EWM28480.1, cds2193 (CDS) Nannochloropsis gaditana

Overview
NameEWM28480.1
Unique Namecds2193
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:1150095..1151612 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM28480.1
ProductImportin-beta
Orig transcript idgnl|cribi|Naga_100592g1.8444.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:1150095..1151612 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0006810transport
GO:0006886intracellular protein transport
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0005488binding
GO:0008536Ran GTPase binding
Vocabulary: INTERPRO
TermDefinition
IPR016024ARM-type_fold
IPR011989ARM-like
IPR001494Importin-beta_N
Homology
BLAST of EWM28480.1 vs. NCBI_GenBank
Match: gi|585110895|gb|EWM28480.1| (Importin-beta [Nannochloropsis gaditana])

HSP 1 Score: 1041.95 bits (2693), Expect = 0.000e+0
Identity = 505/505 (100.00%), Postives = 505/505 (100.00%), Query Frame = 0
Query:    1 MQPPQSSADTGPHTNLPCNLGPEHVPDLYRTLLSALDTANSTAREKAEGALRRFETVPCFLDALAVIIQAPEADIRREARLLAVLCINNVVRRHWRNNNTRNGSQNPRVGGTRLETHVQERFGGSGGRETNNSTSHSPHAVYLREQQLEARTVSDEEKKRTRTFLIYHMCERDDVVAKNLAHVLAKVVRADWPRQWPDFFQQLLSLHPFHGSGAISKNNNFHQQDDLQTLRVIQTLYRVIKELAGKGLLADKAAFQSMARSLFPVVHRELWLPRLHRLVAFLEQGDYGEHVLRRARVVKTLSKTLCYLSVQHAGVLERDSLESFFFHAYSAFGPLLTAEKGLLAPFATASSPAATLPAPLSDLLIALAKITKNLSYTVSETQQRSPSSLSSATLSLFLHLFFEHVCSTASCPSEPVLAALVWDPGLESCSRKFYLNACAFLGNCLSCPDYQSGEHHVMLSLPPTKDLMDLFRTFPFLFSIQLVVPRTKEACGWPPISSPRSVSCS 505
            MQPPQSSADTGPHTNLPCNLGPEHVPDLYRTLLSALDTANSTAREKAEGALRRFETVPCFLDALAVIIQAPEADIRREARLLAVLCINNVVRRHWRNNNTRNGSQNPRVGGTRLETHVQERFGGSGGRETNNSTSHSPHAVYLREQQLEARTVSDEEKKRTRTFLIYHMCERDDVVAKNLAHVLAKVVRADWPRQWPDFFQQLLSLHPFHGSGAISKNNNFHQQDDLQTLRVIQTLYRVIKELAGKGLLADKAAFQSMARSLFPVVHRELWLPRLHRLVAFLEQGDYGEHVLRRARVVKTLSKTLCYLSVQHAGVLERDSLESFFFHAYSAFGPLLTAEKGLLAPFATASSPAATLPAPLSDLLIALAKITKNLSYTVSETQQRSPSSLSSATLSLFLHLFFEHVCSTASCPSEPVLAALVWDPGLESCSRKFYLNACAFLGNCLSCPDYQSGEHHVMLSLPPTKDLMDLFRTFPFLFSIQLVVPRTKEACGWPPISSPRSVSCS
Sbjct:    1 MQPPQSSADTGPHTNLPCNLGPEHVPDLYRTLLSALDTANSTAREKAEGALRRFETVPCFLDALAVIIQAPEADIRREARLLAVLCINNVVRRHWRNNNTRNGSQNPRVGGTRLETHVQERFGGSGGRETNNSTSHSPHAVYLREQQLEARTVSDEEKKRTRTFLIYHMCERDDVVAKNLAHVLAKVVRADWPRQWPDFFQQLLSLHPFHGSGAISKNNNFHQQDDLQTLRVIQTLYRVIKELAGKGLLADKAAFQSMARSLFPVVHRELWLPRLHRLVAFLEQGDYGEHVLRRARVVKTLSKTLCYLSVQHAGVLERDSLESFFFHAYSAFGPLLTAEKGLLAPFATASSPAATLPAPLSDLLIALAKITKNLSYTVSETQQRSPSSLSSATLSLFLHLFFEHVCSTASCPSEPVLAALVWDPGLESCSRKFYLNACAFLGNCLSCPDYQSGEHHVMLSLPPTKDLMDLFRTFPFLFSIQLVVPRTKEACGWPPISSPRSVSCS 505          
BLAST of EWM28480.1 vs. NCBI_GenBank
Match: gi|673032818|ref|XP_008870370.1| (hypothetical protein H310_06922 [Aphanomyces invadans] >gi|574474370|gb|ETW01372.1| hypothetical protein H310_06922 [Aphanomyces invadans])

HSP 1 Score: 84.3445 bits (207), Expect = 4.836e-14
Identity = 97/416 (23.32%), Postives = 159/416 (38.22%), Query Frame = 0
Query:   14 TNLPCNLGPEHVPDLYRTLLSALDTANSTAREKAEGALRRFETVPCFLDALAVIIQAPEADIRREARLLAVLCINNVVRRHWRNNNTRNGSQNPRVGGTRLETHVQERFGGSGGRETNNSTSHSPHAVYLREQQLEARTVSDEEKKRTRTFLIYHMCERDDVVAKNLAHVLAKVVRADWPRQWPDFFQQLLSLHPFHGSGAISKNNNFHQQDDLQTLRVIQTLYRVIKELAGKGLLADKAAFQSMARSLFPVVHRELWLPRLHRLVAFLEQGDYGEHVLRRARVVKTLSKTLCYLSVQHAGVLERDSLESFFFHAYSAFGPLLTAEKGLLAPFATASSPAATLPAPLSDLLIALAKITKNLSYTVSETQQRSPSSLSSATLSLFLHLFFEHVCSTASCPSEPVLAALVWDPGLESC 429
            T+LP  LG  H  D+  T+  AL  + S  R   E  L++   +P F      ++   +  ++   RL+A L + N V   W                            G G R+                       +S EEK   R  L+ HM E +  +A  LA  +A++ R+D+P++WPD F  L               +N  Q   +Q  R ++ L  V+KELA + L+A +  F  M+ ++ P +   +W  ++  L +     D  ++VL       + +K L +L V    VL    +  F F  Y                F   +S   +LP P +  + +L KI  + +  V   Q+  P     A L  FL LF+  +      P + V+  L +   +  C
Sbjct:    3 TSLPPILGLGHAQDIITTMEQAL-CSQSDVRAAGEATLQQCMKIPGFAQLCLQVLNEAQFPLQPPVRLMAALSLKNAVSASWV---------------------------GRGSRQ---------------------YVISAEEKDEIRRGLLRHMEESNTAIATQLAVTVARIARSDFPKEWPDLFSLL--------------RDNIQQGSHVQQTRALRVLKSVVKELASRRLMAHRVIFNEMSVAVTPFL-AAVWKAQVTELSS--GNLDVVDNVL-------STTKVLHHLVVHGFKVLMPLDVIPFIFSNY-------------FETFRALTSYIHSLP-PDAPGIESLQKIRVSCAGLVVAVQKAHPIEF-RAYLGYFLQLFYAELTHPTPSPDKLVVHLLSYFTNVVGC 330          
BLAST of EWM28480.1 vs. NCBI_GenBank
Match: gi|669153920|ref|XP_008612522.1| (hypothetical protein SDRG_08413 [Saprolegnia diclina VS20] >gi|530735968|gb|EQC34210.1| hypothetical protein SDRG_08413 [Saprolegnia diclina VS20])

HSP 1 Score: 85.8853 bits (211), Expect = 5.321e-14
Identity = 83/332 (25.00%), Postives = 126/332 (37.95%), Query Frame = 0
Query:   15 NLPCNLGPEHVPDLYRTLLSALDTANSTAREKAEGALRRFETVPCFLDALAVIIQAPEADIRREARLLAVLCINNVVRRHWRNNNTRNGSQNPRVGGTRLETHVQERFGGSGGRETNNSTSHSPHAVYLREQQLEARTVSDEEKKRTRTFLIYHMCERDDVVAKNLAHVLAKVVRADWPRQWPDFFQQLLSLHPFHGSGAISKNNNFHQQDDLQTLRVIQTLYRVIKELAGKGLLADKAAFQSMARSLFPVVHRELWLPRLHRLVAFLEQGDYGEHVLRRARVVKTLS----KTLCYLSVQHAGVLERDSLESFFFHAYSAFGPLLTAEKGL 342
            N+P  LGP HV D+  T+  AL +     R   E  L++   +P F      +++ P  D     RL+A L + N V   W    +R                                                  T+S EEK + R  L+ H  E +  VA  LA  +A++ R+D+P++WPD F  L  L                Q   LQ +R ++ L  V+KELA + L+  +  F  M+  + P +  +LW  ++ +L    E  D    +L   +V+  L     K L  L V H            F + Y  F  LL   +GL
Sbjct:    2 NVPAALGPSHVGDVVATMEQAL-SPYEEVRVVGEATLQQCMKLPGFACLCLEVLKQPVGD---ATRLMAALSLKNAVASSWITRGSRQF------------------------------------------------TISAEEKLQVRRGLLQHTEETNKAVATQLAVTIARIARSDFPKEWPDLFGVLRDL--------------IQQGSPLQQMRALRVLKSVVKELATRRLMPQRVVFNEMSVVVSPFI-AQLWHSQVQQLQNATEMDDVLTKLLLSTKVLHHLVFYGFKALVPLDVVH----------FIFTNFYQTFQALLAFTQGL 256          
BLAST of EWM28480.1 vs. NCBI_GenBank
Match: gi|813118575|ref|XP_012195996.1| (hypothetical protein SPRG_02049, partial [Saprolegnia parasitica CBS 223.65] >gi|641539430|gb|KDO33239.1| hypothetical protein SPRG_02049, partial [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 85.8853 bits (211), Expect = 6.518e-14
Identity = 80/328 (24.39%), Postives = 125/328 (38.11%), Query Frame = 0
Query:   15 NLPCNLGPEHVPDLYRTLLSALDTANSTAREKAEGALRRFETVPCFLDALAVIIQAPEADIRREARLLAVLCINNVVRRHWRNNNTRNGSQNPRVGGTRLETHVQERFGGSGGRETNNSTSHSPHAVYLREQQLEARTVSDEEKKRTRTFLIYHMCERDDVVAKNLAHVLAKVVRADWPRQWPDFFQQLLSLHPFHGSGAISKNNNFHQQDDLQTLRVIQTLYRVIKELAGKGLLADKAAFQSMARSLFPVVHRELWLPRLHRLVAFLEQGDYGEHVLRRARVVKTLSKTLCYLSVQHAGVLERDSLESFFFHAYSAFGPLLTAEKGL 342
            N+P  LGP HV D+  T+  AL +     R   E  L++   +P F      +++ P  D     RL+A L + N V   W    +R                                                   +S EEK + R  L+ H  E +  VA  LA  +A++ R+D+P++WPD F  L  L                Q   LQ +R ++ L  V+KELA + L+  +  F  M+  + P +  +LW    HR V  L+     E VL +  +   +   L +   +   ++  D +   F + Y  F  LL    GL
Sbjct:    2 NVPAALGPSHVSDVVATMEQAL-SPYEEVRVAGEATLQQCMKLPGFACLCLEVLKQPVGD---ATRLMAALSLKNAVASSWITRGSRQF------------------------------------------------MISAEEKLQVRRGLLQHTEETNKAVATQLAVTIARIARSDFPKEWPDLFGILRDL--------------IQQGSPLQQMRALRVLKSVVKELATRRLMPQRVVFNEMSVVVCPFI-AQLW----HRQVQQLQNATEMEDVLTKLLLSTKVLHHLVFYGFK--ALVPLDVVPFIFTNFYQTFQALLAFTHGL 256          
BLAST of EWM28480.1 vs. NCBI_GenBank
Match: gi|1173952538|gb|OQS00200.1| (importin [Thraustotheca clavata])

HSP 1 Score: 85.5001 bits (210), Expect = 7.173e-14
Identity = 98/460 (21.30%), Postives = 171/460 (37.17%), Query Frame = 0
Query:   15 NLPCNLGPEHVPDLYRTLLSALDTANSTAREKAEGALRRFETVPCFLDALAVIIQAPEADIRREARLLAVLCINNVVRRHWRNNNTRNGSQNPRVGGTRLETHVQERFGGSGGRETNNSTSHSPHAVYLREQQLEARTVSDEEKKRTRTFLIYHMCERDDVVAKNLAHVLAKVVRADWPRQWPDFFQQLLSLHPFHGSGAISKNNNFHQQDDLQTLRVIQTLYRVIKELAGKGLLADKAAFQSMARSLFPVVHRELWLPRLHRLVAFLEQGDYGEHVLRRARVVKTLSKTLCYLSVQHAGVLERDSLESFFFHAYSAFGPLLTAEKGLLAPFATASSPAATLPAPLSDLLIALAKITKNLSYTVSETQQRSPSSLSSATLSLFLHLFFEHVCSTASCPSEPVLAALVWDPGLESCSRKFYLNACAFLGNCLSCPDYQ-----SGEHHVMLSLPPTKDLMD 469
            N+P  LG  HV D+  T+  AL + +   R   E  L++   +P F     + ++     +    RL+A L + N V   W    +R                                                  T+S+EEK++ R  L+  + E +  VA  +A  +A++ R+D+P++WPD F  L               N+  Q   L     ++ L  V+KELA + LLA +  F  M+ ++ P V   LW  +++ L A  +Q +    +       K L   + +       ++  D +   F + +  F  LL   K LL P + +   +  +   L+ L++A+              Q+  P       L  FL LF+  +    +CP                   K  +N  ++L N + C  YQ     +G    +++   + DL D
Sbjct:    2 NVPAVLGRGHVRDVIMTMEQAL-SMHPEVRSSGEATLQQCMKLPGFA---CLCLEILGEGVNDATRLMAALSLKNTVTSSWITRGSRQF------------------------------------------------TISNEEKQQVRVGLLQRIEESNKAVATQIAVTIARIARSDFPKEWPDLFGVL--------------RNHIQQGSPLNQSCALRVLKSVVKELASRRLLAHRTIFNEMSAAVCPFVSH-LWQNQVNALKATTDQAEIESLLSSLVLSTKVLHHLVSH---GFKALICLDVIPFIFANFFQTFQGLLQFTKELLPPDSASIQLSYRVLIALTGLVVAV--------------QKEHPIEFRE-FLGPFLQLFYTMLTEQHNCPD------------------KLLINMISYLTNVMGCILYQNLPSMTGAQRSVITAAGSVDLTD 358          
BLAST of EWM28480.1 vs. NCBI_GenBank
Match: gi|698780319|ref|XP_009823203.1| (hypothetical protein H257_01609 [Aphanomyces astaci] >gi|574122864|gb|ETV88340.1| hypothetical protein H257_01609 [Aphanomyces astaci])

HSP 1 Score: 79.7221 bits (195), Expect = 4.746e-12
Identity = 99/416 (23.80%), Postives = 156/416 (37.50%), Query Frame = 0
Query:   14 TNLPCNLGPEHVPDLYRTLLSALDTANSTAREKAEGALRRFETVPCFLDALAVIIQAPEADIRREARLLAVLCINNVVRRHWRNNNTRNGSQNPRVGGTRLETHVQERFGGSGGRETNNSTSHSPHAVYLREQQLEARTVSDEEKKRTRTFLIYHMCERDDVVAKNLAHVLAKVVRADWPRQWPDFFQQLLSLHPFHGSGAISKNNNFHQQDDLQTLRVIQTLYRVIKELAGKGLLADKAAFQSMARSLFPVVHRELWLPRLHRLVAFLEQGDYGEHVLRRARVVKTLSKTLCYLSVQHAGVLERDSLESFFFHAYSAFGPLLTAEKGLLAPFATASSPAATLPAPLSDLLIALAKITKNLSYTVSETQQRSPSSLSSATLSLFLHLFFEHVCSTASCPSEPVLAALVWDPGLESC 429
            T+LP  LG  H  D+  T+  A+ + + T R   E  L+    +P F      ++   +  +    RL+  L + N V   W    TR                                                   +S EEK   R  L+ HM E    VA  LA  +A++ R+D+P+ WPD F  L               +N  Q   LQ  R ++ L  V+KELA + L++ +A F  M+ ++ P +   +W  +    VA L  G+  + VL     V + +K L +L +    VL    +  F F AY                F   ++  +TLP P +  +  L KI  +++  V   Q+  P     A L  FL  F+  +   A  P   V+  L +   +  C
Sbjct:    2 TSLPPALGAAHAQDIITTMEQAMFSQSDT-RAAGEATLQLCMKIPGFALLCLQLLNEAQYQLPAPIRLMVALSLKNAVSTSWVGRGTRQ------------------------------------------------YVISAEEKDNVRRGLLRHMDESSSAVATQLAVTIARIARSDFPKDWPDLFSVL--------------RDNIQQGTLLQQTRALRVLKSVVKELASRRLMSHRAIFNDMSVAVCPFL-ASVWKSQ----VAQLSAGN--QDVLGN---VLSTTKVLHHLVLHGFKVLVPLDVIPFVFSAY-------------FDTFRALTTYISTLP-PDTPGVDVLNKIRVSIAGLVVAVQKAHPIEF-RAYLGPFLTQFYTTLTDPAPSPDRLVVHLLSYLTNVVGC 329          
BLAST of EWM28480.1 vs. NCBI_GenBank
Match: gi|826350838|ref|XP_012519960.1| (PREDICTED: importin-11 [Propithecus coquereli])

HSP 1 Score: 78.9518 bits (193), Expect = 8.292e-12
Identity = 101/395 (25.57%), Postives = 151/395 (38.23%), Query Frame = 0
Query:   32 LLSALDTANSTAREKAEGALRRFETVPCFLDALAVIIQAPEADIRREARLLAVLCINNVVRRHWRNNNTRNGSQNPRVGGTRLETHVQERFGGSGGRETNNSTSHSPHAVYLREQQLEARTVSDEEKKRTRTFLIYHMCERDDVVAKNLAHVLAKVVRADWPRQWPDFFQQLLSLHPFHGSGAISKNNNFHQQDDLQTLRVIQTLYRVIKELAGKGLLADKAAFQSMARSLFPVVHRELWLPRLHRLVAFLEQGDYGEHVLRRARVVKTLSKTLCYLSV-------------QHAGVLERDSLESFFFHAYSAFGPLLTAEKGLLAPFA-TASSPAATLPAPLSDLLIALAKITKNLSYTVSET-QQRSPSSLSSATLSLFLHLFFEHVCSTASC 411
            +L+   + ++T  + AE  L+++ET P F   L  I      DI    R LAVL   N + R+WR           RV                           +PHA+            S+EEK   R  LI +  E  + +A  +A ++AKV R D PRQWP+    L+               +   QDDL+  R + T Y V K LA K L AD+  F  +A  ++      LW    H    FL+Q   G      A V+  L +TL  L V             ++  V+  D L+    H +S F PL+         +  T      T    +   +  +  I KN +Y  S+  +  SP +L +  + +    FF +   T  C
Sbjct:   13 VLTQATSQDTTVLKPAEEQLKQWETQPGFYSVLLNIFTNHTLDIN--VRWLAVLYFKNGIDRYWR-----------RV---------------------------APHAL------------SEEEKTTLRAGLITNFNEPINQIATQIAVLIAKVARLDCPRQWPELIPTLIE--------------SVKVQDDLRQHRALLTFYHVTKTLASKRLAADRKLFYDLASGIYTFACS-LW---NHHTDTFLQQVSSG----NEATVLSALERTLLSLKVLRKLTVNGFVEPHKNIEVMLLDFLDQ---HPFS-FTPLIQRSLEFSVSYVFTEIGEGVTFERFIVQCMNLIKMIVKNYAYKPSKNFEDSSPETLEAHKIKM---AFFTYPTLTEIC 326          
BLAST of EWM28480.1 vs. NCBI_GenBank
Match: gi|597766733|ref|XP_007247235.1| (PREDICTED: importin-11 [Astyanax mexicanus])

HSP 1 Score: 77.411 bits (189), Expect = 3.029e-11
Identity = 85/290 (29.31%), Postives = 118/290 (40.69%), Query Frame = 0
Query:   38 TANSTAREK-AEGALRRFETVPCFLDALAVIIQAPEADIRREARLLAVLCINNVVRRHWRNNNTRNGSQNPRVGGTRLETHVQERFGGSGGRETNNSTSHSPHAVYLREQQLEARTVSDEEKKRTRTFLIYHMCERDDVVAKNLAHVLAKVVRADWPRQWPDFFQQLLSLHPFHGSGAISKNNNFHQQDDLQTLRVIQTLYRVIKELAGKGLLADKAAFQSMARSLFPVVHRELWLPRLHRLVAFLEQGDYGEHVLRRARVVKTLSKTLCYLSVQHAGVLERDSLESFFF 326
            T+ +TA  K AE  LR++ET P F   L  I      D+    R LAVL   N + R+WR           RV                           +PHA+            S+EEK   R  LI +  E  + +A  +A ++AKV R D PRQWP+    LL                   QD LQ  R + T Y V K LA K L AD+  FQ +A S++      LW       +  ++ GD  E +    R + +L K L  L+V H     +++LE+  F
Sbjct:   18 TSQNTAELKPAEEQLRQWETQPGFYSVLLSIFNNHMLDVN--VRWLAVLYFKNGIDRYWR-----------RV---------------------------APHAL------------SEEEKSSLRAGLITNFTEPVNQIATQIAVLIAKVARLDCPRQWPELIPVLLE--------------KVKVQDVLQQHRALLTFYHVTKTLASKRLAADRRLFQDLASSIYSFAC-SLWNHHTDTFLLQIQTGDQQEALSSLERTLLSL-KVLRKLTV-HGFAQPQENLEAMGF 238          
BLAST of EWM28480.1 vs. NCBI_GenBank
Match: gi|1191846977|ref|XP_020932703.1| (importin-11 isoform X2 [Sus scrofa])

HSP 1 Score: 75.8702 bits (185), Expect = 7.687e-11
Identity = 81/274 (29.56%), Postives = 109/274 (39.78%), Query Frame = 0
Query:   38 TANSTAREK-AEGALRRFETVPCFLDALAVIIQAPEADIRREARLLAVLCINNVVRRHWRNNNTRNGSQNPRVGGTRLETHVQERFGGSGGRETNNSTSHSPHAVYLREQQLEARTVSDEEKKRTRTFLIYHMCERDDVVAKNLAHVLAKVVRADWPRQWPDFFQQLLSLHPFHGSGAISKNNNFHQQDDLQTLRVIQTLYRVIKELAGKGLLADKAAFQSMARSLFPVVHRELWLPRLHRLVAFLEQGDYGEHVLRRARVVKTLSKTLCYLSV 310
            T+  TA  K AE  L+++ET P F   L  I      DI    R LAVL   N + R+WR           RV                           +PHA+            S+EEK   R  LI +  E  + +A  +A ++AKV R D PRQWP+    L+               +   QDDL+  R + T Y V K LA K L AD+  F  +A  ++      LW    H    FL+Q   G      A V+ +L +TL  L V
Sbjct:   18 TSQDTAVLKPAEEQLKQWETQPGFYSVLLNIFTNHSLDIN--VRWLAVLYFKNGIDRYWR-----------RV---------------------------APHAL------------SEEEKSTLRAGLITNFNEPINQIATQIAVLIAKVARLDCPRQWPELIPTLIE--------------SVKVQDDLRQHRALLTFYHVTKTLASKCLAADRKLFYDLASGIYSFAC-SLW---NHHTDTFLQQVSSG----NEAAVLSSLERTLLSLKV 217          
BLAST of EWM28480.1 vs. NCBI_GenBank
Match: gi|1191846979|ref|XP_020932704.1| (importin-11 isoform X3 [Sus scrofa])

HSP 1 Score: 75.8702 bits (185), Expect = 7.704e-11
Identity = 81/274 (29.56%), Postives = 109/274 (39.78%), Query Frame = 0
Query:   38 TANSTAREK-AEGALRRFETVPCFLDALAVIIQAPEADIRREARLLAVLCINNVVRRHWRNNNTRNGSQNPRVGGTRLETHVQERFGGSGGRETNNSTSHSPHAVYLREQQLEARTVSDEEKKRTRTFLIYHMCERDDVVAKNLAHVLAKVVRADWPRQWPDFFQQLLSLHPFHGSGAISKNNNFHQQDDLQTLRVIQTLYRVIKELAGKGLLADKAAFQSMARSLFPVVHRELWLPRLHRLVAFLEQGDYGEHVLRRARVVKTLSKTLCYLSV 310
            T+  TA  K AE  L+++ET P F   L  I      DI    R LAVL   N + R+WR           RV                           +PHA+            S+EEK   R  LI +  E  + +A  +A ++AKV R D PRQWP+    L+               +   QDDL+  R + T Y V K LA K L AD+  F  +A  ++      LW    H    FL+Q   G      A V+ +L +TL  L V
Sbjct:   18 TSQDTAVLKPAEEQLKQWETQPGFYSVLLNIFTNHSLDIN--VRWLAVLYFKNGIDRYWR-----------RV---------------------------APHAL------------SEEEKSTLRAGLITNFNEPINQIATQIAVLIAKVARLDCPRQWPELIPTLIE--------------SVKVQDDLRQHRALLTFYHVTKTLASKCLAADRKLFYDLASGIYSFAC-SLW---NHHTDTFLQQVSSG----NEAAVLSSLERTLLSLKV 217          
The following BLAST results are available for this feature:
BLAST of EWM28480.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585110895|gb|EWM28480.1|0.000e+0100.00Importin-beta [Nannochloropsis gaditana][more]
gi|673032818|ref|XP_008870370.1|4.836e-1423.32hypothetical protein H310_06922 [Aphanomyces invad... [more]
gi|669153920|ref|XP_008612522.1|5.321e-1425.00hypothetical protein SDRG_08413 [Saprolegnia dicli... [more]
gi|813118575|ref|XP_012195996.1|6.518e-1424.39hypothetical protein SPRG_02049, partial [Saproleg... [more]
gi|1173952538|gb|OQS00200.1|7.173e-1421.30importin [Thraustotheca clavata][more]
gi|698780319|ref|XP_009823203.1|4.746e-1223.80hypothetical protein H257_01609 [Aphanomyces astac... [more]
gi|826350838|ref|XP_012519960.1|8.292e-1225.57PREDICTED: importin-11 [Propithecus coquereli][more]
gi|597766733|ref|XP_007247235.1|3.029e-1129.31PREDICTED: importin-11 [Astyanax mexicanus][more]
gi|1191846977|ref|XP_020932703.1|7.687e-1129.56importin-11 isoform X2 [Sus scrofa][more]
gi|1191846979|ref|XP_020932704.1|7.704e-1129.56importin-11 isoform X3 [Sus scrofa][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2201rna2201Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications