EWM28167.1, cds2400 (CDS) Nannochloropsis gaditana

Overview
NameEWM28167.1
Unique Namecds2400
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:315673..315912 -
Alignment locationCM002459.1:314398..315549 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM28167.1
Productsolute carrier family 25 (mitochondrial carrier peroxisomal membrane 34kda) member 17
Orig transcript idgnl|cribi|Naga_100004g41.9098.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:315673..315912 -
CM002459.1supercontigCM002459.1:314398..315549 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR018108Mitochondrial_sb/sol_carrier
IPR023395Mt_carrier_dom
Homology
BLAST of EWM28167.1 vs. NCBI_GenBank
Match: gi|585110512|gb|EWM28167.1| (solute carrier family 25 (mitochondrial carrier peroxisomal membrane 34kda) member 17 [Nannochloropsis gaditana])

HSP 1 Score: 952.97 bits (2462), Expect = 0.000e+0
Identity = 463/463 (100.00%), Postives = 463/463 (100.00%), Query Frame = 0
Query:    1 MASREDSAGVKTCPMPVRPPQPAATSEILESNSPITVLSMPSPLRDHELRPPAAKLAVTRPALLPEGNHPVNEKSSPGEQNTATMGRESLIHALAGGLGSALALALTYPLDQVRTFQQVNDTPEDDEYINHGGSSPLLNQETCPATSLARLAFLFRPYRTASVMVQRHGAGALYRGMVPVLISMGLSNAVFFFVSNLLKAILSRYRQRTGKSLGYFGHLATGTIAGVLNVVLTTPLWVAGMRAKLSSAQGWNILTIMAKIWKDEGVMALWSGMIPSLLLVCNPVLQHFVYDVLKRRTLATRRVRSSQLSFPPSSMPIGRSEVTGAAVALTSLEAFYFGAVGKFVATIVSYPLQVAQSRLRQQSQKSETDGNNATTSKEEGKTDWERELLAQSANHYTGTLDCLLDLWRRKGVAGLFQGVESKLLQTVVTSAFMFLAYENIFKVTKGVLDVTDRKGLGGKLHNE 463
            MASREDSAGVKTCPMPVRPPQPAATSEILESNSPITVLSMPSPLRDHELRPPAAKLAVTRPALLPEGNHPVNEKSSPGEQNTATMGRESLIHALAGGLGSALALALTYPLDQVRTFQQVNDTPEDDEYINHGGSSPLLNQETCPATSLARLAFLFRPYRTASVMVQRHGAGALYRGMVPVLISMGLSNAVFFFVSNLLKAILSRYRQRTGKSLGYFGHLATGTIAGVLNVVLTTPLWVAGMRAKLSSAQGWNILTIMAKIWKDEGVMALWSGMIPSLLLVCNPVLQHFVYDVLKRRTLATRRVRSSQLSFPPSSMPIGRSEVTGAAVALTSLEAFYFGAVGKFVATIVSYPLQVAQSRLRQQSQKSETDGNNATTSKEEGKTDWERELLAQSANHYTGTLDCLLDLWRRKGVAGLFQGVESKLLQTVVTSAFMFLAYENIFKVTKGVLDVTDRKGLGGKLHNE
Sbjct:    1 MASREDSAGVKTCPMPVRPPQPAATSEILESNSPITVLSMPSPLRDHELRPPAAKLAVTRPALLPEGNHPVNEKSSPGEQNTATMGRESLIHALAGGLGSALALALTYPLDQVRTFQQVNDTPEDDEYINHGGSSPLLNQETCPATSLARLAFLFRPYRTASVMVQRHGAGALYRGMVPVLISMGLSNAVFFFVSNLLKAILSRYRQRTGKSLGYFGHLATGTIAGVLNVVLTTPLWVAGMRAKLSSAQGWNILTIMAKIWKDEGVMALWSGMIPSLLLVCNPVLQHFVYDVLKRRTLATRRVRSSQLSFPPSSMPIGRSEVTGAAVALTSLEAFYFGAVGKFVATIVSYPLQVAQSRLRQQSQKSETDGNNATTSKEEGKTDWERELLAQSANHYTGTLDCLLDLWRRKGVAGLFQGVESKLLQTVVTSAFMFLAYENIFKVTKGVLDVTDRKGLGGKLHNE 463          
BLAST of EWM28167.1 vs. NCBI_GenBank
Match: gi|291241258|ref|XP_002740530.1| (PREDICTED: peroxisomal membrane protein PMP34-like [Saccoglossus kowalevskii])

HSP 1 Score: 189.119 bits (479), Expect = 1.145e-52
Identity = 134/369 (36.31%), Postives = 180/369 (48.78%), Query Frame = 0
Query:   88 ESLIHALAGGLGSALALALTYPLDQVRTFQQVNDTPEDDEYINHGGSSPLLNQETCPATSLARLAFLFRPYRTASVMVQRHGAGALYRGMVPVLISMGLSNAVFFFVSNLLKAILSRY---RQRTGKSLGYFGHLATGTIAGVLNVVLTTPLWVAGMRAKLSSAQ------------GWN-ILTIMAKIWKDEGVMALWSGMIPSLLLVCNPVLQHFVYDVLKRRTLATRRVRSSQLSFPPSSMPIGRSEVTGAAVALTSLEAFYFGAVGKFVATIVSYPLQVAQSRLRQQSQKSETDGNNATTSKEEGKTDWERELLAQSANHYTGTLDCLLDLWRRKGVAGLFQGVESKLLQTVVTSAFMFLAYENI 440
            ++L+HA+AG  GSA+++ + YPLD  R   Q++D  +                                P   A +  Q  G  +LY+G++PVL S+  SN V+F+  N LK  LS Y   R  TG     F  LA G IAGV NV++TTPLWVA  R KL   +             +N ++  + KI+KDEG+  LWSG  PSL+LV NP +Q  VY+ LKR                 S +P+      G    L+SL  F  GAV K VATI +YPLQV QSRLR    K            E GK                G L  ++DL + +G+ G+F+G+E+KLLQTV+ +A MFL YE I
Sbjct:   16 DNLVHAVAGATGSAVSMTVFYPLDAARVRLQIDDKRKAKH----------------------------TPQVIADI-AQEEGISSLYKGLLPVLQSLCCSNFVYFYTYNGLK--LSYYGATRTPTG-----FSDLAIGFIAGVTNVLITTPLWVANTRLKLQGVRLKSNADKEVKHPRYNGMIDALCKIYKDEGINILWSGTFPSLMLVANPSIQFAVYEALKR-----------------SQLPLA-----GTGNELSSLTIFLMGAVAKAVATIATYPLQVIQSRLRYHGNKG-----------ENGKK--------------MGFLAMVMDLVKTRGLRGMFKGLEAKLLQTVLMAALMFLTYEKI 301          
BLAST of EWM28167.1 vs. NCBI_GenBank
Match: gi|298707589|emb|CBJ30168.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 188.348 bits (477), Expect = 1.901e-51
Identity = 134/392 (34.18%), Postives = 195/392 (49.74%), Query Frame = 0
Query:  104 LALTYPLDQVRTFQQVNDTPEDDEYINHGGSSPLLNQETCPATSLARLAFLFRPYRTASVMVQRHGAGALYRGMVPVLISMGLSNAVFFFVSNLLKA-ILSRYRQRTGKSLGYFG---------------------HLATGTIAGVLNVVLTTPLWVAGMRAKLSSAQGWNILTIMAKIWKDEGVMALWSGMIPSLLLVCNPVLQHFVYDVLKR--------RTLATRRVRSSQLSFPPSSMPIGRSEVTGA----AVALTSLEAFYFGAVGKFVATIVSYPLQVAQSRLRQ----------QSQKSETDGNNATTSKEEGKTDWERELLAQSANHYTGTLDCLLDLWRRKGVAGLFQGVESKLLQTVVTSAFMFLAYENIFKVTKGVLDVT 451
            +AL YPLDQVR   QV+D                L +E         L  L R       +V+RHG   L+RGMVPVLI+MG+SN V+F+    +KA +LSR R    + +   G                      +   TIAGV+NV+ TTPLWV+ +R K  +  G  + + +  I + EG+  LWSG  PSL+LV NP++Q  VY+ LK+        R    RR+    ++ PP           G     +V L S EAF  GA  K ++T+V+YPLQ+AQ++LR           Q Q +E D +++      G   +   +  Q    ++GT+D L+ + RR GV G++QG+ +KLL TV+TSA +FL YE + +V    +  T
Sbjct:    1 MALLYPLDQVRAILQVDDD---------------LAKECSAPGGAGVLGALSR-------LVRRHGRAGLWRGMVPVLITMGVSNFVYFYCFTGMKAALLSRRRVLRARGVRAGGAAKPLAGGARGEGGGGLTPLESVVASTIAGVINVLATTPLWVSNLRIKAGNGVG-GLFSTLGSIGRHEGLAGLWSGTAPSLVLVSNPIIQFVVYETLKQALGRRHSHRNGEARRI----ITQPPDPRSAAGGGSRGGAGRPSVGLRSHEAFLLGATAKTISTLVTYPLQLAQAKLRAGRAARGGGTWQGQCNEQDDSSSPGGARGG---FRSGVAWQLLTCWSGTVDVLVSVCRRNGVGGMYQGMRAKLLHTVLTSALLFLGYERLLEVIANSMAAT 362          
BLAST of EWM28167.1 vs. NCBI_GenBank
Match: gi|557778864|ref|XP_005189059.1| (PREDICTED: peroxisomal membrane protein PMP34 [Musca domestica])

HSP 1 Score: 181.03 bits (458), Expect = 1.869e-49
Identity = 120/362 (33.15%), Postives = 187/362 (51.66%), Query Frame = 0
Query:   88 ESLIHALAGGLGSALALALTYPLDQVRTFQQVNDTPEDDEYINHGGSSPLLNQETCPATSLARLAFLFRPYRTASVMVQRHGAGALYRGMVPVLISMGLSNAVFFFVSNLLKAILSRYRQRTGKSLGYFGHLATGTIAGVLNVVLTTPLWVAGMRAKLSSAQGWN---------ILTIMAKIWKDEGVMALWSGMIPSLLLVCNPVLQHFVYDVLKRRTLATRRVRSSQLSFPPSSMPIGRSEVTGAAVALTSLEAFYFGAVGKFVATIVSYPLQVAQSRLRQQSQKSETDGNNATTSKEEGKTDWERELLAQSANHYTGTLDCLLDLWRRKGVAGLFQGVESKLLQTVVTSAFMFLAYENI 440
            +S +HA++G  G  +A++  YPLD VR+  Q+ D  ++ E                     AR        +    +V   G  +LYRG+ PVL S+ +SN V+F+  + LKAI S   ++   +   F  L  G +AG++NV  TTP WV   R ++    G +         +L+ +  + K EGV  LWSG IPSL+LV NP LQ  +Y++LKR  +  +  RSS++S                     SL  F  GA+ K  AT+++YPLQ+ Q++ R ++++     N A+TSK              +A    G +  +LD+++ +GV GLF+G+E+K+LQTV+T+A MF+AYE I
Sbjct:   14 DSWVHAMSGAAGGCIAMSTFYPLDTVRSRLQLEDPEKNGE---------------------AR-----STMQVIKEIVLGEGFQSLYRGLGPVLQSLCISNFVYFYAFHCLKAISSGGDKKQQNA---FKDLMLGAVAGIINVFSTTPFWVVNTRLRMRDVAGTSDEVNKYYKSLLSGLRYVAKTEGVKGLWSGTIPSLILVSNPSLQFMMYELLKRNYI--KYNRSSEIS---------------------SLGYFVIGAIAKAFATVMTYPLQLVQTKQRHRTKEQ----NGASTSKHA------------AAQKDVGVIKMMLDIFQHQGVKGLFRGMEAKILQTVLTAALMFMAYEKI 307          
BLAST of EWM28167.1 vs. NCBI_GenBank
Match: gi|617443005|ref|XP_007565795.1| (PREDICTED: peroxisomal membrane protein PMP34 isoform X1 [Poecilia formosa])

HSP 1 Score: 179.874 bits (455), Expect = 2.939e-49
Identity = 134/375 (35.73%), Postives = 184/375 (49.07%), Query Frame = 0
Query:   88 ESLIHALAGGLGSALALALTYPLDQVRTFQQVNDTPEDDEYINHGGSSPLLNQETCPATSLARLAFLFRPYRTASVMVQRHGAGALYRGMVPVLISMGLSNAVFFFVSNLLKAILSRYRQRTGKSLGYFGHLATGTIAGVLNVVLTTPLWVAGMRAKLSSAQGWN----------ILTIMAKIWKDEGVMALWSGMIPSLLLVCNPVLQHFVYDVLKRRTLATRRVRSSQLSFPPSSMPIGRSEVTGAAVALTSLEAFYFGAVGKFVATIVSYPLQVAQSRLRQQSQKSETDGNNATTSKEEGKTDWERELLAQSANHYTGTLDCLLDLWRRKGVAGLFQGVESKLLQTVVTSAFMFLAYENIFKVTKGVLDVTD 452
            ESL+HA++G +GS  A+ + +PLD  R   QV++            S+P +  +                      +V+  G  A YRG  PV+ S+  SN V+F+  + +KA   + RQ T  +      L  G +AGV+NV+LTTPLWV   R KL  ++  N          IL    +I + EGV ALW+G  PSLLLV NP +Q  VY+ LKR+    RR                     GA+  L+SLEAF  GAV K VATIV+YPLQ  QS LR     + T                E+  L  S     G    L++  R+ GV+GLF+G+E+KLLQTV+T+A MFL YE I   T  V+ ++ 
Sbjct:    9 ESLVHAVSGAVGSVTAMTVFFPLDTARLRLQVDEN-------RKAKSTPAILAD----------------------IVKEEGLLAPYRGWFPVICSLCCSNFVYFYCFHWMKASWLKSRQSTPST-----DLIVGIVAGVINVLLTTPLWVVNTRLKLQGSKFHNSDIRPTNYSGILDAFKQIVRKEGVGALWNGTFPSLLLVLNPAIQFMVYEGLKRQ---LRR---------------------GASRELSSLEAFIIGAVAKAVATIVTYPLQTMQSVLRFGQVNTPT----------------EKSTLLSSLQTLQG---LLVNRARKHGVSGLFKGLEAKLLQTVLTAALMFLLYEKIASSTFRVMGLSS 306          
BLAST of EWM28167.1 vs. NCBI_GenBank
Match: gi|961832590|ref|XP_014838129.1| (PREDICTED: peroxisomal membrane protein PMP34 isoform X1 [Poecilia mexicana])

HSP 1 Score: 178.718 bits (452), Expect = 8.078e-49
Identity = 134/375 (35.73%), Postives = 183/375 (48.80%), Query Frame = 0
Query:   88 ESLIHALAGGLGSALALALTYPLDQVRTFQQVNDTPEDDEYINHGGSSPLLNQETCPATSLARLAFLFRPYRTASVMVQRHGAGALYRGMVPVLISMGLSNAVFFFVSNLLKAILSRYRQRTGKSLGYFGHLATGTIAGVLNVVLTTPLWVAGMRAKLSSAQGWN----------ILTIMAKIWKDEGVMALWSGMIPSLLLVCNPVLQHFVYDVLKRRTLATRRVRSSQLSFPPSSMPIGRSEVTGAAVALTSLEAFYFGAVGKFVATIVSYPLQVAQSRLRQQSQKSETDGNNATTSKEEGKTDWERELLAQSANHYTGTLDCLLDLWRRKGVAGLFQGVESKLLQTVVTSAFMFLAYENIFKVTKGVLDVTD 452
            ESL+HA++G +GS  A+ + +PLD  R   QV++            S+P +  +                      +V+  G  A YRG  PV+ S+  SN V+F+  + +KA   + RQ T  +      L  G +AGV+NV+LTTPLWV   R KL  ++  N          IL    +I + EGV ALW+G  PSLLLV NP +Q  VY+ LKR+    RR                     GA+  L+SLEAF  GAV K VATIV+YPLQ  QS LR     + T                E+  L  S     G    L++  R+ GV GLF+G+E+KLLQTV+T+A MFL YE I   T  V+ ++ 
Sbjct:    9 ESLVHAVSGAVGSVTAMTVFFPLDTARLRLQVDEN-------RKAKSTPAILAD----------------------IVKEEGLLAPYRGWFPVICSLCCSNFVYFYCFHWMKASWLKSRQSTPST-----DLIVGIVAGVINVLLTTPLWVVNTRLKLQGSKFHNSDIRPTNYSGILDAFKQIVRKEGVGALWNGTFPSLLLVLNPAIQFMVYEGLKRQ---LRR---------------------GASRELSSLEAFIIGAVAKAVATIVTYPLQTMQSVLRFGQVNTPT----------------EKSTLLSSLQTLQG---LLVNRARKHGVLGLFKGLEAKLLQTVLTAALMFLLYEKIASSTFRVMGLSS 306          
BLAST of EWM28167.1 vs. NCBI_GenBank
Match: gi|1108906675|ref|XP_010727424.2| (PREDICTED: peroxisomal membrane protein PMP34-like [Larimichthys crocea] >gi|808882958|gb|KKF30227.1| Peroxisomal membrane protein PMP34 [Larimichthys crocea])

HSP 1 Score: 177.948 bits (450), Expect = 1.601e-48
Identity = 129/375 (34.40%), Postives = 178/375 (47.47%), Query Frame = 0
Query:   81 NTATMGRESLIHALAGGLGSALALALTYPLDQVRTFQQVNDTPEDDEYINHGGSSPLLNQETCPATSLARLAFLFRPYRTASVMVQRHGAGALYRGMVPVLISMGLSNAVFFFVSNLLKAILSRYRQRTGKSLGYFGHLATGTIAGVLNVVLTTPLWVAGMRAKLSSAQGWN----------ILTIMAKIWKDEGVMALWSGMIPSLLLVCNPVLQHFVYDVLKRRTLATRRVRSSQLSFPPSSMPIGRSEVTGAAVALTSLEAFYFGAVGKFVATIVSYPLQVAQSRLRQQSQKSETDGNNATTSKEEGKTDWERELLAQSANHYTGTLDCLL-DLWRRKGVAGLFQGVESKLLQTVVTSAFMFLAYENIFKVT 444
            ++A    ESL+HA++G +GS  A+ + +PLD  R   QV++  +         S+P +  E                      +V+  G  ALYRG  PV+ S+  SN V+F+  + LKA   + RQ T  S      L  G  AG++NV++TTPLWV   R KL  +   N          IL    +I + EGV ALW+G  PSLLLV NP +Q  +Y+ LKR+                           G    L+ +EAF  GAV K VAT+V+YPLQ  QS LR       TD +   +S                      T+ CLL +  R+ G+ GLF+G+E+KLLQTV+T+A MFL YE I   T
Sbjct:    2 SSAVFTYESLVHAVSGAMGSVTAMTVFFPLDTARLRLQVDENRKAK-------STPAILAE----------------------IVKEEGLQALYRGWFPVICSLCCSNFVYFYCFHGLKANWLKGRQSTSSS-----DLIIGIAAGIVNVLVTTPLWVVNTRLKLQGSNFRNADIRPTNYSGILDAFMQIIRGEGVGALWNGTFPSLLLVLNPAIQFMIYEGLKRQLRG------------------------GVPRELSFVEAFMIGAVAKMVATVVTYPLQTIQSILRFGQFNESTDKSKLLSSLR--------------------TIKCLLVNRVRKNGILGLFKGLEAKLLQTVLTAALMFLLYEKIASCT 298          
BLAST of EWM28167.1 vs. NCBI_GenBank
Match: gi|962012677|ref|XP_014879334.1| (PREDICTED: peroxisomal membrane protein PMP34 [Poecilia latipinna])

HSP 1 Score: 177.563 bits (449), Expect = 2.544e-48
Identity = 133/375 (35.47%), Postives = 184/375 (49.07%), Query Frame = 0
Query:   88 ESLIHALAGGLGSALALALTYPLDQVRTFQQVNDTPEDDEYINHGGSSPLLNQETCPATSLARLAFLFRPYRTASVMVQRHGAGALYRGMVPVLISMGLSNAVFFFVSNLLKAILSRYRQRTGKSLGYFGHLATGTIAGVLNVVLTTPLWVAGMRAKLSSAQGWN----------ILTIMAKIWKDEGVMALWSGMIPSLLLVCNPVLQHFVYDVLKRRTLATRRVRSSQLSFPPSSMPIGRSEVTGAAVALTSLEAFYFGAVGKFVATIVSYPLQVAQSRLRQQSQKSETDGNNATTSKEEGKTDWERELLAQSANHYTGTLDCLLDLWRRKGVAGLFQGVESKLLQTVVTSAFMFLAYENIFKVTKGVLDVTD 452
            ESL+HA++G +GS  A+ + +PLD  R   QV++  +         S+P +  +                      +V+  G  A YRG  PV+ S+  SN V+F+  + +KA   + RQ T  +      L  G +AGV+NV+LTTPLWV   R KL  ++  N          IL    +I + EGV ALW+G  PSLLLV NP +Q  VY+ LKR+    RR                     GA+  L+SLEAF  GAV K VAT V+YPLQ  QS LR     + T                E+  L  S     G    L++  R+ GV+GLF+G+E+KLLQTV+T+A MFL YE I   T  V+ ++ 
Sbjct:    9 ESLVHAVSGAVGSVTAMTVFFPLDTARLRLQVDENRKAK-------STPAILAD----------------------IVKEEGLLAPYRGWFPVICSLCCSNFVYFYCFHWMKASWLKSRQSTPST-----DLIVGIVAGVINVLLTTPLWVVNTRLKLQGSKFHNSDIRPTNYSGILDAFKQIVRKEGVGALWNGTFPSLLLVLNPAIQFMVYEGLKRQ---LRR---------------------GASRELSSLEAFIIGAVAKAVATTVTYPLQTMQSVLRFGQVNTPT----------------EKSTLLSSLQTLQG---LLVNRARKHGVSGLFKGLEAKLLQTVLTAALMFLLYEKIASSTFRVMGLSS 306          
BLAST of EWM28167.1 vs. NCBI_GenBank
Match: gi|219113775|ref|XP_002186471.1| (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >gi|209583321|gb|ACI65941.1| predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 174.866 bits (442), Expect = 3.507e-48
Identity = 100/269 (37.17%), Postives = 148/269 (55.02%), Query Frame = 0
Query:  173 LYRGMVPVLISMGLSNAVFFFVSNLLKAILSRYRQRTGKSLGYFGHLATGTIAGVLNVVLTTPLWVAGMRAKLSSAQGWNILTIMAKIWKDEGVMALWSGMIPSLLLVCNPVLQHFVYDVLKRRTLATRRVRSSQLSFPPSSMPIGRSEVTGAAVALTSLEAFYFGAVGKFVATIVSYPLQVAQSRLRQQSQKSETDGNNATTSKEEGKTDWERELLAQSANHYTGTLDCLLDLWRRKGVAGLFQGVESKLLQTVVTSAFMFLAYENIF 441
            LYRG+ P++ ++ +SN +FF+V+ L+K ++         S      L    +AGV+NV+LT PLWV  +R         ++L  +    K+ G+  LW G   S+LLV NPV+Q FVY+ LK R +A+RR+  +                      LT+LEAF+ GAV K +ATI +YPLQ+ Q+ LR Q Q        +T   + G+T         +A  Y GT DC++ L+RR GV G+F G+ +K+LQTV+T++F FL YE I 
Sbjct:    1 LYRGVTPIVATIAISNFIFFYVNELMKRLMVSPNTSRTSSQQRLRLLIASCMAGVVNVLLTNPLWVTNLRIVAGDTFSESLLVELYNAVKNHGLAHLWKGTSTSILLVSNPVIQFFVYEQLKNRRVASRRLGDN----------------------LTALEAFWTGAVAKTIATITTYPLQLTQAVLRMQGQIDGVIAAESTPPNDHGRT-------IIAAPRYLGTWDCIVKLYRRGGVEGIFTGMRAKMLQTVLTASFTFLTYEQIL 240          
BLAST of EWM28167.1 vs. NCBI_GenBank
Match: gi|658862293|ref|XP_008413931.1| (PREDICTED: peroxisomal membrane protein PMP34 [Poecilia reticulata])

HSP 1 Score: 176.407 bits (446), Expect = 6.155e-48
Identity = 132/375 (35.20%), Postives = 184/375 (49.07%), Query Frame = 0
Query:   88 ESLIHALAGGLGSALALALTYPLDQVRTFQQVNDTPEDDEYINHGGSSPLLNQETCPATSLARLAFLFRPYRTASVMVQRHGAGALYRGMVPVLISMGLSNAVFFFVSNLLKAILSRYRQRTGKSLGYFGHLATGTIAGVLNVVLTTPLWVAGMRAKLSSAQGWN----------ILTIMAKIWKDEGVMALWSGMIPSLLLVCNPVLQHFVYDVLKRRTLATRRVRSSQLSFPPSSMPIGRSEVTGAAVALTSLEAFYFGAVGKFVATIVSYPLQVAQSRLRQQSQKSETDGNNATTSKEEGKTDWERELLAQSANHYTGTLDCLLDLWRRKGVAGLFQGVESKLLQTVVTSAFMFLAYENIFKVTKGVLDVTD 452
            ESL+HA++G +GS  A+ + +PLD  R   QV++  +         S+P +  +                      +V+  G  A YRG  PV+ S+  SN V+F+  + +KA   + RQ T  +      L  G +AGV+NV+LTTPLWV   R KL  ++  N          IL    +I   EGV ALW+G  PSLLLV NP +Q  +Y+ LKR+    RR                     GA+  L+SLEAF  GAV K VAT V+YPLQ+ QS LR     + T                E+  L  S     G    L++  R+ GV+GLF+G+E+KLLQTV+T+A MFL YE I   T  V+ ++ 
Sbjct:    9 ESLVHAVSGAVGSVTAMTVFFPLDTARLRLQVDENRKAK-------STPAILAD----------------------IVKEEGLLAPYRGWFPVICSLCCSNFVYFYCFHWMKASWLKSRQSTPST-----DLIVGIVAGVINVLLTTPLWVVNTRLKLQGSKFHNSDIRPTNYSGILDAFKQIIHKEGVGALWNGTFPSLLLVLNPAIQFMIYEGLKRQ---LRR---------------------GASRELSSLEAFIIGAVAKAVATTVTYPLQMMQSILRFGQVSTPT----------------EKSTLLSSLQTLQG---LLVNRARKHGVSGLFKGLEAKLLQTVLTAALMFLLYEKISSSTFRVMGLSS 306          
The following BLAST results are available for this feature:
BLAST of EWM28167.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585110512|gb|EWM28167.1|0.000e+0100.00solute carrier family 25 (mitochondrial carrier pe... [more]
gi|291241258|ref|XP_002740530.1|1.145e-5236.31PREDICTED: peroxisomal membrane protein PMP34-like... [more]
gi|298707589|emb|CBJ30168.1|1.901e-5134.18conserved unknown protein [Ectocarpus siliculosus][more]
gi|557778864|ref|XP_005189059.1|1.869e-4933.15PREDICTED: peroxisomal membrane protein PMP34 [Mus... [more]
gi|617443005|ref|XP_007565795.1|2.939e-4935.73PREDICTED: peroxisomal membrane protein PMP34 isof... [more]
gi|961832590|ref|XP_014838129.1|8.078e-4935.73PREDICTED: peroxisomal membrane protein PMP34 isof... [more]
gi|1108906675|ref|XP_010727424.2|1.601e-4834.40PREDICTED: peroxisomal membrane protein PMP34-like... [more]
gi|962012677|ref|XP_014879334.1|2.544e-4835.47PREDICTED: peroxisomal membrane protein PMP34 [Poe... [more]
gi|219113775|ref|XP_002186471.1|3.507e-4837.17predicted protein, partial [Phaeodactylum tricornu... [more]
gi|658862293|ref|XP_008413931.1|6.155e-4835.20PREDICTED: peroxisomal membrane protein PMP34 [Poe... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2408rna2408Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications