVLKAYDIPFPTSMLEIDLEPLI 625
MPT+ + RDDLF ALG YT+ EF ++CF FGIELDE+T+E E S+ G G G VVYK+D+PANRYD+LC+EGL RALR+FL + +P +R VEP G R M+V + A +RP+V CA+LR +TF+ YKSF+DLQ+ LH+NICRRRTLVAIG HDL+T++GPFRY A P+ I F PLT D FNAK LLD Y TD S KHL PYT IIYE+ YPV+ D+ G VLSLPPVING SRI L+T +VFIECTATD TKANIVLDT+VTMFS++C F+VEPVDV Y+ V+TTPLLSTR A ++EI ++G ++ E +C+LC KMQLGPA + VTVPPTRSD+LH VDV+EDVAIA+G+N +P +P TLTVG P+N F DLLR+EI+RAGY E+LTHGLCSRAENF LRR E VSLSNP + EYE+VRT+LLPG LK Q NRA VKDG+R FEISDVV+RDD D GA+N RRLVA+ AGFE IHGLVDR+M LVQ+ P+E Y+GN R ++ ++Y I P D P +FPGRCADV+L+ E+G + + +++G+FG+LHPEVLKAYD+ P+S +EIDLEPL+
Sbjct: 1 MPTLGVNRDDLFEALGHVYTEKEFDELCFEFGIELDEVTSEAIELEKQSQGGGRAGGAGAASTDVVYKIDIPANRYDLLCIEGLARALRVFLGKEDSPVFRTVEPAGGAGARQKMTVGSGAAKIRPYVVCAVLRGVTFNSKSYKSFMDLQDKLHQNICRRRTLVAIGAHDLNTVKGPFRYDAVPPSDIDFVPLTPSDQGTFNAKALLDLYNTDPSVKHLKPYTPIIYESEVYPVIKDANGDVLSLPPVINGHLSRIRLETTDVFIECTATDLTKANIVLDTMVTMFSEYCGDKFSVEPVDVTYDDNSGDVKTTPLLSTRTEKASVAEICSIIGVEIEEEEICRLCTKMQLGPAEVVEMGEEEGGKGIKVTVPPTRSDILHPVDVVEDVAIAYGFNKIPTTLPATLTVGGHQPLNNFGDLLREEISRAGYTEMLTHGLCSRAENFKMLRRQEEPCVSLSNPKHVEYEVVRTSLLPGALKTAQFNRAMPVKDGVRLFEISDVVVRDDSCDTGARNCRRLVATYMGPTAGFEIIHGLVDRIMSLVQVAPSEEYSGNDPRARVG-GPWRENMRYRIDPVDRPTFFPGRCADVLLMVKDTEEGGSAGWREIRLGSFGMLHPEVLKAYDLRDPSSAVEIDLEPLM 638
BLAST of EWM28153.1 vs. NCBI_GenBank
Match: gi|1173948470|gb|OQR96595.1| (phenylalanyl-tRNA synthetase beta chain [Thraustotheca clavata]) HSP 1 Score: 681.404 bits (1757), Expect = 0.000e+0 Identity = 344/635 (54.17%), Postives = 453/635 (71.34%), Query Frame = 0
Query: 1 MPTISLVRDDLFNALGKSYTDDEFQDVCFAFGIELDEITTEGELASKDAGSKGKCGPDGGAVVYKVDVPANRYDILCMEGLTRALRIFLELDKAPSYRKVEPTDNGGTRTVMSVEASTA--SVRPFVACAILRDMTFDPLVYKSFIDLQEHLHRNICRRRTLVAIGTHDLDTLRGPFRYTAADPASIQFSPLTSDDGRVFNAKELLDFYRTDESAKHLSPYTDIIYEAPRYPVLYDSRGTVLSLPPVINGRHSRITLQTRNVFIECTATDKTKANIVLDTVVTMFSQHCARPFTVEPVDVVYEGPELSVETTPLLSTRKVAAKMSEIEGLVGR-----DLGPELVCQLCNKMQLGPASYHAETDTVVVTVPPTRSDVLHAVDVIEDVAIAFGYNNLPIKVPGTLTVGAPLPINAFSDLLRDEIARAGYLEVLTHGLCSRAENFAKLRRPET--KAVSLSNPANEEYEIVRTTLLPGLLKVLQHNRAAQVKDGLRFFEISDVVLRDDHTDVGAKNIRRLVASSTSMVAGFESIHGLVDRVMLL--VQIGPTEAYAGNSMRGEERMAVLKDKIQYYIVPSDDPAYFPGRCADVILVEDGKKSKPLKVGTFGVLHPEVLKAYDIPFPTSMLEIDLEPL 624
MPT+ + RD+LF A+G+S+TD+EF +CF FGIELDE+T+E ++ K+ G+K G D AV+YK+DVPANRYD+LC+EG+ RALR+F++ + P +R VEP + V++V+ ++RPFV ILRD+ F P Y SFIDLQ+ LH+NICRRRTLVAIGTHDLDT++GPF Y P +I+F PL R FNA+ELLD YRT+ KHL PYTDIIY+ P YP++YD TVLSLPP+IN HS+I L T+NVFIECTATD TKAN+VL+T+V MFSQ+CA PFTVEPV++VYE + E+TP +S R+V K+ +I+ ++ DL E +CQLC KMQL A+Y E+ ++ V VPPTRSD+LH VDV+EDV IA+GY+N+P+ P T T+G PIN D LRDEI+RAGYLE+LTHGLCS ENF L + + AV LSNPA E+E+VRTT++PG+LK +Q+N++ +K+GL+ FEISDVV+ DD +DVGAKNIRRL A T GFE IHGLVDRVM L +Q + Y N + Y +VPS + +FPGR AD++L ++G+K +K+GTFGVLHP VL YD+ +P S++E+D+EPL
Sbjct: 421 MPTVGVKRDELFAAIGQSFTDEEFDQLCFEFGIELDEVTSERKMKEKEQGAKAASGADD-AVIYKIDVPANRYDLLCVEGIARALRVFMQKELPPVFRVVEPKK----KQVITVKKGMGLETMRPFVVSCILRDVKFTPERYASFIDLQDKLHQNICRRRTLVAIGTHDLDTIQGPFTYEGQAPENIRFVPLAQT--REFNARELLDHYRTNPDFKHLKPYTDIIYDFPTYPIIYDKNRTVLSLPPIINSEHSKIKLSTKNVFIECTATDITKANVVLNTMVAMFSQYCAAPFTVEPVEIVYEN-DGHKESTPNMSNREVITKVKDIQSMLFGTREPIDLSVERICQLCVKMQLQ-ANYLKESHSIKVQVPPTRSDILHPVDVMEDVGIAYGYDNIPVTHPPTQTIGQAQPINKLVDHLRDEISRAGYLELLTHGLCSHDENFKFLNQKDNGKSAVVLSNPATIEFEVVRTTMIPGVLKTVQNNKSMSLKEGLKLFEISDVVVLDDASDVGAKNIRRLCALYTGQTDGFEVIHGLVDRVMQLLGIQCSLEDGYDKN--------------LFYTMVPSSNATFFPGRSADIVLSQNGEK---IKLGTFGVLHPIVLNHYDLLYPCSVVEMDIEPL 1029
BLAST of EWM28153.1 vs. NCBI_GenBank
Match: gi|1072237738|gb|OEU22465.1| (beta subunit of phenylalanyl-tRNA synthetase [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 681.404 bits (1757), Expect = 0.000e+0 Identity = 353/654 (53.98%), Postives = 453/654 (69.27%), Query Frame = 0
Query: 1 MPTISLVRDDLFNALGKSYTDDEFQDVCFAFGIELDEITTEGELASKDAG---SKGKCGPDGGAVVYKVDVPANRYDILCMEGLTRALRIFLELDKAPSYRKVEPTDNGGTRTVMSVEASTASVRPFVACAILRDMTFDPLVYKSFIDLQEHLHRNICRRRTLVAIGTHDLDTLRGPFRYTAADPASIQFSPLTSDDGRVFNAKELLDFYRTDESAKHLSPYTDIIYEAPRYPVLYDSRGTVLSLPPVINGRHSRITLQTRNVFIECTATDKTKANIVLDTVVTMFSQHCARPFTVEPVDVVYE---GPELSVETTPLLSTRKVAAKMSEIEGLVGRDLGPELVCQLCNKMQLGPASYHAETDTVV-VTVPPTRSDVLHAVDVIEDVAIAFGYNNLPIKVPGTLTVGAPLPINAFSDLLRDEIARAGYLEVLTHGLCSRAENFAKLRRP--ETKAVSLSNPANEEYEIVRTTLLPGLLKVLQHNRAAQVKDGLRFFEISDVVLRDDH-----TDVGAKNIRRLVASSTSMVAGFESIHGLVDRVMLLVQIGPTEAYAGNSMRG--------EERMAVLKDKIQYYI--VPSDDPA-----YFPGRCADVILVEDGKKSKPLKVGTFGVLHPEVLKAYDIPFPTSMLEIDLEPLI 625
MPT++L +D LF LG++YTDDEF ++CF FG+ELDEIT+E E A K + SK + V+YK+D+PANRYD+LC+EGL R LRIFL AP Y VE GG+ TV ++ +T ++RPFV AIL+D+ F P Y SFIDLQ+ LHRN+CR+RTLVAIGTHDLDT+ GPF Y A P I+F PLT DD FNAK+L+++Y T+ + KHL PY II +P YPV+ DS+ VLSLPP+ING HS+ITL T+NVFIECTATD TKANIVLDTVVTMFS++CA+PFTV PV V Y+ G + +P+LS R+ AK+ L+G +L P + LCNK+QLGPA E DT++ VTVPPTRSD+LHAVD+ ED+AIA+GYNN+ +VP T TVG P+N DLLR+EI RAGY EVLTHGLCS +NF L+ P E AVSLSNPAN EY++VRTTLLPGLLK QHN++A G + FEISD V+ D T VGA+N+R+L A+ +GFE IHGLVDR+M L+++ P +Y S + EE+ + ++ Y I +P + A YFPGR A V+L + K K ++VGTFG+LHP VLK +DI +P+S++EIDLE L+
Sbjct: 1 MPTVALEKDQLFTHLGRTYTDDEFDELCFEFGVELDEITSEREEAEKSSTVKLSKQQIAELSENVIYKIDIPANRYDLLCVEGLCRGLRIFLGDQDAPEYTIVEGEGAGGSATVTVIKTNTDTIRPFVVAAILKDVVFTPERYASFIDLQDQLHRNLCRQRTLVAIGTHDLDTVEGPFVYDARPPTEIEFVPLTPDDRGAFNAKDLMEYYETEVAVKHLKPYVPIIKNSPLYPVIVDSQNRVLSLPPIINGTHSKITLDTKNVFIECTATDLTKANIVLDTVVTMFSEYCAKPFTVVPVKVDYQDDSGNIVDSYVSPMLSKRRETAKIDFCNSLIGINLSPTEIQNLCNKVQLGPAQL-LENDTILEVTVPPTRSDILHAVDIAEDIAIAYGYNNIVKRVPKTNTVGGAEPLNQVGDLLREEIGRAGYTEVLTHGLCSIHDNFTALQCPVREDWAVSLSNPANIEYQVVRTTLLPGLLKTFQHNKSASFAQGFKLFEISDAVVIDRENSITDTIVGARNVRKLCAAYAGPTSGFEIIHGLVDRIMTLMEVAPEASYVATSGKKSSATGGADEEKYRISREGWYYTIAELPYNGNAHESKMYFPGRAAQVLLTKPSHKEK-IRVGTFGILHPLVLKNFDIQYPSSVVEIDLEELM 652
BLAST of EWM28153.1 vs. NCBI_GenBank
Match: gi|219119420|ref|XP_002180471.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217407944|gb|EEC47879.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 680.633 bits (1755), Expect = 0.000e+0 Identity = 358/643 (55.68%), Postives = 452/643 (70.30%), Query Frame = 0
Query: 1 MPTISLVRDDLFNALGKSYTDDEFQDVCFAFGIELDEITTEGELASKDAG---SKGKCGPDGGAVVYKVDVPANRYDILCMEGLTRALRIFLELDKAPSYRKVEPTDNGGTRTVMSV-EASTASVRPFVACAILRDMTFDPLVYKSFIDLQEHLHRNICRRRTLVAIGTHDLDTLRGPFRYTAADPASIQFSPLTSDDGRVFNAKELLDFYRTDESAKHLSPYTDIIYEAPRYPVLYDSRGTVLSLPPVINGRHSRITLQTRNVFIECTATDKTKANIVLDTVVTMFSQHCARPFTVEPVDVVYEGPE--LSVETTPLLSTRKVAAKMSEIEGLVGRDLGPELVCQLCNKMQLGPASYHAETDTVV-VTVPPTRSDVLHAVDVIEDVAIAFGYNNLPIKVPGTLTVGAPLPINAFSDLLRDEIARAGYLEVLTHGLCSRAENFAKLRRPETKAVSLSNPANEEYEIVRTTLLPGLLKVLQHNRAAQVKDGLRFFEISDVVLRDD-----HTDVGAKNIRRLVASSTSMVAGFESIHGLVDRVMLLVQIGPTEAYAGNSMRG-EERMAVLKDKIQYYI--VPSDDP---AYFPGRCADVILVEDGKKSKPLKVGTFGVLHPEVLKAYDIPFPTSMLEIDLEPLI 625
MPT+S+ +D LF LG++YTD EF ++CF FG+ELDE+T+E E A K A SK + A+VYK+DVPANRYD+LC+EGL+RAL+IFL AP YR+++ + R M+V +A T +RPFV CAILR++TFD Y SFIDLQ+ LHRN+CR+RTLVAIGTHD+D ++GPF Y A P I F PLT +D + + A ELL+FY T+ +AKHL PY II ++P YPV+ DS TVLSLPP+ING S+ITL T+NVFIECTATD TKANIVLDT+VTMFS +C PFTVEPV V Y+ + +S TP+LS+R+ AK+ L+G + P+ + LCNK+QLGPA E DTV+ VTVPPTRSD+LH VD+ ED+ IA+GYNN+ +VP T TVG P+N DLLR+EI RAGY+EVLTHGLCS +NF L+RP T AV LSNPAN EY++VRTTLLPGLLK LQHN++A G + FEISDVVL D T VGAKN RRL A +GFE IHGLVDRVM L++I P EAY NS + EE V ++ Y I + DP YFPGR A ++L + S + VGTFG+LHP+VL +DI +P+S +E+DLE L+
Sbjct: 1 MPTLSVEKDLLFRHLGRTYTDKEFDELCFEFGVELDEVTSEVEEAQKSATVKLSKSQLESLSAAIVYKIDVPANRYDLLCVEGLSRALQIFLGDVDAPEYRRLDGVSDAAQRVTMTVHKAHTDQIRPFVVCAILRNVTFDEERYASFIDLQDQLHRNLCRQRTLVAIGTHDMDVVQGPFFYDARAPTDISFVPLTPND-KSYVANELLEFYETEPAAKHLKPYVPIIKDSPLYPVIVDSNETVLSLPPIINGSKSKITLDTKNVFIECTATDLTKANIVLDTMVTMFSGYCEVPFTVEPVLVQYQENDKIVSSYVTPVLSSRQETAKVDFCNSLIGIQITPQEMQALCNKVQLGPAQL-LENDTVLQVTVPPTRSDILHPVDIAEDIGIAYGYNNIRRRVPTTNTVGGEFPLNQTGDLLREEIGRAGYVEVLTHGLCSVRDNFTALQRPVTAAVKLSNPANVEYQVVRTTLLPGLLKTLQHNKSASFTGGFKLFEISDVVLPDSENVMTETIVGAKNSRRLAAVYAGPTSGFEIIHGLVDRVMTLLEIAPEEAYIANSAKSDEEEYRVAREGWTYTIASLSESDPHVNTYFPGRAAAILLTKPNATSSCV-VGTFGILHPDVLANFDILYPSSCVELDLEALM 640
BLAST of EWM28153.1 vs. NCBI_GenBank
Match: gi|397610622|gb|EJK60932.1| (hypothetical protein THAOC_18650 [Thalassiosira oceanica]) HSP 1 Score: 675.626 bits (1742), Expect = 0.000e+0 Identity = 352/642 (54.83%), Postives = 448/642 (69.78%), Query Frame = 0
Query: 1 MPTISLVRDDLFNALGKSYTDDEFQDVCFAFGIELDEITTEGELASKDAG---SKGKCGPDGGAVVYKVDVPANRYDILCMEGLTRALRIFLELDKAPSYRKVEPTDNGGTRTVMSVEASTASVRPFVACAILRDMTFDPLVYKSFIDLQEHLHRNICRRRTLVAIGTHDLDTLRGPFRYTAADPASIQFSPLT-SDDGRVFNAKELLDFYRTDESAKHLSPYTDIIYEAPRYPVLYDSRGTVLSLPPVINGRHSRITLQTRNVFIECTATDKTKANIVLDTVVTMFSQHCARPFTVEPVDVVY---EGPELSVETTPLLSTRKVAAKMSEIEGLVGRDLGPELVCQLCNKMQLGPASY----HAETDTVVVTVPPTRSDVLHAVDVIEDVAIAFGYNNLPIKVPGTLTVGAPLPINAFSDLLRDEIARAGYLEVLTHGLCSRAENFAKLRRPETKAVSLSNPANEEYEIVRTTLLPGLLKVLQHNRAAQVKDGLRFFEISDVVLRD-----DHTDVGAKNIRRLVASSTSMVAGFESIHGLVDRVMLLVQIGPTEAYAGNSMRGEERMAVLKDKIQYYIVP-SDDPAYFPGRCADVILVEDGKKSKPLKVGTFGVLHPEVLKAYDIPFPTSMLEIDLEPLI 625
MPT+S+ RD LF LG++YTDDEF ++CF FG+ELDE+T+E E A+K SK + VVYK+DVPANRYD+LC+EG++R+L++FL APSY +EP+ + T+ V+A+ +VRP+V CA+LRD+TFDP Y+SFI+LQ+ LHRN+CR+RTLVAIGTHDLD++RGPF Y A P I+F PLT +D+GR F+ +EL++ Y T+ + KHL PY II ++P YPV+ DS GTVLSLPP+ING SRITL T+NVFIECTATD TKANIVLDTVV MFS++ ARPFTVEPV V Y G TP + TRK AK+ + L+G + + LCN++QLGPA D + VTVPPTRSD+LHAVDV EDV IA GYNN+ VPGT TVG P+N DLLRDEI RAGY EVLTHGLCS A+NF L RP T AV LSNPAN EYE+VRTTLLPGLLK LQHN++ G + FEISDVVL D T VGA+N RR+ A+ T +GFE IHGLVDR+M L ++ P Y +S + + K+ +Y I D +YFPGR A+V+L G +P G+FG+LHP+VL+A+D+ +PTS +E++LE L+
Sbjct: 1 MPTVSVGRDALFAHLGRTYTDDEFDELCFEFGVELDEVTSEREEATKSETVKLSKDQIAALSDEVVYKIDVPANRYDLLCIEGISRSLKVFLGDMDAPSYEVLEPSHEASS-TMTVVQANVDTVRPYVVCAVLRDVTFDPERYQSFIELQDQLHRNLCRQRTLVAIGTHDLDSVRGPFTYDARAPGEIKFVPLTHTDEGREFDGRELMEHYETEPACKHLKPYVPIIKDSPLYPVVLDSEGTVLSLPPIINGSKSRITLDTKNVFIECTATDLTKANIVLDTVVAMFSEYAARPFTVEPVTVSYVDAAGGVARSYVTPQMYTRKETAKVDFVNSLIGISVESSKMADLCNRIQLGPARIIPDGQTGEDVLEVTVPPTRSDILHAVDVAEDVGIAHGYNNIVRTVPGTCTVGREQPLNQLGDLLRDEIGRAGYTEVLTHGLCSTADNFTALGRPVTAAVKLSNPANVEYEVVRTTLLPGLLKTLQHNKSMSFAGGFKLFEISDVVLPDSECVVSETVVGARNSRRVCATFTGPSSGFEIIHGLVDRIMTLCEVAPEAGYVASSGSAYKSV-YCKEGWEYTIRELRGDGSYFPGRGAEVLLKRPGGDFEP--AGSFGILHPDVLRAFDVLYPTSAVELNLEKLL 638
BLAST of EWM28153.1 vs. NCBI_GenBank
Match: gi|1173945062|gb|OQR93734.1| (phenylalanyl-tRNA synthetase beta chain [Achlya hypogyna]) HSP 1 Score: 671.774 bits (1732), Expect = 0.000e+0 Identity = 341/635 (53.70%), Postives = 454/635 (71.50%), Query Frame = 0
Query: 1 MPTISLVRDDLFNALGKSYTDDEFQDVCFAFGIELDEITTEGELASKDAGSKGKCGPDGGAVVYKVDVPANRYDILCMEGLTRALRIFLELDKAPSYRKVEPTDNGGTRTVMSVEASTA--SVRPFVACAILRDMTFDPLVYKSFIDLQEHLHRNICRRRTLVAIGTHDLDTLRGPFRYTAADPASIQFSPLTSDDGRVFNAKELLDFYRTDESAKHLSPYTDIIYEAPRYPVLYDSRGTVLSLPPVINGRHSRITLQTRNVFIECTATDKTKANIVLDTVVTMFSQHCARPFTVEPVDVVYEGPELSVETTPLLSTRKVAAKMSEIEGLVGR-----DLGPELVCQLCNKMQLGPASYHAETDTVVVTVPPTRSDVLHAVDVIEDVAIAFGYNNLPIKVPGTLTVGAPLPINAFSDLLRDEIARAGYLEVLTHGLCSRAENFAKLRRPE--TKAVSLSNPANEEYEIVRTTLLPGLLKVLQHNRAAQVKDGLRFFEISDVVLRDDHTDVGAKNIRRLVASSTSMVAGFESIHGLVDRVMLLVQIGPTEAYAGNSMRGEERMAVLKDKIQYY-IVPSDDPAYFPGRCADVILVEDGKKSKPLKVGTFGVLHPEVLKAYDIPFPTSMLEIDLEPLI 625
MPT+ + RD+LF A+G+ +TD++F +CF FGIELDEIT+E ++ K+ G+K G D +V+YK+DVPANRYD+LC+EG+ RALR+F++ + P +R V P T+ V++V+ + ++RP+V ILRD+TF Y SFIDLQ+ LH+NICRRRTLVAIGTHD DT+ GPF Y P SI+F PL+ R FNA+ELLD YRT+ KHL PYTDIIY+ P YP++YD TVLSLPP+IN HS+I L T+NVFIECTATD TKAN+VL+T++ MFSQ+CA PFTVEPV VVYE + E TP +S R+V K+ +I+ ++ DL E +C+LC KMQL A+Y E+ ++ V VPPTRSD+LH VDV+EDV IA+GY+N+P+ P TLT+G PIN D LRDEI+RAGY+E+LTHGLCS ENF L + + AV L+NPA E+E+VRTT++PG+LK + +N++ +KDGL+ FEISDVVL DD +DVGAKN+RRL A T GFE IHGLVDRVM LV IG + + DK +Y +VPS +P +FPGRCAD++L +G K +K+G+FGVLHP VL+ Y++ +P S++E+D+EPL+
Sbjct: 1 MPTVGVKRDELFAAIGQVFTDEQFDHLCFEFGIELDEITSERQMKEKEQGAKAASGADD-SVIYKIDVPANRYDLLCVEGIARALRVFMKKELPPVFRVVAPK---TTQQVITVKKNQGLETMRPYVVSCILRDVTFTEERYASFIDLQDKLHQNICRRRTLVAIGTHDFDTIEGPFTYEGQAPESIRFVPLSL--TREFNARELLDQYRTNPDFKHLKPYTDIIYDFPTYPIIYDKNRTVLSLPPIINSEHSKIKLSTKNVFIECTATDITKANVVLNTMIAMFSQYCAAPFTVEPVQVVYEA-DGHKELTPNMSNREVVTKVKDIQSMLFGTKEPIDLDVERICELCVKMQL-EATYLKESHSIKVQVPPTRSDILHPVDVMEDVGIAYGYDNIPMTHPPTLTIGRAQPINKLGDALRDEISRAGYIELLTHGLCSHDENFKFLNQKDDGKSAVVLANPATIEFEVVRTTMIPGVLKTVLNNKSMSLKDGLKLFEISDVVLLDDASDVGAKNVRRLCALYTGQTDGFEVIHGLVDRVMQLVGIGCS-------------LESHHDKDLFYTVVPSQNPTFFPGRCADIVLTRNGDK---IKLGSFGVLHPVVLEHYELLYPCSVVEMDVEPLV 611
BLAST of EWM28153.1 vs. NCBI_GenBank
Match: gi|675191437|ref|XP_008904603.1| (phenylalanine-tRNA ligase, beta subunit [Phytophthora parasitica INRA-310] >gi|568095398|gb|ETN10166.1| phenylalanine-tRNA ligase, beta subunit [Phytophthora parasitica INRA-310] >gi|570986938|gb|ETP45840.1| phenylalanine-tRNA ligase, beta subunit [Phytophthora parasitica P10297]) HSP 1 Score: 669.848 bits (1727), Expect = 0.000e+0 Identity = 346/635 (54.49%), Postives = 451/635 (71.02%), Query Frame = 0
Query: 1 MPTISLVRDDLFNALGKSYTDDEFQDVCFAFGIELDEITTEGELASKDAGSKGKCGPD-GGAVVYKVDVPANRYDILCMEGLTRALRIFLELDKAPSYRKVEPTDNGGTRTVMSVEASTASVRPFVACAILRDMTFDPLVYKSFIDLQEHLHRNICRRRTLVAIGTHDLDTLRGPFRYTAADPASIQFSPLTSDDGRVFNAKELLDFYRTDESAKHLSPYTDIIYEAPRYPVLYDSRGTVLSLPPVINGRHSRITLQTRNVFIECTATDKTKANIVLDTVVTMFSQHCARPFTVEPVDVVYEGPELSV-ETTPLLSTRKVAAKMSEIEG-LVGR----DLGPELVCQLCNKMQLGPASYHAETDTVVVTVPPTRSDVLHAVDVIEDVAIAFGYNNLPIKVPGTLTVGAPLPINAFSDLLRDEIARAGYLEVLTHGLCSRAENFAKLRRPET--KAVSLSNPANEEYEIVRTTLLPGLLKVLQHNRAAQVKDGLRFFEISDVVLRDDHTDVGAKNIRRLVASSTSMVAGFESIHGLVDRVMLLVQI-GPTEAYAGNSMRGEERMAVLKDKIQYYIVPSDDPAYFPGRCADVILVEDGKKSKPLKVGTFGVLHPEVLKAYDIPFPTSMLEIDLEPLI 625
MPT+ + RD+LF ALG++YTD+EF +CF FGIELD++T+E +L ++ +GK + AV+YK+DVPANRYD+LC+EG+ RALRIFLE ++ P Y + P G ++V+ +T VRP+V AILRD+ F Y SFIDLQ+ LH+NICRRRTLVAIGTHDLDT+ GPF Y A P I+F PLT + F AKELLDFYRT+ KH+ PYTDIIY++P YPV+ D G VLSLPP+ING HS+I+L T+NVFIECTATD TKA +VL+T++ MFS++CA+PFTVEPV + YE ++ E TP LS R V ++ I L G+ +L E +C+LC+KMQL A T++ VP TRSD+LH VDVIEDV IA+G+NN+P+ +P T T+G P+N DLLRDEI+RAGY+E+LTHGLCS ENF L R + AV LSNPA E+E+VRT++LPG+LK +Q+N+A +K+GL+ FEISDVV+ DD+TDVGAKN+RR+ A+ T GFE IHGLVDR+M L+ I E AG K Y I P+++ YFPGRCA V L ++ +KPL++GTFGVLHPEVLK +D+ PTS+LE+DLEPL+
Sbjct: 1 MPTVGVKRDELFAALGQTYTDEEFDVLCFEFGIELDDVTSEKQLKQRETKGQGKDHSEHSDAVLYKIDVPANRYDLLCVEGIARALRIFLEKERPPVY-TLTPRAEGPHS--ITVKPNTKLVRPYVVSAILRDVKFTQERYDSFIDLQDKLHQNICRRRTLVAIGTHDLDTVEGPFTYNALPPNEIKFIPLTQ--SKEFEAKELLDFYRTNPEVKHIKPYTDIIYDSPVYPVITDKNGVVLSLPPIINGEHSKISLATKNVFIECTATDITKAKVVLNTMIAMFSEYCAKPFTVEPVQINYEDQTVNENELTPNLSKRSVEVQIKNIYSMLFGKSEPINLDVERICKLCDKMQLD-AKPSGNGKTIIAEVPITRSDILHPVDVIEDVGIAYGFNNIPLTIPQTQTIGMAQPLNKLGDLLRDEISRAGYIELLTHGLCSHKENFEYLNREDDGHSAVVLSNPATVEFEVVRTSMLPGVLKTIQNNKAMSIKEGLKLFEISDVVVIDDNTDVGAKNVRRICAAYTGPTDGFEVIHGLVDRIMQLMGIPSALEMAAGT-------------KEYYTITPAEERTYFPGRCAYVTLQKE--DAKPLRLGTFGVLHPEVLKNFDLLNPTSVLEMDLEPLV 614
BLAST of EWM28153.1 vs. NCBI_GenBank
Match: gi|566025096|gb|ETI48007.1| (phenylalanine-tRNA ligase, beta subunit [Phytophthora parasitica P1569] >gi|566025123|gb|ETI48034.1| phenylalanine-tRNA ligase, beta subunit [Phytophthora parasitica P1569] >gi|567962411|gb|ETK87936.1| phenylalanine-tRNA ligase, beta subunit [Phytophthora parasitica] >gi|567991140|gb|ETL41355.1| phenylalanine-tRNA ligase, beta subunit [Phytophthora parasitica] >gi|568020401|gb|ETL94531.1| phenylalanine-tRNA ligase, beta subunit [Phytophthora parasitica] >gi|568050812|gb|ETM47742.1| phenylalanine-tRNA ligase, beta subunit [Phytophthora parasitica] >gi|570328771|gb|ETO76719.1| phenylalanine-tRNA ligase, beta subunit [Phytophthora parasitica P1976] >gi|570952586|gb|ETP17843.1| phenylalanine-tRNA ligase, beta subunit [Phytophthora parasitica CJ01A1]) HSP 1 Score: 669.463 bits (1726), Expect = 0.000e+0 Identity = 346/635 (54.49%), Postives = 451/635 (71.02%), Query Frame = 0
Query: 1 MPTISLVRDDLFNALGKSYTDDEFQDVCFAFGIELDEITTEGELASKDAGSKGKCGPD-GGAVVYKVDVPANRYDILCMEGLTRALRIFLELDKAPSYRKVEPTDNGGTRTVMSVEASTASVRPFVACAILRDMTFDPLVYKSFIDLQEHLHRNICRRRTLVAIGTHDLDTLRGPFRYTAADPASIQFSPLTSDDGRVFNAKELLDFYRTDESAKHLSPYTDIIYEAPRYPVLYDSRGTVLSLPPVINGRHSRITLQTRNVFIECTATDKTKANIVLDTVVTMFSQHCARPFTVEPVDVVYEGPELSV-ETTPLLSTRKVAAKMSEIEG-LVGR----DLGPELVCQLCNKMQLGPASYHAETDTVVVTVPPTRSDVLHAVDVIEDVAIAFGYNNLPIKVPGTLTVGAPLPINAFSDLLRDEIARAGYLEVLTHGLCSRAENFAKLRRPET--KAVSLSNPANEEYEIVRTTLLPGLLKVLQHNRAAQVKDGLRFFEISDVVLRDDHTDVGAKNIRRLVASSTSMVAGFESIHGLVDRVMLLVQI-GPTEAYAGNSMRGEERMAVLKDKIQYYIVPSDDPAYFPGRCADVILVEDGKKSKPLKVGTFGVLHPEVLKAYDIPFPTSMLEIDLEPLI 625
MPT+ + RD+LF ALG++YTD+EF +CF FGIELD++T+E +L ++ +GK + AV+YK+DVPANRYD+LC+EG+ RALRIFLE ++ P Y + P G ++V+ +T VRP+V AILRD+ F Y SFIDLQ+ LH+NICRRRTLVAIGTHDLDT+ GPF Y A P I+F PLT + F AKELLDFYRT+ KH+ PYTDIIY++P YPV+ D G VLSLPP+ING HS+I+L T+NVFIECTATD TKA +VL+T++ MFS++CA+PFTVEPV + YE ++ E TP LS R V ++ I L G+ +L E +C+LC+KMQL A T++ VP TRSD+LH VDVIEDV IA+G+NN+P+ +P T T+G P+N DLLRDEI+RAGY+E+LTHGLCS ENF L R + AV LSNPA E+E+VRT++LPG+LK +Q+N+A +K+GL+ FEISDVV+ DD+TDVGAKN+RR+ A+ T GFE IHGLVDR+M L+ I E AG K Y I P+++ YFPGRCA V L ++ +KPL++GTFGVLHPEVLK +D+ PTS+LE+DLEPL+
Sbjct: 1 MPTVGVKRDELFAALGQTYTDEEFDVLCFEFGIELDDVTSEKQLKQRETKGQGKDHSEHSDAVLYKIDVPANRYDLLCVEGIARALRIFLEKERPPVY-TLTPRAEGPHS--ITVKPNTKLVRPYVVSAILRDVKFTQERYDSFIDLQDKLHQNICRRRTLVAIGTHDLDTVEGPFTYNALPPNEIKFIPLTQ--SKEFEAKELLDFYRTNPEVKHIKPYTDIIYDSPVYPVITDKNGVVLSLPPIINGEHSKISLATKNVFIECTATDITKAKVVLNTMIAMFSEYCAKPFTVEPVQINYEDQTVNENELTPNLSKRSVEVQIKNIYSMLFGKGEPINLDVERICKLCDKMQLD-AKPSGNGKTIIAEVPITRSDILHPVDVIEDVGIAYGFNNIPLTIPQTQTIGMAQPLNKLGDLLRDEISRAGYIELLTHGLCSHKENFEYLNREDDGHSAVVLSNPATVEFEVVRTSMLPGVLKTIQNNKAMSIKEGLKLFEISDVVVIDDNTDVGAKNVRRICAAYTGPTDGFEVIHGLVDRIMQLMGIPSALEMAAGT-------------KEYYTITPAEERTYFPGRCAYVTLQKE--DAKPLRLGTFGVLHPEVLKNFDLLNPTSVLEMDLEPLV 614
BLAST of EWM28153.1 vs. NCBI_GenBank
Match: gi|695427638|ref|XP_009529748.1| (hypothetical protein PHYSODRAFT_545525 [Phytophthora sojae] >gi|348676181|gb|EGZ15999.1| hypothetical protein PHYSODRAFT_545525 [Phytophthora sojae]) HSP 1 Score: 669.078 bits (1725), Expect = 0.000e+0 Identity = 343/635 (54.02%), Postives = 452/635 (71.18%), Query Frame = 0
Query: 1 MPTISLVRDDLFNALGKSYTDDEFQDVCFAFGIELDEITTEGELASKDAGSKGK-CGPDGGAVVYKVDVPANRYDILCMEGLTRALRIFLELDKAPSYRKVEPTDNGGTRTVMSVEASTASVRPFVACAILRDMTFDPLVYKSFIDLQEHLHRNICRRRTLVAIGTHDLDTLRGPFRYTAADPASIQFSPLTSDDGRVFNAKELLDFYRTDESAKHLSPYTDIIYEAPRYPVLYDSRGTVLSLPPVINGRHSRITLQTRNVFIECTATDKTKANIVLDTVVTMFSQHCARPFTVEPVDVVYEGPELSV-ETTPLLSTRKVAAKMSEIEG-LVGR----DLGPELVCQLCNKMQLGPASYHAETDTVVVTVPPTRSDVLHAVDVIEDVAIAFGYNNLPIKVPGTLTVGAPLPINAFSDLLRDEIARAGYLEVLTHGLCSRAENFAKLRRPET--KAVSLSNPANEEYEIVRTTLLPGLLKVLQHNRAAQVKDGLRFFEISDVVLRDDHTDVGAKNIRRLVASSTSMVAGFESIHGLVDRVMLLVQI-GPTEAYAGNSMRGEERMAVLKDKIQYYIVPSDDPAYFPGRCADVILVEDGKKSKPLKVGTFGVLHPEVLKAYDIPFPTSMLEIDLEPLI 625
MPT+ + RD+LF A+G++YTD+EF +CF FGIELD+IT+E +L ++ + K AV+YK+DVPANRYD+LC+EG+ RALRIFLE ++ P Y + P G ++V+ +T VRPFV A+LRD+ F Y SFIDLQ+ LH+NICRRRTLVAIGTHDLDT++GPF Y A P I+F PL+ D + F AKELLDFYRT+ KH+ PYTDIIY++P YPV+ D G VLSLPP+ING HS+I+L T+NVFIECTATD TKA +VL+T++ MFS++CA+PFTVEPV V+YE ++ E TP LS R V ++ I L G+ DL + +C+LCNKMQL A T++ VP TRSD+LH VDVIEDV IA+G+NN+P+ +P T T+G P+N DLLRDEI+RAGY+E+LTHGLCS ENF L R + AV L+NPA E+E+VRT++LPG+LK +Q+N+A +K+GL+ FEISDVV+ DD+TDVGAKN+RR+ A+ T GFE IHGLVDR+M L+ I E AG K Y I P+++ YFPGRCA + L ++ ++PL++GTFGVLHP+VLK +D+ PTS+LE+DLEPL+
Sbjct: 1 MPTVGVKRDELFAAMGQTYTDEEFDVLCFEFGIELDDITSEKQLKQRETQGQDKDHSAHSDAVLYKIDVPANRYDLLCVEGIARALRIFLEKERPPVY-TLTPRAEGPHH--ITVKPNTKLVRPFVVSAVLRDVQFTQERYDSFIDLQDKLHQNICRRRTLVAIGTHDLDTIQGPFTYNALPPNEIKFKPLSQD--KEFEAKELLDFYRTNPDVKHIKPYTDIIYDSPVYPVITDKNGVVLSLPPIINGEHSKISLDTKNVFIECTATDITKAKVVLNTMIAMFSEYCAKPFTVEPVQVIYEDETVNQNELTPNLSKRSVEVQIKNIYSMLFGKGEPIDLDVDRICKLCNKMQLD-AKPSGNGKTIIAEVPITRSDILHPVDVIEDVGIAYGFNNIPLTIPHTQTIGMAQPLNKLGDLLRDEISRAGYIELLTHGLCSHKENFEYLNREDDGHSAVVLANPATVEFEVVRTSMLPGVLKTIQNNKAMSIKEGLKLFEISDVVVIDDNTDVGAKNVRRICAAYTGPTDGFEVIHGLVDRIMQLMGIPSALEMPAGT-------------KEYYTITPAEERTYFPGRCAYLTLQKE--DAEPLRLGTFGVLHPQVLKNFDLLNPTSVLEMDLEPLV 614 The following BLAST results are available for this feature:
BLAST of EWM28153.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|