EWM28438.1, cds2232 (CDS) Nannochloropsis gaditana

Overview
NameEWM28438.1
Unique Namecds2232
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:1237115..1238957 +
Alignment locationCM002458.1:1239226..1239524 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM28438.1
Productabc transporter family protein
Orig transcript idgnl|cribi|Naga_100495g3.2390.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:1237115..1238957 +
CM002458.1supercontigCM002458.1:1239226..1239524 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0000166nucleotide binding
GO:0016887ATPase activity
GO:0005524ATP binding
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR017871ABC_transporter_CS
IPR003439ABC_transporter-like
IPR027417P-loop_NTPase
IPR013525ABC_2_trans
IPR003593AAA+_ATPase
Homology
BLAST of EWM28438.1 vs. NCBI_GenBank
Match: gi|585110835|gb|EWM28438.1| (abc transporter family protein [Nannochloropsis gaditana])

HSP 1 Score: 1457.2 bits (3771), Expect = 0.000e+0
Identity = 713/713 (100.00%), Postives = 713/713 (100.00%), Query Frame = 0
Query:    1 MNKSDLKTPLVGSSREHVAIPVVTAHSQQGQDGKSFGNEATTNMDRIVPITLEVKQLNYYLGNGKHEKRILKDVNLHFKSGMLTELMGPSGAGKTTLLNLLIGNAGGRIEGSVEVNGRALKKVANVFKKFYTFVPQDDSLLASLSTRETLMFAARLRLPMTMPMAEKKRRVNRVLAELSLIRCADQRIGDVDRRGISGGERKRASIALELLVNPSVMFIDEPTSGLDSKMAEDVVRTLRRLAEQGRSLICTIHQPSYKIFRLFDRLVLLSLGRVVYQGKIDDVEGYFSTIGYETPRGENPIDFYMAVMQLAPGEEPMGGGRPGGDLPTLWLEHGGDFVEEEEGGREGGLSWFPSSASSNSLGGMMSRTGSVQSLASAEGGGEGGGEGGRKGMPTASSQAGMDLKTLAKDVATGVPKWYQCWVLFHRAFVDSLKDTDKFLGGLILKGSIGLLVGVVWLRQGESAEQKSIFPLTGALFIATTSSVLDTLFACILTFPSMKTLLLREYKNGSYSLLPFYVATLANAILFNGGYAIFLGTPIYFLVGDVSNARLLGQPFDAARYFLFLALLAVLATIGAALGLAVGALVKDIQQGQQAVMPTVIPLLLFSGYLIPFKQIPSYFKWLYHCSPFAYAMTALQAVLFRDVVFDDCGPPPCPNVCYGDRKLCFSTGREYLASVNSDPDNIGWSFGMLGVTFAVLFLAGYACMSVLVRKKTN 713
            MNKSDLKTPLVGSSREHVAIPVVTAHSQQGQDGKSFGNEATTNMDRIVPITLEVKQLNYYLGNGKHEKRILKDVNLHFKSGMLTELMGPSGAGKTTLLNLLIGNAGGRIEGSVEVNGRALKKVANVFKKFYTFVPQDDSLLASLSTRETLMFAARLRLPMTMPMAEKKRRVNRVLAELSLIRCADQRIGDVDRRGISGGERKRASIALELLVNPSVMFIDEPTSGLDSKMAEDVVRTLRRLAEQGRSLICTIHQPSYKIFRLFDRLVLLSLGRVVYQGKIDDVEGYFSTIGYETPRGENPIDFYMAVMQLAPGEEPMGGGRPGGDLPTLWLEHGGDFVEEEEGGREGGLSWFPSSASSNSLGGMMSRTGSVQSLASAEGGGEGGGEGGRKGMPTASSQAGMDLKTLAKDVATGVPKWYQCWVLFHRAFVDSLKDTDKFLGGLILKGSIGLLVGVVWLRQGESAEQKSIFPLTGALFIATTSSVLDTLFACILTFPSMKTLLLREYKNGSYSLLPFYVATLANAILFNGGYAIFLGTPIYFLVGDVSNARLLGQPFDAARYFLFLALLAVLATIGAALGLAVGALVKDIQQGQQAVMPTVIPLLLFSGYLIPFKQIPSYFKWLYHCSPFAYAMTALQAVLFRDVVFDDCGPPPCPNVCYGDRKLCFSTGREYLASVNSDPDNIGWSFGMLGVTFAVLFLAGYACMSVLVRKKTN
Sbjct:    1 MNKSDLKTPLVGSSREHVAIPVVTAHSQQGQDGKSFGNEATTNMDRIVPITLEVKQLNYYLGNGKHEKRILKDVNLHFKSGMLTELMGPSGAGKTTLLNLLIGNAGGRIEGSVEVNGRALKKVANVFKKFYTFVPQDDSLLASLSTRETLMFAARLRLPMTMPMAEKKRRVNRVLAELSLIRCADQRIGDVDRRGISGGERKRASIALELLVNPSVMFIDEPTSGLDSKMAEDVVRTLRRLAEQGRSLICTIHQPSYKIFRLFDRLVLLSLGRVVYQGKIDDVEGYFSTIGYETPRGENPIDFYMAVMQLAPGEEPMGGGRPGGDLPTLWLEHGGDFVEEEEGGREGGLSWFPSSASSNSLGGMMSRTGSVQSLASAEGGGEGGGEGGRKGMPTASSQAGMDLKTLAKDVATGVPKWYQCWVLFHRAFVDSLKDTDKFLGGLILKGSIGLLVGVVWLRQGESAEQKSIFPLTGALFIATTSSVLDTLFACILTFPSMKTLLLREYKNGSYSLLPFYVATLANAILFNGGYAIFLGTPIYFLVGDVSNARLLGQPFDAARYFLFLALLAVLATIGAALGLAVGALVKDIQQGQQAVMPTVIPLLLFSGYLIPFKQIPSYFKWLYHCSPFAYAMTALQAVLFRDVVFDDCGPPPCPNVCYGDRKLCFSTGREYLASVNSDPDNIGWSFGMLGVTFAVLFLAGYACMSVLVRKKTN 713          
BLAST of EWM28438.1 vs. NCBI_GenBank
Match: gi|470397101|ref|XP_004335198.1| (ABC2 type transporter superfamily protein [Acanthamoeba castellanii str. Neff] >gi|440791953|gb|ELR13185.1| ABC2 type transporter superfamily protein [Acanthamoeba castellanii str. Neff])

HSP 1 Score: 320.087 bits (819), Expect = 1.749e-95
Identity = 218/690 (31.59%), Postives = 351/690 (50.87%), Query Frame = 0
Query:   39 EATTNMDRIVPITLEVKQLNYYLGNGKHEKR----------ILKDVNLHFKSGMLTELMGPSGAGKTTLLNLLIG-NAGGRIEGSVEVNGRALKKVANVFKKFYTFVPQDDSLLASLSTRETLMFAARLRLPMTMPMAEKKRRVNRVLAELSLIRCADQRIGDVDRRGISGGERKRASIALELLVNPSVMFIDEPTSGLDSKMAEDVVRTLRRLAEQGRSLICTIHQPSYKIFRLFDRLVLLSLGRVVYQGKIDDVEGYFSTIGYETPRGENPIDFYMAVMQLAPGEEPMGGGRPGGDLPTLWLEHGGDFVEEEEGGREGGLSWFP-------SSASSNSLGGMMSRTGS-----VQSLASAEGGGEGGGEGGRKGMPTASSQAG-MDLKTLAKDVATGVPKWYQCWVLFHRAFVDSLKDTDKFLGGLILKGSIGLLVGVVWLRQGESAEQKSIFPLTGALFIATTSSVLDTLFACILTFPSMKTLLLREYKNGSYSLLPFYVATLANAILFNGGYAIFLGTPIYFLVGDVSNARLLGQPFDAARYFLFLALLAVLATIGAALGLAVGALVKDIQQGQQAVMPTVIPLLLFSGYLIPFKQIPSYFKWLYHCSPFAYAMTALQAVLFRDVVFDDCGPPPCPN-VCYGDRKLCFSTGREYLASVNSDP-DNIGW-SFGMLGVTFAVLFLAGY 701
            EATT    + PIT+    L Y +      K+          +LK+++     G LT +MGPSGAGKTTLLN LIG ++GG+  G V +NG + KKV   +K+   +V QDD L  +L+ RE L F+ARLR+    P +  +RRV  ++ EL L  C + RIG+V+ RGISGG+RKRASI +E++ +PSV+F+DEPTSGLD   +  +V TLR LA +GR+++ TIHQPS  IF +FD+L+L+  G ++Y G   +V  YF+ +GY  P+  NP ++   +M LA  +  +G    G +     +    +    ++G R       P       SSA ++ L   + +  +            +   +   E GR     AS +A  MD   LA           +  +L +R F++ L++       +I    + ++VG+++LR G+  ++ SI    GALF   T+  +DTL + ++ F S + + ++E+  G+Y    +YVA     + F   Y        Y++VG  +         DA ++F+F+A + ++  + A+L +A+ A   ++      +    IP  +FSG L+    +PS+  W+ + S F Y    L    F  + F  C P    N  C       ++TG++ L ++N D  +N  W SF  L +  A+  +  Y
Sbjct:   31 EATTTHTSVTPITISWSDLGYTVATKPEGKKFAFKKTGKRFLLKNLHGTILPGELTCIMGPSGAGKTTLLNTLIGKDSGGKQVGQVRINGTSRKKVGRSWKRMSAYVTQDDILSPNLTPREELWFSARLRVDK--PSSTVRRRVEELIHELGLSGCGNSRIGNVEHRGISGGQRKRASIGVEMITDPSVLFLDEPTSGLDYSTSYTLVETLRTLASKGRTIVSTIHQPSTDIFLMFDKLILMCEGHIIYSGPTSEVVAYFADLGYPCPQYTNPAEY---IMNLAKIDSYIGTKEEGVERVKCLV----NAYRSKQGLRRLTADEDPLNAEHQDSSAEADLLQNKVEKPSTNDGDEDDEEGKDDSRRQDDVESGR-----ASEEAEVMDKSQLASATGGKPSSILRLGLLLYRTFLERLREPTATYLHVIQTLFLAIVVGIIYLRIGDDNDRTSIDDRKGALFFVITNESIDTLMSVVMIFHSERMIFIKEHSAGAYGTFLYYVAKNLAQLPFLAFYPALFSCIAYWMVGFQA---------DADKFFIFMAAMILVTLVSASLAIAISASTPNLDAAFALLPAAFIPFTIFSGLLVNEDSVPSWVAWVKYFSLFKYGFQILAINEFDGLQF-TCEPSERVNGTC------IYATGQDVLDAMNLDKEENQIWASFLFLFMQLALWNVVAY 690          
BLAST of EWM28438.1 vs. NCBI_GenBank
Match: gi|470530321|ref|XP_004368226.1| (ABC2 type transporter superfamily protein [Acanthamoeba castellanii str. Neff] >gi|440804594|gb|ELR25471.1| ABC2 type transporter superfamily protein [Acanthamoeba castellanii str. Neff])

HSP 1 Score: 312.768 bits (800), Expect = 1.770e-92
Identity = 230/660 (34.85%), Postives = 327/660 (49.55%), Query Frame = 0
Query:   65 KHEKRILKDVNLHFKSGMLTELMGPSGAGKTTLLNLLIGNA-GGRIEGSVEVNGRALKKVANVFKKFYTFVPQDDSLLASLSTRETLMFAARLRLPMTMPMAEKKRRVNRVLAELSLIRCADQRIGDVD-RRGISGGERKRASIALELLVNPSVMFIDEPTSGLDSKMAEDVVRTLRRLAEQGRSLICTIHQPSYKIFRLFDRLVLLSLGRVVYQGKIDDVEGYFSTIGYETPRGENPIDFYMAVMQLAPGEEPMGGGRPGGDLPTLWLEHGGDFVEE--EEGGREGGLSWFPSSASS----NSLGGMMSRTGSVQSLASAEGGGEGGG--EGGRKGMPTASSQAGMDLKTLAKDVATGVPKWYQCWVLFHRAFVDSLKDTDKFLGGLILKGSIGLLVGVVWLRQGESAEQKSIFPLTGALFIATTSSVLDTLFACILTFPSMKTLLLREYKNGSYSLLPFYVATLANAILFNGGYAIFLGTPIYFLVGDVSNARLLGQPFDAARYFLFLALLAVLATIGAALGLAVGALVKDIQQGQQAVMPTVIPLLLFSGYLIPFKQIPSYFKWLYHCSPFAYAMTALQAVLFRDVVFDDCGPPPCPNVCYGDRKLCFSTGREYLASVNSD--PDNIGWSFGMLGVTFAVLFLAGYACMSVLVRKKT 712
            K  K ILK ++ HF  G L  +MGPSGAGKT+ LNLL G    G++ G + VNG  L +  + FK+   +V Q+D+LL +L+ RE L ++A LRLP +MP  EK  RV +VL +L+L+RCAD R+G     RGISGGER+R SI L+L+VNP ++F+DEPTSGLDS MAE VV  LR LA QGR+++CTIHQPS + F LFD +  L+ G +VY G +  + GYF T GY  P+  NP D YM +M  +   E     +    L     +H      E      R   LS  PS  S     +   G                GG GG   E   + +P         LK              Q  +L  RA+   ++D       LI+  +IG++VG+++L+ G    Q  I    G LF+  T +V  T  + +  FP+ +   LREY NG Y +  +Y+A     I F+  + +   T  Y++VG            DA  +F+ L ++ +++ I  +LGL V ++  ++         TVIP +L  G  +    IP YF WL + SPF YA   L      DV F          VC          G E L  ++ D  P  +G    + G+ + +L L  Y  +  L RK++
Sbjct:  102 KESKEILKPMSGHFLPGRLVAIMGPSGAGKTSFLNLLSGRTREGKLGGEILVNGHKLSR--DQFKRASAYVMQEDTLLGNLTPRELLTYSALLRLPRSMPKHEKLERVEKVLRQLNLVRCADTRVGVPGVTRGISGGERRRVSIGLDLIVNPRLLFLDEPTSGLDSTMAEQVVTILRNLARQGRTVVCTIHQPSSETFNLFDDVFWLANGSLVYSGPVAKLTGYFKTQGYACPKFTNPADHYMRLMSRSEQVEEEDYVKRIETLADHQKQHAALIPIEGYRLPARCLTLSHGPSQGSGISPIDHHHGREDDDADGDGDGRKVAGGSGGDDVEFRNEKLPKLKKAGPRFLK--------------QFLILLARAWKCYIRDPGVTKQRLIITLNIGVVVGLLFLQLGHY--QSDIQNRQGVLFLMITQAVFMTGNSVLYLFPTERPTFLREYGNGMYGVTAYYLAKSTADIPFHIVFPVIGTTITYWMVGLRE---------DAGAFFICLGVILLVSNIAQSLGLLV-SVGTELPVALTIFPVTVIPHMLVGGLFLVVSDIPKYFIWLQYISPFFYAFVTLVRNEMEDVTFKCRSSEMVLGVC------PIVNGNEQLDRLDFDRYPTWVG-PICLAGL-YLILRLLTYLSLVYLARKRS 725          
BLAST of EWM28438.1 vs. NCBI_GenBank
Match: gi|470450422|ref|XP_004340384.1| (ABC2 type transporter superfamily protein [Acanthamoeba castellanii str. Neff] >gi|440797268|gb|ELR18360.1| ABC2 type transporter superfamily protein [Acanthamoeba castellanii str. Neff])

HSP 1 Score: 297.36 bits (760), Expect = 7.300e-87
Identity = 216/674 (32.05%), Postives = 341/674 (50.59%), Query Frame = 0
Query:   46 RIVPITLEVKQLNYYLG--NGKH------EKRILKDVNLHFKSGMLTELMGPSGAGKTTLLNLLIGNA-GGRIEGSVEVNGRALKKVANV-FKKFYTFVPQDDSLLASLSTRETLMFAARLRLPMTMPMAEKKRRVNRVLAELSLIRCADQRIGDVDRRGISGGERKRASIALELLVNPSVMFIDEPTSGLDSKMAEDVVRTLRRLAEQGRSLICTIHQPSYKIFRLFDRLVLLSLGRVVYQGKIDDVEGYFSTIGYETPRGENPIDFYMAVMQLAPGEEPMGGGRPGGDLPTLWLEHGGDFVEEEEGGREGGLSWFPSSASSNSLGGMMSRTGSVQSLASAEGGGEGGGEGGRKGMPTASSQAGMDLKTLAKDVA----TGVPKWYQCW-VLFHRAFVDSLKDTDKFLGGLILKGSIGLLVGVVWLRQGESAEQKSIFPLTGALFIATTSSVLDTLFACILTFPSMKTLLLREYKNGSYSLLPFYVATLANAILFNGGYAIFLGTPIYFLVGDVSNARLLGQPFDAARYFLFLALLAVLATIGAALGLAVGALVKDIQQGQQAVMPTV-IPLLLFSGYLIPFKQIPSYFKWLYHCSPFAYAMTALQAVLFRDVVFDDCGPPPCPNVCYGDRKLCFSTGREYLASVNSDPDNIGWSFGMLGVTFAVLFLAGYAC 703
            + +P+TL  K L Y +    GK+      +K +LKD++   + G +T +MGPSGAGKTTLLNLL G   GG+ +GS+ VN      +++  +++  ++V QDD +   L+ RET  F+A+L+LP+T     KK +V+ ++ EL L +C   +IG+ ++RGISGG+RKR SI +E++ +PS++F+DEPTSGLDS  +  +V  LR LA  GR+++ TIHQPS  IF  FDRL+LL+ G +VY G   DV  YF+ +GY  P+  NP +F M +++                           ++  +E G E       +  + N+L  +    G     A A+G    GG   +        +     +   +DV+    T  P +   W +L  R+ +  L+D  +    LI    +  LVG ++L+ G++  Q+SI    G+LF    S  +  +  C++ F + + + +RE+  G YS L +Y+A +   I       I  GT  Y++VG  S A          RYF+F+A    +  +  ALGL++ A   ++     A+ P + IPL+L  G+ +    IP +  W+ + SPF YA   +    F  + F  C P P         + C  TG + L ++N D D      G L  +F  LFL    C
Sbjct:   65 KFIPVTLAFKNLFYSVQVRKGKNPFQKKQKKTLLKDLHGELRPGEVTAIMGPSGAGKTTLLNLLAGRVQGGKTKGSLTVNDFPKDHISSRRWQRLSSYVMQDDVMYPMLTPRETFWFSAQLKLPLTE--RNKKAKVDALIEELGLEKCQRTKIGNAEQRGISGGQRKRVSIGMEMITDPSILFLDEPTSGLDSSTSYSLVEKLRHLAAMGRTIVTTIHQPSTDIFFKFDRLMLLADGHMVYNGPTKDVVAYFAKLGYTCPQYTNPAEFIMNLVK------------------------ADSYISSKEDGEERLKHLIRAFRADNNLPELTEDGG-----AYADGIKRSGGSDTKLKKRKMMKKKRHHHRDGDEDVSKIPVTSGPNFLYRWGLLCLRSGIMQLRDPLQVPARLIQALFLAFLVGFLYLQIGDN--QRSIADRQGSLFFVVMSLSMGPMMGCLVVFQAERVIFIREHSTGCYSTLAYYLAKVFADIPALLVVPIVQGTISYWMVGYQSAAD---------RYFIFIAACIAVTLVAHALGLSISAGAPNLDVS-MAISPILFIPLMLLGGFYLSDDSIPKWLIWIKYFSPFKYAFNIVARNEFEGLTF-TCDPDPT--------EACTPTGEKVLHNLNLDNDE-----GSLWASF--LFLLMQYC 679          
BLAST of EWM28438.1 vs. NCBI_GenBank
Match: gi|198427726|ref|XP_002129068.1| (PREDICTED: ATP-binding cassette sub-family G member 4 [Ciona intestinalis])

HSP 1 Score: 297.36 bits (760), Expect = 7.314e-87
Identity = 213/673 (31.65%), Postives = 333/673 (49.48%), Query Frame = 0
Query:   49 PITLEVKQLNYYLGNG-----KHEKRILKDVNLHFKSGMLTELMGPSGAGKTTLLNLLIGNAGGRIEGSVEVNGRALKKVANVFKKFYTFVPQDDSLLASLSTRETLMFAARLRLPMTMPMAEKKRRVNRVLAELSLIRCADQRIGDVDRRGISGGERKRASIALELLVNPSVMFIDEPTSGLDSKMAEDVVRTLRRLAEQGRSLICTIHQPSYKIFRLFDRLVLLSLGRVVYQGKIDDVEGYFSTIGYETPRGENPIDFYMAVMQLAPGEEPMGGGRPGGDLPTLWLEHGGDFVEEEEGGREGGLSWFPSSASSNSLGGMMSRTGSVQSLASAEGGGEGGGEGGRKGMPTASSQAGMD-LKTLAKDVATGVPKWYQCWVLFHRAFVDSLKDT----DKFLGGLILKGSIGLLVGVVWLRQGESAEQKSIFPLTGALFIATTSSVLDTLFACILTFPSMKTLLLREYKNGSYSLLPFYVATLANAILFNGGYAIFLGTPIYFLVGDVSNARLLGQPFDAARYFLFLALLAVLATIGAALGLAVGALVKDIQQGQQAVMPTVIPLLLFSGYLIPFKQIPSYFKWLYHCSPFAYAMTALQAVLFRDVVFDDCGPPPCPNVCYGDRKL-C-FSTGREYLASVNSDPDNIGWSFGMLGVTFAVLFLAGYACMSVLVR 709
            P+ ++   L+Y +  G     K  K ILK VN  F S  LT ++GPSGAGK++L+NLL G     ++G + VNG    + +  F+K   ++ QDD LL  L+  E++M +A L+L    P   K+  V  +L  L L+ C   R  D     +SGG+RKR +IALEL+ NP VMF DEPTSGLDS  +  V+  L+ LA  GR++IC+IHQPS K+F +FDRL +L  G+ VYQG +  +  +    G   P+  NP D+   ++++A GE        G  +PTL        V+  E G+    +     AS++++    S     Q + +       G +     +    S AG+    T   +  T      Q +VL  R F+  ++D      +FL  +I    IG+L+G+++L  G++AE+  +    G LF +    +  +L   +LTFP   T+ +RE+ N  YSL  +Y+A     I F   + +F  T +YF+           QP++A R+ LF++L  + + +  +LGL +GA    +Q        T IP+LLFSG+ + F+ IP Y KW+ + S   Y         F  ++    G       C  DR + C F      L  ++ +  N+   F +LG+ F  L    Y  + + V+
Sbjct:   78 PVEIKFVNLSYSVREGSIFRNKGFKCILKCVNGTFSSCQLTGILGPSGAGKSSLMNLLTGYRERGMKGEILVNG--FPRDSRAFRKLSCYIMQDDRLLPHLTVMESMMVSANLKLDSNSPTHAKQEIVTEILGTLGLMPCRKTRTVD-----LSGGQRKRLAIALELVNNPPVMFFDEPTSGLDSVSSFQVLSLLKSLALGGRTVICSIHQPSAKLFEMFDRLYILGTGQCVYQGSVPGLLPFLRDNGLSCPQYHNPADY---IIEVASGEY-------GEVVPTL--------VQAVEAGKCEYYTQHYEKASNSAIVSNSSSKEEDQWMKNGSMSTLNGDKPELDNLKNIDSDAGVQACHTFNTNCFT------QFYVLLKRTFISIVRDQMLTHIRFLSHVI----IGVLIGLLYLDIGDNAEK--VLNNAGFLFFSVLFIMFASLMPTVLTFPMEMTVFMREHMNYWYSLKAYYIAKTLADIPFQVIFPVFYCTIVYFMT---------SQPYEADRFLLFVSLFIMTSIVAQSLGLLIGAASTSLQVATFVGPITAIPVLLFSGFFVRFEVIPWYLKWISYSSYIRYG--------FEGILVSIYGLNRTELQCNNDRGIGCQFRDTSRVLQEMDVEESNLALDFVILGIFFFGLRFLAYLVLRLRVK 696          
BLAST of EWM28438.1 vs. NCBI_GenBank
Match: gi|1139837384|ref|XP_019930506.1| (PREDICTED: ATP-binding cassette sub-family G member 1-like isoform X1 [Crassostrea gigas])

HSP 1 Score: 288.5 bits (737), Expect = 1.148e-83
Identity = 211/669 (31.54%), Postives = 323/669 (48.28%), Query Frame = 0
Query:   51 TLEVKQLNYYLGNG-KHE--KRILKDVNLHFKSGMLTELMGPSGAGKTTLLNLLIGNAGGRIEGSVEVNGRALKKVANVFKKFYTFVPQDDSLLASLSTRETLMFAARLRLPMTMPMAEKKRRVNRVLAELSLIRCADQRIGDVDRRGISGGERKRASIALELLVNPSVMFIDEPTSGLDSKMAEDVVRTLRRLAEQGRSLICTIHQPSYKIFRLFDRLVLLSLGRVVYQGKIDDVEGYFSTIGYETPRGENPIDFYMAVMQLAPGEEPMGGGRPGGDLPTLWLEHGGDFVEEEEGGREGGLSWFPSSASSNSLGG-----MMSRTGSVQSLASAEGGGEG------GGEGGRKGMPTASSQAGMDLKTLAKDVATGVPKWYQCWVLFHRAFVDSLKDTDKFLGGLILKGSIGLLVGVVWLRQGESAEQ---KSIFPLTGALFIATTSSVLDTLFACILTFPSMKTLLLREYKNGSYSLLPFYVATLANAILFNGGYAIFLGTPIYFLVGDVSNARLLGQPFDAARYFLFLALLAVLATIGAALGLAVGALVKDIQQGQQAVMPTVIPLLLFSGYLIPFKQIPSYFKWLYHCSPFAYAMT-ALQAVLFRDVVFDDCGPPPCPNVCYGDRKLCFSTGREYLASVNSDPDNIGWSFGMLGVTFAVLFLAGY 701
            ++E K L Y + +G +H   K ILK ++  F+SG LT +MGPSGAGK++L+N+L G     + G + V G+   +    F+K   ++ QDD LL  LS  E++M +A L+L   M   EK+ RV+ +L  L L+     R  +     +SGG+RKR SIALEL+ NP +MF DEPTSGLDS      V  L+ LA  GR++ICTIHQPS K+F +FD L +L+ G  +Y+G   D+  Y S+ G   P+  NP D+ M V     GEE +        + ++   H  +         EG  +  P +  +N+  G        +    QSL   E    G      G   G+K   + S++   DL+      AT    + Q  +LF R  +  L+DT      LI   ++G+L+G+++L  G  A +    + F     LF+  T+     L   ++TFP    + +RE+ N  YS+  +Y+A     + F   + +  G+ +Y++           QP D +R+ +FL L    + +  +LGL +GA    +Q        T IP+LLFSG+ + F  IP Y +WL + S   Y+    LQA+   D    +C   PC           FS   E L  ++         F +L   F +L +  Y
Sbjct:   55 SVEFKDLIYQVRDGGRHTGPKTILKSISGEFRSGELTAIMGPSGAGKSSLMNILAGYRTLNVTGKIHVKGK--DRDLRTFRKISCYIMQDDHLLPHLSVEESMMCSANLKLTEKMSSREKEERVDEILDTLGLLETKKTRTSN-----LSGGQRKRLSIALELVNNPPLMFFDEPTSGLDSASCFQCVSLLKSLAAGGRTIICTIHQPSAKLFEMFDHLYMLAEGNCIYRGTTKDLVPYLSSQGLMCPQYHNPADYAMEVASGEYGEEKVSKL-----INSIHNGHCEEIARRNAKLEEGSRTPSPPATPNNNTQGNGVIPTTPQDPEKQSLLECENFTNGKVVHYNGSLKGKKDQDSDSTEDVQDLE--CHTFATSC--FTQFRILFVRTLLSILRDTTLTRLRLISHLTVGILIGLLYLGIGNEASKWLNNASFLFFCMLFLMFTA-----LMPTVMTFPIEMAVFVREHLNYWYSVKAYYLAKTMADMPFQIVFPLVYGSIVYWMT---------SQPSDFSRFVMFLTLATQTSLVAQSLGLLIGA-ATSLQVSVFLGPVTAIPILLFSGFFVNFDTIPVYLQWLSYISYVRYSFEGVLQAIYGFDRDTLECEKQPC----------YFSKPEEILQQMDVQDAKFYIDFIVLCAFFVILRIGCY 682          
BLAST of EWM28438.1 vs. NCBI_GenBank
Match: gi|817191643|ref|XP_012271226.1| (PREDICTED: ATP-binding cassette sub-family G member 4 [Orussus abietinus] >gi|817191645|ref|XP_012271227.1| PREDICTED: ATP-binding cassette sub-family G member 4 [Orussus abietinus])

HSP 1 Score: 288.886 bits (738), Expect = 2.158e-83
Identity = 193/623 (30.98%), Postives = 304/623 (48.80%), Query Frame = 0
Query:   23 VTAHSQQGQDGKSFGNEAT--TNMDRIVPITLEVKQLNYYLGNGKHE--KRILKDVNLHFKSGMLTELMGPSGAGKTTLLNLLIGNAGGRIEGSVEVNG--RALKKVANVFKKFYTFVPQDDSLLASLSTRETLMFAARLRLPMTMPMAEKKRRVNRVLAELSLIRCADQRIGDVDRRGISGGERKRASIALELLVNPSVMFIDEPTSGLDSKMAEDVVRTLRRLAEQGRSLICTIHQPSYKIFRLFDRLVLLSLGRVVYQGKIDDVEGYFSTIGYETPRGENPIDFYMAVMQLAPGEEPMGGGRPGGDLPTLWLEHGGDFVEEEEGGREGGLSWFPSS-ASSNSLGGMMSRTGSVQSLASAEGGGEGGGEGGRK------GMPTASSQAGMD-LKTLAKDVATGVPKWYQCWVLFHRAFVDSLKDTDKFLGGLILKGSIGLLVGVVWLRQGESAEQKSIFPLTGALFIATTSSVLDTLFACILTFPSMKTLLLREYKNGSYSLLPFYVATLANAILFNGGYAIFLGTPIYFLVGDVSNARLLGQPFDAARYFLFLALLAVLATIGAALGLAVGALVKDIQQGQQAVMPTVIPLLLFSGYLIPFKQIPSYFKWLYHCSPFAYA 631
            V  HS     G+S    A   T++ +  P+ +E K L Y +  G+    K ILK VN  F+SG LT +MGPSGAGK+TL+N+L G     + GSV +NG  R L++    F+K   ++ QDD LL  L+  E +  +A L+L   +  + KK  +  ++  L L         +   + +SGG+RKR SIALEL+ NP VMF DEPTSGLDS      +  L+ L+  GR++ICTIHQPS ++F +FD L LL+ G+ +YQG +  +  + S++G + P   NP D+   VM++A GE                 E     V     GR      +  + A++ ++   + +    Q     EG G   G            MP + + + +D  +++ + V      W Q W+L  R F+  ++D       LI    +G L+G ++   G  A +  +    G +F      +   L   ILTFP    + +RE+ N  YSL  FY A     + F   Y++     +YF+           QP +  R+F++L +  + A +  ++GL +GA +  ++ G        +P++LFSG+ + FK IP Y K+L + S   Y+
Sbjct:   85 VPNHSGASPGGQSNKKPAVSLTHLPKRPPVDIEFKNLAYSVSEGRKRGYKTILKCVNGKFRSGELTAIMGPSGAGKSTLMNVLAGYKTSHLSGSVLINGKDRNLRR----FRKMSCYIMQDDRLLPHLTVYEAMNVSANLKLGKDISKSSKKIVIEEIIETLGL-----SEASNTQTQRLSGGQRKRLSIALELVNNPPVMFFDEPTSGLDSSSCFQCLNLLKSLSRGGRTIICTIHQPSARLFEMFDHLYLLAEGQCIYQGNVGGLVPFLSSMGLDCPSYHNPADY---VMEVACGEHG---------------ECVHKLVMAVNNGRCNNYQHYQMTLAAAQAVSNDIVKQSPPQEQTKPEGAGMPNGVAKIPTGATVINMPVSCTTSLLDSAESIEQKVGFPNSGWIQFWILLKRTFLSQIRDMTLTTVRLISHIIVGFLIGAIYYNIGNEASE--VMSNAGCIFFTIMFLMFTALMPTILTFPMEMAVFVREHLNYWYSLKAFYFARTLIDLPFQIVYSVAYIVIVYFMT---------SQPLEPERFFMYLNICVLTALVSQSIGLVIGAAM-SVETGVFVGPVCSVPIVLFSGFFVNFKAIPRYLKFLSYVSYIRYS 668          
BLAST of EWM28438.1 vs. NCBI_GenBank
Match: gi|330796509|ref|XP_003286309.1| (hypothetical protein DICPUDRAFT_54176 [Dictyostelium purpureum] >gi|325083736|gb|EGC37181.1| hypothetical protein DICPUDRAFT_54176 [Dictyostelium purpureum])

HSP 1 Score: 288.886 bits (738), Expect = 2.977e-83
Identity = 217/687 (31.59%), Postives = 330/687 (48.03%), Query Frame = 0
Query:   50 ITLEVKQLNYYL--------GNGKHEKRILKDVNLHFKSGMLTELMGPSGAGKTTLLNLLIGNAGGRIEGSVEVNGRALKKVANVFKKFYTFVPQDDSLLASLSTRETLMFAARLRLPMTMPMAEKKRRVNRVLAELSLIRCADQRIGDVDR--RGISGGERKRASIALELLVNPSVMFIDEPTSGLDSKMAEDVVRTLRRLAEQGRSLICTIHQPSYKIFRLFDRLVLLSLGRVVYQGKIDDVEGYFSTIGYETPRGENPIDFYMAVMQLAPGEEPMGGGRPGGDLPTLWLEHGGDFVEEEEGGREGGLSWFPSSASSNSLGGM-MSRTGSVQSLASAEGG-------GEGGGEGGRKGMPTASSQAGMDLKTLAKDVATGVPKWYQCWVLFHRAFVDSLKDTDKFLGGLILKGSIGLLVGVVWLRQGESAEQKSIFPLTGALFIATTSSVLDTLFACILTFPSMKTLLLREYKNGSYSLLPFYVAT----LANAILFNGGYAIFLGTPIYFLVGDVSNARLLGQPFDAAR-YFLFLALLAVLATIGAALGLAVGALVKDIQQGQQAVMPTVIPLLLFSGYLIPFKQIPSYFKWLYHCSPFAYAMTALQAVLFRDVVFDDCGPP-----PCPNVCYGDRKLCFSTGREYLASVNSDPDNIGWSFGMLGVTFAVLFLAGYACMSVLV 708
            +    K +N+Y+        G  K  K+IL ++N H KSG +  +MGPSGAGKTTLL++L         G++ +NG   K    +FKK   +V Q DSL  S++ RETL F A+L++P +  M EK +RV  V+ E+ L RC++  +G  D   RGISGGER+R +IA+ELL  PS++F+DEPTSGLD+  A  V+R +R+LA+ GRS+ICTIHQP   I+ +FDRL+LL  G V+Y G       YFS  GY+     NP DF+M ++ L   E+ +             LE                    PSS++S  L G+  ++    + L + E G           G    + + T S +   D K    +   G   + Q  +L +R  +++ +    F   L      GLL GVV+ + G    Q S+   TG L               I  FP + T+ L++  +G Y+ LPF++A     + NAI       +  GT +Y++     N R+   PF AA  +F FL +L + A    +LG+ + + V ++Q G       VI   LFSG+ I    +P +  W  + S F Y + +     F +V F  C         CPN            G E + ++  D D+   +  +L +     ++ G+  ++ LV
Sbjct:  100 VDFSFKDINHYVTTVTKTEKGRKKISKQILTNINGHVKSGEMISIMGPSGAGKTTLLDILAHRLPINGSGTIYLNGN--KSNFQIFKKLCGYVTQHDSLTPSMTVRETLNFYAQLKMPRSTTMEEKLQRVQDVITEMGLKRCSETLVGTADSKIRGISGGERRRVTIAIELLTGPSILFLDEPTSGLDASTAYSVMRAIRKLAKSGRSVICTIHQPRSNIYDMFDRLLLLGEGNVIYCGDTTKAVDYFSRYGYQCGDLTNPADFFMDLINLQV-EDQIDSDDEDEYDEEENLEIAT-----------------PSSSTSPVLSGVPKAKIRKNKKLTTEEIGVLKKEYPQSDEGVMIAQTLDTISKENRNDFK---YEKIEGPTFFTQFRLLLYREVLNARRHPLAFKVQLFQAMFQGLLCGVVYYQLG--VGQSSVQSRTGVLAFVVMGISFPFTMTTIHVFPDVITIFLKDRASGVYNTLPFFLAKSFIDMCNAICL----PVITGTIVYWM----CNERVY--PFYAAAPFFRFLLVLVMNAQTALSLGVLISSSVPNVQVGTAVAPLVVILFFLFSGFFINLNDVPGWLVWFPYISFFKYIIESAVINGFENVEF-TCTESQKIGGQCPN----------QYGNEIIKNMGYDVDHFWRNIWILAI-----YIIGFRTITFLV 735          
BLAST of EWM28438.1 vs. NCBI_GenBank
Match: gi|1139837386|ref|XP_019930507.1| (PREDICTED: ATP-binding cassette sub-family G member 1-like isoform X2 [Crassostrea gigas])

HSP 1 Score: 284.648 bits (727), Expect = 2.438e-82
Identity = 210/666 (31.53%), Postives = 318/666 (47.75%), Query Frame = 0
Query:   51 TLEVKQLNYYLGNG-KHE--KRILKDVNLHFKSGMLTELMGPSGAGKTTLLNLLIGNAGGRIEGSVEVNGRALKKVANVFKKFYTFVPQDDSLLASLSTRETLMFAARLRLPMTMPMAEKKRRVNRVLAELSLIRCADQRIGDVDRRGISGGERKRASIALELLVNPSVMFIDEPTSGLDSKMAEDVVRTLRRLAEQGRSLICTIHQPSYKIFRLFDRLVLLSLGRVVYQGKIDDVEGYFSTIGYETPRGENPIDFYMAVMQLAPGEEPMGGGRPGGDLPTLWLEHGGDFVEEEEGGREGGLSWFPSSASSNSLGG-----MMSRTGSVQSLASAEGGGEG---GGEGGRKGMPTASSQAGMDLKTLAKDVATGVPKWYQCWVLFHRAFVDSLKDTDKFLGGLILKGSIGLLVGVVWLRQGESAEQ---KSIFPLTGALFIATTSSVLDTLFACILTFPSMKTLLLREYKNGSYSLLPFYVATLANAILFNGGYAIFLGTPIYFLVGDVSNARLLGQPFDAARYFLFLALLAVLATIGAALGLAVGALVKDIQQGQQAVMPTVIPLLLFSGYLIPFKQIPSYFKWLYHCSPFAYAMT-ALQAVLFRDVVFDDCGPPPCPNVCYGDRKLCFSTGREYLASVNSDPDNIGWSFGMLGVTFAVLFLAGY 701
            ++E K L Y + +G +H   K ILK ++  F+SG LT +MGPSGAGK++L+N+L G     + G + V G+   +    F+K   ++ QDD LL  LS  E++M +A L+L   M   EK+ RV+ +L  L L+     R  +     +SGG+RKR SIALEL+ NP +MF DEPTSGLDS      V  L+ LA  GR++ICTIHQPS K+F +FD L +L+ G  +Y+G   D+  Y S+ G   P+  NP D+ M V     GEE +        + ++   H  +         EG  +  P +  +N+  G        +    QSL   E    G      G  KG      Q  ++  T A    T      Q  +LF R  +  L+DT      LI   ++G+L+G+++L  G  A +    + F     LF+  T+     L   ++TFP    + +RE+ N  YS+  +Y+A     + F   + +  G+ +Y++           QP D +R+ +FL L    + +  +LGL +GA    +Q        T IP+LLFSG+ + F  IP Y +WL + S   Y+    LQA+   D    +C   PC           FS   E L  ++         F +L   F +L +  Y
Sbjct:   55 SVEFKDLIYQVRDGGRHTGPKTILKSISGEFRSGELTAIMGPSGAGKSSLMNILAGYRTLNVTGKIHVKGK--DRDLRTFRKISCYIMQDDHLLPHLSVEESMMCSANLKLTEKMSSREKEERVDEILDTLGLLETKKTRTSN-----LSGGQRKRLSIALELVNNPPLMFFDEPTSGLDSASCFQCVSLLKSLAAGGRTIICTIHQPSAKLFEMFDHLYMLAEGNCIYRGTTKDLVPYLSSQGLMCPQYHNPADYAMEVASGEYGEEKVSKL-----INSIHNGHCEEIARRNAKLEEGSRTPSPPATPNNNTQGNGVIPTTPQDPEKQSLLECENFTNGKVVHYNGSLKGKKDQDVQ-DLECHTFATSCFT------QFRILFVRTLLSILRDTTLTRLRLISHLTVGILIGLLYLGIGNEASKWLNNASFLFFCMLFLMFTA-----LMPTVMTFPIEMAVFVREHLNYWYSVKAYYLAKTMADMPFQIVFPLVYGSIVYWMT---------SQPSDFSRFVMFLTLATQTSLVAQSLGLLIGA-ATSLQVSVFLGPVTAIPILLFSGFFVNFDTIPVYLQWLSYISYVRYSFEGVLQAIYGFDRDTLECEKQPC----------YFSKPEEILQQMDVQDAKFYIDFIVLCAFFVILRIGCY 676          
BLAST of EWM28438.1 vs. NCBI_GenBank
Match: gi|755933803|ref|XP_011314764.1| (PREDICTED: ATP-binding cassette sub-family G member 4 [Fopius arisanus] >gi|755933807|ref|XP_011314765.1| PREDICTED: ATP-binding cassette sub-family G member 4 [Fopius arisanus] >gi|755933810|ref|XP_011314766.1| PREDICTED: ATP-binding cassette sub-family G member 4 [Fopius arisanus])

HSP 1 Score: 284.648 bits (727), Expect = 9.031e-82
Identity = 187/614 (30.46%), Postives = 300/614 (48.86%), Query Frame = 0
Query:   40 ATTNMDRIVPITLEVKQLNYYLGNGKHE--KRILKDVNLHFKSGMLTELMGPSGAGKTTLLNLLIGNAGGRIEGSVEVNGRALKKVANVFKKFYTFVPQDDSLLASLSTRETLMFAARLRLPMTMPMAEKKRRVNRVLAELSLIRCADQRIGDVDRRGISGGERKRASIALELLVNPSVMFIDEPTSGLDSKMAEDVVRTLRRLAEQGRSLICTIHQPSYKIFRLFDRLVLLSLGRVVYQGKIDDVEGYFSTIGYETPRGENPIDFYMAVMQLAPGEEPMGGGRPGGDLPTLWLEHGGDFVEEEEGGREGGLSWFPSSASSNSLGGMMSRTGSVQS----------LASAEGGGEGGGEGGRKGMPTASSQAGMD-LKTLAKDVATGVPKWYQCWVLFHRAFVDSLKDTDKFLGGLILKGSIGLLVGVVWLRQGESAEQKSIFPLTGALFIATTSSVLDTLFACILTFPSMKTLLLREYKNGSYSLLPFYVATLANAILFNGGYAIFLGTPIYFLVGDVSNARLLGQPFDAARYFLFLALLAVLATIGAALGLAVGALVKDIQQGQQAVMPTVIPLLLFSGYLIPFKQIPSYFKWLYHCSPFAYAMTALQAVLF 640
            A T++ R  P+ +E K L Y +  G+    K ILK V    +SG LT +MGPSGAGK+TL+N+L G     + GS+ +NG+  ++    F+K   ++ QDD LL  L+  E +  +A L+L   +  A KK  +  ++  L L   ++ +      + +SGG+RKR SIALEL+ NP VMF DEPTSGLDS      +  L+ L   GR++ICTIHQPS ++F +FD L LL+ G+ +YQG +  +  + S++G + P   NP DF   VM++A GE                    G+ VE+       G      +  +N L   +S   + QS           A    G   G  G    MP + + + +D  +++ + V      W Q W+L  R F+  ++D       LI    +G L+G ++   G   E   ++   G +F      +   +   ILTFP   ++ +RE+ N  YSL  FY+A   + + F   ++I     +YF+           QP +  R+ ++L +  + A +  ++GL +GA +  ++ G      + +P++LFSG+ I +  +PSY  WL + S   Y        +F
Sbjct:  100 ALTHLPRRPPVDIEFKDLAYSVSEGRQRGYKTILKCVTGKVRSGELTAIMGPSGAGKSTLMNVLAGYKTSNLNGSILINGK--ERNLRHFRKTSCYIMQDDRLLPHLTVHEAMTVSANLKLGKDIDAAGKKVLIEEIIDTLGLSDASNTQT-----QSLSGGQRKRLSIALELVNNPPVMFFDEPTSGLDSSSCFQCLSLLKSLCRGGRTIICTIHQPSARLFEMFDNLYLLAEGQCIYQGNVHGLVPFLSSMGLDCPSYHNPADF---VMEVASGEH-------------------GECVEKLVTAVNNGKCNNYQNYQTNFLTHAVSNDIAKQSPPDGIKEGKPEALIPNGVSKGPPGAVINMPVSCTTSLLDSAESIEQKVGFPTNGWTQFWILLKRTFLSQMRDMTLTRVRLISHIIVGFLIGALYYDIGN--EGAEVYSNAGCVFFTVMFLMFTAMMPTILTFPMEMSVFVREHLNYWYSLKSFYLARTISDLPFQTVFSIAYVMIVYFMT---------SQPLETYRFLMYLNICVLTALVSQSIGLLIGASM-SVESGVFIGPVSTVPIILFSGFFIKYTAMPSYLSWLSYLSFIRYGFEGAMLTVF 672          
The following BLAST results are available for this feature:
BLAST of EWM28438.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585110835|gb|EWM28438.1|0.000e+0100.00abc transporter family protein [Nannochloropsis ga... [more]
gi|470397101|ref|XP_004335198.1|1.749e-9531.59ABC2 type transporter superfamily protein [Acantha... [more]
gi|470530321|ref|XP_004368226.1|1.770e-9234.85ABC2 type transporter superfamily protein [Acantha... [more]
gi|470450422|ref|XP_004340384.1|7.300e-8732.05ABC2 type transporter superfamily protein [Acantha... [more]
gi|198427726|ref|XP_002129068.1|7.314e-8731.65PREDICTED: ATP-binding cassette sub-family G membe... [more]
gi|1139837384|ref|XP_019930506.1|1.148e-8331.54PREDICTED: ATP-binding cassette sub-family G membe... [more]
gi|817191643|ref|XP_012271226.1|2.158e-8330.98PREDICTED: ATP-binding cassette sub-family G membe... [more]
gi|330796509|ref|XP_003286309.1|2.977e-8331.59hypothetical protein DICPUDRAFT_54176 [Dictyosteli... [more]
gi|1139837386|ref|XP_019930507.1|2.438e-8231.53PREDICTED: ATP-binding cassette sub-family G membe... [more]
gi|755933803|ref|XP_011314764.1|9.031e-8230.46PREDICTED: ATP-binding cassette sub-family G membe... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2240rna2240Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications