EWM28250.1, cds2393 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28250.1 vs. NCBI_GenBank
Match: gi|585110595|gb|EWM28250.1| (endoplasmic reticulum-golgi intermediate compartment protein 3 [Nannochloropsis gaditana]) HSP 1 Score: 896.73 bits (2316), Expect = 0.000e+0 Identity = 430/430 (100.00%), Postives = 430/430 (100.00%), Query Frame = 0 Query: 1 MISPNISPKDLTLYERLRRLDYHPKTKDDFKVRTAYGGATSVVALACMIFLFFTELKYSMEKEIVDHMYVNSSRDTRLLFNFNLTFPSVSCSLLSADALDPLGNKQEGVESHVFKTRLDSMGNPIAAKTWHKLGDTFTEEDLLLKHEEDSRAQLEEEEEQEEKLGEEGDGQQVGEDGKPRGRNLKRRKCGDCYGAGEPGQCCNTCAEVKQAYDSKGWAFIGLNVEQCKQENLQVSFGDGAEEGCNIHGSLLLTHDSGNVHFAPGEQLRQSGALNVADLVTFTFLQFNVSHEIHHLSLGEEFPGFRSPLSNQKRSVADGYGMYQYYLKVVPTIYKHLSQPPTVSNQYAVSEHIRHINPGSNRGLPGVWFFYDTSPVHVEFQERRKGLLPFLTSVCAIVGGVFSVFGVVDGVVHNLMKNGLPTGKMGGAPGS 430 MISPNISPKDLTLYERLRRLDYHPKTKDDFKVRTAYGGATSVVALACMIFLFFTELKYSMEKEIVDHMYVNSSRDTRLLFNFNLTFPSVSCSLLSADALDPLGNKQEGVESHVFKTRLDSMGNPIAAKTWHKLGDTFTEEDLLLKHEEDSRAQLEEEEEQEEKLGEEGDGQQVGEDGKPRGRNLKRRKCGDCYGAGEPGQCCNTCAEVKQAYDSKGWAFIGLNVEQCKQENLQVSFGDGAEEGCNIHGSLLLTHDSGNVHFAPGEQLRQSGALNVADLVTFTFLQFNVSHEIHHLSLGEEFPGFRSPLSNQKRSVADGYGMYQYYLKVVPTIYKHLSQPPTVSNQYAVSEHIRHINPGSNRGLPGVWFFYDTSPVHVEFQERRKGLLPFLTSVCAIVGGVFSVFGVVDGVVHNLMKNGLPTGKMGGAPGS Sbjct: 1 MISPNISPKDLTLYERLRRLDYHPKTKDDFKVRTAYGGATSVVALACMIFLFFTELKYSMEKEIVDHMYVNSSRDTRLLFNFNLTFPSVSCSLLSADALDPLGNKQEGVESHVFKTRLDSMGNPIAAKTWHKLGDTFTEEDLLLKHEEDSRAQLEEEEEQEEKLGEEGDGQQVGEDGKPRGRNLKRRKCGDCYGAGEPGQCCNTCAEVKQAYDSKGWAFIGLNVEQCKQENLQVSFGDGAEEGCNIHGSLLLTHDSGNVHFAPGEQLRQSGALNVADLVTFTFLQFNVSHEIHHLSLGEEFPGFRSPLSNQKRSVADGYGMYQYYLKVVPTIYKHLSQPPTVSNQYAVSEHIRHINPGSNRGLPGVWFFYDTSPVHVEFQERRKGLLPFLTSVCAIVGGVFSVFGVVDGVVHNLMKNGLPTGKMGGAPGS 430
BLAST of EWM28250.1 vs. NCBI_GenBank
Match: gi|676381695|ref|XP_009034126.1| (hypothetical protein AURANDRAFT_2571, partial [Aureococcus anophagefferens] >gi|323454843|gb|EGB10712.1| hypothetical protein AURANDRAFT_2571, partial [Aureococcus anophagefferens]) HSP 1 Score: 297.36 bits (760), Expect = 4.685e-94 Identity = 169/410 (41.22%), Postives = 221/410 (53.90%), Query Frame = 0 Query: 13 LYERLRRLDYHPKTKDDFKVRTAYGGATSVVALACMIFLFFTELKYSMEKEIVDHMYVNSSRDTRLLFNFNLTFPSVSCSLLSADALDPLGNKQEGVESHVFKTRLDSMG-----NPIAAKTWHKLGDTFTEEDLLLKHEEDSRAQLEEEEEQEEKLGEEGDGQQVGEDGKPRGRNLKRRKCGDCYGAGEPGQ-CCNTCAEVKQAYDSKGWAFIGLNVEQCKQENLQVSFGDGAEEGCNIHGSLLLTHDSGNVHFAPGEQLRQSGALNVADLVTFTFLQFNVSHEIHHLSLGEEFPGFR----------------SPLSNQKRSVADGYGMYQYYLKVVPTIYKHLSQPPTVSNQYAVSEHIRHINPGSNRGLPGVWFFYDTSPVHVEFQERRKGLLPFLTSVCAIVGGV 400 + +LR +D +PKTKD+F+VRT GG +S+ A+ I L +ELK+S+ D ++VNSS L F L FP +C LL+ DA D G EGV+ HV KTRLD+ G N AA + HK+GDT T E+ L +E KP CGDCYGA + + CC TC +V+ AY +GW F V QC E + + ++EGC+I G+L L SGN H APG L+ SG DLV TF +FNVSH + L G + S L + R++ DGYGM+QYYLKVVPT+YK+L QY+V+EH+RH+ PGS +GLPGV+FFY+ SP+ EF ERR G L LT + AIVGGV Sbjct: 4 VMAKLRNMDMYPKTKDEFRVRTMQGGVSSLFAVVVAIILVRSELKHSLAVSTHDRLFVNSSHGDGLSVRFELEFPRANCELLAIDANDESGQPLEGVQQHVIKTRLDTNGRRVLVNRKAANSVHKVGDTATSEEHLAAPDE----------------------------AKPE------VACGDCYGAQDDERPCCATCDDVRSAYRKRGWTFHEHTVAQCAGELAEAALDLDSDEGCSIKGTLELPAVSGNFHVAPGRHLQTSGLFKGMDLVQLTFDKFNVSHTVKQLRFGPDERSLEPARASRKVVGPDVDLSSQLDGESRTLGDGYGMHQYYLKVVPTVYKNLGGKTRELWQYSVTEHVRHVAPGSGKGLPGVFFFYEVSPLCAEFVERRNGWLALLTGLAAIVGGV 379
BLAST of EWM28250.1 vs. NCBI_GenBank
Match: gi|1173953369|gb|OQS00917.1| (golgi family protein [Achlya hypogyna]) HSP 1 Score: 297.36 bits (760), Expect = 6.902e-94 Identity = 156/408 (38.24%), Postives = 228/408 (55.88%), Query Frame = 0 Query: 12 TLYERLRRLDYHPKTKDDFKVRTAYGGATSVVALACMIFLFFTELKYSMEKEIVDHMYVNSSRDTRLLFNFNLTFPSVSCSLLSADALDPLGNKQEGVESHVFKTRLDSMGNPIAAKTWHKLGDTFTEEDLLLKHEEDSRAQLEEEEEQEEKLGEEGDGQQVGEDGKPRGRNLKRRKCGDCYGAGEPGQCCNTCAEVKQAYDSKGWAFIGL-NVEQCKQENLQVSFGDGAEEGCNIHGSLLLTHDSGNVHFAPGEQLRQSGALNVADLVTFTFLQFNVSHEIHHLSLGEEFPGFRSPLSNQKRSVADG-YGMYQYYLKVVPTIYKHLSQPPTVSNQYAVSEHIRHINPGSNRGLPGVWFFYDTSPVHVEFQERRKGLLPFLTSVCAIVGGVFSVFGVVDGVVHNLMKN 417 TL+ +L+ D +PKT ++FKVRT GG SV A + +LF +EL Y ++ + VD MYV+ R+ L NF++ FP + C ++S + D G Q V ++ K RLD+ G + + W + T T + K +E L + + E CG+CYGAGEPG+CCNTC +VK AY + WA L NV QC ++L+ EGC I G L + +G +FAP ++ QSG L D++ TF F+ SH IH L+ G+E+P ++PL+ + + + G G YQY+LKVV T Y L+ VSNQY+ +EH + P +GLPG+ F Y+ SP+ ++ +KG L FLTSVCAIVGGVF+V G+VD ++NL+ + Sbjct: 3 TLWTKLKGFDANPKTLEEFKVRTTQGGFFSVCAFVLIFYLFVSELNYHLDIDTVDKMYVDGQRNVNLSINFDIEFPRMPCQIVSIEHADLAGRVQLDVIDNIHKVRLDAQGTSLCSDCWALIASTLTGNSIGEKIKESIGGALTNASQLAVQTEAE--------------------SCGNCYGAGEPGECCNTCQDVKNAYIRRNWALPSLHNVVQCMNDDLEAILKGEINEGCRISGHLDVAKVAGKFYFAP-SKIFQSGYLIADDVLDSTFKVFDNSHTIHMLTFGQEYPNMKNPLNKRVKHLGAGKRGAYQYFLKVVSTDYSFLNGAEIVSNQYSATEHFLQMTPTGQKGLPGITFAYEFSPIKFRIEQTQKGWLQFLTSVCAIVGGVFTVMGLVDAAMYNLVSS 389
BLAST of EWM28250.1 vs. NCBI_GenBank
Match: gi|669155406|ref|XP_008613265.1| (hypothetical protein SDRG_09129 [Saprolegnia diclina VS20] >gi|530734900|gb|EQC33142.1| hypothetical protein SDRG_09129 [Saprolegnia diclina VS20]) HSP 1 Score: 295.049 bits (754), Expect = 2.731e-93 Identity = 155/408 (37.99%), Postives = 230/408 (56.37%), Query Frame = 0 Query: 12 TLYERLRRLDYHPKTKDDFKVRTAYGGATSVVALACMIFLFFTELKYSMEKEIVDHMYVNSSRDTRLLFNFNLTFPSVSCSLLSADALDPLGNKQEGVESHVFKTRLDSMGNPIAAKTWHKLGDTFTEEDLLLKHEEDSRAQLEEEEEQEEKLGEEGDGQQVGEDGKPRGRNLKRRKCGDCYGAGEPGQCCNTCAEVKQAYDSKGWAFIGL-NVEQCKQENLQVSFGDGAEEGCNIHGSLLLTHDSGNVHFAPGEQLRQSGALNVADLVTFTFLQFNVSHEIHHLSLGEEFPGFRSPLSNQKRSVADGY-GMYQYYLKVVPTIYKHLSQPPTVSNQYAVSEHIRHINPGSNRGLPGVWFFYDTSPVHVEFQERRKGLLPFLTSVCAIVGGVFSVFGVVDGVVHNLMKN 417 +++++++ D +PKT ++FKVRT GG S+ A M +LFF+EL Y + + VD MYV+ +R+ L NF++ FP + C ++S + D G Q V ++ KTRLD GN I K +G E +L + DG KCG+CYGAG+PG+CCNTC +VK AY + WA L NV QC +L+ +EGC I G L + +G +FAP ++ QSG L D++ TF F+ SH IH L+ G+E+P ++PL+ + + +A+G G YQY+LKVV T Y L+ SNQY+ +EH + P +GLP + F Y+ SP+ ++ +KGL+PFLTSVCAIVGGVF+V G+VD ++N++ + Sbjct: 3 SMWQKIKGFDANPKTLEEFKVRTTQGGLFSLCAFILMAYLFFSELAYHLAVDTVDKMYVDGTRNVNLSINFDIAFPRMPCQIVSIEHADLAGRVQLDVIDNIHKTRLDLQGNAIGEKIKETIGGALV---------------------NESQLAVQSDGS----------------KCGNCYGAGDPGECCNTCEDVKSAYVRRNWALPSLHNVVQCMNADLESILKGDIKEGCRITGHLDVAKVAGKFYFAP-SKIFQSGYLVADDVLDSTFKVFDNSHTIHALTFGQEYPNMKNPLNARVKHLAEGTRGAYQYFLKVVSTDYSFLNGDEIKSNQYSATEHFLEMTPTGQKGLPRITFAYEFSPIKFRIEQTQKGLVPFLTSVCAIVGGVFTVMGLVDAAMYNVISS 372
BLAST of EWM28250.1 vs. NCBI_GenBank
Match: gi|219111025|ref|XP_002177264.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217411799|gb|EEC51727.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 286.96 bits (733), Expect = 1.029e-89 Identity = 156/419 (37.23%), Postives = 239/419 (57.04%), Query Frame = 0 Query: 11 LTLYERLRRLDYHPKTKDDFKVRTAYGGATSVVALACMIFLFFTELKYSMEKEIVDHMYVNSSRDTRLLFNFNLTFPSVSCSLLSADALDPLGNKQE---GVESHVFKTRLDSMGNP----IAAKTWHKLGDTF-TEEDLLLKHEEDSRAQLEEEEEQEEKLGEEGDGQQVGEDGKPRGRNLKRRKCGDCYGAGEPGQCCNTCAEVKQAYDSKGWAFIGLN-VEQCKQENLQVSFGDGAEEGCNIHGSLLLTHDSGNVHFAPGEQLRQS--GALNVADLVTFTFLQFNVSHEIHHLSLGEEFPGFRSPLSNQKRSVADGYGMYQYYLKVVPTIYKHLSQPPTVSNQYAVSEHIRHINPGSNRG------LPGVWFFYDTSPVHVEFQE-RRKGLLPFLTSVCAIVGGVFSVFGVVDGVV 411 + L +RL+R D H +F+V T G S+V L + +L + ++ + + + ++VN+S + + F+++ P V CS LS DA DP G KQ + HV+K R+ + N + ++ +LG T TE+DL +K EE A+ E E CGDCYGAGE G+CC +C +VK+AY +GW+ + V QC++E+ + EGCN+HG + L+ GN+H APG + G +N+ D + +F Q+NVSH+IH L G+++P L + R++ DGYGMYQYY +VVPT Y L+ ++QY+V+EH+RH++PGSNRG +PG++FFY+ SP+HV+ E +KG + FLTSVCAIVGGV ++ G++D V+ Sbjct: 1 MDLKDRLKRFDTHSPVSKEFRVYTVQGAVLSIVTLVFVGYLVTADFFFNFQVTLQEKVHVNASSPSGIELEFDVSLPDVPCSKLSIDANDPNGQKQSLHLDTDHHVWKHRITLLPNGHRQLLGERSKLELGSTLLTEKDLEVKAEELQNAKDNSESRTEMT------------------------PCGDCYGAGEEGECCKSCEDVKRAYKRRGWSLRDTSGVSQCRRES---GIAEAEGEGCNVHGVVALSSGGGNLHIAPGRDTEANFPGGMNIFDALLQSFHQWNVSHQIHKLRFGKDYPAGVYQLDGETRTITDGYGMYQYYFQVVPTRYTFLNGTTIQTHQYSVTEHLRHVSPGSNRGYSLNSRMPGIFFFYEVSPLHVDIMEVYQKGWIAFLTSVCAIVGGVVTIAGLIDHVI 392
BLAST of EWM28250.1 vs. NCBI_GenBank
Match: gi|1210519469|dbj|GAX21593.1| (hypothetical protein FisN_29Hh026 [Fistulifera solaris]) HSP 1 Score: 285.419 bits (729), Expect = 3.989e-89 Identity = 158/411 (38.44%), Postives = 230/411 (55.96%), Query Frame = 0 Query: 12 TLYERLRRLDYHPKTKDDFKVRTAYGGATSVVALACMIFLFFTELKYSMEKEIVDHMYVNSSRDTRLLFNFNLTFPSVSCSLLSADALDPLGNKQE---GVESHVFKTRLD-----SMGNPIAAKTWHKLGDTFTEEDLLLKHEEDSRAQLEEEEEQEEKLGEEGDGQQVGEDGKPRGRNLKRRKCGDCYGAGEPGQCCNTCAEVKQAYDSKGWAFIGLN-VEQCKQENLQVSFGDGAEEGCNIHGSLLLTHDSGNVHFAPGEQ----LRQSGALNVADLVTFTFLQFNVSHEIHHLSLGEEFPGFRSPLSNQKRSVADGYGMYQYYLKVVPTIYKHLSQPPTVSNQYAVSEHIRHINPGSNRGLPGVWFFYDTSPVHVEFQE-RRKGLLPFLTSVCAIVGGVFSVFGVVD 408 TL ERL+++D H ++F+V T G SV + +++L +TE+ ++ + + ++VN++ L F++T SV CS LS DA DP G E HV+K R++ + N I ++ +LG T L + E E K+ E + Q D C CYGAG+ +CCNTC +V++AY KGWA L+ + QC+Q +G EGCN+HG + L GN+H APGE L + ++++ DL+ F ++NV+H IH L G E P L QKR V D +GMYQYYL+++PT YK + +NQY+V+EH+RH+ PGSNRGLPGV+FFY+ SP+HVE E RKG + F+TSVCA+VGGV + G++D Sbjct: 4 TLKERLKKIDTHSSVSNEFRVYTVSGAVLSVTTVCFILYLVWTEITFNFQTTVQQRVHVNATSPRGLEMEFDITLHSVKCSQLSIDAQDPSGQSMSLHLDKEHHVWKHRVEIADDGAKFNVIGSRNKIELGST-----------------LLDMETVEYKIAENSELMQDENDND----------CLSCYGAGDEDECCNTCEDVQRAYKRKGWALPDLSTIAQCRQSP---QTDEGEHEGCNVHGKVALDSGGGNLHLAPGEDMANGLTRPASVSLFDLLLLKFHEWNVTHTIHKLRFGPEHPDAIYQLEGQKRVVKDSHGMYQYYLQIIPTQYKFQNGTTIQTNQYSVTEHLRHVPPGSNRGLPGVFFFYEVSPLHVEITEGYRKGWIAFVTSVCAVVGGVVTTMGLLD 384
BLAST of EWM28250.1 vs. NCBI_GenBank
Match: gi|1072231880|gb|OEU16612.1| (DUF1692-domain-containing protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 285.034 bits (728), Expect = 5.014e-89 Identity = 157/414 (37.92%), Postives = 233/414 (56.28%), Query Frame = 0 Query: 15 ERLRRLDYHPKTKDDFKVRTAYGGATSVVALACMIFLFFTELKYSMEKEIVDHMYVNSSRDTRLLFNFNLTFPSVSCSLLSADALDPLGNKQE---GVESHVFKTRL--DSMGNP--IAAKTWHKLGDTFTEEDL--LLKHEEDSRAQLEEEEEQEEKLGEEGDGQQVGEDGKPRGRNLKRRKCGDCYGAGEPGQCCNTCAEVKQAYDSKGWAFIGLN-VEQCKQENLQVSFGDGAEEGCNIHGSLLLTHDSGNVHFAPGEQLRQ----SGALNVADLVTFTFLQFNVSHEIHHLSLGEEFPGFRSPLSNQKRSVADGYGMYQYYLKVVPTIYKHLSQPPTVSNQYAVSEHIRHINPGSNRGLPGVWFFYDTSPVHVEF-QERRKGLLPFLTSVCAIVGGVFSVFGVVDGVVHN 413 E LR+ D H +F+V T +G SVV + + +L FTE+ Y+ + + + ++VN++ T L F+++ P V CS+L DA DP G Q HV+K R+ D G + K + G T EE L L + ++EEE K CG C+GAGE G+CC+TC +VK+AY KGW + ++QC++E V +G EGCN+HG + L G+ H APG ++ S ++ +++ TF QFN++H +H + G+ FPG ++ L R +ADGYGMYQYY K+VPT+ K + +NQY+V+EH+RH+NPG RGLPGV+FFY+ SP+HVE ++ RKG L F TSVCAIVGGV + G++D ++++ Sbjct: 5 ENLRKFDNHSSVSKEFRVYTFHGAVLSVVTVIAITYLVFTEMGYNFKLIMTERVHVNATSPTGLDVEFDISLPLVPCSVLKIDANDPSGQTQSLHLDQRHHVWKHRIKVDDEGEIEFLGDKRKLEQGSTLKEEHLEELFDTMNKEKGVTDDEEE-------------------------KTVDCGSCFGAGEEGECCDTCDDVKRAYTRKGWHIQNPDEIDQCRKEKKNVKEDEG--EGCNVHGLVALDSGGGSFHLAPGREMDHAMDPSDIGSIFEMLLSTFEQFNMTHTVHKIRFGDAFPGNKNQLDGVNRVIADGYGMYQYYFKIVPTLVKFKNGTSIQTNQYSVTEHLRHVNPGGGRGLPGVFFFYEISPLHVEIVEDYRKGYLGFFTSVCAIVGGVVTTMGLLDQILYS 391
BLAST of EWM28250.1 vs. NCBI_GenBank
Match: gi|1210526334|dbj|GAX14822.1| (hypothetical protein FisN_29Lh026 [Fistulifera solaris]) HSP 1 Score: 282.722 bits (722), Expect = 3.802e-88 Identity = 157/411 (38.20%), Postives = 230/411 (55.96%), Query Frame = 0 Query: 12 TLYERLRRLDYHPKTKDDFKVRTAYGGATSVVALACMIFLFFTELKYSMEKEIVDHMYVNSSRDTRLLFNFNLTFPSVSCSLLSADALDPLGNKQE---GVESHVFKTRLD-----SMGNPIAAKTWHKLGDTFTEEDLLLKHEEDSRAQLEEEEEQEEKLGEEGDGQQVGEDGKPRGRNLKRRKCGDCYGAGEPGQCCNTCAEVKQAYDSKGWAFIGLNV-EQCKQENLQVSFGDGAEEGCNIHGSLLLTHDSGNVHFAPGEQ----LRQSGALNVADLVTFTFLQFNVSHEIHHLSLGEEFPGFRSPLSNQKRSVADGYGMYQYYLKVVPTIYKHLSQPPTVSNQYAVSEHIRHINPGSNRGLPGVWFFYDTSPVHVEFQE-RRKGLLPFLTSVCAIVGGVFSVFGVVD 408 TL ERL+++D H ++F+V T G SV + +++L +TE+ ++ + I ++VN++ L F++T SV CS LS DA DP G E HV+K R++ + N I ++ +LG T L + E E K+ E + + DG C CYGAG+ +CCNTC ++++AY KGWA L+ QC+Q +G EGCN+HG + L GN+H APGE L + ++++ DL+ F ++NV+H IH L G E P L Q+R V D +GMYQYYL+++PT YK + +NQY+V+EH+RH+ PGSNRGLPGV+FFY+ SP+HVE E RKG + F+TSVCA+VGGV + G++D Sbjct: 4 TLKERLKKIDTHSSVSNEFRVYTVSGAVLSVTTVCFILYLVWTEITFNFQTTIQQRVHVNATSPRGLEMEFDITLHSVKCSQLSIDAQDPSGQSMSLHLDKEHHVWKHRVELADNGAKFNVIGSRNKIELGST-----------------LLDMETIEYKIAENTELIRDDNDGD----------CLSCYGAGDEDECCNTCEDIQRAYKRKGWALPDLSTFAQCRQSP---QADEGEHEGCNVHGKVALDSGGGNLHLAPGEDMTNGLTRPASVSLFDLLLLKFHEWNVTHTIHKLRFGPEHPDAIYQLEGQRRVVKDSHGMYQYYLQIIPTQYKFQNGTTIQTNQYSVTEHLRHVPPGSNRGLPGVFFFYEVSPLHVEITEGYRKGWIAFVTSVCAVVGGVVTTMGLLD 384
BLAST of EWM28250.1 vs. NCBI_GenBank
Match: gi|405966014|gb|EKC31342.1| (Endoplasmic reticulum-Golgi intermediate compartment protein 3 [Crassostrea gigas]) HSP 1 Score: 279.256 bits (713), Expect = 9.138e-87 Identity = 149/405 (36.79%), Postives = 234/405 (57.78%), Query Frame = 0 Query: 13 LYERLRRLDYHPKTKDDFKVRTAYGGATSVVALACMIFLFFTELKYSMEKEIVDHMYVNSSRDTRLLFNFNLTFPSVSCSLLSADALDPLGNKQEGVESHVFKTRLDSMGNPIAAKTWHKLGDTFTEEDLLLKHEEDSRAQLEEEEEQEEKLGEEGDGQQVGEDGKPRGRNLKRRKCGDCYGAGEPG--QCCNTCAEVKQAYDSKGWAFIGLN-VEQCKQENLQVSFGDGAEEGCNIHGSLLLTHDSGNVHFAPGEQLRQSGALNVADLVTFTFLQFNVSHEIHHLSLGEEFPGFRSPLSNQKRSVADGYGMYQYYLKVVPTIYKHLSQPPTVSNQYAVSEHIRHINPG-SNRGLPGVWFFYDTSPVHVEFQERRKGLLPFLTSVCAIVGGVFSVFGVVDGVVHN 413 YERLR+ D +PKT +DF+V+T G +V++ M+ LF +EL Y + K++ ++V+++R +L N ++ FP V C+ LS DA+D G +Q V+ H+FK RL++ G K+ DT + E+E E + E GD + + + L +C CYGA E G +CCNTC +V++AY KGWAF +EQC +E +EGC ++G L + GN HFAPG+ +Q ++V DL F +FN+SH I HLS G+++PG +PL + D M+QYY+KVVPT Y + +NQY+V++H + + G + GLPGV+F Y+ SP+ V++ E+++ + FLT VCAI+GG+F+V G++D ++++ Sbjct: 6 FYERLRQFDAYPKTLEDFRVKTFGGALVTVISSLLMVILFISELNYYLTKDVQPELFVDTTRGQKLRINIDIDFPKVPCAYLSIDAMDVSGEQQLDVDHHLFKQRLNADGE--------KIKDT----------------EPEKEGTMYEPIFELGDKSKDAVEAVT--KKLDPDRCESCYGA-ETGDLKCCNTCEDVREAYRKKGWAFNSPEGIEQCNREGWTAKMKAQQKEGCQVYGYLEVNKVQGNFHFAPGKSFQQH-HVHVHDLQAFGGQKFNLSHAIRHLSFGQDYPGIINPLDQTSQISEDEQTMFQYYVKVVPTTYVDVKGKTLYTNQYSVNKHSKTVGNGMGDSGLPGVFFIYELSPMMVKYTEKQRSFMHFLTGVCAIIGGIFTVAGLIDSMIYH 382
BLAST of EWM28250.1 vs. NCBI_GenBank
Match: gi|762103987|ref|XP_011434519.1| (PREDICTED: endoplasmic reticulum-Golgi intermediate compartment protein 3 [Crassostrea gigas]) HSP 1 Score: 277.715 bits (709), Expect = 2.793e-86 Identity = 145/405 (35.80%), Postives = 233/405 (57.53%), Query Frame = 0 Query: 13 LYERLRRLDYHPKTKDDFKVRTAYGGATSVVALACMIFLFFTELKYSMEKEIVDHMYVNSSRDTRLLFNFNLTFPSVSCSLLSADALDPLGNKQEGVESHVFKTRLDSMGNPIAAKTWHKLGDTFTEEDLLLKHEEDSRAQLEEEEEQEEKLGEEGDGQQVGEDGKPRGRNLKRRKCGDCYGAGEPG--QCCNTCAEVKQAYDSKGWAFIGLN-VEQCKQENLQVSFGDGAEEGCNIHGSLLLTHDSGNVHFAPGEQLRQSGALNVADLVTFTFLQFNVSHEIHHLSLGEEFPGFRSPLSNQKRSVADGYGMYQYYLKVVPTIYKHLSQPPTVSNQYAVSEHIRHINPG-SNRGLPGVWFFYDTSPVHVEFQERRKGLLPFLTSVCAIVGGVFSVFGVVDGVVHN 413 YERLR+ D +PKT +DF+V+T G +V++ M+ LF +EL Y + K++ ++V+++R +L N ++ FP V C+ LS DA+D G +Q V+ H+FK RL++ G I ++ E ++E+LG++ + + + L +C CYGA E G +CCNTC +V++AY KGWAF +EQC +E +EGC ++G L + GN HFAPG+ +Q ++V DL F +FN+SH I HLS G+++PG +PL + D M+QYY+KVVPT Y + +NQY+V++H + + G + GLPGV+F Y+ SP+ V++ E+++ + FLT VCAI+GG+F+V G++D ++++ Sbjct: 6 FYERLRQFDAYPKTLEDFRVKTFGGALVTVISSLLMVILFISELNYYLTKDVQPELFVDTTRGQKLRINIDIDFPKVPCAYLSIDAMDVSGEQQLDVDHHLFKQRLNADGEKI-----------------------------KDTEPEKEELGDKSK-----DAVEAVTKKLDPDRCESCYGA-ETGDLKCCNTCEDVREAYRKKGWAFNSPEGIEQCNREGWTAKMKAQQKEGCQVYGYLEVNKVQGNFHFAPGKSFQQH-HVHVHDLQAFGGQKFNLSHAIRHLSFGQDYPGIINPLDQTSQISEDEQTMFQYYVKVVPTTYVDVKGKTLYTNQYSVNKHSKTVGNGMGDSGLPGVFFIYELSPMMVKYTEKQRSFMHFLTGVCAIIGGIFTVAGLIDSMIYH 374 The following BLAST results are available for this feature:
BLAST of EWM28250.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|