EWM30449.1, cds235 (CDS) Nannochloropsis gaditana

Overview
NameEWM30449.1
Unique Namecds235
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:592272..595163 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM30449.1
Productnuclear cap-binding protein subunit 1
Orig transcript idgnl|cribi|Naga_100100g3.8917.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:592272..595163 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
GO:0005846nuclear cap binding complex
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
GO:0006139nucleobase-containing compound metabolic process
GO:0051028mRNA transport
GO:0045292mRNA cis splicing, via spliceosome
GO:0016070RNA metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0000339RNA cap binding
GO:0005515protein binding
GO:0003723RNA binding
Vocabulary: INTERPRO
TermDefinition
IPR016024ARM-type_fold
IPR027159CBP80
IPR015172MIF4G-like_typ-1
IPR015174MIF4G-like_typ-2
IPR016021MIF4-like_typ_1/2/3
IPR003890MIF4G-like_typ-3
Homology
BLAST of EWM30449.1 vs. NCBI_GenBank
Match: gi|585113112|gb|EWM30449.1| (nuclear cap-binding protein subunit 1 [Nannochloropsis gaditana])

HSP 1 Score: 1951.79 bits (5055), Expect = 0.000e+0
Identity = 963/963 (100.00%), Postives = 963/963 (100.00%), Query Frame = 0
Query:    1 MQQLMAFCATIQVGHSSHHVSLFVHAYVYQTLSQAREMSYHAAGNYGPPPGSGGGGRGYGGPDRKRYRGDESHGGGYHGNHGGGGGRYRGDRARYNQDRRGGDRGPPAKKPKTKEDEIMTQIKALLVRVGDFHHITTSLSSLEENVEGLAGALGDELATFGDLIADFVLTAACQLSLQTPVYATLVGLLNARDEDFGAKVVQGGAVRLDAMIRQGRWINAKLVLRFLCELVNARVVKAEGEGSLGEVLTTLAGPLKEPDAAVPPARKDLYLYLVVSVLPWVWDALAQEWPDGLPALLETTFAYADRRVPLYLKKGVRCVLDASLEDEEDGVEEAGASGHPVEPATDSIQRALRVVKTLAATLEEGQASLEINAIVKPWKGVKEELSQGIRHAIPPLTLPDPDPMVLATGGFPLPLHPCFAEFDLFDAESGGQAASVATLPPIERWVLRECLKDSLVTFRPYVNEAGNKRGSFAAEVEQLYSISYLAPPEVATEFLVAEVLLLWLVQRPSRDLAYLHRLLLQVVQTPKAAGSMALGLHILFQDYLEVLDHGAVTQLANWFGAHLTNTQFTFPYWDAWAGLVAEQEAEDHPQRYFLRRALDVAARQSYVGKVKEHIPASLHPYVPEDPYSLSPYLPRAAAVEEDNAADAASTQILKVLVRHFQAVLQGQMPAAEVQAWLDSSVAPPADIATSDPLWRVTLVAHALSRISDDTVAHLPALLEKCLGWFRQLFEADEHQLRMVEALAEVWAGSPQMLLLALNAVMRMHMVLPVNLVAWLVRPETARRYAQDALYHDLFVDAVDRSLESVANYGELISRALGPHPPATGQSEEARARQCAGEETVEHGIVAVENAQDLLLELVEGLSKVLGEGLASSAEQASEWVRAGLAYLRGTLQIYLQLEEKGLNRVIPGTEPVFDLSKVEESIGPLESLHPALHGVMLDVRRYIDDRQVFGGVHAHGQVFSDEE 963
            MQQLMAFCATIQVGHSSHHVSLFVHAYVYQTLSQAREMSYHAAGNYGPPPGSGGGGRGYGGPDRKRYRGDESHGGGYHGNHGGGGGRYRGDRARYNQDRRGGDRGPPAKKPKTKEDEIMTQIKALLVRVGDFHHITTSLSSLEENVEGLAGALGDELATFGDLIADFVLTAACQLSLQTPVYATLVGLLNARDEDFGAKVVQGGAVRLDAMIRQGRWINAKLVLRFLCELVNARVVKAEGEGSLGEVLTTLAGPLKEPDAAVPPARKDLYLYLVVSVLPWVWDALAQEWPDGLPALLETTFAYADRRVPLYLKKGVRCVLDASLEDEEDGVEEAGASGHPVEPATDSIQRALRVVKTLAATLEEGQASLEINAIVKPWKGVKEELSQGIRHAIPPLTLPDPDPMVLATGGFPLPLHPCFAEFDLFDAESGGQAASVATLPPIERWVLRECLKDSLVTFRPYVNEAGNKRGSFAAEVEQLYSISYLAPPEVATEFLVAEVLLLWLVQRPSRDLAYLHRLLLQVVQTPKAAGSMALGLHILFQDYLEVLDHGAVTQLANWFGAHLTNTQFTFPYWDAWAGLVAEQEAEDHPQRYFLRRALDVAARQSYVGKVKEHIPASLHPYVPEDPYSLSPYLPRAAAVEEDNAADAASTQILKVLVRHFQAVLQGQMPAAEVQAWLDSSVAPPADIATSDPLWRVTLVAHALSRISDDTVAHLPALLEKCLGWFRQLFEADEHQLRMVEALAEVWAGSPQMLLLALNAVMRMHMVLPVNLVAWLVRPETARRYAQDALYHDLFVDAVDRSLESVANYGELISRALGPHPPATGQSEEARARQCAGEETVEHGIVAVENAQDLLLELVEGLSKVLGEGLASSAEQASEWVRAGLAYLRGTLQIYLQLEEKGLNRVIPGTEPVFDLSKVEESIGPLESLHPALHGVMLDVRRYIDDRQVFGGVHAHGQVFSDEE
Sbjct:    1 MQQLMAFCATIQVGHSSHHVSLFVHAYVYQTLSQAREMSYHAAGNYGPPPGSGGGGRGYGGPDRKRYRGDESHGGGYHGNHGGGGGRYRGDRARYNQDRRGGDRGPPAKKPKTKEDEIMTQIKALLVRVGDFHHITTSLSSLEENVEGLAGALGDELATFGDLIADFVLTAACQLSLQTPVYATLVGLLNARDEDFGAKVVQGGAVRLDAMIRQGRWINAKLVLRFLCELVNARVVKAEGEGSLGEVLTTLAGPLKEPDAAVPPARKDLYLYLVVSVLPWVWDALAQEWPDGLPALLETTFAYADRRVPLYLKKGVRCVLDASLEDEEDGVEEAGASGHPVEPATDSIQRALRVVKTLAATLEEGQASLEINAIVKPWKGVKEELSQGIRHAIPPLTLPDPDPMVLATGGFPLPLHPCFAEFDLFDAESGGQAASVATLPPIERWVLRECLKDSLVTFRPYVNEAGNKRGSFAAEVEQLYSISYLAPPEVATEFLVAEVLLLWLVQRPSRDLAYLHRLLLQVVQTPKAAGSMALGLHILFQDYLEVLDHGAVTQLANWFGAHLTNTQFTFPYWDAWAGLVAEQEAEDHPQRYFLRRALDVAARQSYVGKVKEHIPASLHPYVPEDPYSLSPYLPRAAAVEEDNAADAASTQILKVLVRHFQAVLQGQMPAAEVQAWLDSSVAPPADIATSDPLWRVTLVAHALSRISDDTVAHLPALLEKCLGWFRQLFEADEHQLRMVEALAEVWAGSPQMLLLALNAVMRMHMVLPVNLVAWLVRPETARRYAQDALYHDLFVDAVDRSLESVANYGELISRALGPHPPATGQSEEARARQCAGEETVEHGIVAVENAQDLLLELVEGLSKVLGEGLASSAEQASEWVRAGLAYLRGTLQIYLQLEEKGLNRVIPGTEPVFDLSKVEESIGPLESLHPALHGVMLDVRRYIDDRQVFGGVHAHGQVFSDEE 963          
BLAST of EWM30449.1 vs. NCBI_GenBank
Match: gi|148228517|ref|NP_001085472.1| (nuclear cap-binding protein subunit 1-B [Xenopus laevis] >gi|82184623|sp|Q6GQD0.1|NBP1B_XENLA RecName: Full=Nuclear cap-binding protein subunit 1-B >gi|49117885|gb|AAH72815.1| MGC80159 protein [Xenopus laevis])

HSP 1 Score: 197.978 bits (502), Expect = 4.656e-49
Identity = 205/829 (24.73%), Postives = 359/829 (43.31%), Query Frame = 0
Query:   92 RARYNQDRRGGDRGPPAKKPKTKED-EIMTQIKALLVRVGDFHHITTSLSSLEENVEGLAGALGDELATFGDLIADFVLTAACQLSLQTPVYATLVGLLNARDEDFGAKVVQGGAVRLDAMIRQGRWINAKLVLRFLCELVNARVVKAEGEGSLGEVLTTLAGPLKEPDAAVPPARKDLYLYLVVSVLPWVWDALAQEWPDGLPALLETTFAYADRRVPLYLKKGVRCVLDASLEDEEDGVEEAGASGHPVEPATDSIQRALRVVKTLAATLEEGQASLEINAIVKPWKGVKEELSQGIRHAIPPLTLPDPDPMVLATGGFPLPLHPCFAEFDLFDAESGGQAASVATLPPIERWVLRECLKDSLVTFRPYVNEAGNKRGSFAAEVEQLYSISYLAPPEVATEFLVAEVLLLWLVQRPS---RDLAYLHRLLLQVVQTPKAAGSMALGLHILFQDYLEVLDHGAVTQLANWFGAHLTNTQFTFPYWDAWAGLVAEQEAEDHPQRYFLRRALDVAARQSYVGKVKEHIPASLHPYVPEDPYSLSPY-------LP-RAAAVEEDNAAD--AASTQILKVLVRHFQAVLQGQMPAAEVQAWLDSSVAPPADIATSDPLWRVTLVAHALSRISDDTVAHLPALLEKCLGWFRQLFEADEHQLRMVEALAEVWAGSPQMLLLALNAVMRMHMVLPVNLVAWLVRPETARRYAQDALYHDLF--VDAVDRSLESVANYGELISRALG---PHPPATGQSEEARARQCAGEETVEHGIVAVENAQ----DLLLELVEGLSKVLGEGLASSAEQASEWVRAGLAYLRGTL-QIYLQ 896
            R R++ +  GG    P K+ +T E  EI  ++++L+ RVG+      S SSLE N+EGLAG L  +L  + + I   +   A  L  +  VY TLVGLLNAR+ +FG + V+     L   I+   +  A  ++RFLC+LVN  V+ A    S+  +  +  G  +E D  +P  R D Y+Y V+S LPWV   L ++    +  +L    AY  +R  L+L      +L             +    HP E   D +   ++ +K         +   +   I +P+      L + ++H +PP T   P P       +P+P    F  FD  DA  G       +   +ER+V+ E L   L +          +R + AA++     +SY    ++   + + EV+   L Q PS    D+ Y   L+      P +   +      +    L+ ++   + +  NWF  HL+N QF +  W+ WA  +++    D P+  F+R  L+   R SY  ++ + +PA+     P +P ++  Y       LP  + AV   NA    A+  +I  +L           +P      + D  +         +PL ++ +    L  ++  + +H  + L K    F+ L E+DE +L ++  + +VW   PQM+ + L+ ++R  +V    +  W+  PE +  + +  ++  L   +  +++ ++ +    E   + L     H  +    E++  +    EE +E     VE+AQ    +L L + +    +L E L        +   A     R  L QI+LQ
Sbjct:    3 RRRHSDENDGGQ---PHKRRRTSEPLEIEDRLESLICRVGE-----KSTSSLESNLEGLAGVLEADLPNYKNKILRILCFVARLLPEKMTVYTTLVGLLNARNYNFGGEFVEAMIRHLKETIKLNAYNEAIYLVRFLCDLVNCHVIAA---PSMVAMFESFVGVTQEED--IPQVRSDWYVYAVLSSLPWVGKELYEKKDVEMDQILSQIEAYLKQRQKLHLS-----ILQVW----------SAEKPHPQEEYLDCLWAQVQKLK---------KDRWQERHIQRPYLAFDSVLCEALQHNLPPFT---PPPHT-EDSVYPVP-RVIFRMFDYTDAPEGPVMPGSHS---VERFVIEENLHCILKS-------HWRERKTCAAQL-----LSYPEKNKIPLNYHIVEVIFGELFQLPSPPQIDVMYTTLLIELCKLQPGSLPQVLAQASEMLYTRLDTMNTTCIDRFINWFSHHLSNFQFRWN-WEDWADCLSQDL--DKPKPQFVREVLEKCMRLSYHQRILDIVPATFSALYPANPSNVIKYGDESNSALPGYSVAVILTNAIKNKASDKEIFNIL---------KDIPNPNQDDYDDEGIG-------FNPL-KIEVFVQTLLNLASKSFSHSFSALAKFHDIFKALSESDEGKLHILRVVYDVWKNHPQMIAVLLDKMIRTQIVDCAAVANWIFSPELSPDFTRFYIWEILHSTIRKMNKHVQKIQKELEDTKQRLAKQHKHRDSDDNDEDSGRKDGPLEEQIERLQEKVESAQSEQKNLFLVIFQRFIMILTEHLVRCETGGIDVNTAWYKNCRERLQQIFLQ 754          
BLAST of EWM30449.1 vs. NCBI_GenBank
Match: gi|1050395548|gb|OCT97738.1| (hypothetical protein XELAEV_18009967mg [Xenopus laevis])

HSP 1 Score: 195.667 bits (496), Expect = 2.684e-48
Identity = 201/824 (24.39%), Postives = 356/824 (43.20%), Query Frame = 0
Query:   92 RARYNQDRRGGDRGPPAKKPKTKED-EIMTQIKALLVRVGDFHHITTSLSSLEENVEGLAGALGDELATFGDLIADFVLTAACQLSLQTPVYATLVGLLNARDEDFGAKVVQGGAVRLDAMIRQGRWINAKLVLRFLCELVNARVVKAEGEGSLGEVLTTLAGPLKEPDAAVPPARKDLYLYLVVSVLPWVWDALAQEWPDGLPALLETTFAYADRRVPLYLKKGVRCVLDASLEDEEDGVEEAGASGHPVEPATDSIQRALRVVKTLAATLEEGQASLEINAIVKPWKGVKEELSQGIRHAIPPLTLPDPDPMVLATGGFPLPLHPCFAEFDLFDAESGGQAASVATLPPIERWVLRECLKDSLVTFRPYVNEAGNKRGSFAAEVEQLYSISYLAPPEVATEFLVAEVLLLWLVQRPS---RDLAYLHRLLLQVVQTPKAAGSMALGLHILFQDYLEVLDHGAVTQLANWFGAHLTNTQFTFPYWDAWAGLVAEQEAEDHPQRYFLRRALDVAARQSYVGKVKEHIPASLHPYVPEDPYSLSPYLPRAAAVEEDNAADAASTQILKVLVRHFQAVLQGQMPAAEVQAWLDSSVAPPADIATS-----DPLWRVTLVAHALSRISDDTVAHLPALLEKCLGWFRQLFEADEHQLRMVEALAEVWAGSPQMLLLALNAVMRMHMVLPVNLVAWLVRPETARRYAQDALYHDLF--VDAVDRSLESVANYGELISRALG---PHPPATGQSEEARARQCAGEETVEHGIVAVENAQ----DLLLELVEGLSKVLGEGLASSAEQASEWVRAGLAYLRGTL-QIYLQ 896
            R R++ +  GG    P K+ +T E  EI  ++++L+ RVG+      S SSLE N+EGLAG L  +L  + + I   +   A  L  +  VY TLVGLLNAR+ +FG + V+     L   I+   +  A  ++RFLC+LVN  V+ A    S+  +  +  G  +E D  +P  R D Y+Y V+S LPWV   L ++    +  +L    AY  +R  L+L      +L             +    HP E   D +   ++ +K         +   +   I +P+      L + ++H +PP T   P P       +P+P    F  FD  DA  G       +   +ER+V+ E L   L +          +R + AA++     +SY    ++   + + EV+   L Q PS    D+ Y   L+      P +   +      +    L+ ++   + +  NWF  HL+N QF +  W+ WA  +++    D P+  F+R  L+   R SY  ++ + +PA+     P +P ++  Y       E ++A    S  ++          ++ +    E+   L     P  D         +PL ++ +    L  ++  + +H  + L K    F+ L E+DE +L ++  + +VW   PQM+ + L+ ++R  +V    +  W+  PE +  + +  ++  L   +  +++ ++ +    E   + L     H  +    E++  +    EE +E     VE+AQ    +L L + +    +L E L        +   A     R  L QI+LQ
Sbjct:    3 RRRHSDENDGGQ---PHKRRRTSEPLEIEDRLESLICRVGE-----KSTSSLESNLEGLAGVLEADLPNYKNKILRILCFVARLLPEKMTVYTTLVGLLNARNYNFGGEFVEAMIRHLKETIKLNAYNEAIYLVRFLCDLVNCHVIAA---PSMVAMFESFVGVTQEED--IPQVRSDWYVYAVLSSLPWVGKELYEKKDVEMDQILSQIEAYLKQRQKLHLS-----ILQVW----------SAEKPHPQEEYLDCLWAQVQKLK---------KDRWQERHIQRPYLAFDSVLCEALQHNLPPFT---PPPHT-EDSVYPVP-RVIFRMFDYTDAPEGPVMPGSHS---VERFVIEENLHCILKS-------HWRERKTCAAQL-----LSYPEKNKIPLNYHIVEVIFGELFQLPSPPQIDVMYTTLLIELCKLQPGSLPQVLAQASEMLYTRLDTMNTTCIDRFINWFSHHLSNFQFRWN-WEDWADCLSQDL--DKPKPQFVREVLEKCMRLSYHQRILDIVPATFSALYPANPSNVIKY-----GDESNSALPGYSVAVI------LTNAIKNKASDKEIFNILKDIPNPNQDDDDDEGIGFNPL-KIEVFVQTLLNLASKSFSHSFSALAKFHDIFKALSESDEGKLHILRVVYDVWKNHPQMIAVLLDKMIRTQIVDCAAVANWIFSPELSPDFTRFYIWEILHSTIRKMNKHVQKIQKELEDTKQRLAKQHKHRDSDDNDEDSGRKDGPLEEQIERLQEKVESAQSEQKNLFLVIFQRFIMILTEHLVRCETGGIDVNTAWYKNCRERLQQIFLQ 754          
BLAST of EWM30449.1 vs. NCBI_GenBank
Match: gi|1043437109|gb|OCA49735.1| (hypothetical protein XENTR_v90001840mg [Xenopus tropicalis])

HSP 1 Score: 194.126 bits (492), Expect = 8.795e-48
Identity = 201/819 (24.54%), Postives = 354/819 (43.22%), Query Frame = 0
Query:  102 GDRGPPAKKPKTKED-EIMTQIKALLVRVGDFHHITTSLSSLEENVEGLAGALGDELATFGDLIADFVLTAACQLSLQTPVYATLVGLLNARDEDFGAKVVQGGAVRLDAMIRQGRWINAKLVLRFLCELVNARVVKAEGEGSLGEVLTTLAGPLKEPDAAVPPARKDLYLYLVVSVLPWVWDALAQEWPDGLPALLETTFAYADRRVPLYLKKGVRCVLDASLEDEEDGVEEAGASGHPVEPATDSIQRALRVVKTLAATLEEGQASLEINAIVKPWKGVKEELSQGIRHAIPPLTLPDPDPMVLATGGFPLPLHPCFAEFDLFDAESGGQAASVATLPPIERWVLRECLKDSLVTFRPYVNEAGNKRGSFAAEVEQLYSISYLAPPEVATEFLVAEVLLLWLVQRPS---RDLAYLHRLLLQVVQTPKAAGSMALGLHILFQDYLEVLDHGAVTQLANWFGAHLTNTQFTFPYWDAWAGLVAEQEAEDHPQRYFLRRALDVAARQSYVGKVKEHIPASLHPYVPEDPYSLSPY-------LP-RAAAVEEDNAAD--AASTQILKVLVRHFQAVLQGQMPAAEVQAWLDSSVAPPADIATSDPLWRVTLVAHALSRISDDTVAHLPALLEKCLGWFRQLFEADEHQLRMVEALAEVWAGSPQMLLLALNAVMRMHMVLPVNLVAWLVRPETARRYAQDALYHDLF--VDAVDRSLESVANYGELISRALG---PHPPATGQSEEARARQCAGEETVEHGIVAVENAQ----DLLLELVEGLSKVLGEGLASSAEQASEWVRAGLAYLRGTL-QIYLQ 896
             D GP  K+ KT E  EI  ++++L+ RVG+      S SSLE N+EGLAG L  +L  +   I   + + A  L  +  VY TLVGLLNAR+ +FG + V+     L   I+   +  A  ++RFLC+LVN  V+ A    S+  +  +  G  +E D  +P  R D Y+Y V+S LPWV   L ++    +  +L    AY  +R  L++      +L             +    HP E   D +   ++ +K         +   +   I++P+      L + ++H +PP T   P P       +P+P    F  FD  DA  G       +   +ER+V+ E L       R +  E    R + AA++     +SY    ++   + + EV+   L Q P+    D+ Y   L+      P +   +      +    L+ ++   + +  NWF  HL+N QF +  W+ W+  +++    D P+  F+R  L+   R SY  ++ + +PA+     P  P  +  Y       LP  + AV   NA    A+  +I  +L           +P        D  +       + +PL ++ +    L  ++  + +H  + L K    F+ L E+DE +L ++  + ++W   PQM+ + ++ ++R  +V    +  W+  PE +R + +  ++  L   +  +++ ++ +    E +   L     H  +    E++  +    EE +E     VE+AQ    +L L + +    +L E L        +   A     R  L QI+LQ
Sbjct:   10 NDGGPHHKRRKTSEPLEIEDRLESLICRVGE-----KSTSSLESNLEGLAGVLEADLPNYKSKILRILCSVARTLPEKMTVYTTLVGLLNARNYNFGGEFVEAMIRHLKETIKLNAYNEAVYLVRFLCDLVNCHVIAA---PSMVAMFESFVGVTQEED--IPQVRSDWYVYAVLSSLPWVGKELYEKKDVEMDRILSQIEAYLKQRQKLHVS-----ILQVW----------SAEKPHPQEEYLDCLWAQIQKLK---------KDRWQERHILRPYLAFDSVLCEALQHNLPPFT---PPPHT-EDSVYPVP-RVVFRMFDYTDAPEGPVMPGSHS---VERFVIEENLH---CILRSHWRE----RKTCAAQL-----LSYPEKNKIPLNYQIVEVIFGELFQLPNPPHLDVMYTTLLIELCKLQPGSLPQVLAQASEMLYTRLDTMNTICIDRFINWFSHHLSNFQFRWN-WEDWSDCLSQDL--DKPKPQFVREVLEKCMRLSYHQRILDIVPAAFSALYPASPSCVFKYGDESNSALPGYSVAVALTNAIKNKASDKEIFNIL---------KDIPNPNQDDDDDEGI-------SFNPL-KIEVFVQTLLSLASKSFSHSFSALAKFHDIFKALSESDEGKLHILRVVYDIWKNHPQMIAVLVDKMIRTQIVDCAAVANWIFSPELSRDFPRFYIWEILHSTIRKMNKHVQKIQKELEDMKLRLAKQHKHRDSDDNDEDSGRKDGPLEEQIERLQEKVESAQSEQKNLFLVIFQRFIMILTEHLVRCETGGIDVNTAWYKNCRERLQQIFLQ 754          
BLAST of EWM30449.1 vs. NCBI_GenBank
Match: gi|55742230|ref|NP_001006788.1| (nuclear cap-binding protein subunit 1 [Xenopus tropicalis] >gi|82183369|sp|Q6DIE2.1|NCBP1_XENTR RecName: Full=Nuclear cap-binding protein subunit 1; AltName: Full=80 kDa nuclear cap-binding protein; Short=CBP80; Short=NCBP 80 kDa subunit >gi|49523182|gb|AAH75600.1| nuclear cap binding protein subunit 1, 80kDa [Xenopus tropicalis] >gi|89273889|emb|CAJ83816.1| nuclear cap binding protein subunit 1, 80kDa [Xenopus tropicalis])

HSP 1 Score: 193.741 bits (491), Expect = 1.096e-47
Identity = 201/819 (24.54%), Postives = 354/819 (43.22%), Query Frame = 0
Query:  102 GDRGPPAKKPKTKED-EIMTQIKALLVRVGDFHHITTSLSSLEENVEGLAGALGDELATFGDLIADFVLTAACQLSLQTPVYATLVGLLNARDEDFGAKVVQGGAVRLDAMIRQGRWINAKLVLRFLCELVNARVVKAEGEGSLGEVLTTLAGPLKEPDAAVPPARKDLYLYLVVSVLPWVWDALAQEWPDGLPALLETTFAYADRRVPLYLKKGVRCVLDASLEDEEDGVEEAGASGHPVEPATDSIQRALRVVKTLAATLEEGQASLEINAIVKPWKGVKEELSQGIRHAIPPLTLPDPDPMVLATGGFPLPLHPCFAEFDLFDAESGGQAASVATLPPIERWVLRECLKDSLVTFRPYVNEAGNKRGSFAAEVEQLYSISYLAPPEVATEFLVAEVLLLWLVQRPS---RDLAYLHRLLLQVVQTPKAAGSMALGLHILFQDYLEVLDHGAVTQLANWFGAHLTNTQFTFPYWDAWAGLVAEQEAEDHPQRYFLRRALDVAARQSYVGKVKEHIPASLHPYVPEDPYSLSPY-------LP-RAAAVEEDNAAD--AASTQILKVLVRHFQAVLQGQMPAAEVQAWLDSSVAPPADIATSDPLWRVTLVAHALSRISDDTVAHLPALLEKCLGWFRQLFEADEHQLRMVEALAEVWAGSPQMLLLALNAVMRMHMVLPVNLVAWLVRPETARRYAQDALYHDLF--VDAVDRSLESVANYGELISRALG---PHPPATGQSEEARARQCAGEETVEHGIVAVENAQ----DLLLELVEGLSKVLGEGLASSAEQASEWVRAGLAYLRGTL-QIYLQ 896
             D GP  K+ KT E  EI  ++++L+ RVG+      S SSLE N+EGLAG L  +L  +   I   + + A  L  +  VY TLVGLLNAR+ +FG + V+     L   I+   +  A  ++RFLC+LVN  V+ A    S+  +  +  G  +E D  +P  R D Y+Y V+S LPWV   L ++    +  +L    AY  +R  L++      +L             +    HP E   D +   ++ +K         +   +   I++P+      L + ++H +PP T   P P       +P+P    F  FD  DA  G       +   +ER+V+ E L       R +  E    R + AA++     +SY    ++   + + EV+   L Q P+    D+ Y   L+      P +   +      +    L+ ++   + +  NWF  HL+N QF +  W+ W+  +++    D P+  F+R  L+   R SY  ++ + +PA+     P  P  +  Y       LP  + AV   NA    A+  +I  +L           +P        D  +       + +PL ++ +    L  ++  + +H  + L K    F+ L E+DE +L ++  + ++W   PQM+ + ++ ++R  +V    +  W+  PE +R + +  ++  L   +  +++ ++ +    E +   L     H  +    E++  +    EE +E     VE+AQ    +L L + +    +L E L        +   A     R  L QI+LQ
Sbjct:   10 NDGGPHHKRRKTSEPLEIEDRLESLICRVGE-----KSTSSLESNLEGLAGVLEADLPNYKSKILRILCSVARTLPEKMTVYTTLVGLLNARNYNFGGEFVEAMIRHLKETIKLNAYNEAVYLVRFLCDLVNCHVIAA---PSMVAMFESFVGVTQEED--IPQVRSDWYVYAVLSSLPWVGKELYEKKDVEMDRILSQIEAYLKQRQKLHVS-----ILQVW----------SAEKPHPQEEYLDCLWAQIQKLK---------KDRWQERHILRPYLAFDSVLCEALQHNLPPFT---PPPHT-EDSVYPVP-RVVFRMFDYTDAPEGPVMPGSHS---VERFVIEENLH---CILRSHWRE----RKTCAAQL-----LSYPEKNKIPLNYHIVEVIFGELFQLPNPPHLDVMYTTLLIELCKLQPGSLPQVLAQASEMLYTRLDTMNTICIDRFINWFSHHLSNFQFRWN-WEDWSDCLSQDL--DKPKPQFVREVLEKCMRLSYHQRILDIVPAAFSALYPASPSCVFKYGDESNSALPGYSVAVALTNAIKNKASDKEIFNIL---------KDIPNPNQDDDDDEGI-------SFNPL-KIEVFVQTLLSLASKSFSHSFSALAKFHDIFKALSESDEGKLHILRVVYDIWKNHPQMIAVLVDKMIRTQIVDCAAVANWIFSPELSRDFPRFYIWEILHSTIRKMNKHVQKIQKELEDMKLRLAKQHKHRDSDDNDEDSGRKDGPLEEQIERLQEKVESAQSEQKNLFLVIFQRFIMILTEHLVRCETGGIDVNTAWYKNCRERLQQIFLQ 754          
BLAST of EWM30449.1 vs. NCBI_GenBank
Match: gi|1101379635|dbj|GAV02103.1| (hypothetical protein RvY_12708 [Ramazzottius varieornatus])

HSP 1 Score: 192.2 bits (487), Expect = 4.111e-47
Identity = 183/796 (22.99%), Postives = 350/796 (43.97%), Query Frame = 0
Query:   75 GGYHGNHG---GGGGRYRGDRARYNQDRRGGDRGPPAKKPKTKEDEIMTQIKALLVRVGDFHHITTSLSSLEENVEGLAGALGDELATFGDLIADFVLTAACQLSLQTPVYATLVGLLNARDEDFGAKVVQGGAVRLDAMIRQGRWINAKLVLRFLCELVNARVVKAEGEGSLGEVLTTLAGPLKEPDAAVPPARKDLYLYLVVSVLPWVWDALAQEWPDGLPALLETTFAYADRRVPLYLKKGVRCVLDASLEDEEDGVEEAGASGHPVEPATDSIQRALRVVKTLAATLEEGQASLEINAIVKPWKGVKEELSQGIRHAIPPLTLPDPDPMVLATGGFPLPLHPCFAEFDLFDAESGGQAASVATLPPIERWVLRECLKDSLVTFRPYVNEAGNKRGSFAAEVEQLYSISY-LAPPEVATEFLVAEVLLLWLVQ---RPSRDLAYLHRLL-LQVVQTPKAAGSMALGLHILFQDYLEVLDHGAVTQLANWFGAHLTNTQFTFPYWDAWAGLVAEQEAEDHPQRYFLRRALDVAARQSYVGKVKEHIPASLHPYVPEDPYSLSPY----------LPRAAAVEEDNAADAASTQILKVLVRHFQAVLQGQMPAAEVQAWLDSSVAPPADIATSDPLWRVTLVAHALSRISDDTVAHLPALLEKCLGWFRQLFEADEHQLRMVEALAEVWAGSPQMLLLALNAVMRMHMVLPVNLVAWLVRPETARRYAQDALYHDLFVDAVDRSLESVANYGELISRALGPHPPATGQSEEARARQCAGEETVEHGIVAVENAQD 852
            GG +   G   G GG  R D+ ++++++ GG       + ++   +I  ++ +L+ R+G+      S +SLE N+  LA  L  ++A F D I + +L  +  +  +  +Y  L G+LN  +  FG + V G A R   ++  G +  A+LVLR + + VN+ +V A       EVL  +       +  VP  R D Y + V+S +PW+ + +    PDGL  LLE   +Y  RR  +++   +R +                 S  P+ P  D +      V+ L               I++P+  +   LS+G  H +P +  P  +        +PLP    F  FD  D   G        LPP+   + R  ++D L      +++    R   A  +     ++Y  A P +  +++V EV+L  L+Q    P +++ Y   +L L  V+      ++AL + +L++  +E L+  ++ +LA+WF  HL+N +F +  W+ W+  +  Q  +DHP+  F+   +    R SY G++ E +P     ++P++P+    +          + +A  V E        T+IL+++          ++P  E  +  D            +PL ++ +  H +  +   T  HL   L K     R L   ++ Q+  +++L + +      +++ ++ ++RM +V   ++V W+  PE +  ++   ++  L         +++     L+ ++      A  +S+EA   +   EE     + A+E A D
Sbjct:    4 GGLYTREGALRGRGGYMRSDQPQFHRNQ-GGAPLEDESEQESGPSDIEKRLDSLITRLGE-----RSNASLETNIRNLAKVLSGDIANFKDAILNILLKCSTTMPEKISIYTCLAGVLNTENYTFGGEFVDGLARRFRDLLSAGAYRQAELVLRVIADCVNSNLVSASSLLMFMEVLLEVTY-----EKNVPQVRSDWYAFAVLSCMPWMGERMNFSKPDGLRKLLEEVLSYITRRKKVHV-AALRVI----------------KSDDPL-PQEDYLDSLWTQVEDLK------NRQWREKHILRPYTSLDSSLSKGQAHNLPQIIPPSYE----EDHQYPLP-RVVFRLFDYTDCPEG------TVLPPMNS-IERFLIEDDLTRL---IDQHHEDRKQCAVVL-----LNYPTAQPNIPIDYIVTEVVLGQLMQLPKSPHKEVMYGSMILELCKVRQDVMLQTLALAVSLLYER-IEHLNISSLHRLASWFAYHLSNYEFRWT-WEDWSDCL--QVDKDHPKARFVTEIIQNCVRLSYYGRIAEIVPQRFKVFLPDEPFLRQKFDVENPETIEGVKQALEVHEAARDKKEVTRILEII---------KEVPRPEGTSETD-----------FNPL-QIEVFVHVILGMYAKTFTHLFTALNKYAPVMRDLLTGEQEQIFFLQSLYDCFVNREYTIIVLIDRLLRMQLVDATSVVNWIFSPEMSMYFSDHHVWEIL--------QQTIHRVSTLVQKSQSELNEARARSKEAADAEVVREED---AVEALEEALD 708          
BLAST of EWM30449.1 vs. NCBI_GenBank
Match: gi|1069317651|ref|XP_018092279.1| (PREDICTED: nuclear cap-binding protein subunit 1-B isoform X1 [Xenopus laevis])

HSP 1 Score: 188.734 bits (478), Expect = 1.025e-46
Identity = 177/707 (25.04%), Postives = 311/707 (43.99%), Query Frame = 0
Query:   92 RARYNQDRRGGDRGPPAKKPKTKED-EIMTQIKALLVRVGDFHHITTSLSSLEENVEGLAGALGDELATFGDLIADFVLTAACQLSLQTPVYATLVGLLNARDEDFGAKVVQGGAVRLDAMIRQGRWINAKLVLRFLCELVNARVVKAEGEGSLGEVLTTLAGPLKEPDAAVPPARKDLYLYLVVSVLPWVWDALAQEWPDGLPALLETTFAYADRRVPLYLKKGVRCVLDASLEDEEDGVEEAGASGHPVEPATDSIQRALRVVKTLAATLEEGQASLEINAIVKPWKGVKEELSQGIRHAIPPLTLPDPDPMVLATGGFPLPLHPCFAEFDLFDAESGGQAASVATLPPIERWVLRECLKDSLVTFRPYVNEAGNKRGSFAAEVEQLYSISYLAPPEVATEFLVAEVLLLWLVQRPSR---DLAYLHRLLLQVVQTPKAAGSMALGLHILFQDYLEVLDHGAVTQLANWFGAHLTNTQFTFPYWDAWAGLVAEQEAEDHPQRYFLRRALDVAARQSYVGKVKEHIPASLHPYVPEDPYSLSPYLPRAAAVEEDNAADAASTQILKVLVRHFQAVLQGQMPAAEVQAWLDSSVAPPADIATS-----DPLWRVTLVAHALSRISDDTVAHLPALLEKCLGWFRQLFEADEHQLRMVEALAEVWAGSPQMLLLALNAVMRMHMVLPVNLVAWLVRPETARRYAQDAL 789
            R R++ +  GG    P K+ +T E  EI  ++++L+ RVG+      S SSLE N+EGLAG L  +L  + + I   +   A  L  +  VY TLVGLLNAR+ +FG + V+     L   I+   +  A  ++RFLC+LVN  V+ A    S+  +  +  G  +E D  +P  R D Y+Y V+S LPWV   L ++    +  +L    AY  +R  L+L      +L             +    HP E   D +   ++ +K         +   +   I +P+      L + ++H +PP T   P P       +P+P    F  FD  DA  G       +   +ER+V+ E L   L            +R + AA++     +SY    ++   + + EV+   L Q PS    D+ Y   L+      P +   +      +    L+ ++   + +  NWF  HL+N QF +  W+ WA  +++    D P+  F+R  L+   R SY  ++ + +PA+     P +P ++  Y       E ++A    S  ++          ++ +    E+   L     P  D         +PL ++ +    L  ++  + +H  + L K    F+ L E+DE +L ++  + +VW   PQM+ + L+ ++R  +V    +  W+  PE +  + ++ +
Sbjct:    3 RRRHSDENDGGQ---PHKRRRTSEPLEIEDRLESLICRVGE-----KSTSSLESNLEGLAGVLEADLPNYKNKILRILCFVARLLPEKMTVYTTLVGLLNARNYNFGGEFVEAMIRHLKETIKLNAYNEAIYLVRFLCDLVNCHVIAA---PSMVAMFESFVGVTQEED--IPQVRSDWYVYAVLSSLPWVGKELYEKKDVEMDQILSQIEAYLKQRQKLHLS-----ILQVW----------SAEKPHPQEEYLDCLWAQVQKLK---------KDRWQERHIQRPYLAFDSVLCEALQHNLPPFT---PPPHT-EDSVYPVP-RVIFRMFDYTDAPEGPVMPGSHS---VERFVIEENLHCIL-------KSHWRERKTCAAQL-----LSYPEKNKIPLNYHIVEVIFGELFQLPSPPQIDVMYTTLLIELCKLQPGSLPQVLAQASEMLYTRLDTMNTTCIDRFINWFSHHLSNFQFRW-NWEDWADCLSQDL--DKPKPQFVREVLEKCMRLSYHQRILDIVPATFSALYPANPSNVIKY-----GDESNSALPGYSVAVI------LTNAIKNKASDKEIFNILKDIPNPNQDDDDDEGIGFNPL-KIEVFVQTLLNLASKSFSHSFSALAKFHDIFKALSESDEGKLHILRVVYDVWKNHPQMIAVLLDKMIRTQIVDCAAVANWIFSPELSPDFTRETV 637          
BLAST of EWM30449.1 vs. NCBI_GenBank
Match: gi|148229808|ref|NP_001085510.1| (nuclear cap-binding protein subunit 1-A [Xenopus laevis] >gi|82184589|sp|Q6GQ80.1|NBP1A_XENLA RecName: Full=Nuclear cap-binding protein subunit 1-A >gi|49115030|gb|AAH72867.1| MGC80276 protein [Xenopus laevis] >gi|1050398525|gb|OCU00715.1| hypothetical protein XELAEV_18006494mg [Xenopus laevis])

HSP 1 Score: 186.808 bits (473), Expect = 2.275e-45
Identity = 199/829 (24.00%), Postives = 355/829 (42.82%), Query Frame = 0
Query:   92 RARYNQDRRGGDRGPPAKKPKTKED-EIMTQIKALLVRVGDFHHITTSLSSLEENVEGLAGALGDELATFGDLIADFVLTAACQLSLQTPVYATLVGLLNARDEDFGAKVVQGGAVRLDAMIRQGRWINAKLVLRFLCELVNARVVKAEGEGSLGEVLTTLAGPLKEPDAAVPPARKDLYLYLVVSVLPWVWDALAQEWPDGLPALLETTFAYADRRVPLYLKKGVRCVLDASLEDEEDGVEEAGASGHPVEPATDSIQRALRVVKTLAATLEEGQASLEINAIVKPWKGVKEELSQGIRHAIPPLTLPDPDPMVLATGGFPLPLHPCFAEFDLFDAESGGQAASVATLPPIERWVLRECLKDSLVTFRPYVNEAGNKRGSFAAEVEQLYSISYLAPPEVATEFLVAEVLLLWLVQRPS---RDLAYLHRLLLQVVQTPKAAGSMALGLHILFQDYLEVLDHGAVTQLANWFGAHLTNTQFTFPYWDAWAGLVAEQEAEDHPQRYFLRRALDVAARQSYVGKVKEHIPASLHPYVPEDPYSLSPY-------LP---RAAAVEEDNAADAASTQILKVLVRHFQAVLQGQMPAAEVQAWLDSSVAPPADIATSDPLWRVTLVAHALSRISDDTVAHLPALLEKCLGWFRQLFEADEHQLRMVEALAEVWAGSPQMLLLALNAVMRMHMVLPVNLVAWLVRPETARRYAQDALYHDLF--VDAVDRSLESVANYGELISRALG---PHPPATGQSEEARARQCAGEETVEHGIVAVENAQ----DLLLELVEGLSKVLGEGLASSAEQASEWVRAGLAYLRGTL-QIYLQ 896
            R R++ +  GG      K+ KT E  EI  ++++L+ RVG+      S SSLE N+EGLAG L  +L  +   I   +   A  L  +  VY+TLVGLLNAR+ +FG + V+     L   I+   +  A  ++RFL +LVN  V+ A    S+  +  +  G  +E D  +P  R D Y+Y V+S LPWV   L ++    +  +L    AY  +R  L++      +L             +    HP E   D +   ++ +K         +   +   I++P+      L + ++H +PP T   P P       +P+P    F  FD  DA  G       +   +ER+V+ E L   L +          +R + AA++     +SY    ++   + + EV+   L Q P+    D+ Y   L+      P +   +      +    L+ ++   + +  NWF  HL+N QF +  W+ WA  +++   +  PQ  F+R  L+   R SY  ++ + +PA+     P  P  +  Y       LP    A  +  +    A+  +I  +L           +P        D  +       + +PL ++ +   +L  ++  + +H  + L K    F+ L E+DE +L ++    +VW   PQM+ + ++ ++R  +V    +  W+  PE +  + +  ++  L   +  +++ ++ +    E   + L     H  +    E++  +    EE +E     VE+AQ    +L L + +    +L E L      A +   A     R  L QI+LQ
Sbjct:    3 RRRHSDENDGGQ---AHKRRKTSEPLEIEDRLESLICRVGE-----KSTSSLESNLEGLAGVLEADLPNYKSKILRILCFVARLLPEKMSVYSTLVGLLNARNYNFGGEFVEAMIRHLKETIKLNAYSEAVYLVRFLSDLVNCHVIAA---PSMVAMFESFVGVTQEED--IPQVRSDWYVYAVLSSLPWVGKELYEKKDVEMDRILSQIEAYLKQRQKLHVS-----ILQVW----------SAEKPHPQEEYLDCLWAQIQKLK---------KDRWQERHILRPYLAFDSVLCEALQHNLPPFT---PPPHT-EDSVYPVP-RVVFRMFDYTDAPEGPVMPGSHS---VERFVIEENLHCILKS-------HWRERKTCAAQL-----LSYPEKNKIPLNYHIVEVIFGELFQLPTPPHIDVMYTTLLIELCKLQPGSLPQVLAQASEMLYTRLDTMNTICIDRFINWFSHHLSNFQFRWN-WEDWADCLSQDLNKPKPQ--FVREVLEKCMRLSYHQRILDIVPATFSALYPASPSCVFKYGDESNSALPGYSVAVTLTNEIKNKASDKEIFNIL---------KDIPNPNQDDDDDEGI-------SFNPL-KIEVFVQSLLNLASKSFSHAFSALAKFHDIFKALSESDEGKLHILRVAYDVWKNHPQMIAVLVDKMIRTQIVDCAAVANWIFSPELSHDFTRFYIWEILHSTIRKMNKHVQKIQKELEETKQRLAKQHKHRDSDDNDEDSGRKDGPLEEQIERLQEKVESAQSEQKNLFLVIFQRFIMILTEHLVRCETGAIDVNTAWYKNCRERLQQIFLQ 754          
BLAST of EWM30449.1 vs. NCBI_GenBank
Match: gi|328711986|ref|XP_001947457.2| (PREDICTED: nuclear cap-binding protein subunit 1 [Acyrthosiphon pisum])

HSP 1 Score: 187.193 bits (474), Expect = 2.312e-45
Identity = 171/737 (23.20%), Postives = 325/737 (44.10%), Query Frame = 0
Query:   81 HGGGGGRYRGDRARYNQDRRGGDRGPPAKKPKTKEDEIMTQIKALLVRVGDFHHITTSLSSLEENVEGLAGALGDELATFGDLIADFVLTAACQLSLQTPVYATLVGLLNARDEDFGAKVVQGGAVRLDAMIRQGRWINAKLVLRFLCELVNARVVKAEGEGSLGEVLTTLAGPLKEPDAAVPPARKDLYLYLVVSVLPWVWDALAQEWPDGLPALLETTFAYADRRVPLYLKKGVRCVLDASLEDEEDGVEEAGASGHPVEPATDSIQRALRVVKTLAATLEEGQASLEINAIVKPWKGVKEELSQGIRHAIPPLTLPDPDPMVLATGGFPLPLHPCFAEFDLFDAESGGQAASVATLPPIERWVLRECLKDSLVTFRPYVNEAGNKRGSFAAEVEQLYSISYLAPPEVATEFLVAEVLLLWLVQRPSRDLAYLHRLL------LQVVQTPKAAGSMALGLHILFQDYLEVLDHGAVTQLANWFGAHLTNTQFTFPYWDAWAGLVAEQEAEDHPQRYFLRRALDVAARQSYVGKVKEHIPASLHPYVPEDPYSLSPYLPRAAAVEEDNAADAASTQIL-KVLVRHFQAVLQGQMPAAEVQAWLDSSVAPPADIATSDPLWRVTLVAHALSRISDDTVAHLPALLEKCLGWFRQLFEADEHQLRMVEALAEVWAGSPQMLLLALNAVMRMHMVLPVNLVAWLVR----PETARRYAQDALYHDLFVDAVDRSLESVA 806
            H      Y  DR  Y + RRGG          ++ +++  ++++L+++VG+      + S++E N+EGLA  L  ++  F   +   ++  A  +  +  +Y+TLVGLLNA++ +FG + V+         ++   W  A++VLRF+ +LVN  VV A    S  +++ +L    KE    VP  RKD Y Y V+S LPWV   L ++    L  LL T   Y ++R     KK V  +   S +             HP E   + +   ++ +K           S     I +P+      L + ++H +PP+ +P P         +P+P    +  FD  D   G       +   IER+++ E L+         ++ +   R   A  +     ++++   +V  E+ + EV+   +  +P     YL  +       L  + T      +A    IL+   +E +   A  +  +WF  HL+N +F++  W  WA  +A     +HP+  F+R  L  A R S+  ++++ +P    P +PE P     Y    +++     ++   T+I  K        +L+  + +       +  +  PADI  S+P  +V      L  I+  + +H  A + K +  F+ L E D+ QL+++ +  ++W+   QML + ++ +++  ++   ++  W+      PE  + Y  + L   L ++ + R ++ + 
Sbjct:    7 HDSYEDVYGADRG-YKKRRRGG----------SESNDLEDRLESLVLKVGE-----NTTSTIESNLEGLASVLDGDIQNFKKKVLKLLVECAVNMPEKCTIYSTLVGLLNAKNYNFGGEFVENIVRSFKDSLKNNSWNEARVVLRFIGDLVNCHVVSA---SSFVQLMGSLLDVTKE--DGVPNVRKDWYCYAVMSCLPWVGRELYEKRESPLEMLLTTIEVYLNKRP----KKHVNMLRIWSTD-----------VPHPQEEYLECLWNQVKKLK---------HDSWTETIIPRPYLTFDNVLCEALQHNLPPI-VPPPHHNACV---YPMPW-VVYRMFDYTDVTDGHIMPGAHS---IERFLVEEHLQQ-------IIDMSCKNRKECATNL-----MNFVHKNKVPLEYCIVEVIFSLMFHQPKP--KYLEVMFGSVFIELSKLSTNTMPLVLAQTTEILYSR-IESMHVCAFDRFVSWFAYHLSNFKFSWS-WQEWADCLALD--PEHPKPKFVREVLQKAMRLSFYERMRDIVPPDFEPLLPEKPEPKFKYAIEKSSLPGQFLSNTLLTKIRNKTTPEDIIEILKEPLMSE------NGEILEPADIGISNPT-KVDAFVQTLLFIASKSFSHAFAAITKFISVFKALGETDDGQLQILRSTFDLWSADQQMLTVLIDKMLKTQIIECSSVANWIFSKDMIPEFTKLYIWEIL--SLTINKMSRHVDRLT 663          
BLAST of EWM30449.1 vs. NCBI_GenBank
Match: gi|1168979329|ref|XP_020449680.1| (nuclear cap-binding protein subunit 1 [Monopterus albus])

HSP 1 Score: 186.422 bits (472), Expect = 2.929e-45
Identity = 193/802 (24.06%), Postives = 357/802 (44.51%), Query Frame = 0
Query:   92 RARYNQDRRGGDRGPPAKKPKTKED-EIMTQIKALLVRVGDFHHITTSLSSLEENVEGLAGALGDELATFGDLIADFVLTAACQLSLQTPVYATLVGLLNARDEDFGAKVVQGGAVRLDAMIRQGRWINAKLVLRFLCELVNARVVKAEGEGSLGEVLTTLAGPLKEPDAAVPPARKDLYLYLVVSVLPWVWDALAQEWPDGLPALLETTFAYADRRVPLYLKKGVRCVLDASLEDEEDGVEEAGASGHPVEPATDSIQRALRVVKTLAATLEEGQASLEINAIVKPWKGVKEELSQGIRHAIPPLTLPDPDPMVLATGGFPLPLHPCFAEFDLFDAESGGQAASVATLPPIERWVLRECLKDSLVTFRPYVNEAGNKRGSFAAEVEQLYSISYLAPPEVATEFLVAEVLLLWLVQRPS---RDLAYLHRLL-LQVVQTPKAAGSMALGLHILFQDYLEVLDHGAVTQLANWFGAHLTNTQFTFPYWDAWAGLVAEQEAEDHPQRYFLRRALDVAARQSYVGKVKEHIPASLHPYVPEDPYSLSPYLPRAAA--------VEEDNAAD--AASTQILKVLVRHFQAVLQGQMPAAEVQAWLDSSVAPPADIATSDPLWRVTLVAHALSRISDDTVAHLPALLEKCLGWFRQLFEADEHQLRMVEALAEVWAGSPQMLLLALNAVMRMHMVLPVNLVAWLVRPETARRYAQDALYHDLFV-DAVDRSLESVANYGELISRALGPHPPATGQSEEARARQCAGEETVEHGIVAVENAQDLLLELVEGLSKVLGEGLASSAEQAS 877
            R R++ +  GG      K+ +T E  EI  ++++L+ RVG+      S SSLE N+EGLAG L  +L  + + I   +   A  L  +  VY TLVGLLNAR+ +FG + V+    +L   ++   +  A  ++RFL +LVN  V+ A    ++ E   ++    +E D  VP  R D ++Y+V+S LPWV   L ++    +  LL     Y  RRV  ++      +L                  HP E   D +   ++ +K         +   +   I++P+      L + ++H +PP T P   P       +P+P    F  FD  DA  G       +   +ER+V+ E L   + T          +R + AA++     +SY    ++   + + EV+   L Q PS    D+ Y   L+ L  +Q       +A    +L+   L+ ++   + +L NWF  HL+N QF +  WD WA  +      D P+  F++  L+   R SY  ++ + +P +    +P +P  +  Y+   A+        +   NA    A++ +IL +L          ++P    +   D       ++ + +PL R+ +    L  ++  + +H  + L K     + L ++DE +L +++ + EVW   PQM+ + ++ ++R  +V    +  WL   + A  + +      LFV + +  ++  +  + + I + L        + +  R R   G+E +E      +N++D   +L E + ++  +  ++ +EQ +
Sbjct:    3 RRRHSDENDGGQ---AHKRRRTSEPIEIEDRLESLICRVGE-----KSTSSLESNLEGLAGVLEADLPNYKNKILRILCAVARLLPEKLTVYTTLVGLLNARNYNFGGEFVEAMIRQLKETLKNNLYNEAVYLVRFLSDLVNCHVIAAPSMVAMFENFVSVT---QEED--VPQVRSDWFVYVVLSCLPWVGKELYEKKDVEMDRLLSQVEGYLKRRVKTHVS-----MLQVW----------TAEKPHPQEEYLDCLWAQIQKLK---------KDRWQERHILRPYIAFDSVLCEALQHNLPPFTPPGHMP----DAQYPMP-RVVFRMFDYTDAPEGPVMPGSHS---VERFVIEENLHCIIKT-------HWKERKTCAAQL-----LSYPGKNKIPLNYHIVEVIFGELFQLPSPPHIDVMYTTLLIELCKLQPGSLPQVLAQATEMLYMR-LDTMNTTCIDRLINWFSHHLSNFQFRWS-WDDWADCLTVDL--DKPKPKFVKEVLEKCMRLSYHQRIVDIVPPTFSALIPAEPIFIYKYVDETASTLPGYPVSITVSNAIKNRASNEEILTIL---------KEVPNPNQEDDDD-------EVESFNPL-RIDVFMQTLLNLAAKSFSHSFSALGKFHEILKALTDSDEGKLHILKVVYEVWRNHPQMIAVLVDKMIRTQIVDCAAVANWLFSQDMAHEFTR------LFVWEILHSTIRKMNKHVQKIQKELEEAKDKLEKQQHKR-RDSVGDEDME------KNSEDEEGQLEEQIERLQEKVESAQSEQKN 713          
The following BLAST results are available for this feature:
BLAST of EWM30449.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585113112|gb|EWM30449.1|0.000e+0100.00nuclear cap-binding protein subunit 1 [Nannochloro... [more]
gi|148228517|ref|NP_001085472.1|4.656e-4924.73nuclear cap-binding protein subunit 1-B [Xenopus l... [more]
gi|1050395548|gb|OCT97738.1|2.684e-4824.39hypothetical protein XELAEV_18009967mg [Xenopus la... [more]
gi|1043437109|gb|OCA49735.1|8.795e-4824.54hypothetical protein XENTR_v90001840mg [Xenopus tr... [more]
gi|55742230|ref|NP_001006788.1|1.096e-4724.54nuclear cap-binding protein subunit 1 [Xenopus tro... [more]
gi|1101379635|dbj|GAV02103.1|4.111e-4722.99hypothetical protein RvY_12708 [Ramazzottius varie... [more]
gi|1069317651|ref|XP_018092279.1|1.025e-4625.04PREDICTED: nuclear cap-binding protein subunit 1-B... [more]
gi|148229808|ref|NP_001085510.1|2.275e-4524.00nuclear cap-binding protein subunit 1-A [Xenopus l... [more]
gi|328711986|ref|XP_001947457.2|2.312e-4523.20PREDICTED: nuclear cap-binding protein subunit 1 [... [more]
gi|1168979329|ref|XP_020449680.1|2.929e-4524.06nuclear cap-binding protein subunit 1 [Monopterus ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna235rna235Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications