EWM28450.1, cds2224 (CDS) Nannochloropsis gaditana

Overview
NameEWM28450.1
Unique Namecds2224
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:1223188..1223940 +
Alignment locationCM002458.1:1224221..1224310 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM28450.1
Productaspartyl asparaginyl beta-hydroxylase
Orig transcript idgnl|cribi|Naga_100627g2.10711.mrna
GbkeyCDS
Noteencoded by transcript variant 2; alternatively spliced
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:1223188..1223940 +
CM002458.1supercontigCM002458.1:1224221..1224310 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
GO:0018193peptidyl-amino acid modification
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Vocabulary: INTERPRO
TermDefinition
IPR007803Asp_Arg_Pro-Hydrxlase
IPR027443IPNS-like
Homology
BLAST of EWM28450.1 vs. NCBI_GenBank
Match: gi|585110852|gb|EWM28450.1| (aspartyl asparaginyl beta-hydroxylase [Nannochloropsis gaditana])

HSP 1 Score: 575.859 bits (1483), Expect = 0.000e+0
Identity = 280/280 (100.00%), Postives = 280/280 (100.00%), Query Frame = 0
Query:    1 MICSLDLPRWPAVNLTTCIFLCLISIVTLYDTLRALPSPRASPFQPGRWDWHSYILKGQIQPLFAELCPETSRLLQEFNRQSFLMRDTPFSFSFFSTLHGQSVIAPHTGPSNLRLRCHLPLIVPQGGKTEANEEKKEGMKEGRREGRREGEKGGSEEGRERGNQGEGLQSAAGKDSSQSRPDPVPPGCASSSAEFDSLATLQARLPCGIRIGDQVREWVEGKCLVFDDAYEHEVWNLTEEERVLLLVDFWHPEIALEEREAIQKMFEFAARQGWMQGNGG 280
            MICSLDLPRWPAVNLTTCIFLCLISIVTLYDTLRALPSPRASPFQPGRWDWHSYILKGQIQPLFAELCPETSRLLQEFNRQSFLMRDTPFSFSFFSTLHGQSVIAPHTGPSNLRLRCHLPLIVPQGGKTEANEEKKEGMKEGRREGRREGEKGGSEEGRERGNQGEGLQSAAGKDSSQSRPDPVPPGCASSSAEFDSLATLQARLPCGIRIGDQVREWVEGKCLVFDDAYEHEVWNLTEEERVLLLVDFWHPEIALEEREAIQKMFEFAARQGWMQGNGG
Sbjct:    1 MICSLDLPRWPAVNLTTCIFLCLISIVTLYDTLRALPSPRASPFQPGRWDWHSYILKGQIQPLFAELCPETSRLLQEFNRQSFLMRDTPFSFSFFSTLHGQSVIAPHTGPSNLRLRCHLPLIVPQGGKTEANEEKKEGMKEGRREGRREGEKGGSEEGRERGNQGEGLQSAAGKDSSQSRPDPVPPGCASSSAEFDSLATLQARLPCGIRIGDQVREWVEGKCLVFDDAYEHEVWNLTEEERVLLLVDFWHPEIALEEREAIQKMFEFAARQGWMQGNGG 280          
BLAST of EWM28450.1 vs. NCBI_GenBank
Match: gi|585110851|gb|EWM28449.1| (aspartyl asparaginyl beta-hydroxylase [Nannochloropsis gaditana])

HSP 1 Score: 485.723 bits (1249), Expect = 2.269e-171
Identity = 234/234 (100.00%), Postives = 234/234 (100.00%), Query Frame = 0
Query:   47 GRWDWHSYILKGQIQPLFAELCPETSRLLQEFNRQSFLMRDTPFSFSFFSTLHGQSVIAPHTGPSNLRLRCHLPLIVPQGGKTEANEEKKEGMKEGRREGRREGEKGGSEEGRERGNQGEGLQSAAGKDSSQSRPDPVPPGCASSSAEFDSLATLQARLPCGIRIGDQVREWVEGKCLVFDDAYEHEVWNLTEEERVLLLVDFWHPEIALEEREAIQKMFEFAARQGWMQGNGG 280
            GRWDWHSYILKGQIQPLFAELCPETSRLLQEFNRQSFLMRDTPFSFSFFSTLHGQSVIAPHTGPSNLRLRCHLPLIVPQGGKTEANEEKKEGMKEGRREGRREGEKGGSEEGRERGNQGEGLQSAAGKDSSQSRPDPVPPGCASSSAEFDSLATLQARLPCGIRIGDQVREWVEGKCLVFDDAYEHEVWNLTEEERVLLLVDFWHPEIALEEREAIQKMFEFAARQGWMQGNGG
Sbjct:  101 GRWDWHSYILKGQIQPLFAELCPETSRLLQEFNRQSFLMRDTPFSFSFFSTLHGQSVIAPHTGPSNLRLRCHLPLIVPQGGKTEANEEKKEGMKEGRREGRREGEKGGSEEGRERGNQGEGLQSAAGKDSSQSRPDPVPPGCASSSAEFDSLATLQARLPCGIRIGDQVREWVEGKCLVFDDAYEHEVWNLTEEERVLLLVDFWHPEIALEEREAIQKMFEFAARQGWMQGNGG 334          
BLAST of EWM28450.1 vs. NCBI_GenBank
Match: gi|397621506|gb|EJK66325.1| (hypothetical protein THAOC_12761 [Thalassiosira oceanica])

HSP 1 Score: 125.176 bits (313), Expect = 1.146e-28
Identity = 83/222 (37.39%), Postives = 105/222 (47.30%), Query Frame = 0
Query:   54 YILKGQIQPLFAELCPETSRLLQEFNRQSFLMRDTPFSFSFFSTLHGQSVIAPHTGPSNLRLRCHLPLIVPQGGKTEANEEKKEGMKEGRREGRREGEKGGSEEGRERGNQGEGLQSAAGKDSSQSRPDPVPPGCASSSAEFDSLATLQARLPCGIRIGDQVREWVEGKCLVFDDAYEHEVWNLTEEERVLLLVDFWHPEIALEEREAIQKMFEFAARQGWM 275
            Y   G     F + CP T+ ++ +  ++  L +   FSFSFFSTLHG S I PHTGP NLRLR HLPLIVP+                                            S + +DS+++RP                LA        GIR+ DQ RE+ EG  LV DD+Y HEVWN  +  RVL L D WHP++ LEERE I  MF +A  QGW+
Sbjct:  150 YTSNGDKNNEFQDRCPVTAAVVDDLEKEGLLFKSP-FSFSFFSTLHGNSSIQPHTGPMNLRLRVHLPLIVPK--------------------------------------------STSAEDSNRNRP----------------LA--------GIRVADQTREFREGSALVLDDSYVHEVWNEGDSPRVLFLFDLWHPDVHLEERERINNMFSYAKDQGWI 302          
BLAST of EWM28450.1 vs. NCBI_GenBank
Match: gi|299115781|emb|CBN74346.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 112.849 bits (281), Expect = 1.232e-26
Identity = 48/71 (67.61%), Postives = 58/71 (81.69%), Query Frame = 0
Query:  207 CGIRIGDQVREWVEGKCLVFDDAYEHEVWNLTEEERVLLLVDFWHPEIALEEREAIQKMFEFAARQGWMQG 277
            CG+R+G ++R W EGKCLVFDD YEHEVWN TE ERVLLL D WHP++A EER A+  MF +AARQGW++G
Sbjct:  143 CGMRVGGEIRPWEEGKCLVFDDCYEHEVWNKTERERVLLLFDLWHPDLAGEERNAVTDMFGYAARQGWLRG 213          

HSP 2 Score: 101.679 bits (252), Expect = 2.548e-22
Identity = 49/87 (56.32%), Postives = 57/87 (65.52%), Query Frame = 0
Query:   44 FQPGRWDWHSYILKGQIQPLFAELCPETSRLLQEFNRQSFLMRDTPFSFSFFSTLHGQSVIAPHTGPSNLRLRCHLPLIVPQGGKTE 130
               G+WDWHSY+LKG+ Q +F + CP T+ LL         M  TPFSFSFFSTLHG S IA HT P NLRLRCHLPL VP    ++
Sbjct:   59 LHSGQWDWHSYVLKGRRQEVFRQHCPLTASLLDSVADH---MVGTPFSFSFFSTLHGGSSIAAHTAPCNLRLRCHLPLTVPSADPSQ 142          
BLAST of EWM28450.1 vs. NCBI_GenBank
Match: gi|219117570|ref|XP_002179578.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217408631|gb|EEC48564.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 103.605 bits (257), Expect = 2.596e-22
Identity = 46/92 (50.00%), Postives = 61/92 (66.30%), Query Frame = 0
Query:   47 GRWDWHSYILKGQIQPLFAELCPETSRLLQEFNRQSFLMRDTPFSFSFFSTLHGQSVIAPHTGPSNLRLRCHLPLIVPQGGKTEANEEKKEG 138
            G WDWHSY+LKG++QP F +  P T+ +LQ F  +  L   TPF ++FFSTLH QS IA H+ P N R+R HLPLIVP    + A   +++G
Sbjct:  135 GTWDWHSYMLKGKVQPNFEKHFPRTATILQVFRDEGLLFEGTPFGYAFFSTLHAQSKIAAHSAPMNFRVRIHLPLIVPANMPSAAPVSEQDG 226          

HSP 2 Score: 95.1301 bits (235), Expect = 2.715e-19
Identity = 41/74 (55.41%), Postives = 51/74 (68.92%), Query Frame = 0
Query:  204 RLPCGIRIGDQVREWVEGKCLVFDDAYEHEVWNLTEEERVLLLVDFWHPEIALEEREAIQKMFEFAARQGWMQG 277
            R   GIR+G  VR+W  GK LV DDAY HEVWN T E RVLLL+D WHP+I  +E++ I  +F+ A  QGW+ G
Sbjct:  227 RPSVGIRVGPVVRQWHPGKALVLDDAYNHEVWNHTHESRVLLLIDLWHPDITTQEKQDIIGLFKHAEEQGWLSG 300          
BLAST of EWM28450.1 vs. NCBI_GenBank
Match: gi|1210530679|dbj|GAX10630.1| (aspartate beta-hydroxylase [Fistulifera solaris])

HSP 1 Score: 100.523 bits (249), Expect = 3.038e-21
Identity = 44/71 (61.97%), Postives = 52/71 (73.24%), Query Frame = 0
Query:  204 RLPCGIRIGDQVREWVEGKCLVFDDAYEHEVWNLTEEERVLLLVDFWHPEIALEEREAIQKMFEFAARQGW 274
            R  CGIR+G   R W EGK LV DD+YEHEVWN T E RVLLLVD WHP+I L+ER+ I  +F+ A +QGW
Sbjct:  214 RPACGIRVGPVTRTWQEGKALVLDDSYEHEVWNDTAETRVLLLVDLWHPDITLQERKEIVALFDHAQQQGW 284          

HSP 2 Score: 95.9005 bits (237), Expect = 1.151e-19
Identity = 43/79 (54.43%), Postives = 53/79 (67.09%), Query Frame = 0
Query:   47 GRWDWHSYILKGQIQPLFAELCPETSRLLQEFNRQSFLMRDTPFSFSFFSTLHGQSVIAPHTGPSNLRLRCHLPLIVPQ 125
            G+WDWHS++ KGQIQ  FA+  P T+ LL +   +  L   TPF ++FFSTLH  S IA HT P N RLR HLPL VP+
Sbjct:  123 GQWDWHSFVQKGQIQSAFAQQFPVTASLLVQLKHEGMLFTGTPFGYAFFSTLHASSKIAAHTAPMNFRLRVHLPLQVPK 201          
BLAST of EWM28450.1 vs. NCBI_GenBank
Match: gi|1210518639|dbj|GAX22515.1| (aspartate beta-hydroxylase [Fistulifera solaris])

HSP 1 Score: 98.2117 bits (243), Expect = 1.342e-20
Identity = 47/96 (48.96%), Postives = 60/96 (62.50%), Query Frame = 0
Query:   47 GRWDWHSYILKGQIQPLFAELCPETSRLLQEFNRQSFLMRDTPFSFSFFSTLHGQSVIAPHTGPSNLRLRCHLPLIVPQGGKTEANEEKKEGMKEG 142
            G+WDWHS++ KGQIQ  FA+  P T+ LL + N +  L   TPF ++FFSTLH  S IA HT P N RLR HLPL VP+   +   E    G++ G
Sbjct:  115 GQWDWHSFVQKGQIQSAFAQHFPMTASLLLQLNHEGLLFTGTPFGYAFFSTLHASSKIAAHTAPMNFRLRVHLPLQVPE-HTSSTTERPACGIRVG 209          

HSP 2 Score: 97.0561 bits (240), Expect = 4.599e-20
Identity = 41/71 (57.75%), Postives = 51/71 (71.83%), Query Frame = 0
Query:  204 RLPCGIRIGDQVREWVEGKCLVFDDAYEHEVWNLTEEERVLLLVDFWHPEIALEEREAIQKMFEFAARQGW 274
            R  CGIR+G   R W EGK LV DD+YEHEVWN T  +RV+LLVD WHP++ L ER+ I  +F+ A +QGW
Sbjct:  201 RPACGIRVGPLTRTWHEGKALVLDDSYEHEVWNETSSQRVVLLVDLWHPDVTLVERKEIVALFDHAQQQGW 271          
BLAST of EWM28450.1 vs. NCBI_GenBank
Match: gi|673039701|ref|XP_008873811.1| (hypothetical protein H310_09498 [Aphanomyces invadans] >gi|574470592|gb|ETV97602.1| hypothetical protein H310_09498 [Aphanomyces invadans])

HSP 1 Score: 94.7449 bits (234), Expect = 1.540e-19
Identity = 39/71 (54.93%), Postives = 55/71 (77.46%), Query Frame = 0
Query:  207 CGIRIGDQVREWVEGKCLVFDDAYEHEVWNLTEE-ERVLLLVDFWHPEIALEEREAIQKMFEFAARQGWMQ 276
            CGIR+GDQ+R W EG+CL+ DD+Y+HEVW+  ++ ERV+LL DFWHP++  EER+A+  MF  A  +GW+ 
Sbjct:  165 CGIRVGDQIRTWKEGECLILDDSYDHEVWHDGKKGERVVLLFDFWHPDLVPEERDALIDMFAEAKTKGWLS 235          

HSP 2 Score: 75.8702 bits (185), Expect = 1.325e-12
Identity = 38/82 (46.34%), Postives = 47/82 (57.32%), Query Frame = 0
Query:   47 GRWDWHSYILKGQI--QPLFAELCPETSRLLQEFNRQSFLMRDTPFSFSFFSTLHGQSVIAPHTGPSNLRLRCHLPLIVPQG 126
            G+WDW SY+ KG       F E CP T+ LL   N     M   PF+++FFS+L   S I  H+ P N+RLRCH PL VP G
Sbjct:   86 GQWDWFSYMTKGNKTGNDAFEEHCPTTTSLL---NSIPGFMTSIPFAYTFFSSLQPGSSIKAHSAPCNIRLRCHFPLFVPPG 164          
BLAST of EWM28450.1 vs. NCBI_GenBank
Match: gi|695439513|ref|XP_009532729.1| (aspartylasparaginylbeta-hydroxylase-like protein [Phytophthora sojae] >gi|348672576|gb|EGZ12396.1| aspartylasparaginylbeta-hydroxylase-like protein [Phytophthora sojae])

HSP 1 Score: 93.9745 bits (232), Expect = 2.613e-19
Identity = 42/71 (59.15%), Postives = 55/71 (77.46%), Query Frame = 0
Query:  207 CGIRIGDQVREWVEGKCLVFDDAYEHEVW-NLTEEERVLLLVDFWHPEIALEEREAIQKMFEFAARQGWMQ 276
            CGIR+GD+ R+W EGK LV DDA++HEVW N  E +RVLLL DFWHP++   EREAI +MF+ A  +GW++
Sbjct:  157 CGIRVGDETRQWEEGKALVLDDAFDHEVWHNGKEGDRVLLLFDFWHPDLVQGEREAITEMFKEAKEKGWLK 227          

HSP 2 Score: 69.3218 bits (168), Expect = 2.094e-10
Identity = 34/91 (37.36%), Postives = 48/91 (52.75%), Query Frame = 0
Query:   47 GRWDWHSYILKGQIQPLFAELCPETSRLLQEFNRQSFLMRDTPFSFSFFSTLHGQSVIAPHTGPSNLRLRCHLPLIVPQGGKTEANEEKKE 137
            G+WDW SY+ +G+ Q  FA +                 M   PF++SFFS L  +S I  H+ P N+RLRCH PL VP+G      +E ++
Sbjct:   91 GQWDWLSYVTQGRRQADFASI--------------PGFMAGLPFTYSFFSVLKPESSIKAHSAPCNIRLRCHFPLFVPEGCGIRVGDETRQ 167          
BLAST of EWM28450.1 vs. NCBI_GenBank
Match: gi|1173958312|gb|OQS04692.1| (aspartyl/Asparaginyl beta-hydroxylase [Thraustotheca clavata])

HSP 1 Score: 95.5153 bits (236), Expect = 4.638e-19
Identity = 41/71 (57.75%), Postives = 54/71 (76.06%), Query Frame = 0
Query:  207 CGIRIGDQVREWVEGKCLVFDDAYEHEVWNL-TEEERVLLLVDFWHPEIALEEREAIQKMFEFAARQGWMQ 276
            CGIR+ DQ +EW EG+C+VFDDAY+HEVW+   + ERVLLL DFWHP++  EE+ A+  MF  A  +GW+Q
Sbjct:  293 CGIRVADQTKEWKEGECMVFDDAYDHEVWHDGAKGERVLLLFDFWHPDLIEEEKAALIDMFAQATDKGWLQ 363          

HSP 2 Score: 92.8189 bits (229), Expect = 4.574e-18
Identity = 45/96 (46.88%), Postives = 60/96 (62.50%), Query Frame = 0
Query:   47 GRWDWHSYILKGQIQPLFAELCPETSRLLQEFNRQSFLMRDTPFSFSFFSTLHGQSVIAPHTGPSNLRLRCHLPLIVPQGGKTEANEEKKEGMKEG 142
            G+WDW SY++KG+   LF + CP T++LL   N     M   PF+++FFSTL  QS I  H+ P N+RLRCH PL VP+G      ++ KE  KEG
Sbjct:  216 GQWDWFSYVIKGKKTSLFEQHCPTTTKLL---NDIPGFMTGLPFAYAFFSTLKPQSAIKAHSAPCNIRLRCHFPLFVPKGCGIRVADQTKE-WKEG 307          
The following BLAST results are available for this feature:
BLAST of EWM28450.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585110852|gb|EWM28450.1|0.000e+0100.00aspartyl asparaginyl beta-hydroxylase [Nannochloro... [more]
gi|585110851|gb|EWM28449.1|2.269e-171100.00aspartyl asparaginyl beta-hydroxylase [Nannochloro... [more]
gi|397621506|gb|EJK66325.1|1.146e-2837.39hypothetical protein THAOC_12761 [Thalassiosira oc... [more]
gi|299115781|emb|CBN74346.1|1.232e-2667.61conserved unknown protein [Ectocarpus siliculosus][more]
gi|219117570|ref|XP_002179578.1|2.596e-2250.00predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|1210530679|dbj|GAX10630.1|3.038e-2161.97aspartate beta-hydroxylase [Fistulifera solaris][more]
gi|1210518639|dbj|GAX22515.1|1.342e-2048.96aspartate beta-hydroxylase [Fistulifera solaris][more]
gi|673039701|ref|XP_008873811.1|1.540e-1954.93hypothetical protein H310_09498 [Aphanomyces invad... [more]
gi|695439513|ref|XP_009532729.1|2.613e-1959.15aspartylasparaginylbeta-hydroxylase-like protein [... [more]
gi|1173958312|gb|OQS04692.1|4.638e-1957.75aspartyl/Asparaginyl beta-hydroxylase [Thraustothe... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2232rna2232Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications