EWM30453.1, cds230 (CDS) Nannochloropsis gaditana

Overview
NameEWM30453.1
Unique Namecds230
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:583024..583125 +
Alignment locationCM002455.1:583186..583608 +

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Properties
Property NameValue
Protein idEWM30453.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100100g10.8921.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:583024..583125 +
CM002455.1supercontigCM002455.1:583186..583608 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
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BLAST of EWM30453.1 vs. NCBI_GenBank
Match: gi|585113116|gb|EWM30453.1| (hypothetical protein Naga_100100g10 [Nannochloropsis gaditana])

HSP 1 Score: 354.755 bits (909), Expect = 7.502e-124
Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 0 
Query:    1 MKAASTPLSFNLPLFTSPSPFCDSSNDNAIFVCQHRKDEKGMSRATEMRSPRQFFPAVGICSTLFSIFRISEGQYPRSVTFYVSCPSACGFCAIKVVCVTNRQRQIDRQEDSEGGRKQWQRRSCVGSAVCLMSVSFSLPTICITCCCVIVLYSVTVFVLHRQRWCRKRGASSSI 174
            MKAASTPLSFNLPLFTSPSPFCDSSNDNAIFVCQHRKDEKGMSRATEMRSPRQFFPAVGICSTLFSIFRISEGQYPRSVTFYVSCPSACGFCAIKVVCVTNRQRQIDRQEDSEGGRKQWQRRSCVGSAVCLMSVSFSLPTICITCCCVIVLYSVTVFVLHRQRWCRKRGASSSI
Sbjct:    1 MKAASTPLSFNLPLFTSPSPFCDSSNDNAIFVCQHRKDEKGMSRATEMRSPRQFFPAVGICSTLFSIFRISEGQYPRSVTFYVSCPSACGFCAIKVVCVTNRQRQIDRQEDSEGGRKQWQRRSCVGSAVCLMSVSFSLPTICITCCCVIVLYSVTVFVLHRQRWCRKRGASSSI 174
The following BLAST results are available for this feature:
BLAST of EWM30453.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585113116|gb|EWM30453.1|7.502e-124100.00hypothetical protein Naga_100100g10 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna230rna230Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications