EWM28381.1, cds2292 (CDS) Nannochloropsis gaditana

Overview
NameEWM28381.1
Unique Namecds2292
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:67504..67560 -
Alignment locationCM002459.1:67111..67197 -
Alignment locationCM002459.1:66827..66919 -

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Properties
Property NameValue
Protein idEWM28381.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101161g3.6794.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:67504..67560 -
CM002459.1supercontigCM002459.1:67111..67197 -
CM002459.1supercontigCM002459.1:66827..66919 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
BLAST of EWM28381.1 vs. NCBI_GenBank
Match: gi|585110756|gb|EWM28381.1| (hypothetical protein Naga_101161g3 [Nannochloropsis gaditana])

HSP 1 Score: 149.443 bits (376), Expect = 1.192e-45
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0
Query:    1 MPRSPTNLLPRGVNSYSLEAINTAKSNSSPSPATSTENISSPTSPAASPAPFAPKSGPVGTCFLHSDPFLPHSLRSSP 78
            MPRSPTNLLPRGVNSYSLEAINTAKSNSSPSPATSTENISSPTSPAASPAPFAPKSGPVGTCFLHSDPFLPHSLRSSP
Sbjct:    1 MPRSPTNLLPRGVNSYSLEAINTAKSNSSPSPATSTENISSPTSPAASPAPFAPKSGPVGTCFLHSDPFLPHSLRSSP 78          
BLAST of EWM28381.1 vs. NCBI_GenBank
Match: gi|553184823|ref|XP_005854152.1| (hypothetical protein NGA_0166300 [Nannochloropsis gaditana CCMP526] >gi|422294904|gb|EKU22204.1| hypothetical protein NGA_0166300 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 90.5077 bits (223), Expect = 1.341e-20
Identity = 48/48 (100.00%), Postives = 48/48 (100.00%), Query Frame = 0
Query:    1 MPRSPTNLLPRGVNSYSLEAINTAKSNSSPSPATSTENISSPTSPAAS 48
            MPRSPTNLLPRGVNSYSLEAINTAKSNSSPSPATSTENISSPTSPAAS
Sbjct:    1 MPRSPTNLLPRGVNSYSLEAINTAKSNSSPSPATSTENISSPTSPAAS 48          
The following BLAST results are available for this feature:
BLAST of EWM28381.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585110756|gb|EWM28381.1|1.192e-45100.00hypothetical protein Naga_101161g3 [Nannochloropsi... [more]
gi|553184823|ref|XP_005854152.1|1.341e-20100.00hypothetical protein NGA_0166300 [Nannochloropsis ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2300rna2300Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications