EWM28472.1, cds2209 (CDS) Nannochloropsis gaditana

Overview
NameEWM28472.1
Unique Namecds2209
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:1187028..1188487 -
Alignment locationCM002458.1:1186075..1186837 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM28472.1
ProductPolycystin cation channel, PKD1/PKD2
Orig transcript idgnl|cribi|Naga_100190g2.3123.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:1187028..1188487 -
CM002458.1supercontigCM002458.1:1186075..1186837 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0006810transport
Vocabulary: Molecular Function
TermDefinition
GO:0005215transporter activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR013122PKD1_2_channel
Homology
BLAST of EWM28472.1 vs. NCBI_GenBank
Match: gi|585110882|gb|EWM28472.1| (Polycystin cation channel, PKD1/PKD2 [Nannochloropsis gaditana])

HSP 1 Score: 1517.67 bits (3928), Expect = 0.000e+0
Identity = 740/740 (100.00%), Postives = 740/740 (100.00%), Query Frame = 0
Query:    1 MHPPYKKIPIRLDHGGNVLLSLCELTPMERWQGYGVFPTKVVLHVILLVLTTAAVLHDAARWSPYRLASQASACHFFAPAPCAAKMCGASPTVSYGWDNWSNCFIFSTDELYAAVRGVVYNYFHIEDIALANYGVMRMAAGEVDDSAGTSAINVDGHNAPRRTNHSEKLIPRPPLLTASLQSSTNDSEHHYHRQYPLTLADLGPLDTRKNTPAAVEDFVARLLTLAIDLELTDELAEDGANVCYLWHVRVLYDIRNKAEIAVSQKTYIRAFCDALPRKGGDQPGRMDGNRQVFQARRLIQGTQTFLGESLGSDGGRRQALFPFIHPLWTSTVHVDRQAYVLSAGILGISLWLVVFLLCELYGSCCILRRARALVGMGRRVSYQGLLPPGRTRSTDSLASLGSRSTAWKRGLDWDRDVHLSTKFHFVSFWQLLLLTGTLVSGIESLCALRHVGPLAPPMVTDVHAAWRGLGAACLWVYACRYMHHSDRLYAIVLVINHSVPRVARMLVQVVPLFVGYAWFGVMFFAPYLPRFGSFSQAFATLFCVWNGDGLMDVQGELGTWFPGLGFAYLSVFVGVFSYVVLNILLVVVQQTLVYVQVLGRGKRRLHRLLLRREGGKKPGGEGREGGDGDRDVVEEGASNKGRQSGGRHQGLDEEKDFLALLDLTHGQDATRAFFEGESGGRGGGGERRENKGERGTMWPEKGRADGCKGLRQRRGGRGEREGGKRTPAVNWDQHDAGSGV 740
            MHPPYKKIPIRLDHGGNVLLSLCELTPMERWQGYGVFPTKVVLHVILLVLTTAAVLHDAARWSPYRLASQASACHFFAPAPCAAKMCGASPTVSYGWDNWSNCFIFSTDELYAAVRGVVYNYFHIEDIALANYGVMRMAAGEVDDSAGTSAINVDGHNAPRRTNHSEKLIPRPPLLTASLQSSTNDSEHHYHRQYPLTLADLGPLDTRKNTPAAVEDFVARLLTLAIDLELTDELAEDGANVCYLWHVRVLYDIRNKAEIAVSQKTYIRAFCDALPRKGGDQPGRMDGNRQVFQARRLIQGTQTFLGESLGSDGGRRQALFPFIHPLWTSTVHVDRQAYVLSAGILGISLWLVVFLLCELYGSCCILRRARALVGMGRRVSYQGLLPPGRTRSTDSLASLGSRSTAWKRGLDWDRDVHLSTKFHFVSFWQLLLLTGTLVSGIESLCALRHVGPLAPPMVTDVHAAWRGLGAACLWVYACRYMHHSDRLYAIVLVINHSVPRVARMLVQVVPLFVGYAWFGVMFFAPYLPRFGSFSQAFATLFCVWNGDGLMDVQGELGTWFPGLGFAYLSVFVGVFSYVVLNILLVVVQQTLVYVQVLGRGKRRLHRLLLRREGGKKPGGEGREGGDGDRDVVEEGASNKGRQSGGRHQGLDEEKDFLALLDLTHGQDATRAFFEGESGGRGGGGERRENKGERGTMWPEKGRADGCKGLRQRRGGRGEREGGKRTPAVNWDQHDAGSGV
Sbjct:    1 MHPPYKKIPIRLDHGGNVLLSLCELTPMERWQGYGVFPTKVVLHVILLVLTTAAVLHDAARWSPYRLASQASACHFFAPAPCAAKMCGASPTVSYGWDNWSNCFIFSTDELYAAVRGVVYNYFHIEDIALANYGVMRMAAGEVDDSAGTSAINVDGHNAPRRTNHSEKLIPRPPLLTASLQSSTNDSEHHYHRQYPLTLADLGPLDTRKNTPAAVEDFVARLLTLAIDLELTDELAEDGANVCYLWHVRVLYDIRNKAEIAVSQKTYIRAFCDALPRKGGDQPGRMDGNRQVFQARRLIQGTQTFLGESLGSDGGRRQALFPFIHPLWTSTVHVDRQAYVLSAGILGISLWLVVFLLCELYGSCCILRRARALVGMGRRVSYQGLLPPGRTRSTDSLASLGSRSTAWKRGLDWDRDVHLSTKFHFVSFWQLLLLTGTLVSGIESLCALRHVGPLAPPMVTDVHAAWRGLGAACLWVYACRYMHHSDRLYAIVLVINHSVPRVARMLVQVVPLFVGYAWFGVMFFAPYLPRFGSFSQAFATLFCVWNGDGLMDVQGELGTWFPGLGFAYLSVFVGVFSYVVLNILLVVVQQTLVYVQVLGRGKRRLHRLLLRREGGKKPGGEGREGGDGDRDVVEEGASNKGRQSGGRHQGLDEEKDFLALLDLTHGQDATRAFFEGESGGRGGGGERRENKGERGTMWPEKGRADGCKGLRQRRGGRGEREGGKRTPAVNWDQHDAGSGV 740          
BLAST of EWM28472.1 vs. NCBI_GenBank
Match: gi|675194589|ref|XP_008906179.1| (hypothetical protein PPTG_12226 [Phytophthora parasitica INRA-310] >gi|675194591|ref|XP_008906180.1| hypothetical protein, variant 1 [Phytophthora parasitica INRA-310] >gi|568093640|gb|ETN08431.1| hypothetical protein PPTG_12226 [Phytophthora parasitica INRA-310] >gi|568093641|gb|ETN08432.1| hypothetical protein, variant 1 [Phytophthora parasitica INRA-310] >gi|570984629|gb|ETP44157.1| hypothetical protein F442_09200 [Phytophthora parasitica P10297] >gi|570984630|gb|ETP44158.1| hypothetical protein, variant 1 [Phytophthora parasitica P10297])

HSP 1 Score: 117.472 bits (293), Expect = 7.002e-24
Identity = 147/620 (23.71%), Postives = 244/620 (39.35%), Query Frame = 0
Query:   25 LTPMERWQGYGVFPTKVVLHVILLVLTTAAV-LHDAARWSPYRLASQASACHFFAPAPCAAKMCGASPTVSYGWDNWSNCFIFSTDELYAAVRGVVYNYFHIEDIALANYGVMRMAAGEVDDSAGTSAINVDGHNAPRRTNHSEKLIPRPPLLTASLQSSTNDSEHHYHRQYPLTLADLGPLDTRKNTPAAVEDFVARLLTLAIDLELTDELAEDGANVCYLWHVRVLYDIRNKAEIAVSQKTYIRAFCDALPRKGGDQPGRMDGNRQVFQARRLIQGTQTFLGESLGSDGGRRQALFPFIHPLWTSTVHVDRQAYV-LSAGILGISLWLVVFLLCELYGSCCILRRARALV--GMGRRVSYQGLLPPGRTRSTDSLASLGSRSTAWKRG----LDWDRDVHLSTKFHFVSFWQLLLLTGTLVSGIESLCALRHVGPLAPPMVTDVHAAWRGLGAACLWVYACRYMHHSDRLYAIVLVINHSVPRVARMLVQVVPLFVGYAWFGVMFFAPYLPRFGSFSQAFATLFCVWNGDGLMDVQGELGT-WFPGLGFAYLSVFVGVFSYVVLNILLVVVQQTLVYVQVLGRGKRRLHRLLLR-REGGKKPGGEGREGGDGDRDVVE 634
            L+P E+W  +G FP K++LH+ L++LT A + L+DA   + Y  AS  +   FF P P A    G  P     +        ++ +    AV  +   YF I + ++ANY  +R ++GEV        + VD            +++P   L T     S +D               +GP D   +       F + L  L     L D    +    C+ W V V +++   A+I V  +      C+ + R     P                                          P WT+     RQ++V +   +  +S+  ++  L  L  S  ++ RAR L+      R +    L    T + D     G  S  + R       W  ++  + K   ++  QL++ T  L+    ++ +L  +    P  +   H          LW     Y+ H+  +Y+IVL +    PRV + L+ V P+F GYA FG ++F   +  FG+ S +  +LF + NGD +MD    +    F   G  +L  F+ +F YVVLNI + +V++     Q     +RRL  LL   R  G     E     +  R +++
Sbjct:   38 LSPWEKWAAHGRFPYKLMLHIALVLLTFAQMQLYDAQN-AAYMRASHRNWAFFFLP-PAAD--IGVVPRFQRDF--------YTINRTMTAVHFLRDAYFSIGNDSVANYEYLRTSSGEVQ----PLKLIVD------------RVLPHGDLETREYLVSQDDES-------------VGPFDPAMSLWQKKHLFRS-LRALKFSFPLRDHQFGNFYEECFEWQVNVKFEVIESAQIHVELED-----CE-VSRCASTHP-----------------------------------------RPFWTTA----RQSFVWMHVVVAVVSILYIMLSLKALRRSFQVMARARGLLRDNAKDRENLDNGLHNVTTNAKD-----GDNSHRYIRQHVPLRSWT-EIPFTLKLKLMNELQLIVFTSLLLLLASTMWSLLFLEAHMP--IRFWHRLLHATALLLLWSSLVGYLEHNQHIYSIVLTLKWGTPRVLQFLLGVFPIFFGYALFGTIYFGNKIEEFGTLSASMISLFSLMNGDIIMDTFDAMELHQFTVSGKVFLYSFISLFMYVVLNIFIAIVEEAFFATQ---STRRRLSDLLSDPRVSGVNAAKESDISAEMMRSLLQ 553          
BLAST of EWM28472.1 vs. NCBI_GenBank
Match: gi|566023414|gb|ETI46325.1| (hypothetical protein F443_09276 [Phytophthora parasitica P1569] >gi|566023415|gb|ETI46326.1| hypothetical protein, variant 1 [Phytophthora parasitica P1569] >gi|567960710|gb|ETK86259.1| hypothetical protein L915_09096 [Phytophthora parasitica] >gi|567960711|gb|ETK86260.1| hypothetical protein, variant 1 [Phytophthora parasitica] >gi|567989425|gb|ETL39683.1| hypothetical protein L916_09008 [Phytophthora parasitica] >gi|567989426|gb|ETL39684.1| hypothetical protein, variant 1 [Phytophthora parasitica] >gi|568018633|gb|ETL92802.1| hypothetical protein L917_08941 [Phytophthora parasitica] >gi|568018634|gb|ETL92803.1| hypothetical protein, variant 1 [Phytophthora parasitica] >gi|568049089|gb|ETM46104.1| hypothetical protein L914_08961 [Phytophthora parasitica] >gi|568049090|gb|ETM46105.1| hypothetical protein, variant 1 [Phytophthora parasitica] >gi|570327025|gb|ETO74973.1| hypothetical protein F444_09361 [Phytophthora parasitica P1976] >gi|570327026|gb|ETO74974.1| hypothetical protein, variant 1 [Phytophthora parasitica P1976] >gi|570950875|gb|ETP16132.1| hypothetical protein F441_09235 [Phytophthora parasitica CJ01A1] >gi|570950876|gb|ETP16133.1| hypothetical protein, variant 1 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 116.316 bits (290), Expect = 1.629e-23
Identity = 147/620 (23.71%), Postives = 244/620 (39.35%), Query Frame = 0
Query:   25 LTPMERWQGYGVFPTKVVLHVILLVLTTAAV-LHDAARWSPYRLASQASACHFFAPAPCAAKMCGASPTVSYGWDNWSNCFIFSTDELYAAVRGVVYNYFHIEDIALANYGVMRMAAGEVDDSAGTSAINVDGHNAPRRTNHSEKLIPRPPLLTASLQSSTNDSEHHYHRQYPLTLADLGPLDTRKNTPAAVEDFVARLLTLAIDLELTDELAEDGANVCYLWHVRVLYDIRNKAEIAVSQKTYIRAFCDALPRKGGDQPGRMDGNRQVFQARRLIQGTQTFLGESLGSDGGRRQALFPFIHPLWTSTVHVDRQAYV-LSAGILGISLWLVVFLLCELYGSCCILRRARALV--GMGRRVSYQGLLPPGRTRSTDSLASLGSRSTAWKRG----LDWDRDVHLSTKFHFVSFWQLLLLTGTLVSGIESLCALRHVGPLAPPMVTDVHAAWRGLGAACLWVYACRYMHHSDRLYAIVLVINHSVPRVARMLVQVVPLFVGYAWFGVMFFAPYLPRFGSFSQAFATLFCVWNGDGLMDVQGELGT-WFPGLGFAYLSVFVGVFSYVVLNILLVVVQQTLVYVQVLGRGKRRLHRLLLR-REGGKKPGGEGREGGDGDRDVVE 634
            L+P E+W  +G FP K++LH+ L++LT A + L+DA   + Y  AS  +   FF P P A    G  P     +        ++ +    AV  +   YF I + ++ANY  +R ++GEV        + VD            +++P   L T     S +D               +GP D   +       F + L  L     L D    +    C+ W V V +++   A+I V  +      C+ + R     P                                          P WT+     RQ++V +   +  +S+  ++  L  L  S  ++ RAR L+      R +    L    T + D     G  S  + R       W  ++  + K   ++  QL++ T  L+    ++ +L  +    P  +   H          LW     Y+ H+  +Y+IVL +    PRV + L+ V P+F GYA FG ++F   +  FG+ S +  +LF + NGD +MD    +    F   G  +L  F+ +F YVVLNI + +V++     Q     +RRL  LL   R  G     E     +  R +++
Sbjct:   38 LSPWEKWAAHGRFPYKLMLHIALVLLTFAQMQLYDAQN-AAYMRASHRNWAFFFLP-PAAD--IGVVPRFQRDF--------YTINRTMTAVHFLRDAYFSIGNDSVANYEYLRTSSGEVQ----PLKLIVD------------RVLPHGDLETREYLVSQDDES-------------VGPFDPAMSLWQKKHLFRS-LRALKFSFPLRDHQFGNFYEECFEWQVNVKFEVIESAQIHVELED-----CE-VSRCASTHP-----------------------------------------RPFWTTA----RQSFVWMHVVVAVVSILYMMLSLKALRRSFQVMARARGLLRDNAKDRENLDNGLHNVTTNAKD-----GDNSHRYIRQHVPLRSWT-EIPFTLKLKLMNELQLIVFTSLLLLLASTMWSLLFLEAHMP--IRFWHRLLHATALLLLWSSLVGYLEHNQHIYSIVLTLKWGTPRVLQFLLGVFPIFFGYALFGTIYFGNKIEEFGTLSASMISLFSLMNGDIIMDTFDAMELHQFTVSGKVFLYSFISLFMYVVLNIFIAIVEEAFFATQ---STRRRLSDLLSDPRVSGVNAAKESDISAEMMRSLLQ 553          
BLAST of EWM28472.1 vs. NCBI_GenBank
Match: gi|1173944709|gb|OQR93411.1| (mucolipin-like protein [Achlya hypogyna])

HSP 1 Score: 115.931 bits (289), Expect = 1.882e-23
Identity = 149/623 (23.92%), Postives = 236/623 (37.88%), Query Frame = 0
Query:    9 PIRLDHGGNVLLSLCELTPMERWQGYGVFPTKVVLHVILLVLTTAAVLHDAARWSPYRLASQASACHFFAPAPCAAKMCGASPTVSYGWDNWSNCFIFSTDELYAAVRGVVYNYFHIEDIALANYGVMRMAAGEVDDSAGTSAINVDGHNAPRRTNHSEKLIPRPPLLTASLQSSTNDSEHHYHRQYPLTLADLGPLDTRKNTPAAVEDFVARLLTLAIDLELTDELAEDGANVCYLWHVRVLYDIRNKAEIAVSQKTYIRAFCDALPRKGGDQPGRMDGNRQVFQARRLIQGTQTFLGESLGSDGGRRQALFPFIHPLWTSTVHVDRQAYV-LSAGILGISLWLVVFLLCELYGSCCILRRARALVGMGRRVSYQGLLPPGRTRSTDSLASLGSRSTAWKRGLDWDRDVHLSTKFHFVSFWQLLLLTGTLVSGIESLCALRHVGPLAPPMVTDVHAAWRGLGAACLWVYACRYMHHSDRLYAIVLVINHSVPRVARMLVQVVPLFVGYAWFGVMFFAPYLPRFGSFSQAFATLFCVWNGDGLMDVQGELGTWFPGLGFAYLSVFVGVFSYVVLNILLVVVQQTLVYVQVLGRGKRRLHRLLLRREGGKKPGGEGREGGDGDR 630
            P  + H   +LLS     P E+W  +G FP K++ HV+L++   A +    A+ S Y  AS  +  +FF P+          P++    +   +  ++S +   AA++ V   Y+ I   ++ANY    M A                 + P         +P    +T  L+  T  +      +Y LT   LGPLD    TP  V  F   L  +   L L D         C+ W V +  D     +I  S   Y+ A           +P  +                         S+G            LW +     R  Y+ L+  IL I    VV+L+  +      L R+  +    +R +++ L  P       S                W  DV L+ K  F     L +    ++  + S+  +       P  +++ H   + LG   L      Y+ H+   Y+IVL +   +P+V   L  V P+F GYA FG + F   +  FG   Q+  TLF + NGD ++D    L   FP LG AYL  F+ +F Y+VLNI + +V+++    +   R    L + L     G     + R   D  R
Sbjct:   21 PAEMPHLHRILLS-----PWEKWARHGRFPWKLLCHVLLVICCMAQIFVYDAQNSAYIRASYRNWVYFFLPS---------GPSMLAPDEYRFHEPLYSINASIAAIQNVRDAYYAIAGRSVANYEYHYMDAWN---------------STP---------VPIAVAVTQVLRGETTVT------RYNLTATSLGPLDN-ATTPMDVAAFFHTLSRMEFHLRLRDMDYGPLYFDCFDWDVHIAVD-----KIHASHLRYVAAHTGLTSHSMMIEPSHL---------------------HICSSEG------------LWKAI----RHRYLWLNVVILVIG---VVYLVLSVKS----LMRSVQMFAKAKRFAHEALAHPEDAGLLQS----------------W-HDVPLAIKLQFFKTQYLFISAAIVLVSLNSVWNISRAIAFVP--LSESHRVVQALGPLLLCATLVGYLEHNPHFYSIVLTLRWGIPKVLYFLTGVSPIFFGYAVFGSIAFGDRVDGFGGLQQSCITLFSIMNGDIILDSFDALKADFPILGAAYLYSFIALFIYIVLNIFIAIVEESYFATRSYKRALDVLSQGLF---AGDSNAQQQRLTADAFR 527          
BLAST of EWM28472.1 vs. NCBI_GenBank
Match: gi|970637455|gb|KUF81475.1| (Mucolipin-1 [Phytophthora nicotianae])

HSP 1 Score: 105.145 bits (261), Expect = 5.879e-20
Identity = 141/620 (22.74%), Postives = 238/620 (38.39%), Query Frame = 0
Query:   25 LTPMERWQGYGVFPTKVVLHVILLVLTTAAV-LHDAARWSPYRLASQASACHFFAPAPCAAKMCGASPTVSYGWDNWSNCFIFSTDELYAAVRGVVYNYFHIEDIALANYGVMRMAAGEVDDSAGTSAINVDGHNAPRRTNHSEKLIPRPPLLTASLQSSTNDSEHHYHRQYPLTLADLGPLDTRKNTPAAVEDFVARLLTLAIDLELTDELAEDGANVCYLWHVRVLYDIRNKAEIAVSQKTYIRAFCDALPRKGGDQPGRMDGNRQVFQARRLIQGTQTFLGESLGSDGGRRQALFPFIHPLWTSTVHVDRQAYV-LSAGILGISLWLVVFLLCELYGSCCILRRARALV--GMGRRVSYQGLLPPGRTRSTDSLASLGSRSTAWKRG----LDWDRDVHLSTKFHFVSFWQLLLLTGTLVSGIESLCALRHVGPLAPPMVTDVHAAWRGLGAACLWVYACRYMHHSDRLYAIVLVINHSVPRVARMLVQVVPLFVGYAWFGVMFFAPYLPRFGSFSQAFATLFCVWNGDGLMDVQGELGT-WFPGLGFAYLSVFVGVFSYVVLNILLVVVQQTLVYVQVLGRGKRRLHRLLLR-REGGKKPGGEGREGGDGDRDVVE 634
            L+P E+W  +G FP K++LH+ L++LT A + L+DA        A+   A H         + C       +          ++ +    AV  +   YF I + ++ANY  +R ++GEV        + VD            +++P   L T     S +D               +GP D   +       F + L  L     L D    +    C+ W V V +++   A+I V  +      C+ + R     P                                          P WT+     RQ++V +   +  +S+  ++  L  L  S  ++ RAR L+      R +    L    T + D     G  S  + R       W  ++  + K   ++  QL++ T  L+    ++ +L  +    P  +   H          LW     Y+ H+  +Y+IVL +    PRV + L+ V P+F GYA FG ++F   +  FG+ S +  +LF + NGD +MD    +    F   G  +L  F+ +F YVVLNI + +V++     Q     +RRL  LL   R  G     E     +  R +++
Sbjct:   38 LSPWEKWAAHGRFPYKLMLHIALVLLTFAQMQLYDAQN------AAYMRASH---------RNCRPRFQRDF----------YTINRTMTAVHFLRDAYFSIGNDSVANYEYLRTSSGEVQ----PLKLIVD------------RVLPHGDLETREYLVSQDDES-------------VGPFDPAMSLWQKKHLFRS-LRALKFSFPLRDHQFGNFYEECFEWQVNVKFEVIESAQIHVELED-----CE-VSRCASTHP-----------------------------------------RPFWTTA----RQSFVWMHVVVAVVSILYMMLSLKALRRSFQVMARARGLLRDNAKDRENLDNGLHNVTTNAKD-----GDNSHRYIRQHVPLRSWT-EIPFTLKLKLMNELQLIVFTSLLLLLASTMWSLLFLEAHMP--IRFWHRLLHATALLLLWSSLVGYLEHNQHIYSIVLTLKWGTPRVLQFLLGVFPIFFGYALFGTIYFGNKIEEFGTLSASMISLFSLMNGDIIMDTFDAMELHQFTVSGKVFLYSFISLFMYVVLNIFIAIVEEAFFATQ---STRRRLSDLLSDPRVSGVNAAKESDISAEMMRSLLQ 540          
BLAST of EWM28472.1 vs. NCBI_GenBank
Match: gi|635363130|emb|CCI48273.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 98.2117 bits (243), Expect = 1.158e-19
Identity = 56/159 (35.22%), Postives = 82/159 (51.57%), Query Frame = 0
Query:  453 PLAPPMVTDVHAAWRGLGAACLWVYACRYMHHSDRLYAIVLVINHSVPRVARMLVQVVPLFVGYAWFGVMFFAPYLPRFGSFSQAFATLFCVWNGDGLMDVQGELGTW-FPGLGFAYLSVFVGVFSYVVLNILLVVVQQTLVYVQVLGRGKRRLHRLLL 610
            PL  P     H    G G   LW+    Y+ H+  LY+IVL +  ++PRV + L+ V PLF GY  FG ++F   +  FG+ + +  TLF V NGD ++D    L +  F  +G  YL  F+ +  YVVLNI + +V++         R  RR   +LL
Sbjct:    8 PLQYP-----HRLLYGSGILSLWITIVGYLEHNSYLYSIVLTLRWAIPRVTKFLIGVFPLFFGYTLFGTIYFGSQVEEFGTITSSMVTLFAVMNGDVVLDTFETLSSHSFNIIGNIYLFSFIALSIYVVLNIFIALVEEAF----FASRASRRSLDVLL 157          
BLAST of EWM28472.1 vs. NCBI_GenBank
Match: gi|673050369|ref|XP_008879145.1| (hypothetical protein H310_13428 [Aphanomyces invadans] >gi|673050377|ref|XP_008879149.1| hypothetical protein, variant 1 [Aphanomyces invadans] >gi|574465141|gb|ETV92181.1| hypothetical protein H310_13428 [Aphanomyces invadans] >gi|574465142|gb|ETV92182.1| hypothetical protein, variant 1 [Aphanomyces invadans])

HSP 1 Score: 101.293 bits (251), Expect = 9.478e-19
Identity = 54/130 (41.54%), Postives = 73/130 (56.15%), Query Frame = 0
Query:  463 HAAWRGLGAACLWVYACRYMHHSDRLYAIVLVINHSVPRVARMLVQVVPLFVGYAWFGVMFFAPYLPRFGSFSQAFATLFCVWNGDGLMDVQGELGTWFPGLGFAYLSVFVGVFSYVVLNILLVVVQQTL 592
            H   + LG   LW     Y+ H+ R Y+IVL +  SVP+V   LV V P+F GYA FG + F   +  FG   QA  TLF + NGD ++D    L   FP +G AYL  F+ +F YVVLNI + +V++  
Sbjct:  339 HRFIQALGPLLLWSTFVGYLEHNPRFYSIVLTLRASVPKVVGFLVGVSPVFFGYALFGSIVFGYRVDGFGGIPQACVTLFAILNGDVILDTFASLHADFPFVGAAYLYSFIALFIYVVLNIFIAIVEEAF 468          
BLAST of EWM28472.1 vs. NCBI_GenBank
Match: gi|669147536|ref|XP_008609330.1| (hypothetical protein SDRG_05394 [Saprolegnia diclina VS20] >gi|530738926|gb|EQC37168.1| hypothetical protein SDRG_05394 [Saprolegnia diclina VS20])

HSP 1 Score: 99.7525 bits (247), Expect = 3.571e-18
Identity = 73/247 (29.55%), Postives = 115/247 (46.56%), Query Frame = 0
Query:  350 LWLVVFLLC----ELYGSCCILRRARALVGMGRRVSYQGL-LPPGRTRSTDSLASLGSRSTAWKRGLDWDRDVHLSTKFHFVSFWQLLLLTGTLVSGIESLCALRHVGPLAPPMVTDVHAAWRGLGAACLWVYACRYMHHSDRLYAIVLVINHSVPRVARMLVQVVPLFVGYAWFGVMFFAPYLPRFGSFSQAFATLFCVWNGDGLMDVQGELGTWFPGLGFAYLSVFVGVFSYVVLNILLVVVQQT 591
            LWL V +L      L  S   LRR+  +    +R +++ L +     R    L S             W  +V L+ K  F     + +    ++ G+ S+  +       P  V++ H A + LG   L      Y+ H+   Y+IVL +   +P+V   L  V P+F GYA FG + F   +  FG  +Q+  TLF + NGD ++D    L   FP LG AYL  F+ +F Y+VLNI + +V+++
Sbjct:  258 LWLNVVILVIGVVYLVLSIKSLRRSIHMFAKAKRFAHEALHVESDEARGRHLLQS-------------W-HEVPLAIKLQFFKTQYIFIALAIVLVGLNSVWNISKAVAYVP--VSEPHRAVQALGPLLLCATCVGYLEHNPHFYSIVLTLRWGIPKVLYFLTGVSPIFFGYAVFGSIVFGDRVDGFGGLAQSCITLFSIMNGDIILDSFDALKLDFPILGAAYLYSFIALFIYIVLNIFIAIVEES 488          
BLAST of EWM28472.1 vs. NCBI_GenBank
Match: gi|569400158|gb|ETO20486.1| (hypothetical protein RFI_16731 [Reticulomyxa filosa])

HSP 1 Score: 97.0561 bits (240), Expect = 5.893e-18
Identity = 64/191 (33.51%), Postives = 95/191 (49.74%), Query Frame = 0
Query:  402 SRSTAWKRGLDWDRDVHLSTKFHFVSFWQLLLLTGTLVSGIESLCALRHVGPLAPPMVTDVHAAWRGLGAACLWVYACRYMHHSDRLYAIVLVINHSVPRVARMLVQVVPLFVGYAWFGVMFFAPYLPRFGSFSQAFATLFCVWNGDGLMDVQGELGTWFPGLGFAYLSVFVGVFSYVVLNILLVVVQQTL 592
            SR   W R L W RD     K  F + W  +   G + S I S+  +R +      +  D    + G+G   LW+   +Y+      Y ++L +  S PRV   +V V+P+F+G+A FGV +FA     F S  QA  TLF + NGD + DV  E+ +  P +   YL VF+ +F Y VLNI + +V+   
Sbjct:  165 SRREEW-RNLSW-RD-----KLEFFNVWFFVTSIGNIASIIGSMWCVRLLLFETKTINLDPPFFFVGIGCMFLWISLVQYLEQFPHYYFLILTLKTSSPRVLAFVVGVLPIFIGFACFGVAYFASSSSMFSSIDQAAVTLFSLLNGDSIHDVFAEVYSSSPVISRFYLYVFIALFIYAVLNIFIAIVEDAF 348          
BLAST of EWM28472.1 vs. NCBI_GenBank
Match: gi|698806588|ref|XP_009836323.1| (hypothetical protein H257_11169 [Aphanomyces astaci] >gi|574108710|gb|ETV74216.1| hypothetical protein H257_11169 [Aphanomyces astaci])

HSP 1 Score: 98.2117 bits (243), Expect = 8.342e-18
Identity = 53/128 (41.41%), Postives = 73/128 (57.03%), Query Frame = 0
Query:  463 HAAWRGLGAACLWVYACRYMHHSDRLYAIVLVINHSVPRVARMLVQVVPLFVGYAWFGVMFFAPYLPRFGSFSQAFATLFCVWNGDGLMDVQGELGTWFPGLGFAYLSVFVGVFSYVVLNILLVVVQQ 590
            H   + LG   LW     Y+  + R Y+IVL +  S+P+V   LV V P+F GYA FG + F   +  FG   +A  TLF + NGD ++D    L T FP LG AYL  F+ +F YVVLNI + +V++
Sbjct:  347 HRFVQALGPLLLWTTFVGYLEPNRRFYSIVLTLGRSLPKVLGFLVGVSPVFFGYALFGSIVFGYRVQGFGGIQEACVTLFSILNGDVILDTFASLQTDFPFLGAAYLYTFIALFIYVVLNIFVAIVEE 474          
The following BLAST results are available for this feature:
BLAST of EWM28472.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585110882|gb|EWM28472.1|0.000e+0100.00Polycystin cation channel, PKD1/PKD2 [Nannochlorop... [more]
gi|675194589|ref|XP_008906179.1|7.002e-2423.71hypothetical protein PPTG_12226 [Phytophthora para... [more]
gi|566023414|gb|ETI46325.1|1.629e-2323.71hypothetical protein F443_09276 [Phytophthora para... [more]
gi|1173944709|gb|OQR93411.1|1.882e-2323.92mucolipin-like protein [Achlya hypogyna][more]
gi|970637455|gb|KUF81475.1|5.879e-2022.74Mucolipin-1 [Phytophthora nicotianae][more]
gi|635363130|emb|CCI48273.1|1.158e-1935.22unnamed protein product [Albugo candida][more]
gi|673050369|ref|XP_008879145.1|9.478e-1941.54hypothetical protein H310_13428 [Aphanomyces invad... [more]
gi|669147536|ref|XP_008609330.1|3.571e-1829.55hypothetical protein SDRG_05394 [Saprolegnia dicli... [more]
gi|569400158|gb|ETO20486.1|5.893e-1833.51hypothetical protein RFI_16731 [Reticulomyxa filos... [more]
gi|698806588|ref|XP_009836323.1|8.342e-1841.41hypothetical protein H257_11169 [Aphanomyces astac... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2217rna2217Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications