EWM28388.1, cds2290 (CDS) Nannochloropsis gaditana

Overview
NameEWM28388.1
Unique Namecds2290
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:65191..65235 -
Alignment locationCM002459.1:64411..64566 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM28388.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100264g1.10407.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:65191..65235 -
CM002459.1supercontigCM002459.1:64411..64566 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM28388.1 vs. NCBI_GenBank
Match: gi|585110766|gb|EWM28388.1| (hypothetical protein Naga_100264g1 [Nannochloropsis gaditana])

HSP 1 Score: 132.109 bits (331), Expect = 3.664e-39
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 0 
Query:    1 MGVGKFSKIDVQKSVKPRVVCAAGGKITREGRTERGSRRVWIRAQNSKRTVCIKDKIHRLGKMSDS 66
            MGVGKFSKIDVQKSVKPRVVCAAGGKITREGRTERGSRRVWIRAQNSKRTVCIKDKIHRLGKMSDS
Sbjct:    1 MGVGKFSKIDVQKSVKPRVVCAAGGKITREGRTERGSRRVWIRAQNSKRTVCIKDKIHRLGKMSDS 66
The following BLAST results are available for this feature:
BLAST of EWM28388.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585110766|gb|EWM28388.1|3.664e-39100.00hypothetical protein Naga_100264g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2298rna2298Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications