EWM28283.1, cds2372 (CDS) Nannochloropsis gaditana

Overview
NameEWM28283.1
Unique Namecds2372
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:246188..248293 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM28283.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100004g10.9214.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:246188..248293 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM28283.1 vs. NCBI_GenBank
Match: gi|585110628|gb|EWM28283.1| (hypothetical protein Naga_100004g10 [Nannochloropsis gaditana])

HSP 1 Score: 1411.74 bits (3653), Expect = 0.000e+0
Identity = 701/701 (100.00%), Postives = 701/701 (100.00%), Query Frame = 0 
Query:    1 MHRPSGPPVASFPAHPSSPSPAGTSEREITGDKNDDHSRRRPYTDRRPRRTFQPDGSLPEMSDPHLFSAKRFRPLDHGYDASHRPMSRVEARCAQCAHRLVYQGEDSKGHGLAERGRGQLRNGMDGKEGDGRDGDSYRPGEQHRSMLQDSSEDFVEHVRNGILSLSPDREEEEDSVEEKEEEEWDGTEEEGRCPRRGFEDKERKKGTREPVWRGKGEAGGCEREAKRIVDSEVEACGPCPPPRRYPVSEESAGRESASGSVFSSYYHGKGENHALRETSPRGPAGAKRMMRIYAPPPSSPSCPPLHRRPRPRCLSSPSPSPPFPSLLSLTRSQVPTRPKPRGRGRWWLLRWRPLPSWFGRHSRPWVLRQDSPWKRAWDMLTVLVALLVLCYDAASLVHLHPGPFPPGPIPSSPPSAPPSSASFQASPSPAPSPLDATSLYHLLLLETFWFLADLALAFRTEVEAGVDSEAETETLVLLTDPHAIAVQYLTRDFWLDLCFSFPWLAISALLLAPKQKKRNLLRRAIGHVGRGVGGLLGRVKRGVGEKIPRMLRPGNVKRFLEWTKVLDVKKVDGVKHVVKYRSGYRGLRLFIRALRWLCRFPVVSFLWRVYRKLEAHLVVALPDGEGGEEERKTPGKVWRARHTRSRGTHASTRQEDYEVKFREKANRKFHTGEVDREAIGGHEHVKEKWPETTWFEKRLDE 701
            MHRPSGPPVASFPAHPSSPSPAGTSEREITGDKNDDHSRRRPYTDRRPRRTFQPDGSLPEMSDPHLFSAKRFRPLDHGYDASHRPMSRVEARCAQCAHRLVYQGEDSKGHGLAERGRGQLRNGMDGKEGDGRDGDSYRPGEQHRSMLQDSSEDFVEHVRNGILSLSPDREEEEDSVEEKEEEEWDGTEEEGRCPRRGFEDKERKKGTREPVWRGKGEAGGCEREAKRIVDSEVEACGPCPPPRRYPVSEESAGRESASGSVFSSYYHGKGENHALRETSPRGPAGAKRMMRIYAPPPSSPSCPPLHRRPRPRCLSSPSPSPPFPSLLSLTRSQVPTRPKPRGRGRWWLLRWRPLPSWFGRHSRPWVLRQDSPWKRAWDMLTVLVALLVLCYDAASLVHLHPGPFPPGPIPSSPPSAPPSSASFQASPSPAPSPLDATSLYHLLLLETFWFLADLALAFRTEVEAGVDSEAETETLVLLTDPHAIAVQYLTRDFWLDLCFSFPWLAISALLLAPKQKKRNLLRRAIGHVGRGVGGLLGRVKRGVGEKIPRMLRPGNVKRFLEWTKVLDVKKVDGVKHVVKYRSGYRGLRLFIRALRWLCRFPVVSFLWRVYRKLEAHLVVALPDGEGGEEERKTPGKVWRARHTRSRGTHASTRQEDYEVKFREKANRKFHTGEVDREAIGGHEHVKEKWPETTWFEKRLDE
Sbjct:    1 MHRPSGPPVASFPAHPSSPSPAGTSEREITGDKNDDHSRRRPYTDRRPRRTFQPDGSLPEMSDPHLFSAKRFRPLDHGYDASHRPMSRVEARCAQCAHRLVYQGEDSKGHGLAERGRGQLRNGMDGKEGDGRDGDSYRPGEQHRSMLQDSSEDFVEHVRNGILSLSPDREEEEDSVEEKEEEEWDGTEEEGRCPRRGFEDKERKKGTREPVWRGKGEAGGCEREAKRIVDSEVEACGPCPPPRRYPVSEESAGRESASGSVFSSYYHGKGENHALRETSPRGPAGAKRMMRIYAPPPSSPSCPPLHRRPRPRCLSSPSPSPPFPSLLSLTRSQVPTRPKPRGRGRWWLLRWRPLPSWFGRHSRPWVLRQDSPWKRAWDMLTVLVALLVLCYDAASLVHLHPGPFPPGPIPSSPPSAPPSSASFQASPSPAPSPLDATSLYHLLLLETFWFLADLALAFRTEVEAGVDSEAETETLVLLTDPHAIAVQYLTRDFWLDLCFSFPWLAISALLLAPKQKKRNLLRRAIGHVGRGVGGLLGRVKRGVGEKIPRMLRPGNVKRFLEWTKVLDVKKVDGVKHVVKYRSGYRGLRLFIRALRWLCRFPVVSFLWRVYRKLEAHLVVALPDGEGGEEERKTPGKVWRARHTRSRGTHASTRQEDYEVKFREKANRKFHTGEVDREAIGGHEHVKEKWPETTWFEKRLDE 701
The following BLAST results are available for this feature:
BLAST of EWM28283.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585110628|gb|EWM28283.1|0.000e+0100.00hypothetical protein Naga_100004g10 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2380rna2380Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications