EWM30435.1, cds240 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30435.1 vs. NCBI_GenBank
Match: gi|585113097|gb|EWM30435.1| (dna polymerase kappa [Nannochloropsis gaditana]) HSP 1 Score: 1702.18 bits (4407), Expect = 0.000e+0 Identity = 826/826 (100.00%), Postives = 826/826 (100.00%), Query Frame = 0
Query: 1 MAGKNASMEDIVGNDADEEDFFFTQTQEDGDEVWESDMEDARGRNTSSASPSALGANSDTVIQRSGHTKHCLSSAEKKVVHSEQNTSALPLPDGADAVISRTSPSHSFPRSTSGPQKTASTCYVAALDSTRHTRHFYTFLGDKAGMDEKKRSREEVERIVHEASKNSKFFLAQQRNDLKVQERIQVMQSKLNMLSEPLRRSLEAEADRELAAAEKAYRTWRQVCVVVDLDAFFTSVEERDEPALREVPFAVGGGVISTANYEARKYGVRSAMPLFIARKLCPQLLVRSTRFEAYQTVAEQTRAIFRDYDPRFRAGSLDEAYLDLTAYVHAAVGDQGGEPPTPEEKPGTPLFAPVTALSSGFRGVEDNEGEGGAAWGAMGVDEEEEEVRERAIQEREASYWGVAERVVEEIRRRIHGVTGVTASAGIATSFCLAKMASNENKPNGQFRVGDVASFLRDAPVRKVSGIGRITERCLVAGLDVQTCFQLWAKRALLYHVYTPQTARWLLCKSVGLDGGGLVDPEEGPGGQRTGRKGISRERTFAALSRKEDLLEKLRLICDSLAADMAREGLKAKNLTLKLKSSDFAVTTRAKNCAFYVSTSQELYQHALSLLLPQLPVTLRLMGVRASHFQPKPQAPPKGQGCLEAYVATGLEAAMAERPPSGSAKRVASPSSLGRPPRLGESGSFSTGPPLLVVDADLLSPAGGGKEATRATVTKQVPVYTCPLCNQRLSVVLSELNRHVDSCLRESDPYFLEKEMPEESKKGDVHRAGTKPCDAEDKATANKKSRRSENVNCSSRGGKKKKLPPARPDAKPLEHFFGSNSRRPTTM 826
MAGKNASMEDIVGNDADEEDFFFTQTQEDGDEVWESDMEDARGRNTSSASPSALGANSDTVIQRSGHTKHCLSSAEKKVVHSEQNTSALPLPDGADAVISRTSPSHSFPRSTSGPQKTASTCYVAALDSTRHTRHFYTFLGDKAGMDEKKRSREEVERIVHEASKNSKFFLAQQRNDLKVQERIQVMQSKLNMLSEPLRRSLEAEADRELAAAEKAYRTWRQVCVVVDLDAFFTSVEERDEPALREVPFAVGGGVISTANYEARKYGVRSAMPLFIARKLCPQLLVRSTRFEAYQTVAEQTRAIFRDYDPRFRAGSLDEAYLDLTAYVHAAVGDQGGEPPTPEEKPGTPLFAPVTALSSGFRGVEDNEGEGGAAWGAMGVDEEEEEVRERAIQEREASYWGVAERVVEEIRRRIHGVTGVTASAGIATSFCLAKMASNENKPNGQFRVGDVASFLRDAPVRKVSGIGRITERCLVAGLDVQTCFQLWAKRALLYHVYTPQTARWLLCKSVGLDGGGLVDPEEGPGGQRTGRKGISRERTFAALSRKEDLLEKLRLICDSLAADMAREGLKAKNLTLKLKSSDFAVTTRAKNCAFYVSTSQELYQHALSLLLPQLPVTLRLMGVRASHFQPKPQAPPKGQGCLEAYVATGLEAAMAERPPSGSAKRVASPSSLGRPPRLGESGSFSTGPPLLVVDADLLSPAGGGKEATRATVTKQVPVYTCPLCNQRLSVVLSELNRHVDSCLRESDPYFLEKEMPEESKKGDVHRAGTKPCDAEDKATANKKSRRSENVNCSSRGGKKKKLPPARPDAKPLEHFFGSNSRRPTTM
Sbjct: 1 MAGKNASMEDIVGNDADEEDFFFTQTQEDGDEVWESDMEDARGRNTSSASPSALGANSDTVIQRSGHTKHCLSSAEKKVVHSEQNTSALPLPDGADAVISRTSPSHSFPRSTSGPQKTASTCYVAALDSTRHTRHFYTFLGDKAGMDEKKRSREEVERIVHEASKNSKFFLAQQRNDLKVQERIQVMQSKLNMLSEPLRRSLEAEADRELAAAEKAYRTWRQVCVVVDLDAFFTSVEERDEPALREVPFAVGGGVISTANYEARKYGVRSAMPLFIARKLCPQLLVRSTRFEAYQTVAEQTRAIFRDYDPRFRAGSLDEAYLDLTAYVHAAVGDQGGEPPTPEEKPGTPLFAPVTALSSGFRGVEDNEGEGGAAWGAMGVDEEEEEVRERAIQEREASYWGVAERVVEEIRRRIHGVTGVTASAGIATSFCLAKMASNENKPNGQFRVGDVASFLRDAPVRKVSGIGRITERCLVAGLDVQTCFQLWAKRALLYHVYTPQTARWLLCKSVGLDGGGLVDPEEGPGGQRTGRKGISRERTFAALSRKEDLLEKLRLICDSLAADMAREGLKAKNLTLKLKSSDFAVTTRAKNCAFYVSTSQELYQHALSLLLPQLPVTLRLMGVRASHFQPKPQAPPKGQGCLEAYVATGLEAAMAERPPSGSAKRVASPSSLGRPPRLGESGSFSTGPPLLVVDADLLSPAGGGKEATRATVTKQVPVYTCPLCNQRLSVVLSELNRHVDSCLRESDPYFLEKEMPEESKKGDVHRAGTKPCDAEDKATANKKSRRSENVNCSSRGGKKKKLPPARPDAKPLEHFFGSNSRRPTTM 826
BLAST of EWM30435.1 vs. NCBI_GenBank
Match: gi|299117623|emb|CBN75465.1| (hypothetical protein Esi_0099_0091 [Ectocarpus siliculosus]) HSP 1 Score: 340.887 bits (873), Expect = 4.395e-102 Identity = 241/673 (35.81%), Postives = 344/673 (51.11%), Query Frame = 0
Query: 136 FYTFLGDKAGMDEKKRSREEVERIVHEASKNSKFFLAQQRNDLKVQERIQVMQSKLNMLSEPLRRSLEAEADRELAAAEKAYRTWRQVCVVVDLDAFFTSVEERDEPALREVPFAVGG-GVISTANYEARKYGVRSAMPLFIARKLCPQLLVRSTRFEAYQTVAEQTRAIFRDYDPRFRAGSLDEAYLDLTAYVHAAVGDQGGEPPTPEEKPGTPLFAPVTALSSGFRGVEDNEGEGGAAWGAMGVDEEEEEVR------------------ERAIQE-REASYWGVAERVVEEIRRRIHGVTGVTASAGIATSFCLAKMASNENKPNGQFRVG----DVASFLRDAPVRKVSGIGRITERCLVAGLDVQTCFQLWAKRALLYHVYTPQTARWLLCKSVGLDGGGL-VDPEEGPGGQRTGRKGISRERTFAALSRKEDLLEKLRLICDSLAADMAREGLKAKNLTLKLKSSDFAVTTRAKNCAFYVSTSQELYQHALSLLLPQL-----------PVTLRLMGVRASHFQPKPQAPP-KGQGCLEAYVATGL-------------------------EAAMAERPPSGSAKRVA--SPSSLGRPPRLGESGSFSTGPPLLVVDADLLSPAGGGKEATRATVTKQVPVYTCPLCNQRLSVVL-SELNRHVDSCL 743
+ F +KAGM +E V RI++E SKNS +F + D K+ +++ M+ KL L + +AD+ +A +A R +VC+V+D+D F+ +VE RD P L + P AVGG +IST NY+AR GVRSAMP FI RKLCP+L+ +E Y VAEQ R IFR+YDPR RA SLDEAYL++T + +G G P A S + D + +MG++ E R R+ +E R + A + EEIR RI T +TAS GI +F LAK+AS+ NKP+GQ +G +V FL D PVRK+ G+G++ E+CL L V TC L+ +R + HV TP T+RWL+ S+G+ V E+ RK IS+ERTF LS DLL K R ICDSLAA+MA +GL+AK + LK+K++ F V T+ YVS++ +L+ A +LL ++ + LRLMGVRAS F+ + AP GQ L+ ++++ A AE+ P G R + +P+++ P G G + P + + G + A AT V +CP+C + L + LNRH+D+CL
Sbjct: 1 MFVFSNNKAGMGSV--DKERVNRIIYEMSKNSSYFKQAKLQDDKLDQKVAEMKVKLKALGTVRKAQRTRQADK-IATELEAQRQLDEVCMVIDMDMFYAAVEVRDRPELADKPVAVGGESMISTTNYQARLKGVRSAMPGFIGRKLCPELVFVKPDYEKYTVVAEQIREIFREYDPRMRAYSLDEAYLNVTKVLTERLGLDGSNAQAGVAAPAAAAGASEHVCSGTYEAEADT-----SRRPSMGLNVTYPEKRYEGDEEDDEEARDGRSGERRSPRETRRIRLFEAARALAEEIRGRIREATKLTASVGIGPNFMLAKIASDWNKPDGQMCIGGDRAEVLRFLHDLPVRKIGGVGKVQEKCLREALGVVTCGDLFRERGSVIHVMTPHTSRWLIKASLGIASADHDVATEQAQAVGAVTRKQISKERTFGELSAPRDLLNKCREICDSLAAEMATKGLEAKTVGLKVKTTKFQVRTQDSTGNAYVSSADDLFSAASALLQREIQGAAAASAPGGKLRLRLMGVRASGFRGQAGAPILPGQATLDGFLSSKAAEGGCQGEDESGNDGKRQQREEEADSAGGAEQQPPGGLSRPSRPTPAAMEHPFVGGGQGRPGSRPRSKELLRGVQPATGIPRSALLATAAANV---SCPVCGEELGAASNTALNRHLDACL 662
BLAST of EWM30435.1 vs. NCBI_GenBank
Match: gi|673047659|ref|XP_008877790.1| (hypothetical protein, variant 1 [Aphanomyces invadans] >gi|574466419|gb|ETV93448.1| hypothetical protein, variant 1 [Aphanomyces invadans]) HSP 1 Score: 330.487 bits (846), Expect = 5.760e-99 Identity = 229/639 (35.84%), Postives = 330/639 (51.64%), Query Frame = 0
Query: 127 LDSTRHTRHFYTFLGDKAGMDEKKRSREEVERIVHEASKNSKFFLAQQRNDLKVQERIQVMQSKLNMLSEPLRRSLEAEADRELAAAEKAYRTWRQVCVVVDLDAFFTSVEERDEPALREVPFAVGG-GVISTANYEARKYGVRSAMPLFIARKLCPQLLVRSTRFEAYQTVAEQTRAIFRDYDPRFRAGSLDEAYLDLTAYVHAAVGDQGGEPPTPEEKPGTPLFAPVTALSSGFRGVEDNEGEGGAAWGAMGVDEEEEEVRERAIQEREASYWGVAERVVEEIRRRIHGVTGVTASAGIATSFCLAKMASNENKPNGQ----FRVGDVASFLRDAPVRKVSGIGRITERCLVAGLDVQTCFQLWAKRALLYHVYTPQTARWLLCKSVGLDGGGLVDPEEGPGGQRTGRKGISRERTFAALSRKEDLLEKLRLICDSLAADMAREGLKAKNLTLKLKSSDFAVTTRAKNCAFYVSTSQELYQHALSLLLPQL-------------PVTLRLMGVRASHFQPKPQAPPKGQGCLEAYVATGLEAAMAERPPSGSAKRVASPSSLGRPPRLGESGSFSTGPPLLVVDADLLSPAGGGKEATRATVTKQVPVYTCPLCNQRLSV-VLSELNRHVDSCLRES 746
+DS++ H + F KAGMD+ RS + + +++ SK+S FF D++ ++I M+++L + R +L A+ D+ +AA E A R + +V VVVD+D FF +VE RD P+L VP AVGG G+I TANY ARK+GVR+AMP FIA+KLCP L++ F Y+ VA QTR IFR++DP F AGSLDEAYLD+T Y+ + G G+ + P S RG E A V E A E S A VV+E+RRRIH T +TASAGIA+ LAK+ S+ NKPNGQ F + F+ PVRK GIG++ E+ L L+V T L+A+R ++HV++ +A+WLL S+G P G R +K SRE TF A S ++LLE+ +++ + +D+ L+ LT+KLK++ FAVT+RA C +S E+ A LL+ + PVT RL+G+R S +P AP G + + A P S ++++ P L P L ST P +AT ++ ++ CP+C V L +N H+D CL ++
Sbjct: 1 MDSSK--EHLFVFSNPKAGMDDIDRS--TINQTIYDLSKDSAFFKNSVDKDVQTDKKIAAMRTQLGVKR---RHNLVADVDQRVAALE-ASRDFSRVHVVVDMDMFFAAVEMRDNPSLAHVPMAVGGMGMICTANYAARKFGVRAAMPGFIAKKLCPSLVLVPPHFSKYEAVAHQTRDIFREFDPHFVAGSLDEAYLDITNYIASVSTTTLG---------GSSVCDPDAKCS---RGSVSTEASSTPRATAGNVFVVEPNGHAYAFDE-NTSMEEKAGAVVQELRRRIHQATQLTASAGIASIPKLAKVCSDINKPNGQYVLPFNRDAIVKFVHHLPVRKFGGIGKVKEKLLAQVLNVATGGDLFARRYDIFHVFSEMSAQWLLQLSLGASAS----PSHDDDGDRPCQKSASRETTFRATSSLQELLERCQVLVKHVHSDLNELQLQGHCLTVKLKTTQFAVTSRAWTCKSALSQLSEMLDVACRLLVKEFNVAAKKHAKDASGPVTYRLLGIRMSMLKP---APSSSAGAWASPIPATSTADHDSAPQPPSVRQLSLPGVLH--PALVPRQLSSTAP-------------HAHHDATPSSEARE----PCPVCGCHFDVWSLFLVNEHIDQCLSKT 592
BLAST of EWM30435.1 vs. NCBI_GenBank
Match: gi|673047661|ref|XP_008877791.1| (hypothetical protein, variant 2 [Aphanomyces invadans] >gi|574466420|gb|ETV93449.1| hypothetical protein, variant 2 [Aphanomyces invadans]) HSP 1 Score: 329.331 bits (843), Expect = 1.250e-98 Identity = 226/639 (35.37%), Postives = 332/639 (51.96%), Query Frame = 0
Query: 127 LDSTRHTRHFYTFLGDKAGMDEKKRSREEVERIVHEASKNSKFFLAQQRNDLKVQERIQVMQSKLNMLSEPLRRSLEAEADRELAAAEKAYRTWRQVCVVVDLDAFFTSVEERDEPALREVPFAVGG-GVISTANYEARKYGVRSAMPLFIARKLCPQLLVRSTRFEAYQTVAEQTRAIFRDYDPRFRAGSLDEAYLDLTAYVHAAVGDQGGEPPTPEEKPGTPLFAPVTALSSGFRGVEDNEGEGGAAWGAMGVDEEEEEVRERAIQEREASYWGVAERVVEEIRRRIHGVTGVTASAGIATSFCLAKMASNENKPNGQ----FRVGDVASFLRDAPVRKVSGIGRITERCLVAGLDVQTCFQLWAKRALLYHVYTPQTARWLLCKSVGLDGGGLVDPEEGPGGQRTGRKGISRERTFAALSRKEDLLEKLRLICDSLAADMAREGLKAKNLTLKLKSSDFAVTTRAKNCAFYVSTSQELYQHALSLLLPQL-------------PVTLRLMGVRASHFQPKPQAPPKGQGCLEAYVATGLEAAMAERPPSGSAKRVASPSSLGRPPRLGESGSFSTGPPLLVVDADLLSPAGGGKEATRATVTKQVPVYTCPLCNQRLSV-VLSELNRHVDSCLRES 746
+DS++ H + F KAGMD+ RS + + +++ SK+S FF D++ ++I M+++L + R +L A+ D+ +AA E A R + +V VVVD+D FF +VE RD P+L VP AVGG G+I TANY ARK+GVR+AMP FIA+KLCP L++ F Y+ VA QTR IFR++DP F AGSLDEAYLD+T Y+ + G + + T SS R + G A DE +++E+ A VV+E+RRRIH T +TASAGIA+ LAK+ S+ NKPNGQ F + F+ PVRK GIG++ E+ L L+V T L+A+R ++HV++ +A+WLL S+G P G R +K SRE TF A S ++LLE+ +++ + +D+ L+ LT+KLK++ FAVT+RA C +S E+ A LL+ + PVT RL+G+R S +P AP G + + A P S ++++ P L P L ST P +AT ++ ++ CP+C V L +N H+D CL ++
Sbjct: 1 MDSSK--EHLFVFSNPKAGMDDIDRS--TINQTIYDLSKDSAFFKNSVDKDVQTDKKIAAMRTQLGVKR---RHNLVADVDQRVAALE-ASRDFSRVHVVVDMDMFFAAVEMRDNPSLAHVPMAVGGMGMICTANYAARKFGVRAAMPGFIAKKLCPSLVLVPPHFSKYEAVAHQTRDIFREFDPHFVAGSLDEAYLDITNYIASVSTTTLGGSSVCDPDAKCSRGSVSTEASSTPRATAEPNGH------AYAFDENT------SMEEK-------AGAVVQELRRRIHQATQLTASAGIASIPKLAKVCSDINKPNGQYVLPFNRDAIVKFVHHLPVRKFGGIGKVKEKLLAQVLNVATGGDLFARRYDIFHVFSEMSAQWLLQLSLGASAS----PSHDDDGDRPCQKSASRETTFRATSSLQELLERCQVLVKHVHSDLNELQLQGHCLTVKLKTTQFAVTSRAWTCKSALSQLSEMLDVACRLLVKEFNVAAKKHAKDASGPVTYRLLGIRMSMLKP---APSSSAGAWASPIPATSTADHDSAPQPPSVRQLSLPGVLH--PALVPRQLSSTAP-------------HAHHDATPSSEARE----PCPVCGCHFDVWSLFLVNEHIDQCLSKT 586
BLAST of EWM30435.1 vs. NCBI_GenBank
Match: gi|1062802673|ref|XP_017925925.1| (PREDICTED: DNA polymerase kappa isoform X1 [Manacus vitellinus] >gi|1062802676|ref|XP_017925926.1| PREDICTED: DNA polymerase kappa isoform X1 [Manacus vitellinus] >gi|1062802679|ref|XP_017925927.1| PREDICTED: DNA polymerase kappa isoform X1 [Manacus vitellinus] >gi|1062802683|ref|XP_017925928.1| PREDICTED: DNA polymerase kappa isoform X1 [Manacus vitellinus]) HSP 1 Score: 323.939 bits (829), Expect = 3.221e-94 Identity = 221/636 (34.75%), Postives = 341/636 (53.62%), Query Frame = 0
Query: 142 DKAGMDEKKRSREEVERIVHEASKNSKFFLAQQRNDLKVQERIQ-VMQSKLNMLSEPLRRSLEAEADRELAAAEKAYRTWRQVCVVVDLDAFFTSVEERDEPALREVPFAVGG-GVISTANYEARKYGVRSAMPLFIARKLCPQLLVRSTRFEAYQTVAEQTRAIFRDYDPRFRAGSLDEAYLDLTAYVHAAVGDQGGEPPTPEEKPGTPLFAPV---TALSSGFRGVEDNEGEGGAAWGAMGVDEEEEEVRERAIQEREASYWGV-AERVVEEIRRRIHGVTGVTASAGIATSFCLAKMASNENKPNGQFRVG----DVASFLRDAPVRKVSGIGRITERCLVAGLDVQTCFQLWAKRALLYHVYTPQTARWLLCKSVGLDGGGLVDPEEGPGGQRTGRKGISRERTFAALSRKEDLLEKLRLICDSLAADMAREGLKAKNLTLKLKSSDFAVTTRAKNCAFYVSTSQELYQHALSLLLPQL------PVTLRLMGVRASHFQPKPQAPPKGQGCLEAYVATGLEAAMAERPPSGSAKRVASPSSLG----------RPPRLGESGSFSTGPPLLVVDADLL----SPAGGGKEATRAT---VTKQVPVYTCPLC-NQRLSVVLSELNRHVDSCL 743
+KAGM + +E++ +I+ EA+K S+F+ + + D +V +RI+ +MQ K + ++ L ++ + + D+ + E+ R V +D+DAF+ +VE RD P L+E P AVG ++ST+NY AR++GVR+AMP FIA+KLCP L + FE Y V+++ R I +YDP F LDEAYL++T ++ + PE++ F T + + D EG + + ++ +++R+ + +G AE VV+EIR RI T +TASAGIA + LAKM S+ NKPNGQ+R+ V FL+D P+RKV GIG++TE+ L A L + TC +L+ +RALL +++ + R L S+GL L E RK +S ERTF+ ++R ED R +C LA ++ +EGLK K +TLKLK+ +F V TRA VST +E++ A LL ++ P+ +RLMGVR S F + + + Q + +++ +G E P S + + SS R RL S + PP V L S A +E + T + ++TCP+C ++ S L ELNRH+D CL
Sbjct: 25 NKAGM--QGLDKEKINKIIMEATKGSRFYENELKKDQQVNQRIEKMMQLKEKITTQQLLKA-QLQVDKLVVELEQT-RNLSSTIVHIDMDAFYAAVEMRDNPELKEKPIAVGSMSMLSTSNYHARRFGVRAAMPGFIAKKLCPHLTIVPLNFEKYGKVSKEVREILAEYDPNFMPMGLDEAYLNITEHLEERLN-------WPEDR--RRFFFNTENPTGVDKDDMNMSDKFNEGECSSSPVLFEDNTSHLKQRSQSVENSVVFGTSAEEVVKEIRFRIEQKTQLTASAGIAPNTMLAKMCSDRNKPNGQYRITPERQAVLDFLKDLPIRKVPGIGKVTEKMLKA-LGIVTCSELYQQRALLSLLFSEISWRNFLDISLGLGSTHLEKDGE--------RKSMSTERTFSEINRAEDQYSLCRELCRDLAQELQKEGLKGKTVTLKLKNVNFEVKTRASTVLSSVSTEEEIFAVAKDLLGTEIDSVAPHPLRIRLMGVRVSGFLSEEEKKYQ-QKSITSFLKSGKEIGFLRLQPEKSNQEYFTKSSEASHRGSFFDQKRAARLLNSENL---PPNEAVGKQLFHDRKSSANFVEETKKLTGFQSSNVCKIFTCPVCFEEQSSDNLEELNRHIDECL 634
BLAST of EWM30435.1 vs. NCBI_GenBank
Match: gi|727001737|ref|XP_010391071.1| (DNA polymerase kappa isoform X1 [Corvus cornix cornix]) HSP 1 Score: 320.472 bits (820), Expect = 1.196e-92 Identity = 253/769 (32.90%), Postives = 378/769 (49.15%), Query Frame = 0
Query: 106 HSFPRSTSGPQKTA--STCYVAALDSTRHTRHFYTFLGD-KAGMDEKKRSREEVERIVHEASKNSKFFLAQQRNDLKVQERIQ-VMQSKLNMLSEPLRRSLEAEADRELAAAEKAYRTWRQVCVVVDLDAFFTSVEERDEPALREVPFAVGG-GVISTANYEARKYGVRSAMPLFIARKLCPQLLVRSTRFEAYQTVAEQTRAIFRDYDPRFRAGSLDEAYLDLTAYVHAAVG---DQ-----GGEPPTPEEKPGTPLFAPVT--ALSSGFRGVEDNEGEGGAAWGAMGVDEEEEEVRERAIQEREASYWGVAERVVEEIRRRIHGVTGVTASAGIATSFCLAKMASNENKPNGQFRVG----DVASFLRDAPVRKVSGIGRITERCLVAGLDVQTCFQLWAKRALLYHVYTPQTARWLLCKSVGLDGGGLVDPEEGPGGQRTGRKGISRERTFAALSRKEDLLEKLRLICDSLAADMAREGLKAKNLTLKLKSSDFAVTTRAKNCAFYVSTSQELYQHALSLLLPQL------PVTLRLMGVRASHFQPKPQAPPKGQGCLEAYVATGLEAAMAERPPSGSAKRVASPSSLG----------RPPRLGESGSF----STGPPLLVVDADLLSPAGGGKEATRATVTKQVPVYTCPLC-NQRLSVVLSELNRHVDSCL-----------------RESDPYFL---EKEMPEESKKGDVHR-AGTKPCDAEDKATANKKSRRSENVNCSSRGGKKKKLPPARPDAKPLE 813
H F RST K A S+C L L D KAGM + +E++ +I+ +A+K S+F+ + + D +V +RI+ +MQ K + ++ L ++ + + D+ + E++ R V +D+DAF+ +VE RD P L+E P AVG ++ST+NY AR++GVR+AMP FIA++LCP L + FE Y V+++ R I +YDP F LDEAYL++T ++ + D+ E T +K G + A +SS EDN + G+ E V + AE VV+EIR RI T +TASAGIA + LAKM S+ NKPNGQ+R+ V FL+D P+RKV GIG++TE+ L A L + TC +L+ +RALL +++ + R L S+GL L E RK +S ERTF+ ++ ED R +C LA D+ +EGLK K +TLKLK+ +F V TRA VST +E++ A LL ++ P+ +RLMGVR S F + + + Q + +++ +G E P S + + +S R R S + S G L D + K+ T + ++TCP+C ++ S L ELNRH+D CL RE+ P FL + E +E +K + + AGT +S NV+ SS +K PD P E
Sbjct: 16 HLFSRSTMDDMKKAANSSCNDGVL--------LRMGLNDNKAGM--QGLDKEKINKIIMDATKGSRFYENELKKDQQVNQRIEKMMQLKEKVTTQQLLKA-QLQVDKLVIELERS-RNLSSTIVHIDMDAFYAAVEMRDNPELKEKPIAVGSMSMLSTSNYHARRFGVRAAMPGFIAKRLCPHLTIVPLNFEKYGKVSKEVREILAEYDPNFMPMGLDEAYLNITEHLEERLNWPEDRRRFFFNTESTTRIDKDGMNMSAKFNEGEVSSSPVLFEDNTSLMDDGFEQRGLSVENSVV-----------FGTSAEEVVKEIRFRIEQKTQLTASAGIAPNTMLAKMCSDRNKPNGQYRISPERQAVLDFLKDLPIRKVPGIGKVTEKMLKA-LGIVTCSELYQQRALLSLLFSEVSWRNFLDISLGLGSTHLEKDGE--------RKSMSTERTFSEINTAEDQYNLCRELCRDLAQDLQKEGLKGKTVTLKLKNVNFEVKTRASTVLSSVSTEEEIFAVAKDLLGTEIDSVAPHPLRIRLMGVRVSGFLTEEEKKYQ-QRSITSFLKSGKEIGFLRLQPEKSNQEYFTKNSEASHRGSFFDQKRAARQLNSENISPNESRGKQLFHDDKSSANFVEERKKVTDLQNSNAREIFTCPVCFEEQSSNNLEELNRHIDECLSGMHVKDTVEISKNDSSRENTPNFLPQFKNEHVDEREKNNTDQLAGTD---------------QSANVSDSSTNNSTEKFGQIIPDKSPRE 736
BLAST of EWM30435.1 vs. NCBI_GenBank
Match: gi|560927918|ref|XP_006190121.1| (PREDICTED: DNA polymerase kappa [Camelus ferus] >gi|946668812|ref|XP_014419277.1| PREDICTED: DNA polymerase kappa [Camelus ferus]) HSP 1 Score: 320.087 bits (819), Expect = 1.201e-92 Identity = 224/680 (32.94%), Postives = 350/680 (51.47%), Query Frame = 0
Query: 117 KTASTCYVAALDSTRHTRHFYTFLGD-KAGMDEKKRSREEVERIVHEASKNSKFFLAQQRNDLKVQERIQ-VMQSKLNMLSEPLRRSLEAEADRELAAAEKAYRTWRQVCVVVDLDAFFTSVEERDEPALREVPFAVGG-GVISTANYEARKYGVRSAMPLFIARKLCPQLLVRSTRFEAYQTVAEQTRAIFRDYDPRFRAGSLDEAYLDLTAYVH-------------AAVGDQGGEPPTPEEKPGTPLFAPVTALSSGFRGV-----EDNEGEGGAAWGAMGVDEEEEEVRERAIQEREASYWGVAERVVEEIRRRIHGVTGVTASAGIATSFCLAKMASNENKPNGQFRV----GDVASFLRDAPVRKVSGIGRITERCLVAGLDVQTCFQLWAKRALLYHVYTPQTARWLLCKSVGLDGGGLVDPEEGPGGQRTG-RKGISRERTFAALSRKEDLLEKLRLICDSLAADMAREGLKAKNLTLKLKSSDFAVTTRAKNCAFYVSTSQELYQHALSLLLPQL------PVTLRLMGVRASHFQPKPQAPPKGQGCLEAYVATGLEAAMAERPPSGSAKRVASPSSLGRPPRLGESGSFSTGP------------PLLVVDADLLSPAGG--------GKEATRATVTKQVPVYTCPLC-NQRLSVVLSELNRHVDSCL 743
K S C DS + L D KAGM+ +E++ +I+ EA+K S+F+ + + + +V +RI+ +MQ K + S+ LR++ + +ADR E++ R V +D+DAF+ +VE RD P L+E P AVG ++ST+NY AR++GVR+AMP FIA++LCPQL++ F+ Y+ V+ + + I DYDP F A SLDEAYL++T ++ G+ +KPG + LS R + ED+ + + + V+ EE I + + AE VV+EIR RI T +TASAGIA + LAK+ S++NKPNGQ+++ V F++D P+RKVSGIG++TE+ L A L + TC +L+ +RALL+ +++ + + L S+GL L +R G RK +S ERTF+ +S+ E+ + +C LA D+ +EGLK + +T+KLK+ +F V TRA + VST++E++ A LL ++ P+ LRLMGVR S F P + Q + ++ G + A +G +P + SF VD L + K + ++TCP+C ++ SV L N+HVD+CL
Sbjct: 5 KEKSDCTEEKHDSYKDDIMLRMGLNDNKAGME--GLDKEKINKIIMEATKGSRFYGNELKKEKQVNQRIENMMQQKAQITSQQLRKA-QIQADRFAMELEQS-RDLNNTIVHIDMDAFYAAVEMRDNPELKEKPIAVGSMSMLSTSNYHARRFGVRAAMPGFIAKRLCPQLIIVPPNFDKYRAVSREVKEILADYDPNFMAMSLDEAYLNITKHLEERQNWPEDKRKYFIKTGNS-----LENDKPGKEV-----KLSECERSISPLLFEDSPPDLQSTGNPLQVNSEEP--NNPQILQNAIVFGTSAEEVVKEIRFRIEQKTTLTASAGIAPNTMLAKVCSDKNKPNGQYQIPPNRQAVMDFIKDLPIRKVSGIGKVTEKMLKA-LGIMTCTELYEQRALLFLLFSETSWHYFLHISLGLGSTHL---------ERDGERKSMSVERTFSEISKAEEQYSLCQELCSELAQDLQKEGLKGRTVTIKLKNVNFEVKTRASTVSSVVSTAEEIFAIAKELLRTEIDADFPHPLRLRLMGVRLSSF-PNEEDKKHQQRSIIGFLQPGNQTLSA----TGCILEKTDKDQFLKPLEMSHKKSFFDKKRSERKWSHQDTFKFETVDKQSLQTSQSFQVLKKKMSKNLETLESSDNCQIFTCPVCFKEQGSVSLEAFNKHVDACL 653
BLAST of EWM30435.1 vs. NCBI_GenBank
Match: gi|1096006086|ref|XP_018774010.1| (PREDICTED: DNA polymerase kappa isoform X3 [Serinus canaria]) HSP 1 Score: 318.931 bits (816), Expect = 1.931e-92 Identity = 223/634 (35.17%), Postives = 343/634 (54.10%), Query Frame = 0
Query: 142 DKAGMDEKKRSREEVERIVHEASKNSKFFLAQQRNDLKVQERIQ-VMQSKLNMLSEPLRRSLEAEADRELAAAEKAYRTWRQVCVVVDLDAFFTSVEERDEPALREVPFAVGG-GVISTANYEARKYGVRSAMPLFIARKLCPQLLVRSTRFEAYQTVAEQTRAIFRDYDPRFRAGSLDEAYLDLTAYVHAAVGDQGGEPPTPEEKPGTPLFAPVTALSSGFRGVEDNEGEGGAAWGAMGVDEEEEEVRERAIQEREASYWGV-AERVVEEIRRRIHGVTGVTASAGIATSFCLAKMASNENKPNGQFRVG----DVASFLRDAPVRKVSGIGRITERCLVAGLDVQTCFQLWAKRALLYHVYTPQTARWLLCKSVGLDGGGLVDPEEGPGGQRTGRKGISRERTFAALSRKEDLLEKLRLICDSLAADMAREGLKAKNLTLKLKSSDFAVTTRAKNCAFYVSTSQELYQHALSLLLPQL------PVTLRLMGVRASHFQPKPQAPPKGQGCLEAYVATGLEAAMAERPPSGSAKRVASPSSLGRPPRLGESGSFSTGPPLLVVDADLLSPAGG-GKE--------ATRATVTKQV---------PVYTCPLCNQRLSV-VLSELNRHVDSCL 743
+KAGM + +E + +I+ EA+K SKF+ + + D +V +RI+ +MQ K + ++ L ++ + + D+ + E+ R V +D+DAF+ +VE RD P L+E P AVG ++ST+NY AR++GVR+AMP FIA++LCP L + FE Y V+++ R I +YDP F LDEAYL++T ++ + PE++ F T ++G EDN + +D+E E +R + + +G AE VV+EIR RI T +TASAGIA + LAKM S+ NKPNGQ+R+ V +FL+D P+RKV GIG++TE+ L A L + TC +L+ +RALL +++ + R L S+GL L E RK +S ERTF+ ++ ED R +C LA D+ +EGLK K +TLKLK+ +F V TRA VST +E++ A LL ++ P+ +RLMGVR S F + + + Q + +++ +G E P S + + +S P G F + ++ +SP GK+ A A TK+V ++TCP+C ++ S L ELN+H+D CL
Sbjct: 25 NKAGM--QGLDKERINKIIMEATKGSKFYENELKKDQQVNQRIEKMMQLKEKITAQQLLKA-QMQVDKLVIELEQN-RNLSSTIVHIDMDAFYAAVEMRDNPELKEKPIAVGSMSMLSTSNYHARRFGVRAAMPGFIAKRLCPHLTIVPLNFEKYSKVSKEVREILAEYDPNFMPMGLDEAYLNITEHLEERLN-------WPEDRRR---FFLNTESTTGIVLFEDN---------SSLMDDEHE---QRGLSLENSVVFGTSAEEVVKEIRFRIEQKTQLTASAGIAPNTMLAKMCSDRNKPNGQYRISPERLAVLAFLKDLPIRKVPGIGKVTEKMLKA-LGIVTCSELYQQRALLSLLFSEVSWRHFLDISLGLGSTHLEKDGE--------RKSMSTERTFSEVNTAEDQYSLCRELCRDLAQDLQKEGLKGKTVTLKLKNVNFEVKTRASTVLSSVSTEEEIFTVAKDLLGTEIDSVAPHPLRIRLMGVRVSGFLTEEEKKYQ-QKSITSFLRSGKEIGFLRLQPEKSNQEYFTKNS--EAPHRG--SFFDQKRAARQLSSENISPNESRGKQLFHDDRASANIAEETKKVLDLPNSNVWEIFTCPVCFEKQSSNNLEELNKHIDECL 618
BLAST of EWM30435.1 vs. NCBI_GenBank
Match: gi|821464330|ref|XP_012396575.1| (PREDICTED: DNA polymerase kappa isoform X2 [Sarcophilus harrisii]) HSP 1 Score: 318.931 bits (816), Expect = 2.185e-92 Identity = 221/651 (33.95%), Postives = 344/651 (52.84%), Query Frame = 0
Query: 142 DKAGMDEKKRSREEVERIVHEASKNSKFFLAQQRNDLKVQERIQ-VMQSKLNMLSEPLRRSLEAEADRELAAAEKAYRTWRQVCVVVDLDAFFTSVEERDEPALREVPFAVGG-GVISTANYEARKYGVRSAMPLFIARKLCPQLLVRSTRFEAYQTVAEQTRAIFRDYDPRFRAGSLDEAYLDLTAYVHAAVG----------DQGGEPPTPEEKPGTPLF-AP---VTALSSGFRGVEDNEGEGGAAWGAMGVDEEEEEVRERAIQEREASYWGVAERVVEEIRRRIHGVTGVTASAGIATSFCLAKMASNENKPNGQFRVGD----VASFLRDAPVRKVSGIGRITERCLVAGLDVQTCFQLWAKRALLYHVYTPQTARWLLCKSVGLDGGGLVDPEEGPGGQRTG-RKGISRERTFAALSRKEDLLEKLRLICDSLAADMAREGLKAKNLTLKLKSSDFAVTTRAKNCAFYVSTSQELYQHALSLL-------LPQLPVTLRLMGVRASHFQPKPQAPPKGQGCLEAYVATGLEAAMAERPPSGSAKRVASPSSLGRPPRLGESGSFSTGP---------------PLLVVDADLLSPAGGGKEATRATV-----TKQVPVYTCPLC-NQRLSVVLSELNRHVDSCL 743
+KAGM+ +E++ +I+ EA+K S+F+ + + + +V +RI+ +MQ K + ++ L ++ + + D+ LA + R + +D+DAF+ +VE RD P LR+ P AVG ++ST+NY AR++GVR+AMP FIA++LCPQL + F+ Y+ V+++ R I DYDP F A SLDEAYL++T ++ +G PT +KP T + AP ALS ED+ + EE R+ + + + A+ VV+EIR RI T +TASAGIA + LAK+ S++NKPNGQ+++ V F++D P+RKV GIG++TE+ L A L + TC L+ KRALL +++ + L S+GL + +R G RK +S ERTF+ +++ E+L + +C+ LA D+ REGLK K +T+KLK+ +F V TRA A VST++E++ A LL PQ P+ LRLMGVR S F + + Q + +++ G P GS + + +PP SF T P + + P+ KE + + ++TCP+C ++ + L NRHVD CL
Sbjct: 23 NKAGME--GLDKEKINKIIMEATKGSRFYENELKKEKQVNQRIENMMQQKSQITTQQLWKA-QLQVDK-LAMELEQNRNLCCTIIHIDMDAFYAAVEMRDNPELRDKPIAVGSMSMLSTSNYHARRFGVRAAMPGFIAKRLCPQLTIVPPNFDKYREVSKEVREILADYDPNFMAMSLDEAYLNITKHLEERQNWPEDKRRYFIKRGN--PTENDKPETVISGAPELNEAALSISPLLFEDSPPHLQQQEPEIPSQAHFEEQRDPQVLQNSVIFGTSADEVVKEIRFRIEQKTSLTASAGIAPNTMLAKVCSDKNKPNGQYQISPNRQAVMDFIKDLPIRKVPGIGKVTEKMLKA-LGIVTCSDLYQKRALLSLLFSETSWHSFLHISLGLGSTQM---------ERDGERKSMSIERTFSEINKAEELYSLCQELCNDLAQDLQREGLKGKTVTIKLKNVNFEVKTRASTVAAVVSTAEEIFAIAKELLKVEIDADYPQ-PLRLRLMGVRISGFSSEEDRKHR-QKSIISFLKVGSHTI----DPVGSVLEKNNQDQVMKPPETSHKQSFFTKKRSEMSWNHQDAFKFEPETIQGFQVSQPSSLSKEKMKENLETSENLDDYQIFTCPICFKEQGRMCLETFNRHVDECL 651
BLAST of EWM30435.1 vs. NCBI_GenBank
Match: gi|669287931|ref|XP_008636830.1| (PREDICTED: DNA polymerase kappa isoform X1 [Corvus brachyrhynchos] >gi|1049438481|ref|XP_017596181.1| PREDICTED: DNA polymerase kappa isoform X1 [Corvus brachyrhynchos] >gi|1049438484|ref|XP_017596182.1| PREDICTED: DNA polymerase kappa isoform X1 [Corvus brachyrhynchos] >gi|1049438487|ref|XP_017596184.1| PREDICTED: DNA polymerase kappa isoform X1 [Corvus brachyrhynchos] >gi|676420345|gb|KFO62920.1| DNA polymerase kappa [Corvus brachyrhynchos]) HSP 1 Score: 318.546 bits (815), Expect = 3.122e-92 Identity = 241/730 (33.01%), Postives = 366/730 (50.14%), Query Frame = 0
Query: 142 DKAGMDEKKRSREEVERIVHEASKNSKFFLAQQRNDLKVQERIQ-VMQSKLNMLSEPLRRSLEAEADRELAAAEKAYRTWRQVCVVVDLDAFFTSVEERDEPALREVPFAVGG-GVISTANYEARKYGVRSAMPLFIARKLCPQLLVRSTRFEAYQTVAEQTRAIFRDYDPRFRAGSLDEAYLDLTAYVHAAVG---DQ-----GGEPPTPEEKPGTPLFAPVT--ALSSGFRGVEDNEGEGGAAWGAMGVDEEEEEVRERAIQEREASYWGVAERVVEEIRRRIHGVTGVTASAGIATSFCLAKMASNENKPNGQFRVG----DVASFLRDAPVRKVSGIGRITERCLVAGLDVQTCFQLWAKRALLYHVYTPQTARWLLCKSVGLDGGGLVDPEEGPGGQRTGRKGISRERTFAALSRKEDLLEKLRLICDSLAADMAREGLKAKNLTLKLKSSDFAVTTRAKNCAFYVSTSQELYQHALSLLLPQL------PVTLRLMGVRASHFQPKPQAPPKGQGCLEAYVATGLEAAMAERPPSGSAKRVASPSSLG----------RPPRLGESGSF----STGPPLLVVDADLLSPAGGGKEATRATVTKQVPVYTCPLC-NQRLSVVLSELNRHVDSCL-----------------RESDPYFL---EKEMPEESKKGDVHR-AGTKPCDAEDKATANKKSRRSENVNCSSRGGKKKKLPPARPDAKPLE 813
+KAGM + +E++ +I+ +A+K S+F+ + + D +V +RI+ +MQ K + ++ L ++ + + D+ + E++ R V +D+DAF+ +VE RD P L+E P AVG ++ST+NY AR++GVR+AMP FIA++LCP L + FE Y V+++ R I +YDP F LDEAYL++T ++ + D+ E T +K G + A +SS EDN + G+ E V + AE VV+EIR RI T +TASAGIA + LAKM S+ NKPNGQ+R+ V FL+D P+RKV GIG++TE+ L A L + TC +L+ +RALL +++ + R L S+GL L E RK +S ERTF+ ++ ED R +C LA D+ +EGLK K +TLKLK+ +F V TRA VST +E++ A LL ++ P+ +RLMGVR S F + + + Q + +++ +G E P S + + +S R R S + S G L D + K+ T + ++TCP+C ++ S L ELNRH+D CL RE+ P FL + E +E +K + + AGT +S NV+ SS +K PD P E
Sbjct: 25 NKAGM--QGLDKEKINKIIMDATKGSRFYENELKKDQQVNQRIEKMMQLKEKVTTQQLLKA-QLQVDKLVIELERS-RNLSSTIVHIDMDAFYAAVEMRDNPELKEKPIAVGSMSMLSTSNYHARRFGVRAAMPGFIAKRLCPHLTIVPLNFEKYSKVSKEVREILAEYDPNFMPMGLDEAYLNITEHLEERLNWPEDRRRFFFNTESTTRIDKDGMNMSAKFNEGEVSSSPVLFEDNTSLMDDGFEQRGLSVENSVV-----------FGTSAEEVVKEIRFRIEQKTQLTASAGIAPNTMLAKMCSDRNKPNGQYRISPERQAVLDFLKDLPIRKVPGIGKVTEKMLKA-LGIVTCSELYQQRALLSLLFSEVSWRNFLDISLGLGSTHLEKDGE--------RKSMSTERTFSEINTAEDQYNLCRELCRDLAQDLQKEGLKGKTVTLKLKNVNFEVKTRASTVLSSVSTEEEIFAVAKDLLGTEIDSVAPHPLRIRLMGVRVSGFLTEEEKKYQ-QRSITSFLKSGKEIGFLRLQPEKSNQEYFTKNSEASHRGSFFDQKRAARQLNSENISPNESRGKQLFHDDKSSANFVEERKKVTDLQNSNAREIFTCPVCFEEQSSNNLEELNRHIDECLSGMHVKDTVEISKNDSSRENTPNFLPQFKNEHVDEREKNNTDQLAGTD---------------QSANVSDSSTNNSTEKFGQIIPDKSPRE 714 The following BLAST results are available for this feature:
BLAST of EWM30435.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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