EWM28362.1, cds2310 (CDS) Nannochloropsis gaditana

Overview
NameEWM28362.1
Unique Namecds2310
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:104255..104746 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM28362.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101590g1.4652.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:104255..104746 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM28362.1 vs. NCBI_GenBank
Match: gi|585110723|gb|EWM28362.1| (hypothetical protein Naga_101590g1 [Nannochloropsis gaditana])

HSP 1 Score: 319.701 bits (818), Expect = 2.805e-110
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0 
Query:    1 MPPPHLGERSTHTPRAGSKTFSCRSAFIMVAVFVAVPLSLSRAVATATWQASRHAPRYRVRATASFLSSFPRPSHPLISSMGTRDAKSRPRPTFLVPCGAQNRRPGSVARWGASVATSPAKTLPSNPLRPPSVRVHHPLSSIAQDAGCCACPRLCLRHLHVRS 163
            MPPPHLGERSTHTPRAGSKTFSCRSAFIMVAVFVAVPLSLSRAVATATWQASRHAPRYRVRATASFLSSFPRPSHPLISSMGTRDAKSRPRPTFLVPCGAQNRRPGSVARWGASVATSPAKTLPSNPLRPPSVRVHHPLSSIAQDAGCCACPRLCLRHLHVRS
Sbjct:    1 MPPPHLGERSTHTPRAGSKTFSCRSAFIMVAVFVAVPLSLSRAVATATWQASRHAPRYRVRATASFLSSFPRPSHPLISSMGTRDAKSRPRPTFLVPCGAQNRRPGSVARWGASVATSPAKTLPSNPLRPPSVRVHHPLSSIAQDAGCCACPRLCLRHLHVRS 163
The following BLAST results are available for this feature:
BLAST of EWM28362.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585110723|gb|EWM28362.1|2.805e-110100.00hypothetical protein Naga_101590g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2318rna2318Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications