EWM28405.1, cds2263 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28405.1 vs. NCBI_GenBank
Match: gi|585110790|gb|EWM28405.1| (cen [Nannochloropsis gaditana]) HSP 1 Score: 402.905 bits (1034), Expect = 4.686e-142 Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 0
Query: 1 MNFLRPLALTLLMVPSALAAPATPAAASLESLKTAHIIPDVISNFDPTATLRVQYGKQAPLEMGEQILPSEAADPPSVTFMGTNPQKLYTLVMTDPGVLDIKTLRGPQQSAWQWLHWIVVNVPGEKAVPAAGQVLQPYGQPAPPAGNHRYTFILFEQKAEINPAVPKGRDAFDTRAFAIANGLTPIGGFYFLAGPETAQ 199
MNFLRPLALTLLMVPSALAAPATPAAASLESLKTAHIIPDVISNFDPTATLRVQYGKQAPLEMGEQILPSEAADPPSVTFMGTNPQKLYTLVMTDPGVLDIKTLRGPQQSAWQWLHWIVVNVPGEKAVPAAGQVLQPYGQPAPPAGNHRYTFILFEQKAEINPAVPKGRDAFDTRAFAIANGLTPIGGFYFLAGPETAQ
Sbjct: 1 MNFLRPLALTLLMVPSALAAPATPAAASLESLKTAHIIPDVISNFDPTATLRVQYGKQAPLEMGEQILPSEAADPPSVTFMGTNPQKLYTLVMTDPGVLDIKTLRGPQQSAWQWLHWIVVNVPGEKAVPAAGQVLQPYGQPAPPAGNHRYTFILFEQKAEINPAVPKGRDAFDTRAFAIANGLTPIGGFYFLAGPETAQ 199
BLAST of EWM28405.1 vs. NCBI_GenBank
Match: gi|1047209949|dbj|BAV32137.1| (MOTHER OF FT AND TFL1 [Symplocarpus renifolius]) HSP 1 Score: 125.176 bits (313), Expect = 2.091e-32 Identity = 82/202 (40.59%), Postives = 113/202 (55.94%), Query Frame = 0
Query: 9 LTLLMVPSALAA------PATPAAASLESLKTAHIIPDVISNFDPTATLRVQYGKQAPLEMGEQILPSEAADPPSVTFMG--TNPQKLYTLVMTDPGVLDIKTLRGPQQSAWQWLHWIVVNVPGEKAVPAAGQVLQPYGQPAPPAGNHRYTFILFEQK---AEINPAVPKGRDAFDTRAFAIANGL-TPIGGFYFLAGPETA 198
L+++++ SA A+ AT + L++L A +IPDVI F P A + +YG++ ++ G I PSE+A P+V G + LYTL+MTDP D + P + +WLHWIVV++PGE A G+ L PY P PP G HRY F++F+Q E+ P P GR F TR FA NGL P+ YF A E A
Sbjct: 16 LSVVVLVSAFASLSLLLPVATSRRSQLDALVAARVIPDVIDAFSPAAEVSARYGRRDVVD-GCDIKPSESASRPAVWIRGRGCSGDNLYTLIMTDP---DAPSPSNPSER--EWLHWIVVDIPGE-CNAAKGKELVPYMGPEPPIGIHRYVFVVFKQNKTLGEVRP--PLGRGHFKTRGFAAQNGLGLPVAALYFNATKEPA 208
BLAST of EWM28405.1 vs. NCBI_GenBank
Match: gi|1173708340|gb|ARE72523.1| (MFT1 [Actinidia chinensis var. chinensis]) HSP 1 Score: 113.235 bits (282), Expect = 3.124e-28 Identity = 74/176 (42.05%), Postives = 98/176 (55.68%), Query Frame = 0
Query: 26 AASLESLKTAHIIPDVISNFDPTATLRVQYGKQAPLEMGEQILPSEAADPPSVTFMGTNPQKLYTLVMTDPGVLDIKTLRGPQQSAWQWLHWIVVNVPGEKAVPAAGQVLQPYGQPAPPAGNHRYTFILFEQKAEINPA-VPKGRDAFDTRAFAIANGL-TPIGGFYFLAGPETAQ 199
AAS++ L +I DV+ F PT T+ V +G + + G I PS A +PP VT G +PQ+LYTLVMTDP D + P S +W HWIV ++PG + P G+ + PY P PP G HRY +LF+QK+ + P R F+TR FA GL P+ YF A E A
Sbjct: 2 AASVDPLVVGRVIGDVVDMFVPTVTMHVYFGSRH-VTNGCDIKPSVANNPPRVTISG-HPQQLYTLVMTDP---DAPSPSEP--SLREWAHWIVTDIPGGSS-PTQGKEVLPYMGPNPPVGIHRYILVLFQQKSPLEAVDQPISRAHFNTRTFAHQMGLGLPVATVYFNAHKEPAN 169
BLAST of EWM28405.1 vs. NCBI_GenBank
Match: gi|1208499575|gb|OWM62629.1| (hypothetical protein CDL15_Pgr019923 [Punica granatum]) HSP 1 Score: 112.079 bits (279), Expect = 8.788e-28 Identity = 72/176 (40.91%), Postives = 98/176 (55.68%), Query Frame = 0
Query: 26 AASLESLKTAHIIPDVISNFDPTATLRVQYGKQAPLEMGEQILPSEAADPPSVTFMGTNPQKLYTLVMTDPGVLDIKTLRGPQQSAWQWLHWIVVNVPGEKAVPAAGQVLQPYGQPAPPAGNHRYTFILFEQKAEINPA-VPKGRDAFDTRAFAIANGLT-PIGGFYFLAGPETAQ 199
A+S++ L +I DV+ F PT + V YG + + G I PS +AD P VT G P +LYTLVMTDP D + P S +W+HWIVV++PG V + G+ + PY P PP G HRY +LF+Q+A + P R F+TR FA GL+ P+ YF + E A
Sbjct: 2 ASSVDPLIVGRVIGDVVDMFVPTVNISVNYGSKH-VNNGCDIKPSMSADTPKVTISG-RPDQLYTLVMTDP---DAPSPSEP--SMREWVHWIVVDIPGGTNV-SRGREILPYMGPRPPVGIHRYILVLFQQRAPLGLVDQPTSRANFNTRHFAAHFGLSLPVATVYFNSQKEPAN 169
BLAST of EWM28405.1 vs. NCBI_GenBank
Match: gi|410442707|gb|AFV67439.1| (centroradialis [Hordeum vulgare]) HSP 1 Score: 112.079 bits (279), Expect = 9.427e-28 Identity = 66/175 (37.71%), Postives = 86/175 (49.14%), Query Frame = 0
Query: 26 AASLESLKTAHIIPDVISNFDPTATLRVQYGKQAPLEMGEQILPSEAADPPSVTFMGTNPQKLYTLVMTDPGVLDIKTLRGPQQ-SAWQWLHWIVVNVPGEKAVPAAGQVLQPYGQPAPPAGNHRYTFILFEQKAEINPAVPKGRDAFDTRAFAIANGL-TPIGGFYFLAGPETA 198
A LE L +I +VI NF+PT + V Y + G + PS P + G + + +TLVMTDP V GP W+ LHWIV ++PG +V+ Y P P G HR+TF+LF+QK P RD F+TR FA N L P+ YF A ETA
Sbjct: 2 ARVLEPLVVGKVIGEVIDNFNPTVKMTVTYSSNKQVFNGHEFFPSAVVSKPRIEVQGGDMRSFFTLVMTDPDVP------GPSDPYLWEHLHWIVSDIPGTTDASFGREVVS-YESPKPNIGIHRFTFVLFQQKKRQAMNAPSTRDYFNTRRFADENDLGLPVAAVYFNAQRETA 169
BLAST of EWM28405.1 vs. NCBI_GenBank
Match: gi|1024017238|gb|KZV36488.1| (CEN-like protein 1-like [Dorcoceras hygrometricum]) HSP 1 Score: 111.309 bits (277), Expect = 2.103e-27 Identity = 67/171 (39.18%), Postives = 93/171 (54.39%), Query Frame = 0
Query: 30 ESLKTAHIIPDVISNFDPTATLRVQYGKQAPLEMGEQILPSEAADPPSVTFMGTNPQKLYTLVMTDPGVLDIKTLRGPQQSAWQWLHWIVVNVPGEKAVPAAGQVLQPYGQPAPPAGNHRYTFILFEQKAEIN-PAVPKGRDAFDTRAFAIANGL-TPIGGFYFLAGPETA 198
ESL II +V+ FDP L V Y + G +++P+ A P V G + + YTLVMTDP D + P S + +HWIV ++PG + G+ + Y +P P G HRYTF++F+QKA + +P RD F+TR FA NGL +P+ YF A ETA
Sbjct: 6 ESLYVGRIIGEVVDCFDPCVQLNVIYNGNKHVSNGHELMPALVAAKPRVEIGGEDMRDAYTLVMTDP---DAPSPSDP--SLREHVHWIVTDIPGTTDA-SFGREVVCYEKPKPTLGIHRYTFVVFKQKARHSVKYLPASRDYFNTRRFAEENGLDSPVAALYFNAQRETA 170
BLAST of EWM28405.1 vs. NCBI_GenBank
Match: gi|922550710|ref|XP_013603337.1| (PREDICTED: protein MOTHER of FT and TF 1 isoform X1 [Brassica oleracea var. oleracea] >gi|674951679|emb|CDX81861.1| BnaC08g37400D [Brassica napus]) HSP 1 Score: 110.153 bits (274), Expect = 5.001e-27 Identity = 73/178 (41.01%), Postives = 99/178 (55.62%), Query Frame = 0
Query: 26 AASLESLKTAHIIPDVISNFDPTATLRVQYGKQAPLEMGEQILPSEAADPPSVTFMGTNPQKLYTLVMTDPGVLDIKTLRGPQQSAWQWLHWIVVNVPGEKAVPAAGQVLQPYGQPAPPAGNHRYTFILFEQKAEINPAV--PKGRDAFDTRAFA--IANGLTPIGGFYFLAGPETAQ 199
AAS++ L +I DV+ F PTA + V +G + + G +I PS A +PP V+ G N +LYTLVMTDP D + P +W+HWIVV++PG P+ G+ + PY +P PP G HRY F+LF Q + + V P R F TR FA + GL P+ YF A E A
Sbjct: 2 AASVDPLVVGRVIGDVLDMFIPTANMSVYFGPKH-ITNGCEIKPSAAVNPPKVSISG-NSNELYTLVMTDP---DAPSPSEPNMR--EWVHWIVVDIPGGTN-PSKGKEILPYMEPRPPVGIHRYIFVLFRQNSPVGMMVQQPPSRANFSTRMFAGHLDLGL-PVATVYFNAQKEPAS 170
BLAST of EWM28405.1 vs. NCBI_GenBank
Match: gi|593794939|ref|XP_007160508.1| (hypothetical protein PHAVU_002G327700g [Phaseolus vulgaris] >gi|561033923|gb|ESW32502.1| hypothetical protein PHAVU_002G327700g [Phaseolus vulgaris]) HSP 1 Score: 110.153 bits (274), Expect = 5.249e-27 Identity = 69/176 (39.20%), Postives = 94/176 (53.41%), Query Frame = 0
Query: 26 AASLESLKTAHIIPDVISNFDPTATLRVQYGKQAPLEMGEQILPSEAADPPSVTFMGTNPQKLYTLVMTDPGVLDIKTLRGPQQSAWQWLHWIVVNVPGEKAVPAAGQVLQPYGQPAPPAGNHRYTFILFEQKAEINPAV-PKGRDAFDTRAFAIANGL-TPIGGFYFLAGPETAQ 199
AAS++ L +I DV+ F P+ + V YG + + G I PS A +PP +T G + LYTL+MTDP D + P +W+HW+V ++PG P G+ + PY P PP G HRY F+LFEQKA + P P+ R F TR FA L P+ YF + E A
Sbjct: 2 AASVDPLVVGRVIGDVVDMFVPSVNMSVYYGSKH-VTSGCDIKPSIAVNPPKLTLTGKK-ENLYTLIMTDP---DAPSPSEPNMR--EWIHWVVADIPGCTN-PFRGKEIIPYTGPKPPVGIHRYIFVLFEQKAPMGPVEQPESRGNFSTRTFAKDMDLGLPVATVYFNSQKEPAS 169
BLAST of EWM28405.1 vs. NCBI_GenBank
Match: gi|1004339247|gb|AMP40725.1| (mother of FT and TFL1-like protein [Hevea brasiliensis] >gi|1004339252|gb|AMP40726.1| mother of FT and TFL1-like protein [Hevea brasiliensis]) HSP 1 Score: 109.768 bits (273), Expect = 7.445e-27 Identity = 72/178 (40.45%), Postives = 93/178 (52.25%), Query Frame = 0
Query: 26 AASLESLKTAHIIPDVISNFDPTATLRVQYGKQAPLEMGEQILPSEAADPPSVTFMGTN-PQKLYTLVMTDPGVLDIKTLRGPQQSAW-QWLHWIVVNVPGEKAVPAAGQVLQPYGQPAPPAGNHRYTFILFEQKAEI--NPAVPKGRDAFDTRAFAIANGL-TPIGGFYFLAGPETA 198
A SLE L +I DV+ ++P A V+YG + + G +I PS AA+ P V MG+ LYT+VM DP P + W +WLHWIVV++P E + G L PY P PP G HRY F LF+QKA + P GR F TR FA +G P+ YF + E A
Sbjct: 2 ARSLEPLVVGKVIGDVLDMYNPVAEFTVRYGSKQ-IANGWEIKPSVAAEMPHVQIMGSRFSSDLYTMVMVDPDAPS------PSEPKWREWLHWIVVDIP-EGSDATKGHELVPYMGPQPPTGIHRYVFALFKQKAALMGRSRPPGGRGNFSTRQFAAQHGFGLPVAAVYFNSQKEPA 171
BLAST of EWM28405.1 vs. NCBI_GenBank
Match: gi|1079444115|ref|XP_009117626.2| (PREDICTED: protein MOTHER of FT and TFL1 [Brassica rapa] >gi|674911430|emb|CDY21719.1| BnaA09g44700D [Brassica napus]) HSP 1 Score: 109.768 bits (273), Expect = 7.527e-27 Identity = 73/178 (41.01%), Postives = 98/178 (55.06%), Query Frame = 0
Query: 26 AASLESLKTAHIIPDVISNFDPTATLRVQYGKQAPLEMGEQILPSEAADPPSVTFMGTNPQKLYTLVMTDPGVLDIKTLRGPQQSAWQWLHWIVVNVPGEKAVPAAGQVLQPYGQPAPPAGNHRYTFILFEQKAEINPAV--PKGRDAFDTRAFA--IANGLTPIGGFYFLAGPETAQ 199
AAS++ L +I DV+ F PTA + V +G + + G +I PS A +PP V G N +LYTLVMTDP D + P +W+HWIVV++PG P+ G+ + PY +P PP G HRY F+LF Q + + V P R F TR FA + GL P+ YF A E A
Sbjct: 2 AASVDPLVVGRVIGDVLDMFIPTANMSVYFGPKH-ITNGCEIKPSAAVNPPKVNISG-NSNELYTLVMTDP---DAPSPSEPNMR--EWVHWIVVDIPGGTN-PSKGKEILPYMEPRPPVGIHRYIFVLFRQNSPVGMMVQQPPSRANFSTRMFAGHLDLGL-PVATVYFNAQKEPAS 170 The following BLAST results are available for this feature:
BLAST of EWM28405.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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