EWM28359.1, cds2314 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28359.1 vs. NCBI_GenBank
Match: gi|585110719|gb|EWM28359.1| (hypothetical protein Naga_100368g7 [Nannochloropsis gaditana]) HSP 1 Score: 639.417 bits (1648), Expect = 0.000e+0 Identity = 318/318 (100.00%), Postives = 318/318 (100.00%), Query Frame = 0
Query: 1 MVGTTRQQHTPFFLLCLFFLYVARARNTRDSTIPTPPSWGPTFSVAYLATDPSPVGRLPPFPFSYKGTWHYHWPLQRQRLEYNFYEESPGSTGAVERKEKTLVELWRGHEEVYVFSPTDRSCRLLDLWPDFTPLSPHWLNGHGTGKKKGREALYRGRAYDVMRSVQNGSEVLVEVERWEGGAEGGVGTAVPGMVAYFLSPPREDPGKVVQETRGKVDVPLRVLGPVPGWGEGGEGGREGGREEAVRVFSFSDFSTQPPSENLFVLPSYCRNASVVVLPQDMGEGGGEGGREGGLGRLRVEALHTAFLGRGRGGEAAEE 318
MVGTTRQQHTPFFLLCLFFLYVARARNTRDSTIPTPPSWGPTFSVAYLATDPSPVGRLPPFPFSYKGTWHYHWPLQRQRLEYNFYEESPGSTGAVERKEKTLVELWRGHEEVYVFSPTDRSCRLLDLWPDFTPLSPHWLNGHGTGKKKGREALYRGRAYDVMRSVQNGSEVLVEVERWEGGAEGGVGTAVPGMVAYFLSPPREDPGKVVQETRGKVDVPLRVLGPVPGWGEGGEGGREGGREEAVRVFSFSDFSTQPPSENLFVLPSYCRNASVVVLPQDMGEGGGEGGREGGLGRLRVEALHTAFLGRGRGGEAAEE
Sbjct: 1 MVGTTRQQHTPFFLLCLFFLYVARARNTRDSTIPTPPSWGPTFSVAYLATDPSPVGRLPPFPFSYKGTWHYHWPLQRQRLEYNFYEESPGSTGAVERKEKTLVELWRGHEEVYVFSPTDRSCRLLDLWPDFTPLSPHWLNGHGTGKKKGREALYRGRAYDVMRSVQNGSEVLVEVERWEGGAEGGVGTAVPGMVAYFLSPPREDPGKVVQETRGKVDVPLRVLGPVPGWGEGGEGGREGGREEAVRVFSFSDFSTQPPSENLFVLPSYCRNASVVVLPQDMGEGGGEGGREGGLGRLRVEALHTAFLGRGRGGEAAEE 318
BLAST of EWM28359.1 vs. NCBI_GenBank
Match: gi|553191013|ref|XP_005855310.1| (50s ribosomal protein l24 [Nannochloropsis gaditana CCMP526] >gi|422293752|gb|EKU21052.1| 50s ribosomal protein l24 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 344.739 bits (883), Expect = 1.340e-114 Identity = 170/204 (83.33%), Postives = 176/204 (86.27%), Query Frame = 0
Query: 22 VARARNTRDSTIPTPPSWGPTFSVAYLATDPSPVGRLPPFPFSYKGTWHYHWPLQRQRLEYNFYEESPGSTGAVERKEKTLVELWRGHEEVYVFSPTDRSCRLLDLWPDFTPLSPHWLNGHGTGKKKGREALYRGRAYDVMRSVQNGSEVLVEVERWEGGAEGGVG-------TAVPGMVAYFLSPPREDPGKVVQETRGKVDV 218
+ +RNTRDSTIPTPPSWGPTFSVAYLATDPSPVGRLPPFPFSYKGTWHYHWPLQRQRLEYNFYEESPGSTGAVERKEKTLVELWRGHEEVYVFSPTDRSCRLLDLWPDFTPLSPHWLNGHGTGKKKGREALYRGRAYDVMRSVQNGSEVLVEVERWEGGAEGGV +++PG V V E R KV+V
Sbjct: 28 IKPSRNTRDSTIPTPPSWGPTFSVAYLATDPSPVGRLPPFPFSYKGTWHYHWPLQRQRLEYNFYEESPGSTGAVERKEKTLVELWRGHEEVYVFSPTDRSCRLLDLWPDFTPLSPHWLNGHGTGKKKGREALYRGRAYDVMRSVQNGSEVLVEVERWEGGAEGGVNPLPPWQQSSIPGSVGVLQ----------VMEARDKVEV 221 The following BLAST results are available for this feature:
BLAST of EWM28359.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 2
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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