EWM28497.1, cds2190 (CDS) Nannochloropsis gaditana

Overview
NameEWM28497.1
Unique Namecds2190
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:1141448..1141606 +
Alignment locationCM002458.1:1141703..1142101 +

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Properties
Property NameValue
Protein idEWM28497.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100058g26.4264.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:1141448..1141606 +
CM002458.1supercontigCM002458.1:1141703..1142101 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM28497.1 vs. NCBI_GenBank
Match: gi|585110913|gb|EWM28497.1| (hypothetical protein Naga_100058g26 [Nannochloropsis gaditana])

HSP 1 Score: 371.318 bits (952), Expect = 4.077e-130
Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 0 
Query:    1 MADAVNTIIDAVKEMVQDVGEKVGAAVKDALHVPDNFAPMVQTLKELVTSGQKFASGEGSTEELNGLSTKLSSFSAMVDTLEDGPLKKMVLTLRDQAVSQLKDVKGSEKVGDSPSDPPAGCSYVFLLLDFLSSTEDSWRIPIISGLSFTLLSKLEVLLVCAEIHAASAPSGQAFENIFALSFISF 185
            MADAVNTIIDAVKEMVQDVGEKVGAAVKDALHVPDNFAPMVQTLKELVTSGQKFASGEGSTEELNGLSTKLSSFSAMVDTLEDGPLKKMVLTLRDQAVSQLKDVKGSEKVGDSPSDPPAGCSYVFLLLDFLSSTEDSWRIPIISGLSFTLLSKLEVLLVCAEIHAASAPSGQAFENIFALSFISF
Sbjct:    1 MADAVNTIIDAVKEMVQDVGEKVGAAVKDALHVPDNFAPMVQTLKELVTSGQKFASGEGSTEELNGLSTKLSSFSAMVDTLEDGPLKKMVLTLRDQAVSQLKDVKGSEKVGDSPSDPPAGCSYVFLLLDFLSSTEDSWRIPIISGLSFTLLSKLEVLLVCAEIHAASAPSGQAFENIFALSFISF 185
The following BLAST results are available for this feature:
BLAST of EWM28497.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585110913|gb|EWM28497.1|4.077e-130100.00hypothetical protein Naga_100058g26 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2198rna2198Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications