EWM28267.1, cds2381 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28267.1 vs. NCBI_GenBank
Match: gi|585110612|gb|EWM28267.1| (gtp-binding protein [Nannochloropsis gaditana]) HSP 1 Score: 1409.82 bits (3648), Expect = 0.000e+0 Identity = 683/683 (100.00%), Postives = 683/683 (100.00%), Query Frame = 0 Query: 1 MHFCQPSVPPSGSDNWRLRPRSRPGMAHRQPFHVRFFISVAACAAWTGRYSSVQGFAPPARPLHTKIEGMHCHVQPLSTAQSFSVHREQPHLDRTPKRKLTLLTMARGNSGGRSTGKGKQRGRKDTTAPGSPPSSDSSFPSSTRGDFEEEGSGDIDDDVDALMDDEGDDYVFNPADFPLLEGEIDFFGDLDGLEETEESRVLPGAQPLDTSGGITPKKKAVKLPVLAVIGRPNVGKSTIVNRLCRTMSTEPDAIVYDYEGVTRDRIYRKAEWNGRVFEVVDTGGLIFDEDQDNLFAPQIREQALLALEESVAAILVVDGQVGVTTLDEEVAKFLRLQKNKPIFVAVNKCETPNMGEAMASMFWKLGLGEPFPVSGLHGTGVAEMLERMLPHIYEVEEAEREEAIKVAIVGRPNVGKSSLLNRLYGKERAIVSDVAGTTRDAVDALVEVNGKSYRFIDTAGIRRRKKVEYGNEFLMVNRALKAVRRADVVLLVVDVVEGINDQDKILAQRIAEDGRACVIVANKWDAVEKDDRTFNEAVVYVKEELFAVSWADVLFTSALTGQRCHKIFDAIDKASAAHRQRVKTSILNEVLGEALVWQRPPTVKSSQQGRVYYCNQVATEPPSVVVFCNNPKLFPDSYKRYLDRKFRESLDLTGTPIRWYFRGKKLRQLAKQGSPVPYGMPGS 683 MHFCQPSVPPSGSDNWRLRPRSRPGMAHRQPFHVRFFISVAACAAWTGRYSSVQGFAPPARPLHTKIEGMHCHVQPLSTAQSFSVHREQPHLDRTPKRKLTLLTMARGNSGGRSTGKGKQRGRKDTTAPGSPPSSDSSFPSSTRGDFEEEGSGDIDDDVDALMDDEGDDYVFNPADFPLLEGEIDFFGDLDGLEETEESRVLPGAQPLDTSGGITPKKKAVKLPVLAVIGRPNVGKSTIVNRLCRTMSTEPDAIVYDYEGVTRDRIYRKAEWNGRVFEVVDTGGLIFDEDQDNLFAPQIREQALLALEESVAAILVVDGQVGVTTLDEEVAKFLRLQKNKPIFVAVNKCETPNMGEAMASMFWKLGLGEPFPVSGLHGTGVAEMLERMLPHIYEVEEAEREEAIKVAIVGRPNVGKSSLLNRLYGKERAIVSDVAGTTRDAVDALVEVNGKSYRFIDTAGIRRRKKVEYGNEFLMVNRALKAVRRADVVLLVVDVVEGINDQDKILAQRIAEDGRACVIVANKWDAVEKDDRTFNEAVVYVKEELFAVSWADVLFTSALTGQRCHKIFDAIDKASAAHRQRVKTSILNEVLGEALVWQRPPTVKSSQQGRVYYCNQVATEPPSVVVFCNNPKLFPDSYKRYLDRKFRESLDLTGTPIRWYFRGKKLRQLAKQGSPVPYGMPGS Sbjct: 1 MHFCQPSVPPSGSDNWRLRPRSRPGMAHRQPFHVRFFISVAACAAWTGRYSSVQGFAPPARPLHTKIEGMHCHVQPLSTAQSFSVHREQPHLDRTPKRKLTLLTMARGNSGGRSTGKGKQRGRKDTTAPGSPPSSDSSFPSSTRGDFEEEGSGDIDDDVDALMDDEGDDYVFNPADFPLLEGEIDFFGDLDGLEETEESRVLPGAQPLDTSGGITPKKKAVKLPVLAVIGRPNVGKSTIVNRLCRTMSTEPDAIVYDYEGVTRDRIYRKAEWNGRVFEVVDTGGLIFDEDQDNLFAPQIREQALLALEESVAAILVVDGQVGVTTLDEEVAKFLRLQKNKPIFVAVNKCETPNMGEAMASMFWKLGLGEPFPVSGLHGTGVAEMLERMLPHIYEVEEAEREEAIKVAIVGRPNVGKSSLLNRLYGKERAIVSDVAGTTRDAVDALVEVNGKSYRFIDTAGIRRRKKVEYGNEFLMVNRALKAVRRADVVLLVVDVVEGINDQDKILAQRIAEDGRACVIVANKWDAVEKDDRTFNEAVVYVKEELFAVSWADVLFTSALTGQRCHKIFDAIDKASAAHRQRVKTSILNEVLGEALVWQRPPTVKSSQQGRVYYCNQVATEPPSVVVFCNNPKLFPDSYKRYLDRKFRESLDLTGTPIRWYFRGKKLRQLAKQGSPVPYGMPGS 683
BLAST of EWM28267.1 vs. NCBI_GenBank
Match: gi|299473466|emb|CBN77863.1| (PEngA, plastid EngA GTPase [Ectocarpus siliculosus]) HSP 1 Score: 589.726 bits (1519), Expect = 0.000e+0 Identity = 284/463 (61.34%), Postives = 366/463 (79.05%), Query Frame = 0 Query: 222 KLPVLAVIGRPNVGKSTIVNRLCRTMSTEPDAIVYDYEGVTRDRIYRKAEWNGRVFEVVDTGGLIFDEDQDNLFAPQIREQALLALEESVAAILVVDGQVGVTTLDEEVAKFLRLQKNKPIFVAVNKCETPNMGEAMASMFWKLGLGEPFPVSGLHGTGVAEMLERMLPHIYEVEE-AEREEAIKVAIVGRPNVGKSSLLNRLYGKERAIVSDVAGTTRDAVDALVEVNGKSYRFIDTAGIRRRKKVEYGNEFLMVNRALKAVRRADVVLLVVDVVEGINDQDKILAQRIAEDGRACVIVANKWDAVE-KDDRTFNEAVVYVKEELFAVSWADVLFTSALTGQRCHKIFDAIDKASAAHRQRVKTSILNEVLGEALVWQRPPTVKSS--QQGRVYYCNQVATEPPSVVVFCNNPKLFPDSYKRYLDRKFRESLDLTGTPIRWYFRGKKLRQLAKQG--SPVPY 678 + PV+AVIGRPNVGKST+VNRL + + +IV+D GVTRDR Y++A + G+ F+VVDTGGL+FD+ ++FA +IR+QAL+ALEE+ A I+VVDG VG LD+E+A+FLR QK P+ +AVNKCE+ GE + FW LGLGEP+P+SGLHG G+ +M++ + H+YEV+E AE E+ I VAIVGRPNVGKSSLLNRL+G+ R+IVSDV GTTRD++DA+ E G++YR +DTAGIRR+ KV+YGNEF MVNRA KA+RRADVVLL+VDV GI DQD++LA RI DGRACV+V NKWD VE KDD ++N+AV Y ++ L V WA+V FTSA TGQRC K+FD +D+ + HR+RVKTS+LNEVL +A++WQ PP+ KSS QG++YYCNQ+AT PP+V VFCNNPKLF D+YKRYLDRKFRE L L TPIR+ +RGK+LR++ + +P PY Sbjct: 218 RFPVVAVIGRPNVGKSTVVNRLAKRF--KDGSIVFDESGVTRDRTYKRAWYCGKDFDVVDTGGLVFDDKGGDVFAKEIRQQALIALEEATAVIMVVDGIVGCNVLDQEIARFLRQQK-VPVVLAVNKCESQKYGEIQTAEFWCLGLGEPWPISGLHGDGIYDMMDNVAEHLYEVDENAEEEDNINVAIVGRPNVGKSSLLNRLFGETRSIVSDVPGTTRDSIDAMFERGGRTYRLVDTAGIRRKGKVDYGNEFFMVNRAFKAIRRADVVLLMVDVEAGITDQDRVLADRIQSDGRACVVVCNKWDLVEDKDDSSYNKAVEYARQMLSPVKWAEVCFTSAKTGQRCTKLFDLVDEVAVQHRRRVKTSVLNEVLRDAVLWQAPPSKKSSGASQGKIYYCNQIATRPPTVAVFCNNPKLFGDNYKRYLDRKFREQLGLKSTPIRFLWRGKRLRRMEQDNRRNPKPY 677
BLAST of EWM28267.1 vs. NCBI_GenBank
Match: gi|219109543|ref|XP_002176526.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217411061|gb|EEC50989.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 547.354 bits (1409), Expect = 0.000e+0 Identity = 278/525 (52.95%), Postives = 370/525 (70.48%), Query Frame = 0 Query: 166 EGDDYVFNPADFPLLEGEIDFFGDLDGLEE---TEESRVLPGAQPLDTSGGITPKKKAVKLPVLAVIGRPNVGKSTIVNRLCRTMSTEPDAIVYDYEGVTRDRIYRKAEWNGRVFEVVDTGGLIFDEDQDNLFAPQIREQALLALEESVAAILVVDGQVGVTTLDEEVAKFLRLQKNKPIFVAVNKCETPNMGEAMASMFWKLGLGEPFPVSGLHGTGVAEMLERMLPHIYE---VEEAEREEAIKVAIVGRPNVGKSSLLNRLYGKERAIVSDVAGTTRDAVDALVEVN--------GKSYRFIDTAGIRRRKKVEYGNEFLMVNRALKAVRRADVVLLVVDVVEGINDQDKILAQRIAEDGRACVIVANKWDA-VEKDDRTFNEAVVYVKEELFAVSWADVLFTSALTGQRCHKIFDAIDKASAAHRQRVKTSILNEVLGEALVWQRPPTVKSSQQGRVYYCNQVATEPPSVVVFCNNPKLFPDSYKRYLDRKFRESLD-LTGTPIRWYFRGKKLRQLAKQGS 674 + + + F P P+ I LD + E E S P QP I ++ K P++A++GRPNVGKS +VNR+ + S AIV D G+TRDR YR AE+ G F +VDTGGL+FD+D+ LFA +IREQA++A+EES A I+VVDGQ G+T +D +A+FLR + + P+ VAVNKCE+ G A+ FW LGLGEPFPVS LHG G AE++E + I E + +R E I +AI+GRPNVGKSSLLN ++G RAIVS++AGTTRD++DA++E YRF+DTAGIRR+ KV++G EF MVNRAL+A+RRADVVLL++D G+ +QD++LAQ+IA+DGRACVIV NKWDA V+KD T++++V Y +EEL + WA +LF SA TGQR KI+ AID A AHR+R+ T+ILNEVL +A++WQ PPT ++ Q ++YYCNQV+T PP+VVVFCN+PKL D+Y+RYLDRKFRESLD TPIRW FRG+++R + + S Sbjct: 17 QANSFTFRP--LPVTRPVIGLLATLDRVNEKSTVEPSSGDPQLQP------IRRLRQNKKEPLIAIVGRPNVGKSALVNRIAGSQSG--GAIVADESGITRDRTYRPAEFLGERFMIVDTGGLVFDDDESTLFAKEIREQAMVAIEESAAVIMVVDGQTGLTGMDLMIAEFLRKEVDIPVHVAVNKCESEKTGAMSAADFWGLGLGEPFPVSALHGVGTAEIMETIFDSIAEKKTFDAEDRPEEINIAIIGRPNVGKSSLLNSIFGDTRAIVSEMAGTTRDSIDAVMERPPPPGSDDLSTIYRFVDTAGIRRKGKVDFGPEFFMVNRALRAIRRADVVLLILDATSGVAEQDRVLAQKIADDGRACVIVCNKWDAVVDKDSTTYDKSVQYFREELPMIRWAPILFISAATGQRVGKIYSAIDGAIEAHRKRISTAILNEVLRDAILWQPPPTRRNGSQAKIYYCNQVSTRPPTVVVFCNDPKLVNDNYRRYLDRKFRESLDGFEATPIRWIFRGRRVRDVMRNRS 531
BLAST of EWM28267.1 vs. NCBI_GenBank
Match: gi|1072224104|gb|OEU08856.1| (GTP-binding protein EngA [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 546.584 bits (1407), Expect = 0.000e+0 Identity = 266/479 (55.53%), Postives = 353/479 (73.70%), Query Frame = 0 Query: 222 KLPVLAVIGRPNVGKSTIVNRLCRTMSTEPDAIVYDYEGVTRDRIYRKAEWNGRVFEVVDTGGLIFDEDQDNLFAPQIREQALLALEESVAAILVVDGQVGVTTLDEEVAKFLR---LQKNKPIFVAVNKCETPNMGEAMASMFWKLGLGEPFPVSGLHGTGVAEMLERMLPHIYE-----------------VEEAEREEAIKVAIVGRPNVGKSSLLNRLYGKERAIVSDVAGTTRDAVDALVEVNGKS-------YRFIDTAGIRRRKKVEYGNEFLMVNRALKAVRRADVVLLVVDVVEGINDQDKILAQRIAEDGRACVIVANKWDAV-EKDDRTFNEAVVYVKEELFAVSWADVLFTSALTGQRCHKIFDAIDKASAAHRQRVKTSILNEVLGEALVWQRPPTVKSSQQGRVYYCNQVATEPPSVVVFCNNPKLFPDSYKRYLDRKFRESLD-LTGTPIRWYFRGKKLRQLAK 671 K P++A++GRPNVGKS VNR+C T + AIV D EG+TRDR YR A + G F+VVDTGGL+F +D+ LFA +IREQA++A++ES +LVVDG++G+T +D+++A+FLR L +N P+ +AVNKCE+ +G A+ FW LGLGEP PVS LHG G AE+LER+ I + +E ER E I VAIVGRPNVGKSSLLN L+G +RAIVS +AGTTRD++DA++E G + YRF+DTAGIRRR KVEYG EF MVNRAL+A+RRADVVLLV+D G+ +QD+ILAQ+IA+DGRAC I+ NKWDAV +KD T++++V Y++ E+ + WA +LF SA TGQR KI++ +D A AHR+R+ TS+LNEVL +A++WQ PP ++ Q ++YYCNQV+T PP++VVFCN+PKL D+YKRYLDRKFRESLD TP+RW FRG++ R + + Sbjct: 18 KEPLVAILGRPNVGKSAFVNRICGTQNG--GAIVADEEGITRDRTYRDANFLGENFQVVDTGGLVFADDESTLFAREIREQAMVAIDESSGVVLVVDGKIGMTAMDQQIAEFLRKDVLSRNLPVILAVNKCESETVGALNAAEFWNLGLGEPIPVSALHGVGTAEVLERLFEEIKQKQSAALPGFGTKDALAAFDELERPEEINVAIVGRPNVGKSSLLNALFGDQRAIVSKMAGTTRDSIDAVMERPGDNEGDLPTIYRFVDTAGIRRRAKVEYGPEFFMVNRALRAIRRADVVLLVMDATAGVTEQDRILAQKIADDGRACAIICNKWDAVVDKDSSTYDKSVKYIRAEMPQIRWAPILFISAETGQRVGKIYNVVDDAIGAHRKRISTSVLNEVLRDAILWQPPPARRNGAQAKIYYCNQVSTRPPTIVVFCNDPKLVNDNYKRYLDRKFRESLDGFEATPVRWIFRGRRARDIMR 494
BLAST of EWM28267.1 vs. NCBI_GenBank
Match: gi|493721258|ref|WP_006670724.1| (MULTISPECIES: ribosome biogenesis GTPase Der [Arthrospira] >gi|209491626|gb|EDZ91995.1| small GTP-binding protein [Arthrospira maxima CS-328]) HSP 1 Score: 535.413 bits (1378), Expect = 0.000e+0 Identity = 255/451 (56.54%), Postives = 335/451 (74.28%), Query Frame = 0 Query: 224 PVLAVIGRPNVGKSTIVNRLCRTMSTEPDAIVYDYEGVTRDRIYRKAEWNGRVFEVVDTGGLIFDEDQDNLFAPQIREQALLALEESVAAILVVDGQVGVTTLDEEVAKFLRLQKNKPIFVAVNKCETPNMGEAMASMFWKLGLGEPFPVSGLHGTGVAEMLERMLPHIYEVEEAEREEAIKVAIVGRPNVGKSSLLNRLYGKERAIVSDVAGTTRDAVDALVEVNGKSYRFIDTAGIRRRKKVEYGNEFLMVNRALKAVRRADVVLLVVDVVEGINDQDKILAQRIAEDGRACVIVANKWDAVEKDDRTFNEAVVYVKEELFAVSWADVLFTSALTGQRCHKIFDAIDKASAAHRQRVKTSILNEVLGEALVWQRPPTVKSSQQGRVYYCNQVATEPPSVVVFCNNPKLFPDSYKRYLDRKFRESLDLTGTPIRWYFRGKKLRQLAKQGS 674 P++A+IGRPNVGKST+VNRL +T DAIV+D G+TRDR YR A W R F VVDTGGL+FD+D + F P IREQAL+AL E+ AAILVVDGQ G T DE +A +LR QK PI +AVNKCE+P G A+ FW+LGLG PFP+S +HG+G E+L+ ++ ++ + E E ++VAIVGRPNVGKSSLLN G+ERAIVS ++GTTRDA+D +VE NG +YR +DTAGIRR+K VEYG EF +NRA KA+RRADVVL V+D VEG+ DQD+ LA RI++DGRACVIV NKWDAVEKD T E ++ L+ + WAD++F SA+TGQR KIF +DKA+ +R+RV TS++NEV+ EA+ W PPT + +QG++YY QV + PP++V+F N+PK F D+Y+RY++ +FR+ L GTPIR +RGK +R++ + S Sbjct: 4 PIVAIIGRPNVGKSTLVNRLTQTQ----DAIVHDQPGMTRDRTYRSAYWQDREFTVVDTGGLVFDDDTE--FLPLIREQALMALAEATAAILVVDGQTGPTGGDEAIASWLRQQK-VPILLAVNKCESPTQGLTQAAQFWELGLGNPFPISSIHGSGTGELLDALIENLPASTDNEDSEELRVAIVGRPNVGKSSLLNTFLGQERAIVSPISGTTRDAIDTIVEHNGNTYRLVDTAGIRRKKHVEYGAEFFGINRAFKAIRRADVVLFVIDAVEGVTDQDQKLAGRISDDGRACVIVVNKWDAVEKDSYTILEYEKVMRSRLYFLDWADMIFVSAMTGQRVEKIFKLVDKAAEENRRRVSTSVINEVIEEAVRWHSPPTSRQGRQGKIYYGTQVTSSPPTIVLFVNDPKRFGDNYRRYMESQFRQQLGFAGTPIRLLWRGKAMREVERNSS 447
BLAST of EWM28267.1 vs. NCBI_GenBank
Match: gi|223994975|ref|XP_002287171.1| (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >gi|220976287|gb|EED94614.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 534.258 bits (1375), Expect = 0.000e+0 Identity = 263/462 (56.93%), Postives = 346/462 (74.89%), Query Frame = 0 Query: 224 PVLAVIGRPNVGKSTIVNRLCRTMSTEPDAIVYDYEGVTRDRIYRKAEWNGRVFEVVDTGGLIFDEDQDNLFAPQIREQALLALEESVAAILVVDGQVGVTTLDEEVAKFLR--LQKNKPIFVAVNKCETPNMGEAMASMFWKLGLGEPFPVSGLHGTGVAEMLERMLPHIYEVEEAE--REEAIKVAIVGRPNVGKSSLLNRLYGKERAIVSDVAGTTRDAVDALVEVNGKS-------YRFIDTAGIRRRKKVEYGNEFLMVNRALKAVRRADVVLLVVDVVEGINDQDKILAQRIAEDGRACVIVANKWDAV-EKDDRTFNEAVVYVKEELFAVSWADVLFTSALTGQRCHKIFDAIDKASAAHRQRVKTSILNEVLGEALVWQRPPTVKSSQQGRVYYCNQVATEPPSVVVFCNNPKLFPDSYKRYLDRKFRESLD-LTGTPIRWYFRGKKLRQLAKQ 672 P++AV+GRPNVGKS +VNRL T S AIV D EG+TRDR YR AE+ G F++VDTGGL+FD D D LFA +IREQA++A+EES ILVVDGQ+G T++DE++A FLR + K P+ +AVNKCE+ G +AS FW LGLGEPF VS LHG G AE++E+M I + + E +E I VAI+GRPNVGKSSL+N ++G RAIVSDVAGTTRD++DA++E YRF+DTAGIRR+ K+E+G EF MVNRAL+A+RRADVVLLV+D G+ +QD++LAQ+I++DGRACVI+ NKWDAV +KD T++++V Y +EEL + WA +LF SA TGQR KI++A+D A AHR+R+ TS+LNEVL +A +WQ PP ++ Q ++YY +QV+T PP++VVF N+P L D+YKRYLDRK RESLD TPIRW FRG+++R + + Sbjct: 1 PLIAVVGRPNVGKSALVNRLAGTQSG--GAIVADEEGITRDRTYRNAEFLGEAFQLVDTGGLVFD-DNDALFAKEIREQAMIAIEESAGVILVVDGQMGPTSMDEQLAIFLRKEVLKKMPVILAVNKCESDKNGAYLASQFWNLGLGEPFAVSALHGVGTAEVMEKMFDDIAKPLDGEDDTDEEINVAIIGRPNVGKSSLINTIFGSNRAIVSDVAGTTRDSIDAIMERPSSDPEGLPTIYRFVDTAGIRRKGKIEFGPEFFMVNRALRAIRRADVVLLVLDATAGVTEQDRVLAQKISDDGRACVILCNKWDAVIDKDSSTYDQSVKYFREELPQIRWAPILFVSAATGQRVGKIYEAVDSAVNAHRRRISTSVLNEVLRDATLWQPPPARRNGAQAKIYYGSQVSTRPPTIVVFVNDPNLINDNYKRYLDRKMRESLDGFESTPIRWMFRGRRVRDVTRN 459
BLAST of EWM28267.1 vs. NCBI_GenBank
Match: gi|495330001|ref|WP_008054740.1| (ribosome biogenesis GTPase Der [Arthrospira sp. PCC 8005] >gi|375325736|emb|CCE19007.1| GTP-binding protein EngA [Arthrospira sp. PCC 8005] >gi|585307821|emb|CDM97615.1| GTP-binding protein EngA [Arthrospira sp. PCC 8005]) HSP 1 Score: 533.872 bits (1374), Expect = 0.000e+0 Identity = 254/451 (56.32%), Postives = 335/451 (74.28%), Query Frame = 0 Query: 224 PVLAVIGRPNVGKSTIVNRLCRTMSTEPDAIVYDYEGVTRDRIYRKAEWNGRVFEVVDTGGLIFDEDQDNLFAPQIREQALLALEESVAAILVVDGQVGVTTLDEEVAKFLRLQKNKPIFVAVNKCETPNMGEAMASMFWKLGLGEPFPVSGLHGTGVAEMLERMLPHIYEVEEAEREEAIKVAIVGRPNVGKSSLLNRLYGKERAIVSDVAGTTRDAVDALVEVNGKSYRFIDTAGIRRRKKVEYGNEFLMVNRALKAVRRADVVLLVVDVVEGINDQDKILAQRIAEDGRACVIVANKWDAVEKDDRTFNEAVVYVKEELFAVSWADVLFTSALTGQRCHKIFDAIDKASAAHRQRVKTSILNEVLGEALVWQRPPTVKSSQQGRVYYCNQVATEPPSVVVFCNNPKLFPDSYKRYLDRKFRESLDLTGTPIRWYFRGKKLRQLAKQGS 674 P++A+IGRPNVGKST+VNRL +T DAIV+D G+TRDR YR A W R F VVDTGGL+FD+D + F P IREQAL+AL E+ AAILVVDGQ G T DE +A +LR QK PI +AVNKCE+P G A+ FW+LGLG PFP+S +HG+G E+L+ ++ ++ + E E ++VAIVGRPNVGKSSLLN G+ERAIVS ++GTTRDA+D +VE NG +YR +DTAGIRR+K VEYG EF +NRA KA+RRADVVL V+D VEG+ DQD+ LA RI++DGRACVIV NKWDAVEKD T E ++ L+ + WAD++F SA+TGQR KIF +DKA+ +R+RV TS++NEV+ EA+ W PPT + +QG++YY QV + PP++V+F N+PK F D+Y+RY++ +FR+ L GTPIR +RGK +R++ + + Sbjct: 4 PIVAIIGRPNVGKSTLVNRLTQTQ----DAIVHDQPGMTRDRTYRSAYWQDREFTVVDTGGLVFDDDTE--FLPLIREQALMALAEATAAILVVDGQTGPTGGDEAIASWLRQQK-VPILLAVNKCESPTQGLTQAAQFWELGLGNPFPISSIHGSGTGELLDALIENLPASTDNEDSEELRVAIVGRPNVGKSSLLNTFLGQERAIVSPISGTTRDAIDTIVEHNGNTYRLVDTAGIRRKKHVEYGAEFFGINRAFKAIRRADVVLFVIDAVEGVTDQDQKLAGRISDDGRACVIVVNKWDAVEKDSYTILEYEKVMRSRLYFLDWADMIFVSAMTGQRVEKIFKLVDKAAEENRRRVSTSVINEVIEEAVRWHSPPTSRQGRQGKIYYGTQVTSSPPTIVLFVNDPKRFGDNYRRYMESQFRQQLGFAGTPIRLLWRGKAMREVERNSA 447
BLAST of EWM28267.1 vs. NCBI_GenBank
Match: gi|493668635|ref|WP_006618977.1| (ribosome biogenesis GTPase Der [Arthrospira platensis] >gi|291569696|dbj|BAI91968.1| GTP-binding protein [Arthrospira platensis NIES-39] >gi|647981776|gb|KDR58659.1| GTPase Der [Arthrospira platensis str. Paraca] >gi|1015663220|gb|AMW29582.1| ribosome-associated GTPase EngA [Arthrospira platensis YZ]) HSP 1 Score: 533.487 bits (1373), Expect = 0.000e+0 Identity = 255/448 (56.92%), Postives = 333/448 (74.33%), Query Frame = 0 Query: 224 PVLAVIGRPNVGKSTIVNRLCRTMSTEPDAIVYDYEGVTRDRIYRKAEWNGRVFEVVDTGGLIFDEDQDNLFAPQIREQALLALEESVAAILVVDGQVGVTTLDEEVAKFLRLQKNKPIFVAVNKCETPNMGEAMASMFWKLGLGEPFPVSGLHGTGVAEMLERMLPHIYEVEEAEREEAIKVAIVGRPNVGKSSLLNRLYGKERAIVSDVAGTTRDAVDALVEVNGKSYRFIDTAGIRRRKKVEYGNEFLMVNRALKAVRRADVVLLVVDVVEGINDQDKILAQRIAEDGRACVIVANKWDAVEKDDRTFNEAVVYVKEELFAVSWADVLFTSALTGQRCHKIFDAIDKASAAHRQRVKTSILNEVLGEALVWQRPPTVKSSQQGRVYYCNQVATEPPSVVVFCNNPKLFPDSYKRYLDRKFRESLDLTGTPIRWYFRGKKLRQLAK 671 P++A+IGRPNVGKST+VNRL +T DAIV+D G+TRDR YR A W R F VVDTGGL+FD+D + F P IREQAL+AL E+ AAILVVDGQ G T DE +A +LR QK PI +AVNKCE+P G A+ FW+LGLG PFP+S +HG G E+L+ ++ H+ E + E ++VAIVGRPNVGKSSLLN G+ERAIVS ++GTTRDA+D +VE NG +YR +DTAGIRR+K VEYG EF +NRA KA+RRADVVL V+D VEG+ DQD+ LA RIA+DGRACVIV NKWDAVEKD T E ++ L+ + WAD++F SA+TGQR KIF +DKA+ +R+RV T+++NEV+ EA+ W PPT + +QG++YY QV + PP++V+F N+PK F D+Y+RY++ +FR+ L GTPIR +RGK +R++ + Sbjct: 4 PIVAIIGRPNVGKSTLVNRLTQTQ----DAIVHDQPGMTRDRTYRSAYWQDREFIVVDTGGLVFDDDTE--FVPLIREQALMALAEATAAILVVDGQTGPTGGDEAIASWLRQQK-VPILLAVNKCESPTQGLTQAAQFWELGLGTPFPISSIHGNGTGELLDTLIEHLPSSTEDDDNEELRVAIVGRPNVGKSSLLNTFLGQERAIVSPISGTTRDAIDTIVEHNGNTYRLVDTAGIRRKKHVEYGAEFFGINRAFKAIRRADVVLFVIDAVEGVTDQDQKLAGRIADDGRACVIVVNKWDAVEKDSYTILEYEKVMRSRLYFLDWADMIFVSAMTGQRVEKIFKLVDKAAEENRRRVSTAVINEVIEEAVRWHSPPTSRQGRQGKIYYGTQVTSGPPTIVLFVNDPKRFGDNYRRYMESQFRQQLGFAGTPIRLLWRGKAMREVER 444
BLAST of EWM28267.1 vs. NCBI_GenBank
Match: gi|493673017|ref|WP_006623346.1| (ribosome biogenesis GTPase Der [Arthrospira platensis] >gi|406714175|gb|EKD09343.1| small GTP-binding protein [Arthrospira platensis C1]) HSP 1 Score: 532.717 bits (1371), Expect = 0.000e+0 Identity = 254/451 (56.32%), Postives = 334/451 (74.06%), Query Frame = 0 Query: 224 PVLAVIGRPNVGKSTIVNRLCRTMSTEPDAIVYDYEGVTRDRIYRKAEWNGRVFEVVDTGGLIFDEDQDNLFAPQIREQALLALEESVAAILVVDGQVGVTTLDEEVAKFLRLQKNKPIFVAVNKCETPNMGEAMASMFWKLGLGEPFPVSGLHGTGVAEMLERMLPHIYEVEEAEREEAIKVAIVGRPNVGKSSLLNRLYGKERAIVSDVAGTTRDAVDALVEVNGKSYRFIDTAGIRRRKKVEYGNEFLMVNRALKAVRRADVVLLVVDVVEGINDQDKILAQRIAEDGRACVIVANKWDAVEKDDRTFNEAVVYVKEELFAVSWADVLFTSALTGQRCHKIFDAIDKASAAHRQRVKTSILNEVLGEALVWQRPPTVKSSQQGRVYYCNQVATEPPSVVVFCNNPKLFPDSYKRYLDRKFRESLDLTGTPIRWYFRGKKLRQLAKQGS 674 P++A+IGRPNVGKST+VNRL +T DAIV+D G+TRDR YR A W R F VVDTGGL+FD+D + F P IREQAL+AL E+ AAI VVDGQ G T DE +A +LR QK PI +AVNKCE+P G A+ FW+LGLG PFP+S +HG+G E+L+ ++ ++ + E E ++VAIVGRPNVGKSSLLN G+ERAIVS ++GTTRDA+D +VE NG +YR +DTAGIRR+K VEYG EF +NRA KA+RRADVVL V+D VEG+ DQD+ LA RI++DGRACVIV NKWDAVEKD T E ++ L+ + WAD++F SA+TGQR KIF +DKA+ +R+RV TS++NEV+ EA+ W PPT + +QG++YY QV + PP++V+F N+PK F D+Y+RY++ +FR+ L GTPIR +RGK +R++ + S Sbjct: 4 PIVAIIGRPNVGKSTLVNRLTQTQ----DAIVHDQPGMTRDRTYRSAYWQDREFTVVDTGGLVFDDDTE--FLPLIREQALIALGEATAAIFVVDGQTGPTGGDEAIASWLRQQK-VPILLAVNKCESPTQGLTQAAQFWELGLGNPFPISSIHGSGTGELLDALIENLPASTDNEDSEELRVAIVGRPNVGKSSLLNTFLGQERAIVSPISGTTRDAIDTIVEHNGNTYRLVDTAGIRRKKHVEYGAEFFGINRAFKAIRRADVVLFVIDAVEGVTDQDQKLAGRISDDGRACVIVVNKWDAVEKDSYTILEYEKVMRSRLYFLDWADMIFVSAMTGQRVEKIFKLVDKAAEENRRRVSTSVINEVIEEAVRWHSPPTSRQGRQGKIYYGTQVTSSPPTIVLFVNDPKRFGDNYRRYMESQFRQQLGFAGTPIRLLWRGKAMREVERNSS 447
BLAST of EWM28267.1 vs. NCBI_GenBank
Match: gi|1072779531|ref|WP_069969394.1| (ribosome biogenesis GTPase Der [Desertifilum sp. IPPAS B-1220] >gi|1070568808|gb|OEJ72992.1| ribosome biogenesis GTPase Der [Desertifilum sp. IPPAS B-1220]) HSP 1 Score: 529.25 bits (1362), Expect = 3.657e-180 Identity = 255/447 (57.05%), Postives = 336/447 (75.17%), Query Frame = 0 Query: 223 LPVLAVIGRPNVGKSTIVNRLCRTMSTEPDAIVYDYEGVTRDRIYRKAEWNGRVFEVVDTGGLIFDEDQDNLFAPQIREQALLALEESVAAILVVDGQVGVTTLDEEVAKFLRLQKNKPIFVAVNKCETPNMGEAMASMFWKLGLGEPFPVSGLHGTGVAEMLERMLPHIYEVEEAEREEAIKVAIVGRPNVGKSSLLNRLYGKERAIVSDVAGTTRDAVDALVEVNGKSYRFIDTAGIRRRKKVEYGNEFLMVNRALKAVRRADVVLLVVDVVEGINDQDKILAQRIAEDGRACVIVANKWDAVEKDDRTFNEAVVYVKEELFAVSWADVLFTSALTGQRCHKIFDAIDKASAAHRQRVKTSILNEVLGEALVWQRPPTVKSSQQGRVYYCNQVATEPPSVVVFCNNPKLFPDSYKRYLDRKFRESLDLTGTPIRWYFRGKKLRQL 669 LP++A+IGRPNVGKSTIVNRL + DAIVYD G+TRDR YR A W R F VVDTGGL+FD+D + F P IREQA+ AL+ES AI VVDGQ G T+ D+E+A +LR Q+ P+F+ VNKCE+P G A+ FW+LG+GEPFPVSG+HG+GV ++L+ ++ H+ ++ E VAIVGRPNVGKSSLLN G+ RAIVS ++GTTRDA+D +VE +GK+YR IDTAGIR++K VEYG EF +NRA KA+RRADVVLLV+D ++G +QD+ LA RIAE+GRACVIV NKWDAVEKD T NE +K L+ + WA+ +F SALTGQR KI D +D A+ H++RV TS++NEVL EA+ W PPT + +QG++YY QV ++PP++ +F N+PK F ++Y+RY++R+FR +L TGTPIR ++RGKK R++ Sbjct: 3 LPIVAIIGRPNVGKSTIVNRL----AGGKDAIVYDEPGITRDRTYRPAYWRDREFLVVDTGGLVFDDDTE--FLPLIREQAIAALKESKVAIFVVDGQAGPTSGDQEIASWLR-QQQVPVFLVVNKCESPEQGTIQAAQFWELGIGEPFPVSGIHGSGVGDLLDEVVQHLPPTDDTEEIRETNVAIVGRPNVGKSSLLNAFLGENRAIVSPISGTTRDAIDTVVERDGKTYRLIDTAGIRKKKGVEYGPEFFGINRAFKAIRRADVVLLVIDALDGATEQDQKLAGRIAEEGRACVIVVNKWDAVEKDSYTLNEYERQLKNRLYFLEWAETIFVSALTGQRVAKILDLVDTAAEQHQRRVTTSVINEVLEEAISWHSPPTNRQGRQGKIYYGTQVRSQPPTITLFVNDPKRFNENYRRYIERQFRTALGFTGTPIRLFWRGKKSREV 442 The following BLAST results are available for this feature:
BLAST of EWM28267.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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