EWM28159.1, cds2363 (CDS) Nannochloropsis gaditana

Overview
NameEWM28159.1
Unique Namecds2363
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:220721..221224 -
Alignment locationCM002459.1:219821..220550 -
Alignment locationCM002459.1:219584..219612 -

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Properties
Property NameValue
Protein idEWM28159.1
Productusp37 protein
Orig transcript idgnl|cribi|Naga_100004g1.9090.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:220721..221224 -
CM002459.1supercontigCM002459.1:219821..220550 -
CM002459.1supercontigCM002459.1:219584..219612 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0036459thiol-dependent ubiquitinyl hydrolase activity
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
GO:0009056catabolic process
GO:0006511ubiquitin-dependent protein catabolic process
Vocabulary: INTERPRO
TermDefinition
IPR028889USP_dom
IPR001394Peptidase_C19_UCH
Homology
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BLAST of EWM28159.1 vs. NCBI_GenBank
Match: gi|585110504|gb|EWM28159.1| (usp37 protein [Nannochloropsis gaditana])

HSP 1 Score: 832.402 bits (2149), Expect = 0.000e+0
Identity = 420/420 (100.00%), Postives = 420/420 (100.00%), Query Frame = 0 
Query:    1 MAHDNEPALPNAALAPEDSHTTDSGTYGNGSCGKIDIKRNGVHGREDKTMCPQDHTGWTTLGLVNLGNTCFLNTVLQALASLPPFKEALEQALTFRPGSDAPVSRLVLRYLHSLQPTCIKNDAAATFGAPFPPHSEAQSPSDLLYLLRGCCASFFRRNEQQDAEEFLQVPSSFSSSSPSSSSHSSSSSSSSSSSSSSSSSSSSFAAAAASSSSSFAPSFSSSSIAASSTFTFRNPFAGWLASVVKCAVCGHCRPIQNSSFLDVPLSLHPPATSPSSPSSPSPPFLSPVVSSLRPLNGLLTGRSLPAPPFRLPSASHPPPSSSSSSSSSSSSSHILELLDSFAQEETVRGLPCHSCRCRHVLRDLTAKIQRLETGIRHVEEAGGEQVEGTLTFLRKEMKEVRAVKENLLRLDGSRPTAGAH 420
            MAHDNEPALPNAALAPEDSHTTDSGTYGNGSCGKIDIKRNGVHGREDKTMCPQDHTGWTTLGLVNLGNTCFLNTVLQALASLPPFKEALEQALTFRPGSDAPVSRLVLRYLHSLQPTCIKNDAAATFGAPFPPHSEAQSPSDLLYLLRGCCASFFRRNEQQDAEEFLQVPSSFSSSSPSSSSHSSSSSSSSSSSSSSSSSSSSFAAAAASSSSSFAPSFSSSSIAASSTFTFRNPFAGWLASVVKCAVCGHCRPIQNSSFLDVPLSLHPPATSPSSPSSPSPPFLSPVVSSLRPLNGLLTGRSLPAPPFRLPSASHPPPSSSSSSSSSSSSSHILELLDSFAQEETVRGLPCHSCRCRHVLRDLTAKIQRLETGIRHVEEAGGEQVEGTLTFLRKEMKEVRAVKENLLRLDGSRPTAGAH
Sbjct:    1 MAHDNEPALPNAALAPEDSHTTDSGTYGNGSCGKIDIKRNGVHGREDKTMCPQDHTGWTTLGLVNLGNTCFLNTVLQALASLPPFKEALEQALTFRPGSDAPVSRLVLRYLHSLQPTCIKNDAAATFGAPFPPHSEAQSPSDLLYLLRGCCASFFRRNEQQDAEEFLQVPSSFSSSSPSSSSHSSSSSSSSSSSSSSSSSSSSFAAAAASSSSSFAPSFSSSSIAASSTFTFRNPFAGWLASVVKCAVCGHCRPIQNSSFLDVPLSLHPPATSPSSPSSPSPPFLSPVVSSLRPLNGLLTGRSLPAPPFRLPSASHPPPSSSSSSSSSSSSSHILELLDSFAQEETVRGLPCHSCRCRHVLRDLTAKIQRLETGIRHVEEAGGEQVEGTLTFLRKEMKEVRAVKENLLRLDGSRPTAGAH 420
The following BLAST results are available for this feature:
BLAST of EWM28159.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585110504|gb|EWM28159.1|0.000e+0100.00usp37 protein [Nannochloropsis gaditana][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2371rna2371Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications