EWM28401.1, cds2274 (CDS) Nannochloropsis gaditana

Overview
NameEWM28401.1
Unique Namecds2274
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:10920..11052 -
Alignment locationCM002459.1:9276..10612 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM28401.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100206g4.1433.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:10920..11052 -
CM002459.1supercontigCM002459.1:9276..10612 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM28401.1 vs. NCBI_GenBank
Match: gi|585110785|gb|EWM28401.1| (hypothetical protein Naga_100206g4 [Nannochloropsis gaditana])

HSP 1 Score: 990.719 bits (2560), Expect = 0.000e+0
Identity = 489/489 (100.00%), Postives = 489/489 (100.00%), Query Frame = 0 
Query:    1 MPPLHRINAACVAVMAAMVSRITSSYALATDIQDPLLPSNFTQTSCSRSSKAANIMDCTYEGHLIHVTTVDAHTNVEALGSKIWSDLSTGEMEVEAPGFKLRCLISRGEKDFDDQPCEVDTSWRRKPDADYSVEASEVPASMASPSSPEHPSFAVSLLRGARTLEASTDLAGPQPATQPFDCRRTAAGRNCTDAGGQWAHVERNEDGGTHVTAPGVDIRTGGEGGGDVRVDAWGFHLVCRKESATNKTTCGASNDWFGKGGAGRTGDGPAPVSAARPRGPEEDVPDPVMHLAPQHRADRPAEGSGSQGRGSEGGSRGMASGSSTTITDGPFDRFQPASPAGTVGERLTTTLGQKASEPGTVASNILSKEIESASAPATILVGVVEDPPPHRPSLAPKSPLHGSTAPSTPDPRDPLWVSNPKNCTRAFKGEGEDCWDDEHWVNGRTGTSGRREGPGGESGVEVTSAGRADLPVSAGVEKEDSDATDAGRR 489
            MPPLHRINAACVAVMAAMVSRITSSYALATDIQDPLLPSNFTQTSCSRSSKAANIMDCTYEGHLIHVTTVDAHTNVEALGSKIWSDLSTGEMEVEAPGFKLRCLISRGEKDFDDQPCEVDTSWRRKPDADYSVEASEVPASMASPSSPEHPSFAVSLLRGARTLEASTDLAGPQPATQPFDCRRTAAGRNCTDAGGQWAHVERNEDGGTHVTAPGVDIRTGGEGGGDVRVDAWGFHLVCRKESATNKTTCGASNDWFGKGGAGRTGDGPAPVSAARPRGPEEDVPDPVMHLAPQHRADRPAEGSGSQGRGSEGGSRGMASGSSTTITDGPFDRFQPASPAGTVGERLTTTLGQKASEPGTVASNILSKEIESASAPATILVGVVEDPPPHRPSLAPKSPLHGSTAPSTPDPRDPLWVSNPKNCTRAFKGEGEDCWDDEHWVNGRTGTSGRREGPGGESGVEVTSAGRADLPVSAGVEKEDSDATDAGRR
Sbjct:    1 MPPLHRINAACVAVMAAMVSRITSSYALATDIQDPLLPSNFTQTSCSRSSKAANIMDCTYEGHLIHVTTVDAHTNVEALGSKIWSDLSTGEMEVEAPGFKLRCLISRGEKDFDDQPCEVDTSWRRKPDADYSVEASEVPASMASPSSPEHPSFAVSLLRGARTLEASTDLAGPQPATQPFDCRRTAAGRNCTDAGGQWAHVERNEDGGTHVTAPGVDIRTGGEGGGDVRVDAWGFHLVCRKESATNKTTCGASNDWFGKGGAGRTGDGPAPVSAARPRGPEEDVPDPVMHLAPQHRADRPAEGSGSQGRGSEGGSRGMASGSSTTITDGPFDRFQPASPAGTVGERLTTTLGQKASEPGTVASNILSKEIESASAPATILVGVVEDPPPHRPSLAPKSPLHGSTAPSTPDPRDPLWVSNPKNCTRAFKGEGEDCWDDEHWVNGRTGTSGRREGPGGESGVEVTSAGRADLPVSAGVEKEDSDATDAGRR 489
The following BLAST results are available for this feature:
BLAST of EWM28401.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585110785|gb|EWM28401.1|0.000e+0100.00hypothetical protein Naga_100206g4 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2282rna2282Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications