EWM28337.1, cds2346 (CDS) Nannochloropsis gaditana

Overview
NameEWM28337.1
Unique Namecds2346
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:176996..177033 +
Alignment locationCM002459.1:177198..177363 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM28337.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100109g10.6605.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:176996..177033 +
CM002459.1supercontigCM002459.1:177198..177363 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM28337.1 vs. NCBI_GenBank
Match: gi|585110686|gb|EWM28337.1| (hypothetical protein Naga_100109g10 [Nannochloropsis gaditana])

HSP 1 Score: 135.576 bits (340), Expect = 2.069e-40
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0 
Query:    1 MRVMPSLLGQPSIAGVSPRQLHAGRRILVLVYAHTSHVTWVHLLPFKRFAHGHRLPQIRAFERKVLN 67
            MRVMPSLLGQPSIAGVSPRQLHAGRRILVLVYAHTSHVTWVHLLPFKRFAHGHRLPQIRAFERKVLN
Sbjct:    1 MRVMPSLLGQPSIAGVSPRQLHAGRRILVLVYAHTSHVTWVHLLPFKRFAHGHRLPQIRAFERKVLN 67
The following BLAST results are available for this feature:
BLAST of EWM28337.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585110686|gb|EWM28337.1|2.069e-40100.00hypothetical protein Naga_100109g10 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2354rna2354Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications