EWM28411.1, cds2264 (CDS) Nannochloropsis gaditana

Overview
NameEWM28411.1
Unique Namecds2264
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:1351316..1351331 +
Alignment locationCM002458.1:1351623..1352305 +

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Properties
Property NameValue
Protein idEWM28411.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100088g7.1230.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:1351316..1351331 +
CM002458.1supercontigCM002458.1:1351623..1352305 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM28411.1 vs. NCBI_GenBank
Match: gi|585110796|gb|EWM28411.1| (hypothetical protein Naga_100088g7 [Nannochloropsis gaditana])

HSP 1 Score: 478.019 bits (1229), Expect = 1.179e-170
Identity = 232/232 (100.00%), Postives = 232/232 (100.00%), Query Frame = 0 
Query:    1 MVGRQALPWECGHRLCPRGGGEGAAEATGSQEARADESIITHDILINGDKTRKDGSSTGSCGSIGAVTQGNGGKGKRARTLSKAKRKRKEPGANKGIVLRVLLDPHLSLLPAGAVPFLSHLQIRGSQHTRDASELPQVVSSPPSRSTEMDYATNRVLDIHGFSIPEHTHTVEASLEQEQRQCTRRKLTNEDGDKKVLSMSFQTDPNQDKRIDVVSAQNDRALNKTVNIIFAV 232
            MVGRQALPWECGHRLCPRGGGEGAAEATGSQEARADESIITHDILINGDKTRKDGSSTGSCGSIGAVTQGNGGKGKRARTLSKAKRKRKEPGANKGIVLRVLLDPHLSLLPAGAVPFLSHLQIRGSQHTRDASELPQVVSSPPSRSTEMDYATNRVLDIHGFSIPEHTHTVEASLEQEQRQCTRRKLTNEDGDKKVLSMSFQTDPNQDKRIDVVSAQNDRALNKTVNIIFAV
Sbjct:    1 MVGRQALPWECGHRLCPRGGGEGAAEATGSQEARADESIITHDILINGDKTRKDGSSTGSCGSIGAVTQGNGGKGKRARTLSKAKRKRKEPGANKGIVLRVLLDPHLSLLPAGAVPFLSHLQIRGSQHTRDASELPQVVSSPPSRSTEMDYATNRVLDIHGFSIPEHTHTVEASLEQEQRQCTRRKLTNEDGDKKVLSMSFQTDPNQDKRIDVVSAQNDRALNKTVNIIFAV 232
The following BLAST results are available for this feature:
BLAST of EWM28411.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585110796|gb|EWM28411.1|1.179e-170100.00hypothetical protein Naga_100088g7 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2272rna2272Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications