EWM28442.1, cds2231 (CDS) Nannochloropsis gaditana

Overview
NameEWM28442.1
Unique Namecds2231
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:1236681..1236887 -
Alignment locationCM002458.1:1236454..1236549 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM28442.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100495g2.2394.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:1236681..1236887 -
CM002458.1supercontigCM002458.1:1236454..1236549 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM28442.1 vs. NCBI_GenBank
Match: gi|585110839|gb|EWM28442.1| (hypothetical protein Naga_100495g2 [Nannochloropsis gaditana])

HSP 1 Score: 202.216 bits (513), Expect = 7.982e-66
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0 
Query:    1 MLPSIMARRSVFHSLGHLAGLPVSCRMASSSFVSPACGSSIPNTGSQHRYPSLLQTRGKHRAFEASFLQARKANYQPLSPLSFLERTVKLYPRRTAVAYR 100
            MLPSIMARRSVFHSLGHLAGLPVSCRMASSSFVSPACGSSIPNTGSQHRYPSLLQTRGKHRAFEASFLQARKANYQPLSPLSFLERTVKLYPRRTAVAYR
Sbjct:    1 MLPSIMARRSVFHSLGHLAGLPVSCRMASSSFVSPACGSSIPNTGSQHRYPSLLQTRGKHRAFEASFLQARKANYQPLSPLSFLERTVKLYPRRTAVAYR 100
The following BLAST results are available for this feature:
BLAST of EWM28442.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585110839|gb|EWM28442.1|7.982e-66100.00hypothetical protein Naga_100495g2 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2239rna2239Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications