EWM28339.1, cds2330 (CDS) Nannochloropsis gaditana

Overview
NameEWM28339.1
Unique Namecds2330
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:139599..139677 -
Alignment locationCM002459.1:138488..139456 -
Alignment locationCM002459.1:138314..138333 -

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Properties
Property NameValue
Protein idEWM28339.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100367g1.6893.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:139599..139677 -
CM002459.1supercontigCM002459.1:138488..139456 -
CM002459.1supercontigCM002459.1:138314..138333 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM28339.1 vs. NCBI_GenBank
Match: gi|585110692|gb|EWM28339.1| (hypothetical protein Naga_100367g1 [Nannochloropsis gaditana])

HSP 1 Score: 700.279 bits (1806), Expect = 0.000e+0
Identity = 355/355 (100.00%), Postives = 355/355 (100.00%), Query Frame = 0 
Query:    1 MSRRRKYRSQQISAKATVGALLVCNSANAFLWGGNCGSLYSSSRRLCISKGHLSRAPVLPLPFSIVSVKRVPRPVFFNMDKTKFCFRSLTALASIRNDDPREDETGRAPPSPQPPQVEEHQPQEREQIEPSPDILDTQGSSTPPSPPSEAETTGRSNAPPPLTPEGASPYPYPPYGYPPYPAAYYYPPPPSFYPPPPPSTDAPSSSSPSDSSTVPADAPSPPPYDLNAASYFPGGSPYYPPPPYPSPPPSAEGEDDNTQDPNLSAGTAQLQQQAAQQQEWMQSMYGAYYNQTRGGGGGEGREGEGWEEAYARAMYSYYPPPPYYFDPYYGFTGPVAWGEGEVEEEEDEWTTPSRR 355
            MSRRRKYRSQQISAKATVGALLVCNSANAFLWGGNCGSLYSSSRRLCISKGHLSRAPVLPLPFSIVSVKRVPRPVFFNMDKTKFCFRSLTALASIRNDDPREDETGRAPPSPQPPQVEEHQPQEREQIEPSPDILDTQGSSTPPSPPSEAETTGRSNAPPPLTPEGASPYPYPPYGYPPYPAAYYYPPPPSFYPPPPPSTDAPSSSSPSDSSTVPADAPSPPPYDLNAASYFPGGSPYYPPPPYPSPPPSAEGEDDNTQDPNLSAGTAQLQQQAAQQQEWMQSMYGAYYNQTRGGGGGEGREGEGWEEAYARAMYSYYPPPPYYFDPYYGFTGPVAWGEGEVEEEEDEWTTPSRR
Sbjct:    1 MSRRRKYRSQQISAKATVGALLVCNSANAFLWGGNCGSLYSSSRRLCISKGHLSRAPVLPLPFSIVSVKRVPRPVFFNMDKTKFCFRSLTALASIRNDDPREDETGRAPPSPQPPQVEEHQPQEREQIEPSPDILDTQGSSTPPSPPSEAETTGRSNAPPPLTPEGASPYPYPPYGYPPYPAAYYYPPPPSFYPPPPPSTDAPSSSSPSDSSTVPADAPSPPPYDLNAASYFPGGSPYYPPPPYPSPPPSAEGEDDNTQDPNLSAGTAQLQQQAAQQQEWMQSMYGAYYNQTRGGGGGEGREGEGWEEAYARAMYSYYPPPPYYFDPYYGFTGPVAWGEGEVEEEEDEWTTPSRR 355
The following BLAST results are available for this feature:
BLAST of EWM28339.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585110692|gb|EWM28339.1|0.000e+0100.00hypothetical protein Naga_100367g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2338rna2338Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications