EWM28461.1, cds2212 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28461.1 vs. NCBI_GenBank
Match: gi|585110869|gb|EWM28461.1| (programmed cell death protein 5 [Nannochloropsis gaditana]) HSP 1 Score: 273.092 bits (697), Expect = 8.564e-93 Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0 Query: 1 MEPAGELDLPPGFTAAGAGMSGAGGRGMSTEEMEAQKAKHAEMEERRQFMLDQILSPEAKERLARIAIVRKEKVRGVQDMLIQAATSGRLRGKVSEEQLIEMLEQVSSQVDKKATKVTIQRRRCLDEDEDDNDDDML 137 MEPAGELDLPPGFTAAGAGMSGAGGRGMSTEEMEAQKAKHAEMEERRQFMLDQILSPEAKERLARIAIVRKEKVRGVQDMLIQAATSGRLRGKVSEEQLIEMLEQVSSQVDKKATKVTIQRRRCLDEDEDDNDDDML Sbjct: 1 MEPAGELDLPPGFTAAGAGMSGAGGRGMSTEEMEAQKAKHAEMEERRQFMLDQILSPEAKERLARIAIVRKEKVRGVQDMLIQAATSGRLRGKVSEEQLIEMLEQVSSQVDKKATKVTIQRRRCLDEDEDDNDDDML 137
BLAST of EWM28461.1 vs. NCBI_GenBank
Match: gi|645237762|ref|XP_008225358.1| (PREDICTED: DNA-binding protein DDB_G0278111 [Prunus mume]) HSP 1 Score: 110.153 bits (274), Expect = 1.929e-28 Identity = 60/115 (52.17%), Postives = 86/115 (74.78%), Query Frame = 0 Query: 16 AGAGMSGAGGRGMSTEEMEAQKAKHAEMEERRQFMLDQILSPEAKERLARIAIVRKEKVRGVQDMLIQAATSGRLRGKVSEEQLIEMLEQVSSQVDKKATKVTIQRRRCLDEDED 130 A G+ G+GG+ + EE A + E EERRQ ML QILS EA+ER+ARIA+V+ EK +GV+D++++AA G++ KVSEE+LI +LEQ+++Q K+ TKVTIQRRR + +D+D Sbjct: 19 AQHGVGGSGGKQQNPEEQRANEDAKREAEERRQMMLSQILSAEARERIARIALVKPEKAKGVEDVILRAAQMGQIAEKVSEERLISLLEQINNQTTKQ-TKVTIQRRRSVLDDDD 132
BLAST of EWM28461.1 vs. NCBI_GenBank
Match: gi|470114948|ref|XP_004293666.1| (PREDICTED: DNA-binding protein DDB_G0278111 isoform X2 [Fragaria vesca subsp. vesca]) HSP 1 Score: 108.997 bits (271), Expect = 5.107e-28 Identity = 64/111 (57.66%), Postives = 85/111 (76.58%), Query Frame = 0 Query: 22 GAGG-RGM-STEEMEAQKAKHAEMEERRQFMLDQILSPEAKERLARIAIVRKEKVRGVQDMLIQAATSGRLRGKVSEEQLIEMLEQVSSQVDKKATKVTIQRRRCLDEDED 130 GAGG RG +TE+ +A E EERRQ ML QILS EA+ERLARIA+V+ EK RGV+D++++AA G++ KVSEE+LI +LEQ+++Q K+ TKVTIQRRR + ED+D Sbjct: 22 GAGGARGQQNTEQQKANDDAKREAEERRQMMLSQILSSEARERLARIALVKPEKARGVEDVILRAAQMGQIAEKVSEERLISLLEQINNQTTKQ-TKVTIQRRRSVLEDDD 131
BLAST of EWM28461.1 vs. NCBI_GenBank
Match: gi|356512159|ref|XP_003524788.1| (PREDICTED: DNA-binding protein DDB_G0278111-like [Glycine max] >gi|947110105|gb|KRH58431.1| hypothetical protein GLYMA_05G127400 [Glycine max]) HSP 1 Score: 108.997 bits (271), Expect = 5.742e-28 Identity = 62/113 (54.87%), Postives = 85/113 (75.22%), Query Frame = 0 Query: 20 MSGAGGRG--MSTEEMEAQKAKHAEMEERRQFMLDQILSPEAKERLARIAIVRKEKVRGVQDMLIQAATSGRLRGKVSEEQLIEMLEQVSSQVDKKATKVTIQRRRCLDEDED 130 M+G GG G ++E+ +AQ E EERRQ ML QILS EA+ERLARIA+V+ EK RGV+D +++AA G++ KVSEE+LI +LEQ+++Q ++ TKVTIQRRR + ED+D Sbjct: 18 MAGHGGVGNQQNSEQEKAQDDAKREAEERRQMMLSQILSAEARERLARIALVKPEKARGVEDFILRAAQMGQITEKVSEERLISLLEQINNQTTRQ-TKVTIQRRRSVLEDDD 129
BLAST of EWM28461.1 vs. NCBI_GenBank
Match: gi|1139776723|gb|ONI10910.1| (hypothetical protein PRUPE_4G075200 [Prunus persica] >gi|1139776724|gb|ONI10911.1| hypothetical protein PRUPE_4G075200 [Prunus persica]) HSP 1 Score: 107.842 bits (268), Expect = 1.282e-27 Identity = 58/115 (50.43%), Postives = 85/115 (73.91%), Query Frame = 0 Query: 16 AGAGMSGAGGRGMSTEEMEAQKAKHAEMEERRQFMLDQILSPEAKERLARIAIVRKEKVRGVQDMLIQAATSGRLRGKVSEEQLIEMLEQVSSQVDKKATKVTIQRRRCLDEDED 130 A G+ G+GG+ + E+ A + E EERRQ ML QILS EA+ER+ARIA+V+ EK +GV+D++++AA G++ KVSEE+LI +LEQ+++Q K+ TKVTI RRR + +D+D Sbjct: 6 AQHGVGGSGGKQQNPEQQRANEDAKREAEERRQMMLSQILSAEARERIARIALVKPEKAKGVEDVILKAAQMGQIAEKVSEERLISLLEQINNQTTKQ-TKVTIHRRRSVLDDDD 119
BLAST of EWM28461.1 vs. NCBI_GenBank
Match: gi|947110106|gb|KRH58432.1| (hypothetical protein GLYMA_05G127400 [Glycine max]) HSP 1 Score: 107.071 bits (266), Expect = 1.943e-27 Identity = 59/112 (52.68%), Postives = 82/112 (73.21%), Query Frame = 0 Query: 19 GMSGAGGRGMSTEEMEAQKAKHAEMEERRQFMLDQILSPEAKERLARIAIVRKEKVRGVQDMLIQAATSGRLRGKVSEEQLIEMLEQVSSQVDKKATKVTIQRRRCLDEDED 130 G + G ++E+ +AQ E EERRQ ML QILS EA+ERLARIA+V+ EK RGV+D +++AA G++ KVSEE+LI +LEQ+++Q ++ TKVTIQRRR + ED+D Sbjct: 3 GFADLQGNQQNSEQEKAQDDAKREAEERRQMMLSQILSAEARERLARIALVKPEKARGVEDFILRAAQMGQITEKVSEERLISLLEQINNQTTRQ-TKVTIQRRRSVLEDDD 113
BLAST of EWM28461.1 vs. NCBI_GenBank
Match: gi|297740643|emb|CBI30825.3| (unnamed protein product, partial [Vitis vinifera]) HSP 1 Score: 107.071 bits (266), Expect = 2.036e-27 Identity = 59/106 (55.66%), Postives = 82/106 (77.36%), Query Frame = 0 Query: 25 GRGMSTEEMEAQKAKHAEMEERRQFMLDQILSPEAKERLARIAIVRKEKVRGVQDMLIQAATSGRLRGKVSEEQLIEMLEQVSSQVDKKATKVTIQRRRCLDEDED 130 G ++E+ +AQ+ E +ERRQ ML QILS EA+ERLARIA+V+ EK RGV+D+L++AA G++ KVSEE+LI +LEQ+++Q K+ TKVTIQRRR + ED+D Sbjct: 11 GNHQNSEQQKAQEDAKREADERRQMMLSQILSSEARERLARIALVKPEKARGVEDVLLRAAQMGQIVEKVSEERLISLLEQINNQTTKQ-TKVTIQRRRSVLEDDD 115
BLAST of EWM28461.1 vs. NCBI_GenBank
Match: gi|1147553202|ref|XP_020092499.1| (DNA-binding protein DDB_G0278111 isoform X1 [Ananas comosus] >gi|1147553204|ref|XP_020092507.1| DNA-binding protein DDB_G0278111 isoform X2 [Ananas comosus]) HSP 1 Score: 107.457 bits (267), Expect = 2.107e-27 Identity = 59/106 (55.66%), Postives = 82/106 (77.36%), Query Frame = 0 Query: 25 GRGMSTEEMEAQKAKHAEMEERRQFMLDQILSPEAKERLARIAIVRKEKVRGVQDMLIQAATSGRLRGKVSEEQLIEMLEQVSSQVDKKATKVTIQRRRCLDEDED 130 G +T + +AQ+ E EERRQ ML QILS EA+ERLARIA+V+ +K RGV+D+L++AA +G++ KVSEE+LI +LEQ+++Q K+ TKVTIQRRR + ED+D Sbjct: 24 GNQQNTGQQKAQEDAKREAEERRQMMLSQILSAEARERLARIALVKPDKARGVEDVLLRAAQTGQISEKVSEERLISLLEQINTQTSKQ-TKVTIQRRRSVLEDDD 128
BLAST of EWM28461.1 vs. NCBI_GenBank
Match: gi|947093719|gb|KRH42304.1| (hypothetical protein GLYMA_08G082100 [Glycine max]) HSP 1 Score: 107.457 bits (267), Expect = 2.201e-27 Identity = 60/110 (54.55%), Postives = 81/110 (73.64%), Query Frame = 0 Query: 21 SGAGGRGMSTEEMEAQKAKHAEMEERRQFMLDQILSPEAKERLARIAIVRKEKVRGVQDMLIQAATSGRLRGKVSEEQLIEMLEQVSSQVDKKATKVTIQRRRCLDEDED 130 S GG + E+ +AQ E EERRQ ML QILS EA+ERLARIA+V+ EK RGV+D +++AA G++ KVSEE+LI +LEQ+++Q ++ TKVTIQRRR + ED+D Sbjct: 20 SHGGGNQQNPEQEKAQDDAKREAEERRQMMLSQILSAEARERLARIALVKPEKARGVEDFILRAAQMGQITEKVSEERLISLLEQINNQTTRQ-TKVTIQRRRSVLEDDD 128
BLAST of EWM28461.1 vs. NCBI_GenBank
Match: gi|1162552450|ref|XP_020417745.1| (DNA-binding protein DDB_G0278111 [Prunus persica] >gi|1139776722|gb|ONI10909.1| hypothetical protein PRUPE_4G075200 [Prunus persica]) HSP 1 Score: 107.457 bits (267), Expect = 2.212e-27 Identity = 58/115 (50.43%), Postives = 85/115 (73.91%), Query Frame = 0 Query: 16 AGAGMSGAGGRGMSTEEMEAQKAKHAEMEERRQFMLDQILSPEAKERLARIAIVRKEKVRGVQDMLIQAATSGRLRGKVSEEQLIEMLEQVSSQVDKKATKVTIQRRRCLDEDED 130 A G+ G+GG+ + E+ A + E EERRQ ML QILS EA+ER+ARIA+V+ EK +GV+D++++AA G++ KVSEE+LI +LEQ+++Q K+ TKVTI RRR + +D+D Sbjct: 19 AQHGVGGSGGKQQNPEQQRANEDAKREAEERRQMMLSQILSAEARERIARIALVKPEKAKGVEDVILKAAQMGQIAEKVSEERLISLLEQINNQTTKQ-TKVTIHRRRSVLDDDD 132 The following BLAST results are available for this feature:
BLAST of EWM28461.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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