EWM28377.1, cds2296 (CDS) Nannochloropsis gaditana

Overview
NameEWM28377.1
Unique Namecds2296
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:73308..73394 -
Alignment locationCM002459.1:73012..73191 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM28377.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_102854g1.10508.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:73308..73394 -
CM002459.1supercontigCM002459.1:73012..73191 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM28377.1 vs. NCBI_GenBank
Match: gi|585110748|gb|EWM28377.1| (hypothetical protein Naga_102854g1 [Nannochloropsis gaditana])

HSP 1 Score: 175.637 bits (444), Expect = 9.889e-56
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0 
Query:    1 MRHLPSHVRERLESQHPQFAPYMLPEEKAARREAEKKNRQLFDENPGVLDIPLREGEALHAATQVGNPSLSIRPSSSLSLFLPFLPPL 88
            MRHLPSHVRERLESQHPQFAPYMLPEEKAARREAEKKNRQLFDENPGVLDIPLREGEALHAATQVGNPSLSIRPSSSLSLFLPFLPPL
Sbjct:    1 MRHLPSHVRERLESQHPQFAPYMLPEEKAARREAEKKNRQLFDENPGVLDIPLREGEALHAATQVGNPSLSIRPSSSLSLFLPFLPPL 88
The following BLAST results are available for this feature:
BLAST of EWM28377.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585110748|gb|EWM28377.1|9.889e-56100.00hypothetical protein Naga_102854g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2304rna2304Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications