EWM28389.1, cds2284 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM28389.1 vs. NCBI_GenBank
Match: gi|585110767|gb|EWM28389.1| (hypothetical protein Naga_100264g7 [Nannochloropsis gaditana]) HSP 1 Score: 203.371 bits (516), Expect = 2.083e-66 Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0
Query: 1 MGGRDNGNPIPTHGIFNYTAVGGTVPFTANDLGPAAPQWRARSDLSGYRYSPIACHVCSYLCFTAPVVGDEEDRCQFTLDWNTTAKMQDRCPHWM 95
MGGRDNGNPIPTHGIFNYTAVGGTVPFTANDLGPAAPQWRARSDLSGYRYSPIACHVCSYLCFTAPVVGDEEDRCQFTLDWNTTAKMQDRCPHWM
Sbjct: 1 MGGRDNGNPIPTHGIFNYTAVGGTVPFTANDLGPAAPQWRARSDLSGYRYSPIACHVCSYLCFTAPVVGDEEDRCQFTLDWNTTAKMQDRCPHWM 95
BLAST of EWM28389.1 vs. NCBI_GenBank
Match: gi|553180964|ref|XP_005853490.1| (hypothetical protein NGA_0469400 [Nannochloropsis gaditana CCMP526] >gi|422295572|gb|EKU22871.1| hypothetical protein NGA_0469400 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 167.933 bits (424), Expect = 6.995e-52 Identity = 78/81 (96.30%), Postives = 79/81 (97.53%), Query Frame = 0
Query: 15 IFNYTAVGGTVPFTANDLGPAAPQWRARSDLSGYRYSPIACHVCSYLCFTAPVVGDEEDRCQFTLDWNTTAKMQDRCPHWM 95
I+ TAVGGTVPFTANDLGPAAPQWRARSDLSGYRYSPIACHVCSYLCFTAPVVGDEEDRCQFTLDWNTTAKMQDRCPHWM
Sbjct: 54 IYLPTAVGGTVPFTANDLGPAAPQWRARSDLSGYRYSPIACHVCSYLCFTAPVVGDEEDRCQFTLDWNTTAKMQDRCPHWM 134
BLAST of EWM28389.1 vs. NCBI_GenBank
Match: gi|585109275|gb|EWM27098.1| (lipase family protein [Nannochloropsis gaditana]) HSP 1 Score: 88.5817 bits (218), Expect = 1.658e-18 Identity = 42/80 (52.50%), Postives = 55/80 (68.75%), Query Frame = 0
Query: 16 FNYTAVGGTVPFTANDLGPAAPQ----WRARSDLSGYRYSPIACHVCSYLCFTAPVVGDEEDRCQFTLDWNTTAKMQDRC 91
++YTA+GG+VPFT PA Q W RSD++G+RYSP+A H CSY+CFTAP VGD D+C FTL+ ++ M RC
Sbjct: 429 YSYTALGGSVPFT-----PAQMQNGRTWALRSDVAGFRYSPVAAHTCSYMCFTAPSVGDAYDQCVFTLELGSSVDMDKRC 503 The following BLAST results are available for this feature:
BLAST of EWM28389.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 3
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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