EWM28332.1, cds2344 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28332.1 vs. NCBI_GenBank
Match: gi|585110681|gb|EWM28332.1| (MtN3-like protein [Nannochloropsis gaditana]) HSP 1 Score: 503.827 bits (1296), Expect = 2.885e-180 Identity = 251/251 (100.00%), Postives = 251/251 (100.00%), Query Frame = 0 Query: 1 MGSLGILQTSASLTAVILNICPIFDEIPAIKRSRSTGDRSPLLFVAIWTNACLWMFYGVFIEAIHPIATTNFTGFLSGSYFLLTFYAYASPVAKTRFAQYFVLALSFVLSTATYCFFFPSPDTSRTQAHLGALCTLVTIAVYAAPLSTVLRALRLRSPKPISLFFALVGTLNSVLWGAYGILTADAWVYIPSVLGVFMCLTQAAVFFWFAVGRGGLEGGKESRGEGFGGKALFDFLSLQGDGGKEMQAALL 251 MGSLGILQTSASLTAVILNICPIFDEIPAIKRSRSTGDRSPLLFVAIWTNACLWMFYGVFIEAIHPIATTNFTGFLSGSYFLLTFYAYASPVAKTRFAQYFVLALSFVLSTATYCFFFPSPDTSRTQAHLGALCTLVTIAVYAAPLSTVLRALRLRSPKPISLFFALVGTLNSVLWGAYGILTADAWVYIPSVLGVFMCLTQAAVFFWFAVGRGGLEGGKESRGEGFGGKALFDFLSLQGDGGKEMQAALL Sbjct: 1 MGSLGILQTSASLTAVILNICPIFDEIPAIKRSRSTGDRSPLLFVAIWTNACLWMFYGVFIEAIHPIATTNFTGFLSGSYFLLTFYAYASPVAKTRFAQYFVLALSFVLSTATYCFFFPSPDTSRTQAHLGALCTLVTIAVYAAPLSTVLRALRLRSPKPISLFFALVGTLNSVLWGAYGILTADAWVYIPSVLGVFMCLTQAAVFFWFAVGRGGLEGGKESRGEGFGGKALFDFLSLQGDGGKEMQAALL 251
BLAST of EWM28332.1 vs. NCBI_GenBank
Match: gi|585110682|gb|EWM28333.1| (MtN3-like protein [Nannochloropsis gaditana]) HSP 1 Score: 448.743 bits (1153), Expect = 1.706e-158 Identity = 224/229 (97.82%), Postives = 225/229 (98.25%), Query Frame = 0 Query: 23 IFDEIPAIKRSRSTGDRSPLLFVAIWTNACLWMFYGVFIEAIHPIATTNFTGFLSGSYFLLTFYAYASPVAKTRFAQYFVLALSFVLSTATYCFFFPSPDTSRTQAHLGALCTLVTIAVYAAPLSTVLRALRLRSPKPISLFFALVGTLNSVLWGAYGILTADAWVYIPSVLGVFMCLTQAAVFFWFAVGRGGLEGGKESRGEGFGGKALFDFLSLQGDGGKEMQAALL 251 +F AIKRSRSTGDRSPLLFVAIWTNACLWMFYGVFIEAIHPIATTNFTGFLSGSYFLLTFYAYASPVAKTRFAQYFVLALSFVLSTATYCFFFPSPDTSRTQAHLGALCTLVTIAVYAAPLSTVLRALRLRSPKPISLFFALVGTLNSVLWGAYGILTADAWVYIPSVLGVFMCLTQAAVFFWFAVGRGGLEGGKESRGEGFGGKALFDFLSLQGDGGKEMQAALL Sbjct: 21 LFYSPTAIKRSRSTGDRSPLLFVAIWTNACLWMFYGVFIEAIHPIATTNFTGFLSGSYFLLTFYAYASPVAKTRFAQYFVLALSFVLSTATYCFFFPSPDTSRTQAHLGALCTLVTIAVYAAPLSTVLRALRLRSPKPISLFFALVGTLNSVLWGAYGILTADAWVYIPSVLGVFMCLTQAAVFFWFAVGRGGLEGGKESRGEGFGGKALFDFLSLQGDGGKEMQAALL 249
BLAST of EWM28332.1 vs. NCBI_GenBank
Match: gi|299470883|emb|CBN78832.1| (MtN3-like protein [Ectocarpus siliculosus]) HSP 1 Score: 110.153 bits (274), Expect = 7.366e-26 Identity = 70/215 (32.56%), Postives = 112/215 (52.09%), Query Frame = 0 Query: 7 LQTSASLTAVILNICPIFDEIPAIKRSRSTGDRSPLLFVAIWTNACLWMFYGVFIEAIHPIATTNFTGFLSGSYFLLTFYAYASPVAKTRFAQYFVLALSF--VLSTATYCF--FFPSPDT---------------SRTQAHLGALCTLVTIAVYAAPLSTVLRALRLRSPKPISLFFALVGTLNSVLWGAYGILTADAWVYIPSVLGVFMCLTQ 202 L+ SA +A +L + PI E ++RS+ G+RS FV +W ++ LW+ YG+FI I P TN G Y+ YA+A A + + Y + A +F + T+C F P P++ R Q LG + T Y APL+ +++ +R RS + +SL A+V + S LW +YG++ +A++Y+P+VLGV +TQ Sbjct: 5 LKLSALGSASLLFVAPI-HEFEEVRRSKHVGERSVFPFVCMWASSTLWLIYGLFIGDIVPTVVTNLLGLACSCYYC-AVYAWAVEPASRKSSTYNLFAATFLGICVVVTFCLGTFSPRPESWVSMQDADSTDSGGDERAQRFLGIAASAATAIQYGAPLAELVKVIRRRSTEGMSLALAVVSLVCSTLWMSYGVMLVNAFIYVPNVLGVCFSVTQ 217
BLAST of EWM28332.1 vs. NCBI_GenBank
Match: gi|952513707|gb|KRT80241.1| (hypothetical protein AMK59_8622 [Oryctes borbonicus]) HSP 1 Score: 86.2705 bits (212), Expect = 6.532e-17 Identity = 60/223 (26.91%), Postives = 111/223 (49.78%), Query Frame = 0 Query: 5 GILQTSASLTAVI-----LNICPIFDEIPAIKRSRSTGDRSPLLFVAIWTNACLWMFYGVFIEA-----IHPIATTNFTGFLSGSYFLLTFYAYASPVAKTRFAQYFVLALSFVLSTATYCFFFPSPDTSRTQAHLGALCTLVTIAVYAAPLSTVLRALRLRSPKPISLFFALVGTLNSVLWGAYGILTADAWVYIPSVLGVFMCLTQAAVFFWFAVGRGGLE 217 +L T+AS++ +I L IC + I R R TGD SP F++ + LW+ YG+ I ++ I +T F G++ + FY Y+ + ++ + F + +++T Y + S D + ++G LC ++T+ +AAPL++V+ L+ +S + L G + + W AYG+L D ++ IP+ LG + +Q +F + +E Sbjct: 8 NLLATTASISTLIQFLSGLFICKM------IARKRGTGDMSPFPFISGHLSTSLWLRYGLLINDFSLIFVNTIGSTLFLGYV------VVFYYYS--IKRSMIVKQFTGCMLLLVTTVLYSVW--SEDVLMVRRNIGTLCCVITVVFFAAPLTSVIHVLKTKSTDSLPFPIILTGFIVTSQWYAYGVLLKDEFIQIPNFLGTVLTFSQLCLFCIYPSKNQDIE 214
BLAST of EWM28332.1 vs. NCBI_GenBank
Match: gi|570334858|gb|ETO82806.1| (hypothetical protein F444_03097 [Phytophthora parasitica P1976]) HSP 1 Score: 85.1149 bits (209), Expect = 5.753e-16 Identity = 62/215 (28.84%), Postives = 105/215 (48.84%), Query Frame = 0 Query: 31 KRSRSTGDRSPLLFVAIWTNACLWMFYGVFIEAIHPIATTNFTGFLSGSYFLLTFYAYASPVAKTRFAQYFVLALSFVLSTATYCFFFPSPDTSR----TQAHLGALCTLVTIAVYAAPLSTVLRALRLRSPKPISLFFALVGTLNSVLWGAYGILTADAWVYIPSVLGVFMCLTQAAVFFWFAVGRGGLEGGKESRGEGFGGKALFDFLSLQGD 241 +++RST D S L V I+ N+ +FY I P+ T+ G + G + +FY +A+ + + F ++ S L+ Y F S T + T+ LG + T +YA+P++T++R +R ++ I +V LNS WG YG L + ++ +P+++GV + LTQ V F + R K+S + L D L + GD Sbjct: 34 RKNRSTADMSVLPCVMIFGNSYGAVFYAYAISNYLPLFATSMLGVIVGVFMTYSFYIWATD--RREVVRIFAISASVFLAVTVYGFLALSGVTGQSNHSTETTLGFIMVGFTTLMYASPMATIIRVVRTKTATSIPFTMGVVNVLNSFCWGVYGELIRNNFLLVPNIIGVTLSLTQMLVTFIY---RSKEVNDKQSVAT--SSEDLVDILVVPGD 241
BLAST of EWM28332.1 vs. NCBI_GenBank
Match: gi|1175866703|ref|XP_020587104.1| (bidirectional sugar transporter SWEET13-like [Phalaenopsis equestris]) HSP 1 Score: 84.3445 bits (207), Expect = 7.786e-16 Identity = 54/166 (32.53%), Postives = 85/166 (51.20%), Query Frame = 0 Query: 30 IKRSRSTGDRSPLLFVAIWTNACLWMFYGVFIEAIHPIATTNFTGFLSGSYFLLTFYAYASPVAKTRFAQYFVLALSFVLSTATYCFFFPSPDTSRTQAHLGALCTLVTIAVYAAPLSTVLRALRLRSPKPISLFFALVGTLNSVLWGAYGILTADAWVYIPSVLG 195 I R +ST D L +V +A LWMFY + + T N G + + +++ F YAS A+ + L +LS C S D+ R Q LG +C + ++ V+AAPLS + +R +S + + +L TL++V W +GI T D +V +P+VLG Sbjct: 37 IYRRKSTEDFQSLPYVVALLSAMLWMFYAFIKSNAYLLVTINSFGCVIETTYIIIFLIYASTKARVHTIKMMALLNVGLLSFIVLCILLISNDSLRLQV-LGWICVIFSVTVFAAPLSIIREVIRSKSVEYMPFTLSLFLTLSAVAWFFFGIFTKDIYVALPNVLG 201
BLAST of EWM28332.1 vs. NCBI_GenBank
Match: gi|551672866|ref|XP_005839189.1| (hypothetical protein GUITHDRAFT_92383 [Guillardia theta CCMP2712] >gi|428183351|gb|EKX52209.1| hypothetical protein GUITHDRAFT_92383 [Guillardia theta CCMP2712]) HSP 1 Score: 83.1889 bits (204), Expect = 1.260e-15 Identity = 60/226 (26.55%), Postives = 109/226 (48.23%), Query Frame = 0 Query: 6 ILQTSASLTAVILNICPIFDEIPAI---KRSRSTGDRSPLLFVAIWTNACLWMFYGVFIEAIHPIATTNFTGFLSGSYFLLT-FYAYASPVAKTRFAQYFVLALSFVLSTA-TYCFFFPSPDTSRTQAHLGALCTLVTIAVYAAPLSTVLRALRLRSPKPISLFFALVGTLNSVLWGAYGILTADAWVYIPSVLGVFMCLTQAAVFFWFAVGRGGLEGGKESRGEG 226 I++ A VIL+ F +PAI +R+++ G+ +P FV ++ NA W+ Y + + A NF G L G +++LT +Y AS + R +S L + C+F D LG ++ + ++A+PLS+ + ++ +S I+ FA++ +N +W YG+ D ++ IP+ LG+ + L Q A+ F F + + +G Sbjct: 9 IIEVVAPALGVILSTGLGFGPLPAILKCRRNKTLGETNPDPFVMLFGNAVGWIIYAASTKNAYVFAG-NFFGVLLGMFYVLTGYYLTASDTIRRRLEIMMGTVISLWLIVGYSACYF---EDVKHRNDLLGITANILCLTLFASPLSSAAKVIQTKSAASINPIFAVMQVVNCTMWTTYGLAINDIFLLIPNALGLVLGLMQCALLFLFRGAKANQNSEPAASEDG 230
BLAST of EWM28332.1 vs. NCBI_GenBank
Match: gi|1207971373|ref|XP_021376428.1| (sugar transporter SWEET1-like [Mizuhopecten yessoensis] >gi|1205888417|gb|OWF39360.1| Sugar transporter SWEET1 [Mizuhopecten yessoensis]) HSP 1 Score: 82.8037 bits (203), Expect = 1.419e-15 Identity = 58/193 (30.05%), Postives = 97/193 (50.26%), Query Frame = 0 Query: 14 TAVILNICPIFDEIPAIKRSRSTGDRSPLLFVAIWTNACLWMFYGVFIEAIHPIATTNFTGFLSGSYFLLTFYAYASPVAKTRFAQYFVLALSFVLSTATYCFFFPSPDTSRTQAHLGALCTLVTIAVYAAPLSTVLRALRLRSPKPISLFFALVGTLNSVLWGAYGILTADAWVYIPSVLGVFMCLTQAAVF 206 T+VI+ + I + IK+ STGD SP+ F+ + ACLW YG+ I+ I + N L ++L+ FY + V K++F + F ++ + Y ++ D + AH G+ C L++I YAAPL+++ +R RS + +S + ++ W YGI D V + LG +C Q +F Sbjct: 14 TSVIVQLVGIEVCMRIIKKG-STGDISPIPFLTYFIVACLWAKYGI-IQNITQVLVVNSFASLLQFFYLVIFYTFT--VRKSQFVKLFFVSSVILFLPLIYVKYY-QEDEALATAHFGSFCVLMSIIAYAAPLASLKDVVRSRSTECMSFPLVFANFVVAIEWFVYGITIKDVNVQCSNCLGAVLCFIQLGLF 201
BLAST of EWM28332.1 vs. NCBI_GenBank
Match: gi|675182701|ref|XP_008900235.1| (hypothetical protein PPTG_07713 [Phytophthora parasitica INRA-310] >gi|568100017|gb|ETN14723.1| hypothetical protein PPTG_07713 [Phytophthora parasitica INRA-310]) HSP 1 Score: 83.9593 bits (206), Expect = 1.601e-15 Identity = 61/215 (28.37%), Postives = 105/215 (48.84%), Query Frame = 0 Query: 31 KRSRSTGDRSPLLFVAIWTNACLWMFYGVFIEAIHPIATTNFTGFLSGSYFLLTFYAYASPVAKTRFAQYFVLALSFVLSTATYCFFFPSPDTSR----TQAHLGALCTLVTIAVYAAPLSTVLRALRLRSPKPISLFFALVGTLNSVLWGAYGILTADAWVYIPSVLGVFMCLTQAAVFFWFAVGRGGLEGGKESRGEGFGGKALFDFLSLQGD 241 +++RST D S L V I+ N+ +FY I P+ T+ G + G + +FY +A+ + + F ++ S L+ Y F S T + T+ LG + T +YA+P++T++R +R ++ + +V LNS WG YG L + ++ +P+++GV + LTQ V F + R K+S + L D L + GD Sbjct: 34 RKNRSTADMSVLPCVMIFGNSYGAVFYAYAISNYLPLFATSMLGVIVGVFMTYSFYIWATD--RREVVRIFAISASVFLAVTVYGFLALSGVTGQSNHSTETTLGFIMVGFTTLMYASPMATIIRVVRTKTATSMPFTMGVVNVLNSFCWGVYGELIRNNFLLVPNIIGVTLSLTQMLVTFIY---RSKEVNDKQSVAT--SSEDLVDILVVPGD 241
BLAST of EWM28332.1 vs. NCBI_GenBank
Match: gi|301115904|ref|XP_002905681.1| (MtN3-like protein [Phytophthora infestans T30-4] >gi|262110470|gb|EEY68522.1| MtN3-like protein [Phytophthora infestans T30-4]) HSP 1 Score: 82.8037 bits (203), Expect = 1.646e-15 Identity = 65/230 (28.26%), Postives = 109/230 (47.39%), Query Frame = 0 Query: 1 MGSLGILQTSASLTAVILNICPIFDEIPAIKRSRSTGDRSPLLFVAIWTNACLWMFYGVFIEAIHPIATTNFTGFLSGSYFLLTFYAYA--SPVAKTRFAQ---YFVLALSFVLSTATYCFFFPSPDTSRTQAHLGALCTLVTIAVYAAPLSTVLRALRLRSPKPISLFFALVGTLNSVLWGAYGILTADAWVYIPSVLGVFMCLTQAAVFFWFAVGRGGLEGGKESRGE 225 + SL +L T +S V+LN+ P + E I R R+ G + L V ++ N+ LW YG I + P+ T G + + F+ +Y ++ P + A+ L +S+V+ A F + + LG LC V I +YA+PL T+ R ++ +S + + V LN +LW A+G++ D +V P+ +G Q A++F + ESR E Sbjct: 5 LESLRVLTTCSS---VLLNVSP-WPEFARINRQRTPGPLTVLPVVMLYCNSFLWTMYGFMIGQLFPLFATCSLGQCTCAGFIAIYYRWSPDRPAVRRLVAKAGSVMALCMSYVILGANE---FTNQSREQVITTLGLLCISVNICLYASPLDTMKRVVQTKSAASLPISLCSVNLLNGLLWVAFGLVDGDYFVLTPNTIGSVRSAAQVALYFTYC-------NTDESRLE 220 The following BLAST results are available for this feature:
BLAST of EWM28332.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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