EWM28480.1, cds2193 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28480.1 vs. NCBI_GenBank
Match: gi|585110895|gb|EWM28480.1| (Importin-beta [Nannochloropsis gaditana]) HSP 1 Score: 1041.95 bits (2693), Expect = 0.000e+0 Identity = 505/505 (100.00%), Postives = 505/505 (100.00%), Query Frame = 0 Query: 1 MQPPQSSADTGPHTNLPCNLGPEHVPDLYRTLLSALDTANSTAREKAEGALRRFETVPCFLDALAVIIQAPEADIRREARLLAVLCINNVVRRHWRNNNTRNGSQNPRVGGTRLETHVQERFGGSGGRETNNSTSHSPHAVYLREQQLEARTVSDEEKKRTRTFLIYHMCERDDVVAKNLAHVLAKVVRADWPRQWPDFFQQLLSLHPFHGSGAISKNNNFHQQDDLQTLRVIQTLYRVIKELAGKGLLADKAAFQSMARSLFPVVHRELWLPRLHRLVAFLEQGDYGEHVLRRARVVKTLSKTLCYLSVQHAGVLERDSLESFFFHAYSAFGPLLTAEKGLLAPFATASSPAATLPAPLSDLLIALAKITKNLSYTVSETQQRSPSSLSSATLSLFLHLFFEHVCSTASCPSEPVLAALVWDPGLESCSRKFYLNACAFLGNCLSCPDYQSGEHHVMLSLPPTKDLMDLFRTFPFLFSIQLVVPRTKEACGWPPISSPRSVSCS 505 MQPPQSSADTGPHTNLPCNLGPEHVPDLYRTLLSALDTANSTAREKAEGALRRFETVPCFLDALAVIIQAPEADIRREARLLAVLCINNVVRRHWRNNNTRNGSQNPRVGGTRLETHVQERFGGSGGRETNNSTSHSPHAVYLREQQLEARTVSDEEKKRTRTFLIYHMCERDDVVAKNLAHVLAKVVRADWPRQWPDFFQQLLSLHPFHGSGAISKNNNFHQQDDLQTLRVIQTLYRVIKELAGKGLLADKAAFQSMARSLFPVVHRELWLPRLHRLVAFLEQGDYGEHVLRRARVVKTLSKTLCYLSVQHAGVLERDSLESFFFHAYSAFGPLLTAEKGLLAPFATASSPAATLPAPLSDLLIALAKITKNLSYTVSETQQRSPSSLSSATLSLFLHLFFEHVCSTASCPSEPVLAALVWDPGLESCSRKFYLNACAFLGNCLSCPDYQSGEHHVMLSLPPTKDLMDLFRTFPFLFSIQLVVPRTKEACGWPPISSPRSVSCS Sbjct: 1 MQPPQSSADTGPHTNLPCNLGPEHVPDLYRTLLSALDTANSTAREKAEGALRRFETVPCFLDALAVIIQAPEADIRREARLLAVLCINNVVRRHWRNNNTRNGSQNPRVGGTRLETHVQERFGGSGGRETNNSTSHSPHAVYLREQQLEARTVSDEEKKRTRTFLIYHMCERDDVVAKNLAHVLAKVVRADWPRQWPDFFQQLLSLHPFHGSGAISKNNNFHQQDDLQTLRVIQTLYRVIKELAGKGLLADKAAFQSMARSLFPVVHRELWLPRLHRLVAFLEQGDYGEHVLRRARVVKTLSKTLCYLSVQHAGVLERDSLESFFFHAYSAFGPLLTAEKGLLAPFATASSPAATLPAPLSDLLIALAKITKNLSYTVSETQQRSPSSLSSATLSLFLHLFFEHVCSTASCPSEPVLAALVWDPGLESCSRKFYLNACAFLGNCLSCPDYQSGEHHVMLSLPPTKDLMDLFRTFPFLFSIQLVVPRTKEACGWPPISSPRSVSCS 505
BLAST of EWM28480.1 vs. NCBI_GenBank
Match: gi|673032818|ref|XP_008870370.1| (hypothetical protein H310_06922 [Aphanomyces invadans] >gi|574474370|gb|ETW01372.1| hypothetical protein H310_06922 [Aphanomyces invadans]) HSP 1 Score: 84.3445 bits (207), Expect = 4.836e-14 Identity = 97/416 (23.32%), Postives = 159/416 (38.22%), Query Frame = 0 Query: 14 TNLPCNLGPEHVPDLYRTLLSALDTANSTAREKAEGALRRFETVPCFLDALAVIIQAPEADIRREARLLAVLCINNVVRRHWRNNNTRNGSQNPRVGGTRLETHVQERFGGSGGRETNNSTSHSPHAVYLREQQLEARTVSDEEKKRTRTFLIYHMCERDDVVAKNLAHVLAKVVRADWPRQWPDFFQQLLSLHPFHGSGAISKNNNFHQQDDLQTLRVIQTLYRVIKELAGKGLLADKAAFQSMARSLFPVVHRELWLPRLHRLVAFLEQGDYGEHVLRRARVVKTLSKTLCYLSVQHAGVLERDSLESFFFHAYSAFGPLLTAEKGLLAPFATASSPAATLPAPLSDLLIALAKITKNLSYTVSETQQRSPSSLSSATLSLFLHLFFEHVCSTASCPSEPVLAALVWDPGLESC 429 T+LP LG H D+ T+ AL + S R E L++ +P F ++ + ++ RL+A L + N V W G G R+ +S EEK R L+ HM E + +A LA +A++ R+D+P++WPD F L +N Q +Q R ++ L V+KELA + L+A + F M+ ++ P + +W ++ L + D ++VL + +K L +L V VL + F F Y F +S +LP P + + +L KI + + V Q+ P A L FL LF+ + P + V+ L + + C Sbjct: 3 TSLPPILGLGHAQDIITTMEQAL-CSQSDVRAAGEATLQQCMKIPGFAQLCLQVLNEAQFPLQPPVRLMAALSLKNAVSASWV---------------------------GRGSRQ---------------------YVISAEEKDEIRRGLLRHMEESNTAIATQLAVTVARIARSDFPKEWPDLFSLL--------------RDNIQQGSHVQQTRALRVLKSVVKELASRRLMAHRVIFNEMSVAVTPFL-AAVWKAQVTELSS--GNLDVVDNVL-------STTKVLHHLVVHGFKVLMPLDVIPFIFSNY-------------FETFRALTSYIHSLP-PDAPGIESLQKIRVSCAGLVVAVQKAHPIEF-RAYLGYFLQLFYAELTHPTPSPDKLVVHLLSYFTNVVGC 330
BLAST of EWM28480.1 vs. NCBI_GenBank
Match: gi|669153920|ref|XP_008612522.1| (hypothetical protein SDRG_08413 [Saprolegnia diclina VS20] >gi|530735968|gb|EQC34210.1| hypothetical protein SDRG_08413 [Saprolegnia diclina VS20]) HSP 1 Score: 85.8853 bits (211), Expect = 5.321e-14 Identity = 83/332 (25.00%), Postives = 126/332 (37.95%), Query Frame = 0 Query: 15 NLPCNLGPEHVPDLYRTLLSALDTANSTAREKAEGALRRFETVPCFLDALAVIIQAPEADIRREARLLAVLCINNVVRRHWRNNNTRNGSQNPRVGGTRLETHVQERFGGSGGRETNNSTSHSPHAVYLREQQLEARTVSDEEKKRTRTFLIYHMCERDDVVAKNLAHVLAKVVRADWPRQWPDFFQQLLSLHPFHGSGAISKNNNFHQQDDLQTLRVIQTLYRVIKELAGKGLLADKAAFQSMARSLFPVVHRELWLPRLHRLVAFLEQGDYGEHVLRRARVVKTLS----KTLCYLSVQHAGVLERDSLESFFFHAYSAFGPLLTAEKGL 342 N+P LGP HV D+ T+ AL + R E L++ +P F +++ P D RL+A L + N V W +R T+S EEK + R L+ H E + VA LA +A++ R+D+P++WPD F L L Q LQ +R ++ L V+KELA + L+ + F M+ + P + +LW ++ +L E D +L +V+ L K L L V H F + Y F LL +GL Sbjct: 2 NVPAALGPSHVGDVVATMEQAL-SPYEEVRVVGEATLQQCMKLPGFACLCLEVLKQPVGD---ATRLMAALSLKNAVASSWITRGSRQF------------------------------------------------TISAEEKLQVRRGLLQHTEETNKAVATQLAVTIARIARSDFPKEWPDLFGVLRDL--------------IQQGSPLQQMRALRVLKSVVKELATRRLMPQRVVFNEMSVVVSPFI-AQLWHSQVQQLQNATEMDDVLTKLLLSTKVLHHLVFYGFKALVPLDVVH----------FIFTNFYQTFQALLAFTQGL 256
BLAST of EWM28480.1 vs. NCBI_GenBank
Match: gi|813118575|ref|XP_012195996.1| (hypothetical protein SPRG_02049, partial [Saprolegnia parasitica CBS 223.65] >gi|641539430|gb|KDO33239.1| hypothetical protein SPRG_02049, partial [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 85.8853 bits (211), Expect = 6.518e-14 Identity = 80/328 (24.39%), Postives = 125/328 (38.11%), Query Frame = 0 Query: 15 NLPCNLGPEHVPDLYRTLLSALDTANSTAREKAEGALRRFETVPCFLDALAVIIQAPEADIRREARLLAVLCINNVVRRHWRNNNTRNGSQNPRVGGTRLETHVQERFGGSGGRETNNSTSHSPHAVYLREQQLEARTVSDEEKKRTRTFLIYHMCERDDVVAKNLAHVLAKVVRADWPRQWPDFFQQLLSLHPFHGSGAISKNNNFHQQDDLQTLRVIQTLYRVIKELAGKGLLADKAAFQSMARSLFPVVHRELWLPRLHRLVAFLEQGDYGEHVLRRARVVKTLSKTLCYLSVQHAGVLERDSLESFFFHAYSAFGPLLTAEKGL 342 N+P LGP HV D+ T+ AL + R E L++ +P F +++ P D RL+A L + N V W +R +S EEK + R L+ H E + VA LA +A++ R+D+P++WPD F L L Q LQ +R ++ L V+KELA + L+ + F M+ + P + +LW HR V L+ E VL + + + L + + ++ D + F + Y F LL GL Sbjct: 2 NVPAALGPSHVSDVVATMEQAL-SPYEEVRVAGEATLQQCMKLPGFACLCLEVLKQPVGD---ATRLMAALSLKNAVASSWITRGSRQF------------------------------------------------MISAEEKLQVRRGLLQHTEETNKAVATQLAVTIARIARSDFPKEWPDLFGILRDL--------------IQQGSPLQQMRALRVLKSVVKELATRRLMPQRVVFNEMSVVVCPFI-AQLW----HRQVQQLQNATEMEDVLTKLLLSTKVLHHLVFYGFK--ALVPLDVVPFIFTNFYQTFQALLAFTHGL 256
BLAST of EWM28480.1 vs. NCBI_GenBank
Match: gi|1173952538|gb|OQS00200.1| (importin [Thraustotheca clavata]) HSP 1 Score: 85.5001 bits (210), Expect = 7.173e-14 Identity = 98/460 (21.30%), Postives = 171/460 (37.17%), Query Frame = 0 Query: 15 NLPCNLGPEHVPDLYRTLLSALDTANSTAREKAEGALRRFETVPCFLDALAVIIQAPEADIRREARLLAVLCINNVVRRHWRNNNTRNGSQNPRVGGTRLETHVQERFGGSGGRETNNSTSHSPHAVYLREQQLEARTVSDEEKKRTRTFLIYHMCERDDVVAKNLAHVLAKVVRADWPRQWPDFFQQLLSLHPFHGSGAISKNNNFHQQDDLQTLRVIQTLYRVIKELAGKGLLADKAAFQSMARSLFPVVHRELWLPRLHRLVAFLEQGDYGEHVLRRARVVKTLSKTLCYLSVQHAGVLERDSLESFFFHAYSAFGPLLTAEKGLLAPFATASSPAATLPAPLSDLLIALAKITKNLSYTVSETQQRSPSSLSSATLSLFLHLFFEHVCSTASCPSEPVLAALVWDPGLESCSRKFYLNACAFLGNCLSCPDYQ-----SGEHHVMLSLPPTKDLMD 469 N+P LG HV D+ T+ AL + + R E L++ +P F + ++ + RL+A L + N V W +R T+S+EEK++ R L+ + E + VA +A +A++ R+D+P++WPD F L N+ Q L ++ L V+KELA + LLA + F M+ ++ P V LW +++ L A +Q + + K L + + ++ D + F + + F LL K LL P + + + + L+ L++A+ Q+ P L FL LF+ + +CP K +N ++L N + C YQ +G +++ + DL D Sbjct: 2 NVPAVLGRGHVRDVIMTMEQAL-SMHPEVRSSGEATLQQCMKLPGFA---CLCLEILGEGVNDATRLMAALSLKNTVTSSWITRGSRQF------------------------------------------------TISNEEKQQVRVGLLQRIEESNKAVATQIAVTIARIARSDFPKEWPDLFGVL--------------RNHIQQGSPLNQSCALRVLKSVVKELASRRLLAHRTIFNEMSAAVCPFVSH-LWQNQVNALKATTDQAEIESLLSSLVLSTKVLHHLVSH---GFKALICLDVIPFIFANFFQTFQGLLQFTKELLPPDSASIQLSYRVLIALTGLVVAV--------------QKEHPIEFRE-FLGPFLQLFYTMLTEQHNCPD------------------KLLINMISYLTNVMGCILYQNLPSMTGAQRSVITAAGSVDLTD 358
BLAST of EWM28480.1 vs. NCBI_GenBank
Match: gi|698780319|ref|XP_009823203.1| (hypothetical protein H257_01609 [Aphanomyces astaci] >gi|574122864|gb|ETV88340.1| hypothetical protein H257_01609 [Aphanomyces astaci]) HSP 1 Score: 79.7221 bits (195), Expect = 4.746e-12 Identity = 99/416 (23.80%), Postives = 156/416 (37.50%), Query Frame = 0 Query: 14 TNLPCNLGPEHVPDLYRTLLSALDTANSTAREKAEGALRRFETVPCFLDALAVIIQAPEADIRREARLLAVLCINNVVRRHWRNNNTRNGSQNPRVGGTRLETHVQERFGGSGGRETNNSTSHSPHAVYLREQQLEARTVSDEEKKRTRTFLIYHMCERDDVVAKNLAHVLAKVVRADWPRQWPDFFQQLLSLHPFHGSGAISKNNNFHQQDDLQTLRVIQTLYRVIKELAGKGLLADKAAFQSMARSLFPVVHRELWLPRLHRLVAFLEQGDYGEHVLRRARVVKTLSKTLCYLSVQHAGVLERDSLESFFFHAYSAFGPLLTAEKGLLAPFATASSPAATLPAPLSDLLIALAKITKNLSYTVSETQQRSPSSLSSATLSLFLHLFFEHVCSTASCPSEPVLAALVWDPGLESC 429 T+LP LG H D+ T+ A+ + + T R E L+ +P F ++ + + RL+ L + N V W TR +S EEK R L+ HM E VA LA +A++ R+D+P+ WPD F L +N Q LQ R ++ L V+KELA + L++ +A F M+ ++ P + +W + VA L G+ + VL V + +K L +L + VL + F F AY F ++ +TLP P + + L KI +++ V Q+ P A L FL F+ + A P V+ L + + C Sbjct: 2 TSLPPALGAAHAQDIITTMEQAMFSQSDT-RAAGEATLQLCMKIPGFALLCLQLLNEAQYQLPAPIRLMVALSLKNAVSTSWVGRGTRQ------------------------------------------------YVISAEEKDNVRRGLLRHMDESSSAVATQLAVTIARIARSDFPKDWPDLFSVL--------------RDNIQQGTLLQQTRALRVLKSVVKELASRRLMSHRAIFNDMSVAVCPFL-ASVWKSQ----VAQLSAGN--QDVLGN---VLSTTKVLHHLVLHGFKVLVPLDVIPFVFSAY-------------FDTFRALTTYISTLP-PDTPGVDVLNKIRVSIAGLVVAVQKAHPIEF-RAYLGPFLTQFYTTLTDPAPSPDRLVVHLLSYLTNVVGC 329
BLAST of EWM28480.1 vs. NCBI_GenBank
Match: gi|826350838|ref|XP_012519960.1| (PREDICTED: importin-11 [Propithecus coquereli]) HSP 1 Score: 78.9518 bits (193), Expect = 8.292e-12 Identity = 101/395 (25.57%), Postives = 151/395 (38.23%), Query Frame = 0 Query: 32 LLSALDTANSTAREKAEGALRRFETVPCFLDALAVIIQAPEADIRREARLLAVLCINNVVRRHWRNNNTRNGSQNPRVGGTRLETHVQERFGGSGGRETNNSTSHSPHAVYLREQQLEARTVSDEEKKRTRTFLIYHMCERDDVVAKNLAHVLAKVVRADWPRQWPDFFQQLLSLHPFHGSGAISKNNNFHQQDDLQTLRVIQTLYRVIKELAGKGLLADKAAFQSMARSLFPVVHRELWLPRLHRLVAFLEQGDYGEHVLRRARVVKTLSKTLCYLSV-------------QHAGVLERDSLESFFFHAYSAFGPLLTAEKGLLAPFA-TASSPAATLPAPLSDLLIALAKITKNLSYTVSET-QQRSPSSLSSATLSLFLHLFFEHVCSTASC 411 +L+ + ++T + AE L+++ET P F L I DI R LAVL N + R+WR RV +PHA+ S+EEK R LI + E + +A +A ++AKV R D PRQWP+ L+ + QDDL+ R + T Y V K LA K L AD+ F +A ++ LW H FL+Q G A V+ L +TL L V ++ V+ D L+ H +S F PL+ + T T + + + I KN +Y S+ + SP +L + + + FF + T C Sbjct: 13 VLTQATSQDTTVLKPAEEQLKQWETQPGFYSVLLNIFTNHTLDIN--VRWLAVLYFKNGIDRYWR-----------RV---------------------------APHAL------------SEEEKTTLRAGLITNFNEPINQIATQIAVLIAKVARLDCPRQWPELIPTLIE--------------SVKVQDDLRQHRALLTFYHVTKTLASKRLAADRKLFYDLASGIYTFACS-LW---NHHTDTFLQQVSSG----NEATVLSALERTLLSLKVLRKLTVNGFVEPHKNIEVMLLDFLDQ---HPFS-FTPLIQRSLEFSVSYVFTEIGEGVTFERFIVQCMNLIKMIVKNYAYKPSKNFEDSSPETLEAHKIKM---AFFTYPTLTEIC 326
BLAST of EWM28480.1 vs. NCBI_GenBank
Match: gi|597766733|ref|XP_007247235.1| (PREDICTED: importin-11 [Astyanax mexicanus]) HSP 1 Score: 77.411 bits (189), Expect = 3.029e-11 Identity = 85/290 (29.31%), Postives = 118/290 (40.69%), Query Frame = 0 Query: 38 TANSTAREK-AEGALRRFETVPCFLDALAVIIQAPEADIRREARLLAVLCINNVVRRHWRNNNTRNGSQNPRVGGTRLETHVQERFGGSGGRETNNSTSHSPHAVYLREQQLEARTVSDEEKKRTRTFLIYHMCERDDVVAKNLAHVLAKVVRADWPRQWPDFFQQLLSLHPFHGSGAISKNNNFHQQDDLQTLRVIQTLYRVIKELAGKGLLADKAAFQSMARSLFPVVHRELWLPRLHRLVAFLEQGDYGEHVLRRARVVKTLSKTLCYLSVQHAGVLERDSLESFFF 326 T+ +TA K AE LR++ET P F L I D+ R LAVL N + R+WR RV +PHA+ S+EEK R LI + E + +A +A ++AKV R D PRQWP+ LL QD LQ R + T Y V K LA K L AD+ FQ +A S++ LW + ++ GD E + R + +L K L L+V H +++LE+ F Sbjct: 18 TSQNTAELKPAEEQLRQWETQPGFYSVLLSIFNNHMLDVN--VRWLAVLYFKNGIDRYWR-----------RV---------------------------APHAL------------SEEEKSSLRAGLITNFTEPVNQIATQIAVLIAKVARLDCPRQWPELIPVLLE--------------KVKVQDVLQQHRALLTFYHVTKTLASKRLAADRRLFQDLASSIYSFAC-SLWNHHTDTFLLQIQTGDQQEALSSLERTLLSL-KVLRKLTV-HGFAQPQENLEAMGF 238
BLAST of EWM28480.1 vs. NCBI_GenBank
Match: gi|1191846977|ref|XP_020932703.1| (importin-11 isoform X2 [Sus scrofa]) HSP 1 Score: 75.8702 bits (185), Expect = 7.687e-11 Identity = 81/274 (29.56%), Postives = 109/274 (39.78%), Query Frame = 0 Query: 38 TANSTAREK-AEGALRRFETVPCFLDALAVIIQAPEADIRREARLLAVLCINNVVRRHWRNNNTRNGSQNPRVGGTRLETHVQERFGGSGGRETNNSTSHSPHAVYLREQQLEARTVSDEEKKRTRTFLIYHMCERDDVVAKNLAHVLAKVVRADWPRQWPDFFQQLLSLHPFHGSGAISKNNNFHQQDDLQTLRVIQTLYRVIKELAGKGLLADKAAFQSMARSLFPVVHRELWLPRLHRLVAFLEQGDYGEHVLRRARVVKTLSKTLCYLSV 310 T+ TA K AE L+++ET P F L I DI R LAVL N + R+WR RV +PHA+ S+EEK R LI + E + +A +A ++AKV R D PRQWP+ L+ + QDDL+ R + T Y V K LA K L AD+ F +A ++ LW H FL+Q G A V+ +L +TL L V Sbjct: 18 TSQDTAVLKPAEEQLKQWETQPGFYSVLLNIFTNHSLDIN--VRWLAVLYFKNGIDRYWR-----------RV---------------------------APHAL------------SEEEKSTLRAGLITNFNEPINQIATQIAVLIAKVARLDCPRQWPELIPTLIE--------------SVKVQDDLRQHRALLTFYHVTKTLASKCLAADRKLFYDLASGIYSFAC-SLW---NHHTDTFLQQVSSG----NEAAVLSSLERTLLSLKV 217
BLAST of EWM28480.1 vs. NCBI_GenBank
Match: gi|1191846979|ref|XP_020932704.1| (importin-11 isoform X3 [Sus scrofa]) HSP 1 Score: 75.8702 bits (185), Expect = 7.704e-11 Identity = 81/274 (29.56%), Postives = 109/274 (39.78%), Query Frame = 0 Query: 38 TANSTAREK-AEGALRRFETVPCFLDALAVIIQAPEADIRREARLLAVLCINNVVRRHWRNNNTRNGSQNPRVGGTRLETHVQERFGGSGGRETNNSTSHSPHAVYLREQQLEARTVSDEEKKRTRTFLIYHMCERDDVVAKNLAHVLAKVVRADWPRQWPDFFQQLLSLHPFHGSGAISKNNNFHQQDDLQTLRVIQTLYRVIKELAGKGLLADKAAFQSMARSLFPVVHRELWLPRLHRLVAFLEQGDYGEHVLRRARVVKTLSKTLCYLSV 310 T+ TA K AE L+++ET P F L I DI R LAVL N + R+WR RV +PHA+ S+EEK R LI + E + +A +A ++AKV R D PRQWP+ L+ + QDDL+ R + T Y V K LA K L AD+ F +A ++ LW H FL+Q G A V+ +L +TL L V Sbjct: 18 TSQDTAVLKPAEEQLKQWETQPGFYSVLLNIFTNHSLDIN--VRWLAVLYFKNGIDRYWR-----------RV---------------------------APHAL------------SEEEKSTLRAGLITNFNEPINQIATQIAVLIAKVARLDCPRQWPELIPTLIE--------------SVKVQDDLRQHRALLTFYHVTKTLASKCLAADRKLFYDLASGIYSFAC-SLW---NHHTDTFLQQVSSG----NEAAVLSSLERTLLSLKV 217 The following BLAST results are available for this feature:
BLAST of EWM28480.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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