EWM28443.1, cds2230 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28443.1 vs. NCBI_GenBank
Match: gi|585110842|gb|EWM28443.1| (amp-dependent synthetase and ligase [Nannochloropsis gaditana]) HSP 1 Score: 395.971 bits (1016), Expect = 1.120e-139 Identity = 190/190 (100.00%), Postives = 190/190 (100.00%), Query Frame = 0
Query: 1 MEAALNILKEEGASLPLVVDIVDKHYLGKGKRLGEWEFEAFLQEGDEAFDLEGPEDEMAAISLSYTSGTTGDPKGVVTHHRGAYLNSLANIVSWGTGMPLHTVFLHVVPMFHCNGWCFPWAITALAGTHVCTRWVRADLLYEAMAKYNVSHFCGAPILMNLLLSASQEHKRDLLGRNIQLMTAGAPHLPR 190
MEAALNILKEEGASLPLVVDIVDKHYLGKGKRLGEWEFEAFLQEGDEAFDLEGPEDEMAAISLSYTSGTTGDPKGVVTHHRGAYLNSLANIVSWGTGMPLHTVFLHVVPMFHCNGWCFPWAITALAGTHVCTRWVRADLLYEAMAKYNVSHFCGAPILMNLLLSASQEHKRDLLGRNIQLMTAGAPHLPR
Sbjct: 1 MEAALNILKEEGASLPLVVDIVDKHYLGKGKRLGEWEFEAFLQEGDEAFDLEGPEDEMAAISLSYTSGTTGDPKGVVTHHRGAYLNSLANIVSWGTGMPLHTVFLHVVPMFHCNGWCFPWAITALAGTHVCTRWVRADLLYEAMAKYNVSHFCGAPILMNLLLSASQEHKRDLLGRNIQLMTAGAPHLPR 190
BLAST of EWM28443.1 vs. NCBI_GenBank
Match: gi|1197215730|ref|WP_086466363.1| (acyl-CoA synthetase [Oceanibaculum sp. L54-1-50]) HSP 1 Score: 214.157 bits (544), Expect = 1.168e-63 Identity = 101/171 (59.06%), Postives = 125/171 (73.10%), Query Frame = 0
Query: 16 PLVVDIVDKHYLGKGKRLGEWEFEAFLQEGDEAFDLEGPEDEMAAISLSYTSGTTGDPKGVVTHHRGAYLNSLANIVSWGTGMPLHTVFLHVVPMFHCNGWCFPWAITALAGTHVCTRWVRADLLYEAMAKYNVSHFCGAPILMNLLLSASQEHKRDLLGRNIQLMTAGAP 186
PLV+DI D Y G G+RLG ++EAF+ GD F PEDE AISLSYTSGTTGDPKGVV HHRGAYLN+L N+++W MP H +L +PMFHCNGWCFPW +TA AGTHVC R V A +Y+A A + V+H CGAPI+M LL++A E +RD +N+++MTA AP
Sbjct: 141 PLVIDIDDPLYDGPGERLGSMDYEAFIAGGDPDFAWSLPEDEWDAISLSYTSGTTGDPKGVVYHHRGAYLNALGNVLAWN--MPRHAAYLWTLPMFHCNGWCFPWTVTAQAGTHVCLRRVEAKAIYDAFADHGVTHLCGAPIVMGLLVNAKPEDRRD-FPQNVEMMTAAAP 308
BLAST of EWM28443.1 vs. NCBI_GenBank
Match: gi|496230435|ref|WP_008944470.1| (acyl-CoA synthetase [Oceanibaculum indicum] >gi|407206140|gb|EKE76102.1| acyl-CoA synthetase [Oceanibaculum indicum P24]) HSP 1 Score: 209.149 bits (531), Expect = 1.246e-61 Identity = 98/171 (57.31%), Postives = 124/171 (72.51%), Query Frame = 0
Query: 16 PLVVDIVDKHYLGKGKRLGEWEFEAFLQEGDEAFDLEGPEDEMAAISLSYTSGTTGDPKGVVTHHRGAYLNSLANIVSWGTGMPLHTVFLHVVPMFHCNGWCFPWAITALAGTHVCTRWVRADLLYEAMAKYNVSHFCGAPILMNLLLSASQEHKRDLLGRNIQLMTAGAP 186
PLV+DI D Y G G+ LG ++EAF+ +GD F P DE AISL+YTSGTTGDPKGVV HHRGAYLN+L N+++W MP H V+L +PMFHCNGWCFPW +TA AGTHVC R V A +Y+A A + V+H CGAPI+M LL++A E +RD + +++MTA AP
Sbjct: 141 PLVIDIDDPLYDGPGEHLGSLDYEAFIADGDPDFAWHLPADEWDAISLNYTSGTTGDPKGVVYHHRGAYLNALGNVLAWN--MPRHAVYLWTLPMFHCNGWCFPWTVTAQAGTHVCLRRVEAKAIYDAFADHGVTHLCGAPIVMGLLVNAKPEERRD-FPQQVEMMTAAAP 308
BLAST of EWM28443.1 vs. NCBI_GenBank
Match: gi|739154153|ref|WP_037018399.1| (acyl-CoA synthetase [Rhizobiales bacterium YIM 77505]) HSP 1 Score: 207.608 bits (527), Expect = 3.931e-61 Identity = 99/171 (57.89%), Postives = 124/171 (72.51%), Query Frame = 0
Query: 16 PLVVDIVDKHYLGKGKRLGEWEFEAFLQEGDEAFDLEGPEDEMAAISLSYTSGTTGDPKGVVTHHRGAYLNSLANIVSWGTGMPLHTVFLHVVPMFHCNGWCFPWAITALAGTHVCTRWVRADLLYEAMAKYNVSHFCGAPILMNLLLSASQEHKRDLLGRNIQLMTAGAP 186
PLV+D D + G G+RLG E+E FL+EGD F P DE AISL+YTSGTTGDPKGVV HHRGAYL ++ N+V+ G G H V+L +PMFHCNGWCFPW+I+ +AGTHVC R+VRA +YEA+A++ V+H CGAPI+M+ LL+A E KR L +Q TA AP
Sbjct: 140 PLVIDYDDPEFTGPGERLGALEYEEFLEEGDPGFAWAMPHDEWDAISLNYTSGTTGDPKGVVYHHRGAYLLAIGNVVTCGMGK--HPVYLWTLPMFHCNGWCFPWSISVVAGTHVCLRYVRAKAMYEALAEHGVTHLCGAPIVMSTLLNAPAEEKRP-LPHTVQFFTAAAP 307
BLAST of EWM28443.1 vs. NCBI_GenBank
Match: gi|647626226|ref|WP_025899748.1| (acyl-CoA synthetase [Sneathiella glossodoripedis]) HSP 1 Score: 206.068 bits (523), Expect = 1.533e-60 Identity = 102/186 (54.84%), Postives = 130/186 (69.89%), Query Frame = 0
Query: 1 MEAALNILKEEGASLPLVVDIVDKHYLGKGKRLGEWEFEAFLQEGDEAFDLEGPEDEMAAISLSYTSGTTGDPKGVVTHHRGAYLNSLANIVSWGTGMPLHTVFLHVVPMFHCNGWCFPWAITALAGTHVCTRWVRADLLYEAMAKYNVSHFCGAPILMNLLLSASQEHKRDLLGRNIQLMTAGAP 186
+ AL++ K S P+V+DI D G G LGE ++E FLQ GD FD GPEDE AI+L+YTSGTTGDPKGVV HHRGAYL + N +SW M H ++L +PMFHCNGWCFPW ITA+ GTHVC R V ADL+Y+AM +YNV H CGAPI++++L++A+ E K + I++M A AP
Sbjct: 129 VREALDLCK----SKPVVIDIDDPLGSG-GDLLGEMDYEQFLQSGDPDFDWSGPEDEWQAIALNYTSGTTGDPKGVVYHHRGAYLAATGNTLSWN--MSKHPIYLWTLPMFHCNGWCFPWTITAVGGTHVCLRKVEADLIYDAMGRYNVDHMCGAPIVLSMLINATDESKAK-ANKGIKVMVAAAP 306
BLAST of EWM28443.1 vs. NCBI_GenBank
Match: gi|653047700|ref|WP_027299298.1| (acyl-CoA synthetase [Rhodospirillales bacterium URHD0088]) HSP 1 Score: 205.297 bits (521), Expect = 3.581e-60 Identity = 104/182 (57.14%), Postives = 130/182 (71.43%), Query Frame = 0
Query: 4 ALNILKEEGASLPLVVDIVDKHYLGKGKRLGEWEFEAFLQEGDEAFDLEGPEDEMAAISLSYTSGTTGDPKGVVTHHRGAYLNSLANIVSWGTGMPLHTVFLHVVPMFHCNGWCFPWAITALAGTHVCTRWVRADLLYEAMAKYNVSHFCGAPILMNLLLSASQEHKRDLLGRNIQLMTAGA 185
AL ++K + PLVVDI D G +GE ++E F+ EGD F P+DE AI+L+YTSGTTG+PKGVV HHRGAYLN+L NI+ W MP H V+L +PMFHCNGWCFPW ITALAGTH+C R V A +Y A+A+ V+H CGAPI+MN+LL+A E KR+ +GR I +MTAGA
Sbjct: 132 ALTLVK----TRPLVVDI-DDALAPPGALIGECDYERFIAEGDADFAWSNPDDEWDAIALNYTSGTTGNPKGVVYHHRGAYLNALGNILVWS--MPSHPVYLWTLPMFHCNGWCFPWTITALAGTHICLRRVEAGAIYAAIAEEKVTHLCGAPIVMNMLLNAPPEAKRE-IGRAIHMMTAGA 305
BLAST of EWM28443.1 vs. NCBI_GenBank
Match: gi|1113605038|gb|OJY64158.1| (acyl-CoA synthetase [Rhodospirillales bacterium 70-18]) HSP 1 Score: 204.527 bits (519), Expect = 7.273e-60 Identity = 105/186 (56.45%), Postives = 132/186 (70.97%), Query Frame = 0
Query: 1 MEAALNILKEEGASLPLVVDIVDKHYLGKGKRLGEWEFEAFLQEGDEAFDLEGPEDEMAAISLSYTSGTTGDPKGVVTHHRGAYLNSLANIVSWGTGMPLHTVFLHVVPMFHCNGWCFPWAITALAGTHVCTRWVRADLLYEAMAKYNVSHFCGAPILMNLLLSASQEHKRDLLGRNIQLMTAGAP 186
M+AAL ++ E G PLV+DI D GK +G ++EAFL GD F P DE AI+L+YTSGTTG+PKGVV HHRGAYLN++ N+++WG MP H V+L +PMFHCNGWCFPW ITA+AGTHVC R V A + A+A + V+H CGAPI++N+LL+A DL GR IQ+MTAGAP
Sbjct: 129 MQAALAMMPEGGR--PLVIDI-DDALAPPGKLIGAMDYEAFLAGGDPGFTWRLPPDEWGAIALNYTSGTTGNPKGVVYHHRGAYLNAMGNVLTWG--MPPHAVYLWTLPMFHCNGWCFPWTITAIAGTHVCLRRVEAAAVLAAIAAHGVTHMCGAPIVVNMLLNAPAGQWPDLQGRTIQMMTAGAP 309
BLAST of EWM28443.1 vs. NCBI_GenBank
Match: gi|118439077|gb|EAV45709.1| (acyl-CoA synthase [Stappia aggregata IAM 12614]) HSP 1 Score: 203.756 bits (517), Expect = 1.536e-59 Identity = 94/175 (53.71%), Postives = 125/175 (71.43%), Query Frame = 0
Query: 12 GASLPLVVDIVDKHYLGKGKRLGEWEFEAFLQEGDEAFDLEGPEDEMAAISLSYTSGTTGDPKGVVTHHRGAYLNSLANIVSWGTGMPLHTVFLHVVPMFHCNGWCFPWAITALAGTHVCTRWVRADLLYEAMAKYNVSHFCGAPILMNLLLSASQEHKRDLLGRNIQLMTAGAP 186
A P+V+D D + G+RLG ++EAFLQ GD F P+DE AI+L+YTSGTTG+PKGVV HHRGAYL + AN+++ M H V+L +PMFHCNGWCFPW+++ +AGTHVC RWVR ++E +A+ V+H CGAPI+M+ LL+A+ EHKRD L R ++ TA AP
Sbjct: 142 AAVTPIVIDFSDTQFPQDGERLGSLDYEAFLQSGDPEFAWSLPDDEWDAIALNYTSGTTGNPKGVVYHHRGAYLLAQANVIT--ASMAKHPVYLWTLPMFHCNGWCFPWSLSLVAGTHVCLRWVRPQTMWELIAEEGVTHLCGAPIIMSTLLNAAPEHKRD-LDREVEFFTAAAP 313
BLAST of EWM28443.1 vs. NCBI_GenBank
Match: gi|750134975|ref|WP_040439053.1| (acyl-CoA synthetase [Labrenzia aggregata]) HSP 1 Score: 203.756 bits (517), Expect = 1.557e-59 Identity = 94/175 (53.71%), Postives = 125/175 (71.43%), Query Frame = 0
Query: 12 GASLPLVVDIVDKHYLGKGKRLGEWEFEAFLQEGDEAFDLEGPEDEMAAISLSYTSGTTGDPKGVVTHHRGAYLNSLANIVSWGTGMPLHTVFLHVVPMFHCNGWCFPWAITALAGTHVCTRWVRADLLYEAMAKYNVSHFCGAPILMNLLLSASQEHKRDLLGRNIQLMTAGAP 186
A P+V+D D + G+RLG ++EAFLQ GD F P+DE AI+L+YTSGTTG+PKGVV HHRGAYL + AN+++ M H V+L +PMFHCNGWCFPW+++ +AGTHVC RWVR ++E +A+ V+H CGAPI+M+ LL+A+ EHKRD L R ++ TA AP
Sbjct: 140 AAVTPIVIDFSDTQFPQDGERLGSLDYEAFLQSGDPEFAWSLPDDEWDAIALNYTSGTTGNPKGVVYHHRGAYLLAQANVIT--ASMAKHPVYLWTLPMFHCNGWCFPWSLSLVAGTHVCLRWVRPQTMWELIAEEGVTHLCGAPIIMSTLLNAAPEHKRD-LDREVEFFTAAAP 311
BLAST of EWM28443.1 vs. NCBI_GenBank
Match: gi|821555659|ref|WP_046862671.1| (acyl-CoA synthetase [Microvirga massiliensis]) HSP 1 Score: 203.371 bits (516), Expect = 2.994e-59 Identity = 97/171 (56.73%), Postives = 125/171 (73.10%), Query Frame = 0
Query: 16 PLVVDIVDKHYLGKGKRLGEWEFEAFLQEGDEAFDLEGPEDEMAAISLSYTSGTTGDPKGVVTHHRGAYLNSLANIVSWGTGMPLHTVFLHVVPMFHCNGWCFPWAITALAGTHVCTRWVRADLLYEAMAKYNVSHFCGAPILMNLLLSASQEHKRDLLGRNIQLMTAGAP 186
PLV+D D + G G+RLGE E+EAFL EGD AF P+DE AI+L+YTSGTTGDPKGVV HHRGAYL ++ N+V+ GM H V+L +PMFHCNGWCFPW+I+ +AGTHVC R VRA +++A+A + V+H CGAPI+M+ LL+A + KR L ++ TA AP
Sbjct: 159 PLVIDYDDPEFSGPGERLGEIEYEAFLAEGDPAFAWNAPQDEWDAITLNYTSGTTGDPKGVVYHHRGAYLLAMGNVVT--CGMDKHPVYLWTLPMFHCNGWCFPWSISIVAGTHVCLRQVRAKAMFDAIADHGVTHLCGAPIVMSTLLNAPEADKRP-LPHIVKFFTAAAP 326 The following BLAST results are available for this feature:
BLAST of EWM28443.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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