EWM28375.1, cds2300 (CDS) Nannochloropsis gaditana

Overview
NameEWM28375.1
Unique Namecds2300
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:79535..79827 -
Alignment locationCM002459.1:78685..79178 -
Alignment locationCM002459.1:78364..78564 -
Alignment locationCM002459.1:77776..78140 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM28375.1
Productzinc finger mynd domain-containing protein 17
Orig transcript idgnl|cribi|Naga_100616g2.10678.mrna
GbkeyCDS
Noteencoded by transcript variant 1; alternatively spliced
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:79535..79827 -
CM002459.1supercontigCM002459.1:78685..79178 -
CM002459.1supercontigCM002459.1:78364..78564 -
CM002459.1supercontigCM002459.1:77776..78140 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
Vocabulary: INTERPRO
TermDefinition
IPR002893Znf_MYND
Homology
BLAST of EWM28375.1 vs. NCBI_GenBank
Match: gi|585110745|gb|EWM28375.1| (zinc finger mynd domain-containing protein 17 [Nannochloropsis gaditana])

HSP 1 Score: 935.25 bits (2416), Expect = 0.000e+0
Identity = 450/450 (100.00%), Postives = 450/450 (100.00%), Query Frame = 0
Query:    1 MATQVNTTQDSENSTVITDEQAWQYFSPFLTVGLVKAHELHALLKAPLRQRGERLQLLFDETIQKREAMRRICAECGRREGDKGVDKLKVCGKCANIWYCSRDCQLANFHSGEHKKACTSLKIARICRENQMKRAEMKEDWIRTYLMGLEGHTKIQWPEGQIPEGWSEFFAARQLGHQVSANSNSGMCLSELLHEGLTVAMAAKRFGLLGGRGGREGHGGDHGRHRRPFRLHILGATETQEIQRLPLSMGELGALLCPFYFEGLEVSVFGPQVMTPTAFRVSLAEGKETARDITVWKSNLLYHNWVLSHEGSKEAPPDLVVALNSGLHTGDDHHHVDGSMWLPTLTYLVASGIPFLLTMYDAEEGRKTLEMLESFDACVAWGPDLNPMRSLVLEETEAPALQRYARLVADGRMDAGADEPDGPLPPLELTLCNRTTGDSRYWVGVKGTRG 450
            MATQVNTTQDSENSTVITDEQAWQYFSPFLTVGLVKAHELHALLKAPLRQRGERLQLLFDETIQKREAMRRICAECGRREGDKGVDKLKVCGKCANIWYCSRDCQLANFHSGEHKKACTSLKIARICRENQMKRAEMKEDWIRTYLMGLEGHTKIQWPEGQIPEGWSEFFAARQLGHQVSANSNSGMCLSELLHEGLTVAMAAKRFGLLGGRGGREGHGGDHGRHRRPFRLHILGATETQEIQRLPLSMGELGALLCPFYFEGLEVSVFGPQVMTPTAFRVSLAEGKETARDITVWKSNLLYHNWVLSHEGSKEAPPDLVVALNSGLHTGDDHHHVDGSMWLPTLTYLVASGIPFLLTMYDAEEGRKTLEMLESFDACVAWGPDLNPMRSLVLEETEAPALQRYARLVADGRMDAGADEPDGPLPPLELTLCNRTTGDSRYWVGVKGTRG
Sbjct:    1 MATQVNTTQDSENSTVITDEQAWQYFSPFLTVGLVKAHELHALLKAPLRQRGERLQLLFDETIQKREAMRRICAECGRREGDKGVDKLKVCGKCANIWYCSRDCQLANFHSGEHKKACTSLKIARICRENQMKRAEMKEDWIRTYLMGLEGHTKIQWPEGQIPEGWSEFFAARQLGHQVSANSNSGMCLSELLHEGLTVAMAAKRFGLLGGRGGREGHGGDHGRHRRPFRLHILGATETQEIQRLPLSMGELGALLCPFYFEGLEVSVFGPQVMTPTAFRVSLAEGKETARDITVWKSNLLYHNWVLSHEGSKEAPPDLVVALNSGLHTGDDHHHVDGSMWLPTLTYLVASGIPFLLTMYDAEEGRKTLEMLESFDACVAWGPDLNPMRSLVLEETEAPALQRYARLVADGRMDAGADEPDGPLPPLELTLCNRTTGDSRYWVGVKGTRG 450          
BLAST of EWM28375.1 vs. NCBI_GenBank
Match: gi|585110746|gb|EWM28376.1| (zinc finger mynd domain-containing protein 17 [Nannochloropsis gaditana])

HSP 1 Score: 684.1 bits (1764), Expect = 0.000e+0
Identity = 330/332 (99.40%), Postives = 331/332 (99.70%), Query Frame = 0
Query:    1 MATQVNTTQDSENSTVITDEQAWQYFSPFLTVGLVKAHELHALLKAPLRQRGERLQLLFDETIQKREAMRRICAECGRREGDKGVDKLKVCGKCANIWYCSRDCQLANFHSGEHKKACTSLKIARICRENQMKRAEMKEDWIRTYLMGLEGHTKIQWPEGQIPEGWSEFFAARQLGHQVSANSNSGMCLSELLHEGLTVAMAAKRFGLLGGRGGREGHGGDHGRHRRPFRLHILGATETQEIQRLPLSMGELGALLCPFYFEGLEVSVFGPQVMTPTAFRVSLAEGKETARDITVWKSNLLYHNWVLSHEGSKEAPPDLVVALNSGLHTGDD 332
            MATQVNTTQDSENSTVITDEQAWQYFSPFLTVGLVKAHELHALLKAPLRQRGERLQLLFDETIQKREAMRRICAECGRREGDKGVDKLKVCGKCANIWYCSRDCQLANFHSGEHKKACTSLKIARICRENQMKRAEMKEDWIRTYLMGLEGHTKIQWPEGQIPEGWSEFFAARQLGHQVSANSNSGMCLSELLHEGLTVAMAAKRFGLLGGRGGREGHGGDHGRHRRPFRLHILGATETQEIQRLPLSMGELGALLCPFYFEGLEVSVFGPQVMTPTAFRVSLAEGKETARDITVWKSNLLYHNWVLSHEGSKEAPPDLVVALNSGLHTG +
Sbjct:    1 MATQVNTTQDSENSTVITDEQAWQYFSPFLTVGLVKAHELHALLKAPLRQRGERLQLLFDETIQKREAMRRICAECGRREGDKGVDKLKVCGKCANIWYCSRDCQLANFHSGEHKKACTSLKIARICRENQMKRAEMKEDWIRTYLMGLEGHTKIQWPEGQIPEGWSEFFAARQLGHQVSANSNSGMCLSELLHEGLTVAMAAKRFGLLGGRGGREGHGGDHGRHRRPFRLHILGATETQEIQRLPLSMGELGALLCPFYFEGLEVSVFGPQVMTPTAFRVSLAEGKETARDITVWKSNLLYHNWVLSHEGSKEAPPDLVVALNSGLHTGGE 332          
BLAST of EWM28375.1 vs. NCBI_GenBank
Match: gi|553184826|ref|XP_005854153.1| (hypothetical protein NGA_0166400 [Nannochloropsis gaditana CCMP526] >gi|422294905|gb|EKU22205.1| hypothetical protein NGA_0166400 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 560.066 bits (1442), Expect = 0.000e+0
Identity = 290/375 (77.33%), Postives = 291/375 (77.60%), Query Frame = 0
Query:  132 MKRAEMKEDWIRTYLMGLEGHTKIQWPEGQIPEGWSEFFAARQLGHQVSANSNSGMCLSELLHEGLTVAMAAKRFGLLGGRGGREGHGGDHGRHRRPFRLHILGATETQEIQRLPLSMGELGALLCPFYFE----------------------------------------GLEVSVFGPQVMTPTAFRVSLAEGKETARDITVWKSNLLYHNWVLSHEGSKEAPPDLVVALNSGLHTG--------------------------------------------DDHHHVDGSMWLPTLTYLVASGIPFLLTMYDAEEGRKTLEMLESFDACVAWGPDLNPMRSLVLEETEAPALQRYARLVADGRMDAGADEPDG 422
            MKRAEMKEDWIRTYLMGLEGHTKIQWPEGQIPEGWSEFFAARQLGHQVSANSNSGMCLSELLHEGLTVAMAAKRFGLLGGRGGREGHGGDHGRHRRPFRLHILGATETQEIQRLPLSMGELGALLCPFYFE                                        GLEVSVFGPQVMTPTAFRVSLAEGKETARDITVWKSNLLYH+WVLSHEGSKEAPPDLVVALNSGLHTG                                            DDHHHVDGSMWLPTLTYLVASGIPFLLTMYDAEEGRKTLEMLESFDACVAWGPDLNPMRSLVLEETEAPALQRYARLVADGRMDAGADEPDG
Sbjct:    1 MKRAEMKEDWIRTYLMGLEGHTKIQWPEGQIPEGWSEFFAARQLGHQVSANSNSGMCLSELLHEGLTVAMAAKRFGLLGGRGGREGHGGDHGRHRRPFRLHILGATETQEIQRLPLSMGELGALLCPFYFEGKPPPLPSGAGRINYRHASSRLTVVSPSFLPSLPPSSTPKGLEVSVFGPQVMTPTAFRVSLAEGKETARDITVWKSNLLYHDWVLSHEGSKEAPPDLVVALNSGLHTGGEIWRGGGGRKVEGKRQKKHSEWWRLSLSQPPPTAMPPVLDIISDDHHHVDGSMWLPTLTYLVASGIPFLLTMYDAEEGRKTLEMLESFDACVAWGPDLNPMRSLVLEETEAPALQRYARLVADGRMDAGADEPDG 375          
BLAST of EWM28375.1 vs. NCBI_GenBank
Match: gi|831319543|ref|XP_012692567.1| (PREDICTED: putative protein MSS51 homolog, mitochondrial isoform X1 [Clupea harengus])

HSP 1 Score: 107.071 bits (266), Expect = 6.758e-22
Identity = 105/363 (28.93%), Postives = 155/363 (42.70%), Query Frame = 0
Query:   61 ETIQKREAMRRICAECGRREGDKGVDK-LKVCGKCANIWYCSRDCQLANFHSGEHKKACTSLKIARICRENQ--MKRAEMK---EDWIRTYLMGLEGHTKIQW--PEGQIPEGWSEFFAARQLG-----------HQVSANSNSGMCLSELLHEGLTVAMAAKRFGLLGGRGGREGHGGDHGRHRRPFRLHILGATETQEIQRLPLSMGELGALLCPFYFEGLEVSVFGPQVMTPTAFRVSL-AEGKETARDITVWKSNLLYHN-WVLSHEGSKEAPPDLVVALNSGLHTG----DDHHHVDGSMWLPTLTYLVASGIPFLLTMYDAEEGRKTLEMLESFDACVAWGPDLNPMRSLVLEETEA 398
            E  +K E   R+CA C R+       K LK CGKC N++YC RDCQ    H  +HKK C +L+ A I R  +  + + ++    + W R      E ++   W   +G +        + + +             +     +     SE LH  LT+ MA K F L                + +   +H+ GA  ++ +Q     M EL  +  P + +G+EV + GP+V+   A R  L A G      I+ +K   LYH  W    E  + A PDLVV  N G+       D    VD + WLPTL  L    IP L T  D  E   TL++L   +  +     +NP RS   E+ +A
Sbjct:   23 EMFEKIEETFRVCATCDRKPAQLPDPKALKRCGKCVNVYYCCRDCQ--KQHWPQHKKLCNTLRCAAIDRRVEWLIYKGDLPFPTDAWTRP---AAEVNSWEDWLSMQGDLASRVDPILSGKYMTVLWKSVNRPRPEEADLRESVWRLCSEFLHRPLTIGMAIKFFNL--------------DPYSQSLTIHVAGAAHSETLQARVTDMDELSHMF-PGH-QGMEVVMVGPEVVEGKAMRPPLTAFGPRGKTYISGYKG--LYHQFWEHVLEKGEGAKPDLVVGFNPGVDASEENMDQEEKVDQT-WLPTLLLLRDFNIPTLFTTTDEPELEYTLQILLELEMHIK-ATVVNPFRSQKPEQVQA 360          
BLAST of EWM28375.1 vs. NCBI_GenBank
Match: gi|831319597|ref|XP_012692596.1| (PREDICTED: putative protein MSS51 homolog, mitochondrial isoform X2 [Clupea harengus])

HSP 1 Score: 101.293 bits (251), Expect = 1.124e-19
Identity = 96/357 (26.89%), Postives = 146/357 (40.90%), Query Frame = 0
Query:   61 ETIQKREAMRRICAECGRREGDKGVDK-LKVCGKCANIWYCSRDCQLANFHSGEHKKACTSLKIARICRENQ----------------MKRAEMK--EDWIRTYLMGLEGHTKIQWPEGQIPEGWSEFFAARQLGHQVSANSNSGMCLSELLHEGLTVAMAAKRFGLLGGRGGREGHGGDHGRHRRPFRLHILGATETQEIQRLPLSMGELGALLCPFYFEGLEVSVFGPQVMTPTAFRVSLAEGKETARDITVWKSNLLYHNWVLSHEGSKEAPPDLVVALNSGLHTGDDHHHVDGSMWLPTLTYLVASGIPFLLTMYDAEEGRKTLEMLESFDACVAWGPDLNPMRSLVLEETEA 398
            E  +K E   + CA C +        K LK C KC N++YC ++CQ  ++    HKK C  L++  I R  +                   AE+   EDW+ +    L            + E W    A R    +     +     SE L   LT+ MA K F L                + RP  +H++GA  ++ +Q     M EL  +  P + +G+EV + GP+V+   A R  L+    T R        L +  W    E  + A PDLVV  + G H      H  G  WLPTL  L    IP + T+++  E  ++L++L   +  +     +NP RS   E+ +A
Sbjct:   70 EMFEKMEDTFKFCAACNKLPSHLPDPKALKRCIKCLNLYYCCKECQKKDWPL--HKKFCKKLRLVAIDRLVEWLFSTGDLPFPTDAWTRPAAEVNSWEDWL-SMQGDLASRVDPILSGKNMTELWDN--AGRSRPEEADLRESVWRVCSEFLSRPLTIGMAIKLFKL--------------DPYSRPLTIHVVGAAHSETLQARVTDMDELSHMF-PGH-QGMEVVMVGPEVVEGKAMRPPLSGFGPTGRTYISGYKGLYHQFWEDVVEKEEAAKPDLVVGFHPGFHAS----HGLGEGWLPTLLLLRDFNIPSMFTVFNEAEYEESLQILLELEMDLK-ATGVNPFRSQKPEQVQA 400          
BLAST of EWM28375.1 vs. NCBI_GenBank
Match: gi|831319595|ref|XP_012692595.1| (PREDICTED: putative protein MSS51 homolog, mitochondrial isoform X1 [Clupea harengus])

HSP 1 Score: 101.293 bits (251), Expect = 1.564e-19
Identity = 96/357 (26.89%), Postives = 146/357 (40.90%), Query Frame = 0
Query:   61 ETIQKREAMRRICAECGRREGDKGVDK-LKVCGKCANIWYCSRDCQLANFHSGEHKKACTSLKIARICRENQ----------------MKRAEMK--EDWIRTYLMGLEGHTKIQWPEGQIPEGWSEFFAARQLGHQVSANSNSGMCLSELLHEGLTVAMAAKRFGLLGGRGGREGHGGDHGRHRRPFRLHILGATETQEIQRLPLSMGELGALLCPFYFEGLEVSVFGPQVMTPTAFRVSLAEGKETARDITVWKSNLLYHNWVLSHEGSKEAPPDLVVALNSGLHTGDDHHHVDGSMWLPTLTYLVASGIPFLLTMYDAEEGRKTLEMLESFDACVAWGPDLNPMRSLVLEETEA 398
            E  +K E   + CA C +        K LK C KC N++YC ++CQ  ++    HKK C  L++  I R  +                   AE+   EDW+ +    L            + E W    A R    +     +     SE L   LT+ MA K F L                + RP  +H++GA  ++ +Q     M EL  +  P + +G+EV + GP+V+   A R  L+    T R        L +  W    E  + A PDLVV  + G H      H  G  WLPTL  L    IP + T+++  E  ++L++L   +  +     +NP RS   E+ +A
Sbjct:   89 EMFEKMEDTFKFCAACNKLPSHLPDPKALKRCIKCLNLYYCCKECQKKDWPL--HKKFCKKLRLVAIDRLVEWLFSTGDLPFPTDAWTRPAAEVNSWEDWL-SMQGDLASRVDPILSGKNMTELWDN--AGRSRPEEADLRESVWRVCSEFLSRPLTIGMAIKLFKL--------------DPYSRPLTIHVVGAAHSETLQARVTDMDELSHMF-PGH-QGMEVVMVGPEVVEGKAMRPPLSGFGPTGRTYISGYKGLYHQFWEDVVEKEEAAKPDLVVGFHPGFHAS----HGLGEGWLPTLLLLRDFNIPSMFTVFNEAEYEESLQILLELEMDLK-ATGVNPFRSQKPEQVQA 419          
BLAST of EWM28375.1 vs. NCBI_GenBank
Match: gi|597801005|ref|XP_007241874.1| (PREDICTED: LOW QUALITY PROTEIN: putative protein MSS51 homolog, mitochondrial, partial [Astyanax mexicanus])

HSP 1 Score: 99.7525 bits (247), Expect = 1.834e-19
Identity = 95/358 (26.54%), Postives = 144/358 (40.22%), Query Frame = 0
Query:   61 ETIQKREAMRRICAECGRREGDKGVDKLKVCGKCANIWYCSRDCQLANFHSGEHKKACTSLKIARICR------------------ENQMKRAEMKEDWIRTYLMGLEGHTKIQWPEGQIPEGWSEFFAARQLGHQVSANSNSGMCLSELLHEGLTVAMAAKRFGLLGGRGGREGHGGDHGRHRRPFRLHILGATETQEIQRLPLSMGELGALLCPFYFEGLEVSVFGPQVMTPTAFRVSL-AEGKETARDITVWKSNLLYHN-WVLSHEGSKEAPPDLVVALNSGLHTGDDHHHVDGSMWLPTLTYLVASGIPFLLTMYDAEEGRKTLEMLESFDACVAWGPDLNPMRSLVLEETEA 398
            E   K E   + CA+CG++  D   D LK C +C N++YCS+DCQ  ++    HKK C  L+ A I R                      K     EDW+ +    L    +       + + W+   A R    +     +     SE     LT+ MA + + L                + RP  +H++GA   + +      + EL  +  P + +GLEV + GP+V+     R  L A G      I+ +K   LYH  W    E  + A PDLV+    G H G +        WLPTL  L    IP   TM    E + +L++L   +  +  G   NP  S   E+ ++
Sbjct:   15 EMFMKMEESFKFCAKCGKKPSDTA-DTLKRCARCLNVYYCSKDCQKEDW--SLHKKFCPQLRKAAIDRLVEWLLYQGDLPFPTEAWSRPTKEVRSFEDWL-SMQGDLTPRLQPILSSQNMTDLWTN--ACRPRPEEAELRESVWRVCSEFFSRPLTIGMAMQMYSL--------------NPYSRPLTIHVVGAGNAKTLGARTTDLDELSRMF-PGH-QGLEVVMVGPEVVKSPIMRPPLRAFGPRGRVYISAYKG--LYHQFWEEVVEKGEAARPDLVI----GFHPGFESSQSMSDGWLPTLLLLRDYSIPTFFTMSSESELQYSLQILLELEMDIK-GTGPNPFSSQKAEQVQS 343          
BLAST of EWM28375.1 vs. NCBI_GenBank
Match: gi|1211274010|ref|XP_021420880.1| (putative protein MSS51 homolog, mitochondrial isoform X1 [Oncorhynchus mykiss])

HSP 1 Score: 98.2117 bits (243), Expect = 7.519e-19
Identity = 97/368 (26.36%), Postives = 159/368 (43.21%), Query Frame = 0
Query:   61 ETIQKREAMRRICAECGRREGDKG-VDKLKVCGKCANIWYCSRDCQLANFHSGEHKKACTSLKIARICRENQMKRAEMKEDWIRTYLMGLEGHTKIQW--PEGQIPEGWSEFFAAR-----QLGHQVSANSNSGM--------------------CLSELLHEGLTVAMAAKRFGLLGGRGGREGHGGDHGRHRRPFRLHILGATETQEIQRLPLSMGELGALLCPFYFEGLEVSVFGPQVMTPTAFRVSLAE-GKETARDITVWKSNLLYHNWVLSH-EGSKEAPPDLVVALNSGLHTGDDHHHVDGSMWLPTLTYLVASGIPFLLTMYDAEEGRKTLEMLESFDACVAWGPDLNPMRSLVLEETEA 398
            E  QK E   + CA C ++ G       LK C +C N++YCS++CQ A++   +HKK C+ L++  I R  +         W+     G    +  +W  P+G++ +GW ++ A +     +L   +S  + + +                      SE L   +T+A+  + FGL                + +P  +H++G ++ + +        EL  +  P + +GLEV + GP+V+     R  L   G +T   I+ +K   LYH +     E  K A PDLVV    G H G D        WLPTL  L    IP L T  +  E   +L++L   +  +  G  +NP  S   E+ +A
Sbjct:   24 EMFQKMEESFKFCASCRKQPGQVADAQTLKRCVRCLNVYYCSKECQKADWP--QHKKVCSELRLVAIDRLVE---------WL--VFKGDLPFSTGKWTRPQGEV-KGWDDWLAMQGDLTPRLDAILSGTNMTDLWTNASRPKPEDDDLRKSIWRVSSEFLSRPMTIALGFRLFGL--------------NPYSKPLTIHLIGVSDNETLGARLTDYDELDRMF-PGH-KGLEVVMVGPEVVDGPIMRPPLTNSGPKTKTYISAYKG--LYHQFFEELVETEKAAKPDLVV----GFHPGFDASQGLDQGWLPTLLLLRDYEIPSLFTALEKTEMTYSLQILSELEMDLK-GSGVNPFASQKPEQVQA 354          
BLAST of EWM28375.1 vs. NCBI_GenBank
Match: gi|642129473|emb|CDQ58743.1| (unnamed protein product [Oncorhynchus mykiss])

HSP 1 Score: 98.2117 bits (243), Expect = 7.528e-19
Identity = 97/368 (26.36%), Postives = 159/368 (43.21%), Query Frame = 0
Query:   61 ETIQKREAMRRICAECGRREGDKG-VDKLKVCGKCANIWYCSRDCQLANFHSGEHKKACTSLKIARICRENQMKRAEMKEDWIRTYLMGLEGHTKIQW--PEGQIPEGWSEFFAAR-----QLGHQVSANSNSGM--------------------CLSELLHEGLTVAMAAKRFGLLGGRGGREGHGGDHGRHRRPFRLHILGATETQEIQRLPLSMGELGALLCPFYFEGLEVSVFGPQVMTPTAFRVSLAE-GKETARDITVWKSNLLYHNWVLSH-EGSKEAPPDLVVALNSGLHTGDDHHHVDGSMWLPTLTYLVASGIPFLLTMYDAEEGRKTLEMLESFDACVAWGPDLNPMRSLVLEETEA 398
            E  QK E   + CA C ++ G       LK C +C N++YCS++CQ A++   +HKK C+ L++  I R  +         W+     G    +  +W  P+G++ +GW ++ A +     +L   +S  + + +                      SE L   +T+A+  + FGL                + +P  +H++G ++ + +        EL  +  P + +GLEV + GP+V+     R  L   G +T   I+ +K   LYH +     E  K A PDLVV    G H G D        WLPTL  L    IP L T  +  E   +L++L   +  +  G  +NP  S   E+ +A
Sbjct:   25 EMFQKMEESFKFCASCRKQPGQVADAQTLKRCVRCLNVYYCSKECQKADWP--QHKKVCSELRLVAIDRLVE---------WL--VFKGDLPFSTGKWTRPQGEV-KGWDDWLAMQGDLTPRLDAILSGTNMTDLWTNASRPKPEDDDLRKSIWRVSSEFLSRPMTIALGFRLFGL--------------NPYSKPLTIHLIGVSDNETLGARLTDYDELDRMF-PGH-KGLEVVMVGPEVVDGPIMRPPLTNSGPKTKTYISAYKG--LYHQFFEELVETEKAAKPDLVV----GFHPGFDASQGLDQGWLPTLLLLRDYEIPSLFTALEKTEMTYSLQILSELEMDLK-GSGVNPFASQKPEQVQA 355          
BLAST of EWM28375.1 vs. NCBI_GenBank
Match: gi|742177024|ref|XP_010887104.1| (PREDICTED: putative protein MSS51 homolog, mitochondrial [Esox lucius])

HSP 1 Score: 97.4413 bits (241), Expect = 1.620e-18
Identity = 100/368 (27.17%), Postives = 157/368 (42.66%), Query Frame = 0
Query:   61 ETIQKREAMRRICAECGRREGD-KGVDKLKVCGKCANIWYCSRDCQLANFHSGEHKKACTSLKIARICRENQMKRAEMKEDWIRTYLMGLEGHTKIQW--PEGQIPEGWSEFFAAR-----QLGHQVSAN------SNSGM--------------CLSELLHEGLTVAMAAKRFGLLGGRGGREGHGGDHGRHRRPFRLHILGATETQEIQRLPLSMGELGALLCPFYFEGLEVSVFGPQVMTPTAFRVSLAE-GKETARDITVWKSNLLYHNWVLSH-EGSKEAPPDLVVALNSGLHTGDDHHHVDGSMWLPTLTYLVASGIPFLLTMYDAEEGRKTLEMLESFDACVAWGPDLNPMRSLVLEETEA 398
            +  QK E   + CA CG+R G       LK C  C N++YCS++CQ +++   +HKK C  L++  I R  +         W+     G       +W  P+G++ + W ++ A +     +L   +S        +N+G                 SE L   LT+AM  + FGL                + +P  +H++G ++T+ +        EL  +  P + +G+EV + GP+V+     R  L   G +T   I+ +K   LYH +     E    A PDLVV    G H G D        WLPTL  L    IP L T  D  E   +L++L   +  +  G  +NP  S   E+ +A
Sbjct:   24 DMFQKMEESFKFCASCGKRPGQVSDTQTLKRCISCLNVYYCSKECQKSDW--PQHKKVCPVLRLVAIDRLVE---------WL--VFKGDLPFPTDKWTRPQGEV-KCWDDWLAMQGDLTPKLDAILSCTNMKDLWTNAGRPKPDDDDLRKSIWRVSSEFLCRPLTIAMGFRLFGL--------------NPYSKPLTIHLIGISDTETLGARLTDFDELDRMY-PGH-QGIEVVMVGPEVVDGPIMRSPLTSFGPKTKTFISAYKG--LYHQFYEELVETKAAAKPDLVV----GFHPGFDASQGLDEGWLPTLLLLRDYDIPSLFTAADETEMTYSLQILSELEMDLK-GSGVNPFASQKPEQVQA 354          
The following BLAST results are available for this feature:
BLAST of EWM28375.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585110745|gb|EWM28375.1|0.000e+0100.00zinc finger mynd domain-containing protein 17 [Nan... [more]
gi|585110746|gb|EWM28376.1|0.000e+099.40zinc finger mynd domain-containing protein 17 [Nan... [more]
gi|553184826|ref|XP_005854153.1|0.000e+077.33hypothetical protein NGA_0166400 [Nannochloropsis ... [more]
gi|831319543|ref|XP_012692567.1|6.758e-2228.93PREDICTED: putative protein MSS51 homolog, mitocho... [more]
gi|831319597|ref|XP_012692596.1|1.124e-1926.89PREDICTED: putative protein MSS51 homolog, mitocho... [more]
gi|831319595|ref|XP_012692595.1|1.564e-1926.89PREDICTED: putative protein MSS51 homolog, mitocho... [more]
gi|597801005|ref|XP_007241874.1|1.834e-1926.54PREDICTED: LOW QUALITY PROTEIN: putative protein M... [more]
gi|1211274010|ref|XP_021420880.1|7.519e-1926.36putative protein MSS51 homolog, mitochondrial isof... [more]
gi|642129473|emb|CDQ58743.1|7.528e-1926.36unnamed protein product [Oncorhynchus mykiss][more]
gi|742177024|ref|XP_010887104.1|1.620e-1827.17PREDICTED: putative protein MSS51 homolog, mitocho... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2308rna2308Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications