EWM28447.1, cds2226 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM28447.1 vs. NCBI_GenBank
Match: gi|585110849|gb|EWM28447.1| (hypothetical protein Naga_100627g1 [Nannochloropsis gaditana]) HSP 1 Score: 259.61 bits (662), Expect = 9.740e-88 Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 0 Query: 1 MQLKANDPSAPRLFDAVREGDPRAVATLQQMFADRYLGGVDLDAFQDNEWIEKARARFFANEDLLRLVDDNDILDILRNPDLKLHKASEMGNADPSRLLNSLMESHARNHGGVKRKGPATEGGEKEGL 128 MQLKANDPSAPRLFDAVREGDPRAVATLQQMFADRYLGGVDLDAFQDNEWIEKARARFFANEDLLRLVDDNDILDILRNPDLKLHKASEMGNADPSRLLNSLMESHARNHGGVKRKGPATEGGEKEGL Sbjct: 1 MQLKANDPSAPRLFDAVREGDPRAVATLQQMFADRYLGGVDLDAFQDNEWIEKARARFFANEDLLRLVDDNDILDILRNPDLKLHKASEMGNADPSRLLNSLMESHARNHGGVKRKGPATEGGEKEGL 128
BLAST of EWM28447.1 vs. NCBI_GenBank
Match: gi|585100446|gb|EWM20647.1| (hypothetical protein Naga_100289g4 [Nannochloropsis gaditana]) HSP 1 Score: 119.013 bits (297), Expect = 2.844e-31 Identity = 56/105 (53.33%), Postives = 77/105 (73.33%), Query Frame = 0 Query: 3 LKANDPSAPRLFDAVREGDPRAVATLQQMFADRYLGGVDLDAFQDNEWIEKARARFFANEDLLRLVDDNDILDILRNPDLKLHKASEMGNADPSRLLNSLMESHA 107 LKAND S+P L + + G PRA+ATLQQ F D+YLGG+DL+ FQ+ +W+++AR FFA+E+LLR V D +L LRNP+L+ K SE ADP+R+L+SL + A Sbjct: 95 LKANDASSPELVASAKRGSPRAIATLQQKFVDQYLGGIDLETFQNPQWVDRARDNFFADENLLRAVGDESVLSNLRNPNLRPLKVSEYEEADPARILSSLTGNQA 199
BLAST of EWM28447.1 vs. NCBI_GenBank
Match: gi|553185284|ref|XP_005854226.1| (hypothetical protein NGA_0223401 [Nannochloropsis gaditana CCMP526] >gi|553189756|ref|XP_005855066.1| hypothetical protein NGA_0223402 [Nannochloropsis gaditana CCMP526] >gi|422293989|gb|EKU21289.1| hypothetical protein NGA_0223402 [Nannochloropsis gaditana CCMP526] >gi|422294833|gb|EKU22133.1| hypothetical protein NGA_0223401 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 113.62 bits (283), Expect = 3.267e-28 Identity = 56/105 (53.33%), Postives = 75/105 (71.43%), Query Frame = 0 Query: 3 LKANDPSAPRLFDAVREGDPRAVATLQQMFADRYLGGVDLDAFQDNEWIEKARARFFANEDLLRLVDDNDILDILRNPDLKLHKASEMGNADPSRLLNSLMESHA 107 LKAND S+P L + + G PRA+ATLQQ F D+YLGG+DL+ FQ W+++AR FFA+E+LLR V D +L LRNP+L+ K SE ADP+R+L+SL + A Sbjct: 193 LKANDASSPELVASAKRGSPRAIATLQQKFVDQYLGGIDLETFQ---WVDRARDNFFADENLLRAVGDESVLSNLRNPNLRPLKVSEYEEADPARILSSLTGNQA 294 The following BLAST results are available for this feature:
BLAST of EWM28447.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 3
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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