EWM28341.1, cds2333 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28341.1 vs. NCBI_GenBank
Match: gi|585110694|gb|EWM28341.1| (hypothetical protein Naga_100367g4 [Nannochloropsis gaditana]) HSP 1 Score: 712.605 bits (1838), Expect = 0.000e+0 Identity = 350/350 (100.00%), Postives = 350/350 (100.00%), Query Frame = 0
Query: 1 MSCSLPQRLWKLEPWGYPARSHFAVTHLKFPVASGKYGLSLYHIALTYRLVFLLYWSFWVLYSALGGDGPPTSWWCVYVTNWTAAVMGGYAWGAFLAILIPRAFFLDRATWFLHDIATPLSIMVCLMYWLAFPVPPISGIIVHLHGVNALLMVMDLALARYPYHLKHFLPACGFMACYVVFNGVYWRAAGNVVYTPLDYTHPFLAATALVGTFFIIFPIVHLLCWRWELACFAWSERRRRNLLGGGNRKRPLLSSYARRDRESSRGEGRAEDGVEQGLESQDGGDACNGRGGTNGGGTGGKEGEAIGLTDAVLAMRDVLLLGERGVGERRWEGQGEGVDREEEGKVAGSM 350
MSCSLPQRLWKLEPWGYPARSHFAVTHLKFPVASGKYGLSLYHIALTYRLVFLLYWSFWVLYSALGGDGPPTSWWCVYVTNWTAAVMGGYAWGAFLAILIPRAFFLDRATWFLHDIATPLSIMVCLMYWLAFPVPPISGIIVHLHGVNALLMVMDLALARYPYHLKHFLPACGFMACYVVFNGVYWRAAGNVVYTPLDYTHPFLAATALVGTFFIIFPIVHLLCWRWELACFAWSERRRRNLLGGGNRKRPLLSSYARRDRESSRGEGRAEDGVEQGLESQDGGDACNGRGGTNGGGTGGKEGEAIGLTDAVLAMRDVLLLGERGVGERRWEGQGEGVDREEEGKVAGSM
Sbjct: 1 MSCSLPQRLWKLEPWGYPARSHFAVTHLKFPVASGKYGLSLYHIALTYRLVFLLYWSFWVLYSALGGDGPPTSWWCVYVTNWTAAVMGGYAWGAFLAILIPRAFFLDRATWFLHDIATPLSIMVCLMYWLAFPVPPISGIIVHLHGVNALLMVMDLALARYPYHLKHFLPACGFMACYVVFNGVYWRAAGNVVYTPLDYTHPFLAATALVGTFFIIFPIVHLLCWRWELACFAWSERRRRNLLGGGNRKRPLLSSYARRDRESSRGEGRAEDGVEQGLESQDGGDACNGRGGTNGGGTGGKEGEAIGLTDAVLAMRDVLLLGERGVGERRWEGQGEGVDREEEGKVAGSM 350
BLAST of EWM28341.1 vs. NCBI_GenBank
Match: gi|585101485|gb|EWM21306.1| (hypothetical protein Naga_100350g5 [Nannochloropsis gaditana]) HSP 1 Score: 86.2705 bits (212), Expect = 1.170e-15 Identity = 65/200 (32.50%), Postives = 98/200 (49.00%), Query Frame = 0
Query: 48 YRLVFLLYWSFWVLYSALGGDGPPT-------------SWWCVYVTNWTAAVMGGYAWGAFLAILI----PRAFFLDRATWFLHDIATPLSIMVCLMYW-LAFP-VPPISGIIVHLHGVNALLMVMDLALARYPYHLKHFLPACGFMACYVVFNGVYWRAAGN------VVYTPLDYTHPFLAATALVGTFFIIFPIVHL 222
YR + YWS W+L S LG G P W +++TNW+ ++G Y W AF A L PR L + W L + +++V L++W + FP + S VH H VN+ L+++DL L PY+ KH ++ Y++F+ VYW G +Y PLDY HP A ++ F++ P VH+
Sbjct: 41 YRCLIASYWSIWILISILGSVGVPLPDALFGSMDNDMGEKWLIFLTNWSMVLLGTYLWTAFAASLYTDHSPR---LLQTVWVLRNCTAVAALVVSLLFWCVLFPAIKKTSWTDVHCHAVNSFLVLLDLTLTHVPYYFKHGWMPFLYLVLYLLFSVVYWAEGGTDPEGDPYIYEPLDYDHPGAATGLVLAVVFLVVPFVHV 237
BLAST of EWM28341.1 vs. NCBI_GenBank
Match: gi|815810554|ref|XP_012226178.1| (PREDICTED: protein rolling stone-like isoform X2 [Linepithema humile]) HSP 1 Score: 73.1738 bits (178), Expect = 5.117e-11 Identity = 58/205 (28.29%), Postives = 98/205 (47.80%), Query Frame = 0
Query: 43 HIA---LTYRLVFLLYWSFWVLYSA--LGGDGPPTSW--WCVYVTNW------TAAVMGGY----AW-----GAFLAILIPRAFFLDRATWFLHDIATPLSIMVCLMYWLAFPVPPISGII---VHLHGVNALLMVMDLALARYPYHLKHFLPACGFMACYVVFNGVYWRAAG------NVVYTPLDYTHPFLAATALVGTFFII 216
H+A +TYR + W+ + + S G P + W +Y+TNW T A +G Y W +F A L+ R F +R WFL+ + T ++I V + YW+ P I + + +H N++LM++DL + P+ L++F + CYV+F+ +Y+ A G + +Y LD+ P + VG F +
Sbjct: 63 HVASWYVTYRWIIFYVWAGFFVCSVGEFGSYNPLKQYEKWLIYLTNWDVVLGFTQASIGLYLVLKRWYLQKVTSFDACLL-RLEFTERLYWFLYVVTTNMAIGVTVCYWVTVYDPKIHALDPLNIMMHVCNSVLMLIDLFVTSIPFRLRNFWWCLSIVMCYVIFSVIYYSAGGLDKHGNHYIYAVLDWKQPKRTSLVCVGGFTFV 266
BLAST of EWM28341.1 vs. NCBI_GenBank
Match: gi|815810556|ref|XP_012226179.1| (PREDICTED: protein rolling stone-like isoform X3 [Linepithema humile]) HSP 1 Score: 72.7886 bits (177), Expect = 6.553e-11 Identity = 58/205 (28.29%), Postives = 98/205 (47.80%), Query Frame = 0
Query: 43 HIA---LTYRLVFLLYWSFWVLYSA--LGGDGPPTSW--WCVYVTNW------TAAVMGGY----AW-----GAFLAILIPRAFFLDRATWFLHDIATPLSIMVCLMYWLAFPVPPISGII---VHLHGVNALLMVMDLALARYPYHLKHFLPACGFMACYVVFNGVYWRAAG------NVVYTPLDYTHPFLAATALVGTFFII 216
H+A +TYR + W+ + + S G P + W +Y+TNW T A +G Y W +F A L+ R F +R WFL+ + T ++I V + YW+ P I + + +H N++LM++DL + P+ L++F + CYV+F+ +Y+ A G + +Y LD+ P + VG F +
Sbjct: 58 HVASWYVTYRWIIFYVWAGFFVCSVGEFGSYNPLKQYEKWLIYLTNWDVVLGFTQASIGLYLVLKRWYLQKVTSFDACLL-RLEFTERLYWFLYVVTTNMAIGVTVCYWVTVYDPKIHALDPLNIMMHVCNSVLMLIDLFVTSIPFRLRNFWWCLSIVMCYVIFSVIYYSAGGLDKHGNHYIYAVLDWKQPKRTSLVCVGGFTFV 261
BLAST of EWM28341.1 vs. NCBI_GenBank
Match: gi|815810558|ref|XP_012226180.1| (PREDICTED: protein rolling stone-like isoform X4 [Linepithema humile] >gi|815810560|ref|XP_012226181.1| PREDICTED: protein rolling stone-like isoform X4 [Linepithema humile]) HSP 1 Score: 72.7886 bits (177), Expect = 6.793e-11 Identity = 58/205 (28.29%), Postives = 98/205 (47.80%), Query Frame = 0
Query: 43 HIA---LTYRLVFLLYWSFWVLYSA--LGGDGPPTSW--WCVYVTNW------TAAVMGGYA----W-----GAFLAILIPRAFFLDRATWFLHDIATPLSIMVCLMYWLAFPVPPISGII---VHLHGVNALLMVMDLALARYPYHLKHFLPACGFMACYVVFNGVYWRAAG------NVVYTPLDYTHPFLAATALVGTFFII 216
H+A +TYR + W+ + + S G P + W +Y+TNW T A +G Y W +F A L+ R F +R WFL+ + T ++I V + YW+ P I + + +H N++LM++DL + P+ L++F + CYV+F+ +Y+ A G + +Y LD+ P + VG F +
Sbjct: 36 HVASWYVTYRWIIFYVWAGFFVCSVGEFGSYNPLKQYEKWLIYLTNWDVVLGFTQASIGLYLVLKRWYLQKVTSFDACLL-RLEFTERLYWFLYVVTTNMAIGVTVCYWVTVYDPKIHALDPLNIMMHVCNSVLMLIDLFVTSIPFRLRNFWWCLSIVMCYVIFSVIYYSAGGLDKHGNHYIYAVLDWKQPKRTSLVCVGGFTFV 239
BLAST of EWM28341.1 vs. NCBI_GenBank
Match: gi|971518760|dbj|GAQ79406.1| (hypothetical protein KFL_000300040 [Klebsormidium nitens]) HSP 1 Score: 73.559 bits (179), Expect = 7.923e-11 Identity = 64/259 (24.71%), Postives = 94/259 (36.29%), Query Frame = 0
Query: 46 LTYRLVFLLYWSFWVLYSALGGDGPPTSWWCVYVTNWTAAVMGGYAWGAFLAILI-----------------------------------PRAFFLDRA-----------------TWFLHDIATPLSIMVCLMYWLAFPVPP----------------ISGIIVHLHGVNALLMVMDLALARYPYHLKHFLPACGFMACYVVFNGVYWRAAGN------VVYTPLDYTHPFLAATALVGT-FFIIFPIVHLLCWRWEL 229
L YR L YW W++ A G GP W VY+T+W + Y F+ L P L RA TW LH++ S+++ ++YW A P S V++HGV LM++++A++ PY L H + + CY F +YW A G +Y PLDY+ A++ +I P+ HL W W L
Sbjct: 113 LFYRFCLLFYWGGWIIADATSGSGPK---WFVYLTHWNVLLCSIYFLVVFVMTLQYTLLHWRGDQKGADSYTEEMRKADAFRARRGVEAPPSTSGLARAALRFHTHDYHFNWAYKLTWLLHNLCADASLLIVVVYWTAISSNPGGANFAGGGLGQTGSQYSPTNVNVHGVILGLMLLEIAISAIPYRLAHVVYTFIYGCCYAAFTLIYWGAGGTRPDGERFIYKPLDYSGLGAITVAVLAVMLLVIIPLAHLFIWLWHL 368
BLAST of EWM28341.1 vs. NCBI_GenBank
Match: gi|815810552|ref|XP_012226177.1| (PREDICTED: protein rolling stone-like isoform X1 [Linepithema humile]) HSP 1 Score: 72.4034 bits (176), Expect = 1.206e-10 Identity = 58/205 (28.29%), Postives = 98/205 (47.80%), Query Frame = 0
Query: 43 HIA---LTYRLVFLLYWSFWVLYSA--LGGDGPPTSW--WCVYVTNW------TAAVMGGYA----W-----GAFLAILIPRAFFLDRATWFLHDIATPLSIMVCLMYWLAFPVPPISGII---VHLHGVNALLMVMDLALARYPYHLKHFLPACGFMACYVVFNGVYWRAAG------NVVYTPLDYTHPFLAATALVGTFFII 216
H+A +TYR + W+ + + S G P + W +Y+TNW T A +G Y W +F A L+ R F +R WFL+ + T ++I V + YW+ P I + + +H N++LM++DL + P+ L++F + CYV+F+ +Y+ A G + +Y LD+ P + VG F +
Sbjct: 63 HVASWYVTYRWIIFYVWAGFFVCSVGEFGSYNPLKQYEKWLIYLTNWDVVLGFTQASIGLYLVLKRWYLQKVTSFDACLL-RLEFTERLYWFLYVVTTNMAIGVTVCYWVTVYDPKIHALDPLNIMMHVCNSVLMLIDLFVTSIPFRLRNFWWCLSIVMCYVIFSVIYYSAGGLDKHGNHYIYAVLDWKQPKRTSLVCVGGFTFV 266
BLAST of EWM28341.1 vs. NCBI_GenBank
Match: gi|1022764265|gb|KZS09735.1| (putative Rolling stone [Daphnia magna]) HSP 1 Score: 71.2478 bits (173), Expect = 1.872e-10 Identity = 49/154 (31.82%), Postives = 79/154 (51.30%), Query Frame = 0
Query: 105 FLDRATWFLHDIATPLSIMVCLMYWLAFPVPP--ISGIIVHLHGVNALLMVMDLALARYPYHLKHFLPACGFMACYVVFNGVYWRAAGNVVYTPLDYTHPFLAATALVGT-------FFIIFPIVHLLCWRW-ELACFAWSER-RRRNLLGGGN 247
FL R +WFL+++ +S+++ ++YW+A P ++ + +HG N+++ + D+ ++ P L HF + YV F+ +YW AAG V L Y +P L L T II PIVH L W +L +A R RR++ GN
Sbjct: 109 FLGRFSWFLYNVTNLISLVISVIYWIALYTPGTGLTAMNFFVHGFNSIMSIGDILVSGRPCRLMHFYQPFVVILAYVAFSAIYW-AAGGVNSDGLSYIYPVLNWDNLSLTVPFVTIGMLIILPIVHALLWSLHQLRDYAVRSRMRRKSFSQTGN 261
BLAST of EWM28341.1 vs. NCBI_GenBank
Match: gi|1176066235|ref|XP_020603342.1| (protein rolling stone-like isoform X2 [Orbicella faveolata]) HSP 1 Score: 70.4774 bits (171), Expect = 2.534e-10 Identity = 46/124 (37.10%), Postives = 68/124 (54.84%), Query Frame = 0
Query: 100 IPRAFFLDRATWFLHDIATPLSIMVCLMYWLAF--PVPPISGIIVHLHGVNALLMVMDLALARYPYHLKHFLPACGFMACYVVFNGVYWRAAG-NVVYTPLDYT-HPFLAATALVGTFFIIFPI 219
+P A+F A W +++IA+ +IMV L +WL + + V LHGVN+++MV D L+ P L H + + YV+F +YW A G N +Y DYT P LAA + + FFI P+
Sbjct: 105 LPMAWF-HEALWVIYNIASVAAIMVTLSFWLLLFNADKGVRAVTVILHGVNSIVMVGDTMLSSIPVRLFHVIYPMLYCIVYVMFTVIYWAAGGHNYIYPQTDYTGRPILAAVSQLCLFFIGLPL 227
BLAST of EWM28341.1 vs. NCBI_GenBank
Match: gi|751225663|ref|XP_011166226.1| (PREDICTED: protein rolling stone-like isoform X4 [Solenopsis invicta]) HSP 1 Score: 71.2478 bits (173), Expect = 2.899e-10 Identity = 56/209 (26.79%), Postives = 97/209 (46.41%), Query Frame = 0
Query: 46 LTYRLVFLLYWSFWVLYSAL--GGDGPPTSW--WCVYVTNWTAAVMGGYAWGAFLAILIPRAF----------------FLDRATWFLHDIATPLSIMVCLMYWLAFPVPPISGII---VHLHGVNALLMVMDLALARYPYHLKHFLPACGFMACYVVFNGVYWRAAG------NVVYTPLDYTHPFLAATALVG--TFFIIFPIVHLL 223
L YR + L W+ +V+ S G P + W +Y+TNW A+ G+ IL+ + + F +R WFL+ +AT +I V + YW P I + + +H N +LM++DL + P+ L+HF + ++ YV+F+ +Y+ A G + +Y LD+ P + +G TF I+ V+ +
Sbjct: 67 LYYRWLIFLIWTAFVICSVFEFGSYKPLMQYEKWPIYLTNWGMAL--GFTQALVGGILVSKRWRLQKIPGFDPCGLKLEFTERLYWFLYVVATNFAIGVTVCYWFVVYNPEIHQVDPLNIMMHVCNTVLMLIDLFVTSVPFRLRHFWWSLSIISFYVIFSIIYYFAGGLNKNGHHYIYKVLDWKKPMRTSLICIGGFTFVIVLHCVNCM 273 The following BLAST results are available for this feature:
BLAST of EWM28341.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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