EWM28267.1, cds2381 (CDS) Nannochloropsis gaditana

Overview
NameEWM28267.1
Unique Namecds2381
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:267349..267573 +
Alignment locationCM002459.1:267779..269605 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM28267.1
Productgtp-binding protein
Orig transcript idgnl|cribi|Naga_100004g20.9198.mrna
GenePEngA
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:267349..267573 +
CM002459.1supercontigCM002459.1:267779..269605 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0016043cellular component organization
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0005525GTP binding
Vocabulary: INTERPRO
TermDefinition
IPR031166G_ENGA
IPR015946KH_dom-like_a/b
IPR016484GTP-bd_EngA
IPR027417P-loop_NTPase
IPR005225Small_GTP-bd_dom
IPR006073GTP_binding_domain
Homology
BLAST of EWM28267.1 vs. NCBI_GenBank
Match: gi|585110612|gb|EWM28267.1| (gtp-binding protein [Nannochloropsis gaditana])

HSP 1 Score: 1409.82 bits (3648), Expect = 0.000e+0
Identity = 683/683 (100.00%), Postives = 683/683 (100.00%), Query Frame = 0
Query:    1 MHFCQPSVPPSGSDNWRLRPRSRPGMAHRQPFHVRFFISVAACAAWTGRYSSVQGFAPPARPLHTKIEGMHCHVQPLSTAQSFSVHREQPHLDRTPKRKLTLLTMARGNSGGRSTGKGKQRGRKDTTAPGSPPSSDSSFPSSTRGDFEEEGSGDIDDDVDALMDDEGDDYVFNPADFPLLEGEIDFFGDLDGLEETEESRVLPGAQPLDTSGGITPKKKAVKLPVLAVIGRPNVGKSTIVNRLCRTMSTEPDAIVYDYEGVTRDRIYRKAEWNGRVFEVVDTGGLIFDEDQDNLFAPQIREQALLALEESVAAILVVDGQVGVTTLDEEVAKFLRLQKNKPIFVAVNKCETPNMGEAMASMFWKLGLGEPFPVSGLHGTGVAEMLERMLPHIYEVEEAEREEAIKVAIVGRPNVGKSSLLNRLYGKERAIVSDVAGTTRDAVDALVEVNGKSYRFIDTAGIRRRKKVEYGNEFLMVNRALKAVRRADVVLLVVDVVEGINDQDKILAQRIAEDGRACVIVANKWDAVEKDDRTFNEAVVYVKEELFAVSWADVLFTSALTGQRCHKIFDAIDKASAAHRQRVKTSILNEVLGEALVWQRPPTVKSSQQGRVYYCNQVATEPPSVVVFCNNPKLFPDSYKRYLDRKFRESLDLTGTPIRWYFRGKKLRQLAKQGSPVPYGMPGS 683
            MHFCQPSVPPSGSDNWRLRPRSRPGMAHRQPFHVRFFISVAACAAWTGRYSSVQGFAPPARPLHTKIEGMHCHVQPLSTAQSFSVHREQPHLDRTPKRKLTLLTMARGNSGGRSTGKGKQRGRKDTTAPGSPPSSDSSFPSSTRGDFEEEGSGDIDDDVDALMDDEGDDYVFNPADFPLLEGEIDFFGDLDGLEETEESRVLPGAQPLDTSGGITPKKKAVKLPVLAVIGRPNVGKSTIVNRLCRTMSTEPDAIVYDYEGVTRDRIYRKAEWNGRVFEVVDTGGLIFDEDQDNLFAPQIREQALLALEESVAAILVVDGQVGVTTLDEEVAKFLRLQKNKPIFVAVNKCETPNMGEAMASMFWKLGLGEPFPVSGLHGTGVAEMLERMLPHIYEVEEAEREEAIKVAIVGRPNVGKSSLLNRLYGKERAIVSDVAGTTRDAVDALVEVNGKSYRFIDTAGIRRRKKVEYGNEFLMVNRALKAVRRADVVLLVVDVVEGINDQDKILAQRIAEDGRACVIVANKWDAVEKDDRTFNEAVVYVKEELFAVSWADVLFTSALTGQRCHKIFDAIDKASAAHRQRVKTSILNEVLGEALVWQRPPTVKSSQQGRVYYCNQVATEPPSVVVFCNNPKLFPDSYKRYLDRKFRESLDLTGTPIRWYFRGKKLRQLAKQGSPVPYGMPGS
Sbjct:    1 MHFCQPSVPPSGSDNWRLRPRSRPGMAHRQPFHVRFFISVAACAAWTGRYSSVQGFAPPARPLHTKIEGMHCHVQPLSTAQSFSVHREQPHLDRTPKRKLTLLTMARGNSGGRSTGKGKQRGRKDTTAPGSPPSSDSSFPSSTRGDFEEEGSGDIDDDVDALMDDEGDDYVFNPADFPLLEGEIDFFGDLDGLEETEESRVLPGAQPLDTSGGITPKKKAVKLPVLAVIGRPNVGKSTIVNRLCRTMSTEPDAIVYDYEGVTRDRIYRKAEWNGRVFEVVDTGGLIFDEDQDNLFAPQIREQALLALEESVAAILVVDGQVGVTTLDEEVAKFLRLQKNKPIFVAVNKCETPNMGEAMASMFWKLGLGEPFPVSGLHGTGVAEMLERMLPHIYEVEEAEREEAIKVAIVGRPNVGKSSLLNRLYGKERAIVSDVAGTTRDAVDALVEVNGKSYRFIDTAGIRRRKKVEYGNEFLMVNRALKAVRRADVVLLVVDVVEGINDQDKILAQRIAEDGRACVIVANKWDAVEKDDRTFNEAVVYVKEELFAVSWADVLFTSALTGQRCHKIFDAIDKASAAHRQRVKTSILNEVLGEALVWQRPPTVKSSQQGRVYYCNQVATEPPSVVVFCNNPKLFPDSYKRYLDRKFRESLDLTGTPIRWYFRGKKLRQLAKQGSPVPYGMPGS 683          
BLAST of EWM28267.1 vs. NCBI_GenBank
Match: gi|299473466|emb|CBN77863.1| (PEngA, plastid EngA GTPase [Ectocarpus siliculosus])

HSP 1 Score: 589.726 bits (1519), Expect = 0.000e+0
Identity = 284/463 (61.34%), Postives = 366/463 (79.05%), Query Frame = 0
Query:  222 KLPVLAVIGRPNVGKSTIVNRLCRTMSTEPDAIVYDYEGVTRDRIYRKAEWNGRVFEVVDTGGLIFDEDQDNLFAPQIREQALLALEESVAAILVVDGQVGVTTLDEEVAKFLRLQKNKPIFVAVNKCETPNMGEAMASMFWKLGLGEPFPVSGLHGTGVAEMLERMLPHIYEVEE-AEREEAIKVAIVGRPNVGKSSLLNRLYGKERAIVSDVAGTTRDAVDALVEVNGKSYRFIDTAGIRRRKKVEYGNEFLMVNRALKAVRRADVVLLVVDVVEGINDQDKILAQRIAEDGRACVIVANKWDAVE-KDDRTFNEAVVYVKEELFAVSWADVLFTSALTGQRCHKIFDAIDKASAAHRQRVKTSILNEVLGEALVWQRPPTVKSS--QQGRVYYCNQVATEPPSVVVFCNNPKLFPDSYKRYLDRKFRESLDLTGTPIRWYFRGKKLRQLAKQG--SPVPY 678
            + PV+AVIGRPNVGKST+VNRL +    +  +IV+D  GVTRDR Y++A + G+ F+VVDTGGL+FD+   ++FA +IR+QAL+ALEE+ A I+VVDG VG   LD+E+A+FLR QK  P+ +AVNKCE+   GE   + FW LGLGEP+P+SGLHG G+ +M++ +  H+YEV+E AE E+ I VAIVGRPNVGKSSLLNRL+G+ R+IVSDV GTTRD++DA+ E  G++YR +DTAGIRR+ KV+YGNEF MVNRA KA+RRADVVLL+VDV  GI DQD++LA RI  DGRACV+V NKWD VE KDD ++N+AV Y ++ L  V WA+V FTSA TGQRC K+FD +D+ +  HR+RVKTS+LNEVL +A++WQ PP+ KSS   QG++YYCNQ+AT PP+V VFCNNPKLF D+YKRYLDRKFRE L L  TPIR+ +RGK+LR++ +    +P PY
Sbjct:  218 RFPVVAVIGRPNVGKSTVVNRLAKRF--KDGSIVFDESGVTRDRTYKRAWYCGKDFDVVDTGGLVFDDKGGDVFAKEIRQQALIALEEATAVIMVVDGIVGCNVLDQEIARFLRQQK-VPVVLAVNKCESQKYGEIQTAEFWCLGLGEPWPISGLHGDGIYDMMDNVAEHLYEVDENAEEEDNINVAIVGRPNVGKSSLLNRLFGETRSIVSDVPGTTRDSIDAMFERGGRTYRLVDTAGIRRKGKVDYGNEFFMVNRAFKAIRRADVVLLMVDVEAGITDQDRVLADRIQSDGRACVVVCNKWDLVEDKDDSSYNKAVEYARQMLSPVKWAEVCFTSAKTGQRCTKLFDLVDEVAVQHRRRVKTSVLNEVLRDAVLWQAPPSKKSSGASQGKIYYCNQIATRPPTVAVFCNNPKLFGDNYKRYLDRKFREQLGLKSTPIRFLWRGKRLRRMEQDNRRNPKPY 677          
BLAST of EWM28267.1 vs. NCBI_GenBank
Match: gi|219109543|ref|XP_002176526.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217411061|gb|EEC50989.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 547.354 bits (1409), Expect = 0.000e+0
Identity = 278/525 (52.95%), Postives = 370/525 (70.48%), Query Frame = 0
Query:  166 EGDDYVFNPADFPLLEGEIDFFGDLDGLEE---TEESRVLPGAQPLDTSGGITPKKKAVKLPVLAVIGRPNVGKSTIVNRLCRTMSTEPDAIVYDYEGVTRDRIYRKAEWNGRVFEVVDTGGLIFDEDQDNLFAPQIREQALLALEESVAAILVVDGQVGVTTLDEEVAKFLRLQKNKPIFVAVNKCETPNMGEAMASMFWKLGLGEPFPVSGLHGTGVAEMLERMLPHIYE---VEEAEREEAIKVAIVGRPNVGKSSLLNRLYGKERAIVSDVAGTTRDAVDALVEVN--------GKSYRFIDTAGIRRRKKVEYGNEFLMVNRALKAVRRADVVLLVVDVVEGINDQDKILAQRIAEDGRACVIVANKWDA-VEKDDRTFNEAVVYVKEELFAVSWADVLFTSALTGQRCHKIFDAIDKASAAHRQRVKTSILNEVLGEALVWQRPPTVKSSQQGRVYYCNQVATEPPSVVVFCNNPKLFPDSYKRYLDRKFRESLD-LTGTPIRWYFRGKKLRQLAKQGS 674
            + + + F P   P+    I     LD + E    E S   P  QP      I   ++  K P++A++GRPNVGKS +VNR+  + S    AIV D  G+TRDR YR AE+ G  F +VDTGGL+FD+D+  LFA +IREQA++A+EES A I+VVDGQ G+T +D  +A+FLR + + P+ VAVNKCE+   G   A+ FW LGLGEPFPVS LHG G AE++E +   I E    +  +R E I +AI+GRPNVGKSSLLN ++G  RAIVS++AGTTRD++DA++E             YRF+DTAGIRR+ KV++G EF MVNRAL+A+RRADVVLL++D   G+ +QD++LAQ+IA+DGRACVIV NKWDA V+KD  T++++V Y +EEL  + WA +LF SA TGQR  KI+ AID A  AHR+R+ T+ILNEVL +A++WQ PPT ++  Q ++YYCNQV+T PP+VVVFCN+PKL  D+Y+RYLDRKFRESLD    TPIRW FRG+++R + +  S
Sbjct:   17 QANSFTFRP--LPVTRPVIGLLATLDRVNEKSTVEPSSGDPQLQP------IRRLRQNKKEPLIAIVGRPNVGKSALVNRIAGSQSG--GAIVADESGITRDRTYRPAEFLGERFMIVDTGGLVFDDDESTLFAKEIREQAMVAIEESAAVIMVVDGQTGLTGMDLMIAEFLRKEVDIPVHVAVNKCESEKTGAMSAADFWGLGLGEPFPVSALHGVGTAEIMETIFDSIAEKKTFDAEDRPEEINIAIIGRPNVGKSSLLNSIFGDTRAIVSEMAGTTRDSIDAVMERPPPPGSDDLSTIYRFVDTAGIRRKGKVDFGPEFFMVNRALRAIRRADVVLLILDATSGVAEQDRVLAQKIADDGRACVIVCNKWDAVVDKDSTTYDKSVQYFREELPMIRWAPILFISAATGQRVGKIYSAIDGAIEAHRKRISTAILNEVLRDAILWQPPPTRRNGSQAKIYYCNQVSTRPPTVVVFCNDPKLVNDNYRRYLDRKFRESLDGFEATPIRWIFRGRRVRDVMRNRS 531          
BLAST of EWM28267.1 vs. NCBI_GenBank
Match: gi|1072224104|gb|OEU08856.1| (GTP-binding protein EngA [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 546.584 bits (1407), Expect = 0.000e+0
Identity = 266/479 (55.53%), Postives = 353/479 (73.70%), Query Frame = 0
Query:  222 KLPVLAVIGRPNVGKSTIVNRLCRTMSTEPDAIVYDYEGVTRDRIYRKAEWNGRVFEVVDTGGLIFDEDQDNLFAPQIREQALLALEESVAAILVVDGQVGVTTLDEEVAKFLR---LQKNKPIFVAVNKCETPNMGEAMASMFWKLGLGEPFPVSGLHGTGVAEMLERMLPHIYE-----------------VEEAEREEAIKVAIVGRPNVGKSSLLNRLYGKERAIVSDVAGTTRDAVDALVEVNGKS-------YRFIDTAGIRRRKKVEYGNEFLMVNRALKAVRRADVVLLVVDVVEGINDQDKILAQRIAEDGRACVIVANKWDAV-EKDDRTFNEAVVYVKEELFAVSWADVLFTSALTGQRCHKIFDAIDKASAAHRQRVKTSILNEVLGEALVWQRPPTVKSSQQGRVYYCNQVATEPPSVVVFCNNPKLFPDSYKRYLDRKFRESLD-LTGTPIRWYFRGKKLRQLAK 671
            K P++A++GRPNVGKS  VNR+C T +    AIV D EG+TRDR YR A + G  F+VVDTGGL+F +D+  LFA +IREQA++A++ES   +LVVDG++G+T +D+++A+FLR   L +N P+ +AVNKCE+  +G   A+ FW LGLGEP PVS LHG G AE+LER+   I +                  +E ER E I VAIVGRPNVGKSSLLN L+G +RAIVS +AGTTRD++DA++E  G +       YRF+DTAGIRRR KVEYG EF MVNRAL+A+RRADVVLLV+D   G+ +QD+ILAQ+IA+DGRAC I+ NKWDAV +KD  T++++V Y++ E+  + WA +LF SA TGQR  KI++ +D A  AHR+R+ TS+LNEVL +A++WQ PP  ++  Q ++YYCNQV+T PP++VVFCN+PKL  D+YKRYLDRKFRESLD    TP+RW FRG++ R + +
Sbjct:   18 KEPLVAILGRPNVGKSAFVNRICGTQNG--GAIVADEEGITRDRTYRDANFLGENFQVVDTGGLVFADDESTLFAREIREQAMVAIDESSGVVLVVDGKIGMTAMDQQIAEFLRKDVLSRNLPVILAVNKCESETVGALNAAEFWNLGLGEPIPVSALHGVGTAEVLERLFEEIKQKQSAALPGFGTKDALAAFDELERPEEINVAIVGRPNVGKSSLLNALFGDQRAIVSKMAGTTRDSIDAVMERPGDNEGDLPTIYRFVDTAGIRRRAKVEYGPEFFMVNRALRAIRRADVVLLVMDATAGVTEQDRILAQKIADDGRACAIICNKWDAVVDKDSSTYDKSVKYIRAEMPQIRWAPILFISAETGQRVGKIYNVVDDAIGAHRKRISTSVLNEVLRDAILWQPPPARRNGAQAKIYYCNQVSTRPPTIVVFCNDPKLVNDNYKRYLDRKFRESLDGFEATPVRWIFRGRRARDIMR 494          
BLAST of EWM28267.1 vs. NCBI_GenBank
Match: gi|493721258|ref|WP_006670724.1| (MULTISPECIES: ribosome biogenesis GTPase Der [Arthrospira] >gi|209491626|gb|EDZ91995.1| small GTP-binding protein [Arthrospira maxima CS-328])

HSP 1 Score: 535.413 bits (1378), Expect = 0.000e+0
Identity = 255/451 (56.54%), Postives = 335/451 (74.28%), Query Frame = 0
Query:  224 PVLAVIGRPNVGKSTIVNRLCRTMSTEPDAIVYDYEGVTRDRIYRKAEWNGRVFEVVDTGGLIFDEDQDNLFAPQIREQALLALEESVAAILVVDGQVGVTTLDEEVAKFLRLQKNKPIFVAVNKCETPNMGEAMASMFWKLGLGEPFPVSGLHGTGVAEMLERMLPHIYEVEEAEREEAIKVAIVGRPNVGKSSLLNRLYGKERAIVSDVAGTTRDAVDALVEVNGKSYRFIDTAGIRRRKKVEYGNEFLMVNRALKAVRRADVVLLVVDVVEGINDQDKILAQRIAEDGRACVIVANKWDAVEKDDRTFNEAVVYVKEELFAVSWADVLFTSALTGQRCHKIFDAIDKASAAHRQRVKTSILNEVLGEALVWQRPPTVKSSQQGRVYYCNQVATEPPSVVVFCNNPKLFPDSYKRYLDRKFRESLDLTGTPIRWYFRGKKLRQLAKQGS 674
            P++A+IGRPNVGKST+VNRL +T     DAIV+D  G+TRDR YR A W  R F VVDTGGL+FD+D +  F P IREQAL+AL E+ AAILVVDGQ G T  DE +A +LR QK  PI +AVNKCE+P  G   A+ FW+LGLG PFP+S +HG+G  E+L+ ++ ++    + E  E ++VAIVGRPNVGKSSLLN   G+ERAIVS ++GTTRDA+D +VE NG +YR +DTAGIRR+K VEYG EF  +NRA KA+RRADVVL V+D VEG+ DQD+ LA RI++DGRACVIV NKWDAVEKD  T  E    ++  L+ + WAD++F SA+TGQR  KIF  +DKA+  +R+RV TS++NEV+ EA+ W  PPT +  +QG++YY  QV + PP++V+F N+PK F D+Y+RY++ +FR+ L   GTPIR  +RGK +R++ +  S
Sbjct:    4 PIVAIIGRPNVGKSTLVNRLTQTQ----DAIVHDQPGMTRDRTYRSAYWQDREFTVVDTGGLVFDDDTE--FLPLIREQALMALAEATAAILVVDGQTGPTGGDEAIASWLRQQK-VPILLAVNKCESPTQGLTQAAQFWELGLGNPFPISSIHGSGTGELLDALIENLPASTDNEDSEELRVAIVGRPNVGKSSLLNTFLGQERAIVSPISGTTRDAIDTIVEHNGNTYRLVDTAGIRRKKHVEYGAEFFGINRAFKAIRRADVVLFVIDAVEGVTDQDQKLAGRISDDGRACVIVVNKWDAVEKDSYTILEYEKVMRSRLYFLDWADMIFVSAMTGQRVEKIFKLVDKAAEENRRRVSTSVINEVIEEAVRWHSPPTSRQGRQGKIYYGTQVTSSPPTIVLFVNDPKRFGDNYRRYMESQFRQQLGFAGTPIRLLWRGKAMREVERNSS 447          
BLAST of EWM28267.1 vs. NCBI_GenBank
Match: gi|223994975|ref|XP_002287171.1| (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >gi|220976287|gb|EED94614.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 534.258 bits (1375), Expect = 0.000e+0
Identity = 263/462 (56.93%), Postives = 346/462 (74.89%), Query Frame = 0
Query:  224 PVLAVIGRPNVGKSTIVNRLCRTMSTEPDAIVYDYEGVTRDRIYRKAEWNGRVFEVVDTGGLIFDEDQDNLFAPQIREQALLALEESVAAILVVDGQVGVTTLDEEVAKFLR--LQKNKPIFVAVNKCETPNMGEAMASMFWKLGLGEPFPVSGLHGTGVAEMLERMLPHIYEVEEAE--REEAIKVAIVGRPNVGKSSLLNRLYGKERAIVSDVAGTTRDAVDALVEVNGKS-------YRFIDTAGIRRRKKVEYGNEFLMVNRALKAVRRADVVLLVVDVVEGINDQDKILAQRIAEDGRACVIVANKWDAV-EKDDRTFNEAVVYVKEELFAVSWADVLFTSALTGQRCHKIFDAIDKASAAHRQRVKTSILNEVLGEALVWQRPPTVKSSQQGRVYYCNQVATEPPSVVVFCNNPKLFPDSYKRYLDRKFRESLD-LTGTPIRWYFRGKKLRQLAKQ 672
            P++AV+GRPNVGKS +VNRL  T S    AIV D EG+TRDR YR AE+ G  F++VDTGGL+FD D D LFA +IREQA++A+EES   ILVVDGQ+G T++DE++A FLR  + K  P+ +AVNKCE+   G  +AS FW LGLGEPF VS LHG G AE++E+M   I +  + E   +E I VAI+GRPNVGKSSL+N ++G  RAIVSDVAGTTRD++DA++E            YRF+DTAGIRR+ K+E+G EF MVNRAL+A+RRADVVLLV+D   G+ +QD++LAQ+I++DGRACVI+ NKWDAV +KD  T++++V Y +EEL  + WA +LF SA TGQR  KI++A+D A  AHR+R+ TS+LNEVL +A +WQ PP  ++  Q ++YY +QV+T PP++VVF N+P L  D+YKRYLDRK RESLD    TPIRW FRG+++R + + 
Sbjct:    1 PLIAVVGRPNVGKSALVNRLAGTQSG--GAIVADEEGITRDRTYRNAEFLGEAFQLVDTGGLVFD-DNDALFAKEIREQAMIAIEESAGVILVVDGQMGPTSMDEQLAIFLRKEVLKKMPVILAVNKCESDKNGAYLASQFWNLGLGEPFAVSALHGVGTAEVMEKMFDDIAKPLDGEDDTDEEINVAIIGRPNVGKSSLINTIFGSNRAIVSDVAGTTRDSIDAIMERPSSDPEGLPTIYRFVDTAGIRRKGKIEFGPEFFMVNRALRAIRRADVVLLVLDATAGVTEQDRVLAQKISDDGRACVILCNKWDAVIDKDSSTYDQSVKYFREELPQIRWAPILFVSAATGQRVGKIYEAVDSAVNAHRRRISTSVLNEVLRDATLWQPPPARRNGAQAKIYYGSQVSTRPPTIVVFVNDPNLINDNYKRYLDRKMRESLDGFESTPIRWMFRGRRVRDVTRN 459          
BLAST of EWM28267.1 vs. NCBI_GenBank
Match: gi|495330001|ref|WP_008054740.1| (ribosome biogenesis GTPase Der [Arthrospira sp. PCC 8005] >gi|375325736|emb|CCE19007.1| GTP-binding protein EngA [Arthrospira sp. PCC 8005] >gi|585307821|emb|CDM97615.1| GTP-binding protein EngA [Arthrospira sp. PCC 8005])

HSP 1 Score: 533.872 bits (1374), Expect = 0.000e+0
Identity = 254/451 (56.32%), Postives = 335/451 (74.28%), Query Frame = 0
Query:  224 PVLAVIGRPNVGKSTIVNRLCRTMSTEPDAIVYDYEGVTRDRIYRKAEWNGRVFEVVDTGGLIFDEDQDNLFAPQIREQALLALEESVAAILVVDGQVGVTTLDEEVAKFLRLQKNKPIFVAVNKCETPNMGEAMASMFWKLGLGEPFPVSGLHGTGVAEMLERMLPHIYEVEEAEREEAIKVAIVGRPNVGKSSLLNRLYGKERAIVSDVAGTTRDAVDALVEVNGKSYRFIDTAGIRRRKKVEYGNEFLMVNRALKAVRRADVVLLVVDVVEGINDQDKILAQRIAEDGRACVIVANKWDAVEKDDRTFNEAVVYVKEELFAVSWADVLFTSALTGQRCHKIFDAIDKASAAHRQRVKTSILNEVLGEALVWQRPPTVKSSQQGRVYYCNQVATEPPSVVVFCNNPKLFPDSYKRYLDRKFRESLDLTGTPIRWYFRGKKLRQLAKQGS 674
            P++A+IGRPNVGKST+VNRL +T     DAIV+D  G+TRDR YR A W  R F VVDTGGL+FD+D +  F P IREQAL+AL E+ AAILVVDGQ G T  DE +A +LR QK  PI +AVNKCE+P  G   A+ FW+LGLG PFP+S +HG+G  E+L+ ++ ++    + E  E ++VAIVGRPNVGKSSLLN   G+ERAIVS ++GTTRDA+D +VE NG +YR +DTAGIRR+K VEYG EF  +NRA KA+RRADVVL V+D VEG+ DQD+ LA RI++DGRACVIV NKWDAVEKD  T  E    ++  L+ + WAD++F SA+TGQR  KIF  +DKA+  +R+RV TS++NEV+ EA+ W  PPT +  +QG++YY  QV + PP++V+F N+PK F D+Y+RY++ +FR+ L   GTPIR  +RGK +R++ +  +
Sbjct:    4 PIVAIIGRPNVGKSTLVNRLTQTQ----DAIVHDQPGMTRDRTYRSAYWQDREFTVVDTGGLVFDDDTE--FLPLIREQALMALAEATAAILVVDGQTGPTGGDEAIASWLRQQK-VPILLAVNKCESPTQGLTQAAQFWELGLGNPFPISSIHGSGTGELLDALIENLPASTDNEDSEELRVAIVGRPNVGKSSLLNTFLGQERAIVSPISGTTRDAIDTIVEHNGNTYRLVDTAGIRRKKHVEYGAEFFGINRAFKAIRRADVVLFVIDAVEGVTDQDQKLAGRISDDGRACVIVVNKWDAVEKDSYTILEYEKVMRSRLYFLDWADMIFVSAMTGQRVEKIFKLVDKAAEENRRRVSTSVINEVIEEAVRWHSPPTSRQGRQGKIYYGTQVTSSPPTIVLFVNDPKRFGDNYRRYMESQFRQQLGFAGTPIRLLWRGKAMREVERNSA 447          
BLAST of EWM28267.1 vs. NCBI_GenBank
Match: gi|493668635|ref|WP_006618977.1| (ribosome biogenesis GTPase Der [Arthrospira platensis] >gi|291569696|dbj|BAI91968.1| GTP-binding protein [Arthrospira platensis NIES-39] >gi|647981776|gb|KDR58659.1| GTPase Der [Arthrospira platensis str. Paraca] >gi|1015663220|gb|AMW29582.1| ribosome-associated GTPase EngA [Arthrospira platensis YZ])

HSP 1 Score: 533.487 bits (1373), Expect = 0.000e+0
Identity = 255/448 (56.92%), Postives = 333/448 (74.33%), Query Frame = 0
Query:  224 PVLAVIGRPNVGKSTIVNRLCRTMSTEPDAIVYDYEGVTRDRIYRKAEWNGRVFEVVDTGGLIFDEDQDNLFAPQIREQALLALEESVAAILVVDGQVGVTTLDEEVAKFLRLQKNKPIFVAVNKCETPNMGEAMASMFWKLGLGEPFPVSGLHGTGVAEMLERMLPHIYEVEEAEREEAIKVAIVGRPNVGKSSLLNRLYGKERAIVSDVAGTTRDAVDALVEVNGKSYRFIDTAGIRRRKKVEYGNEFLMVNRALKAVRRADVVLLVVDVVEGINDQDKILAQRIAEDGRACVIVANKWDAVEKDDRTFNEAVVYVKEELFAVSWADVLFTSALTGQRCHKIFDAIDKASAAHRQRVKTSILNEVLGEALVWQRPPTVKSSQQGRVYYCNQVATEPPSVVVFCNNPKLFPDSYKRYLDRKFRESLDLTGTPIRWYFRGKKLRQLAK 671
            P++A+IGRPNVGKST+VNRL +T     DAIV+D  G+TRDR YR A W  R F VVDTGGL+FD+D +  F P IREQAL+AL E+ AAILVVDGQ G T  DE +A +LR QK  PI +AVNKCE+P  G   A+ FW+LGLG PFP+S +HG G  E+L+ ++ H+    E +  E ++VAIVGRPNVGKSSLLN   G+ERAIVS ++GTTRDA+D +VE NG +YR +DTAGIRR+K VEYG EF  +NRA KA+RRADVVL V+D VEG+ DQD+ LA RIA+DGRACVIV NKWDAVEKD  T  E    ++  L+ + WAD++F SA+TGQR  KIF  +DKA+  +R+RV T+++NEV+ EA+ W  PPT +  +QG++YY  QV + PP++V+F N+PK F D+Y+RY++ +FR+ L   GTPIR  +RGK +R++ +
Sbjct:    4 PIVAIIGRPNVGKSTLVNRLTQTQ----DAIVHDQPGMTRDRTYRSAYWQDREFIVVDTGGLVFDDDTE--FVPLIREQALMALAEATAAILVVDGQTGPTGGDEAIASWLRQQK-VPILLAVNKCESPTQGLTQAAQFWELGLGTPFPISSIHGNGTGELLDTLIEHLPSSTEDDDNEELRVAIVGRPNVGKSSLLNTFLGQERAIVSPISGTTRDAIDTIVEHNGNTYRLVDTAGIRRKKHVEYGAEFFGINRAFKAIRRADVVLFVIDAVEGVTDQDQKLAGRIADDGRACVIVVNKWDAVEKDSYTILEYEKVMRSRLYFLDWADMIFVSAMTGQRVEKIFKLVDKAAEENRRRVSTAVINEVIEEAVRWHSPPTSRQGRQGKIYYGTQVTSGPPTIVLFVNDPKRFGDNYRRYMESQFRQQLGFAGTPIRLLWRGKAMREVER 444          
BLAST of EWM28267.1 vs. NCBI_GenBank
Match: gi|493673017|ref|WP_006623346.1| (ribosome biogenesis GTPase Der [Arthrospira platensis] >gi|406714175|gb|EKD09343.1| small GTP-binding protein [Arthrospira platensis C1])

HSP 1 Score: 532.717 bits (1371), Expect = 0.000e+0
Identity = 254/451 (56.32%), Postives = 334/451 (74.06%), Query Frame = 0
Query:  224 PVLAVIGRPNVGKSTIVNRLCRTMSTEPDAIVYDYEGVTRDRIYRKAEWNGRVFEVVDTGGLIFDEDQDNLFAPQIREQALLALEESVAAILVVDGQVGVTTLDEEVAKFLRLQKNKPIFVAVNKCETPNMGEAMASMFWKLGLGEPFPVSGLHGTGVAEMLERMLPHIYEVEEAEREEAIKVAIVGRPNVGKSSLLNRLYGKERAIVSDVAGTTRDAVDALVEVNGKSYRFIDTAGIRRRKKVEYGNEFLMVNRALKAVRRADVVLLVVDVVEGINDQDKILAQRIAEDGRACVIVANKWDAVEKDDRTFNEAVVYVKEELFAVSWADVLFTSALTGQRCHKIFDAIDKASAAHRQRVKTSILNEVLGEALVWQRPPTVKSSQQGRVYYCNQVATEPPSVVVFCNNPKLFPDSYKRYLDRKFRESLDLTGTPIRWYFRGKKLRQLAKQGS 674
            P++A+IGRPNVGKST+VNRL +T     DAIV+D  G+TRDR YR A W  R F VVDTGGL+FD+D +  F P IREQAL+AL E+ AAI VVDGQ G T  DE +A +LR QK  PI +AVNKCE+P  G   A+ FW+LGLG PFP+S +HG+G  E+L+ ++ ++    + E  E ++VAIVGRPNVGKSSLLN   G+ERAIVS ++GTTRDA+D +VE NG +YR +DTAGIRR+K VEYG EF  +NRA KA+RRADVVL V+D VEG+ DQD+ LA RI++DGRACVIV NKWDAVEKD  T  E    ++  L+ + WAD++F SA+TGQR  KIF  +DKA+  +R+RV TS++NEV+ EA+ W  PPT +  +QG++YY  QV + PP++V+F N+PK F D+Y+RY++ +FR+ L   GTPIR  +RGK +R++ +  S
Sbjct:    4 PIVAIIGRPNVGKSTLVNRLTQTQ----DAIVHDQPGMTRDRTYRSAYWQDREFTVVDTGGLVFDDDTE--FLPLIREQALIALGEATAAIFVVDGQTGPTGGDEAIASWLRQQK-VPILLAVNKCESPTQGLTQAAQFWELGLGNPFPISSIHGSGTGELLDALIENLPASTDNEDSEELRVAIVGRPNVGKSSLLNTFLGQERAIVSPISGTTRDAIDTIVEHNGNTYRLVDTAGIRRKKHVEYGAEFFGINRAFKAIRRADVVLFVIDAVEGVTDQDQKLAGRISDDGRACVIVVNKWDAVEKDSYTILEYEKVMRSRLYFLDWADMIFVSAMTGQRVEKIFKLVDKAAEENRRRVSTSVINEVIEEAVRWHSPPTSRQGRQGKIYYGTQVTSSPPTIVLFVNDPKRFGDNYRRYMESQFRQQLGFAGTPIRLLWRGKAMREVERNSS 447          
BLAST of EWM28267.1 vs. NCBI_GenBank
Match: gi|1072779531|ref|WP_069969394.1| (ribosome biogenesis GTPase Der [Desertifilum sp. IPPAS B-1220] >gi|1070568808|gb|OEJ72992.1| ribosome biogenesis GTPase Der [Desertifilum sp. IPPAS B-1220])

HSP 1 Score: 529.25 bits (1362), Expect = 3.657e-180
Identity = 255/447 (57.05%), Postives = 336/447 (75.17%), Query Frame = 0
Query:  223 LPVLAVIGRPNVGKSTIVNRLCRTMSTEPDAIVYDYEGVTRDRIYRKAEWNGRVFEVVDTGGLIFDEDQDNLFAPQIREQALLALEESVAAILVVDGQVGVTTLDEEVAKFLRLQKNKPIFVAVNKCETPNMGEAMASMFWKLGLGEPFPVSGLHGTGVAEMLERMLPHIYEVEEAEREEAIKVAIVGRPNVGKSSLLNRLYGKERAIVSDVAGTTRDAVDALVEVNGKSYRFIDTAGIRRRKKVEYGNEFLMVNRALKAVRRADVVLLVVDVVEGINDQDKILAQRIAEDGRACVIVANKWDAVEKDDRTFNEAVVYVKEELFAVSWADVLFTSALTGQRCHKIFDAIDKASAAHRQRVKTSILNEVLGEALVWQRPPTVKSSQQGRVYYCNQVATEPPSVVVFCNNPKLFPDSYKRYLDRKFRESLDLTGTPIRWYFRGKKLRQL 669
            LP++A+IGRPNVGKSTIVNRL    +   DAIVYD  G+TRDR YR A W  R F VVDTGGL+FD+D +  F P IREQA+ AL+ES  AI VVDGQ G T+ D+E+A +LR Q+  P+F+ VNKCE+P  G   A+ FW+LG+GEPFPVSG+HG+GV ++L+ ++ H+   ++ E      VAIVGRPNVGKSSLLN   G+ RAIVS ++GTTRDA+D +VE +GK+YR IDTAGIR++K VEYG EF  +NRA KA+RRADVVLLV+D ++G  +QD+ LA RIAE+GRACVIV NKWDAVEKD  T NE    +K  L+ + WA+ +F SALTGQR  KI D +D A+  H++RV TS++NEVL EA+ W  PPT +  +QG++YY  QV ++PP++ +F N+PK F ++Y+RY++R+FR +L  TGTPIR ++RGKK R++
Sbjct:    3 LPIVAIIGRPNVGKSTIVNRL----AGGKDAIVYDEPGITRDRTYRPAYWRDREFLVVDTGGLVFDDDTE--FLPLIREQAIAALKESKVAIFVVDGQAGPTSGDQEIASWLR-QQQVPVFLVVNKCESPEQGTIQAAQFWELGIGEPFPVSGIHGSGVGDLLDEVVQHLPPTDDTEEIRETNVAIVGRPNVGKSSLLNAFLGENRAIVSPISGTTRDAIDTVVERDGKTYRLIDTAGIRKKKGVEYGPEFFGINRAFKAIRRADVVLLVIDALDGATEQDQKLAGRIAEEGRACVIVVNKWDAVEKDSYTLNEYERQLKNRLYFLEWAETIFVSALTGQRVAKILDLVDTAAEQHQRRVTTSVINEVLEEAISWHSPPTNRQGRQGKIYYGTQVRSQPPTITLFVNDPKRFNENYRRYIERQFRTALGFTGTPIRLFWRGKKSREV 442          
The following BLAST results are available for this feature:
BLAST of EWM28267.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585110612|gb|EWM28267.1|0.000e+0100.00gtp-binding protein [Nannochloropsis gaditana][more]
gi|299473466|emb|CBN77863.1|0.000e+061.34PEngA, plastid EngA GTPase [Ectocarpus siliculosus... [more]
gi|219109543|ref|XP_002176526.1|0.000e+052.95predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|1072224104|gb|OEU08856.1|0.000e+055.53GTP-binding protein EngA [Fragilariopsis cylindrus... [more]
gi|493721258|ref|WP_006670724.1|0.000e+056.54MULTISPECIES: ribosome biogenesis GTPase Der [Arth... [more]
gi|223994975|ref|XP_002287171.1|0.000e+056.93predicted protein, partial [Thalassiosira pseudona... [more]
gi|495330001|ref|WP_008054740.1|0.000e+056.32ribosome biogenesis GTPase Der [Arthrospira sp. PC... [more]
gi|493668635|ref|WP_006618977.1|0.000e+056.92ribosome biogenesis GTPase Der [Arthrospira platen... [more]
gi|493673017|ref|WP_006623346.1|0.000e+056.32ribosome biogenesis GTPase Der [Arthrospira platen... [more]
gi|1072779531|ref|WP_069969394.1|3.657e-18057.05ribosome biogenesis GTPase Der [Desertifilum sp. I... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2389rna2389Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications