EWM28487.1, cds2188 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28487.1 vs. NCBI_GenBank
Match: gi|585110903|gb|EWM28487.1| (Protein of unknown function DUF72 [Nannochloropsis gaditana]) HSP 1 Score: 1024.23 bits (2647), Expect = 0.000e+0 Identity = 495/495 (100.00%), Postives = 495/495 (100.00%), Query Frame = 0 Query: 1 MTTSGEVVLSSADSPGQFYLGTAGYTYPHWRRCFYPPGLPHAKELRFYAQTLNTCEVNTTFYGIPSEATMTSWIEQVRPVNPNFRFALKMKKTVTHGGEANIDSDINDAKPSVPAAANPTSPAAAGSRLKEHYSHPLHPAALAHELPLFFKRASSLPPSMRGPILFQFPPSYTCDLSSLHRLADALDMYVSRPTPTSSPQWRCALEFRHPSWFCPAVFSFLHVQEWALVLHALPKQQQHEQALAAEVARPITSSHFVYLRLHGLKEEHAWDYTREELDEYVRNIKKWREGEGESGVAGGREEEEEGEFTGGRDVYVYFLNDAEGRAPENALLMGQMVAEAMGRGEKAPRKPRAGVAITKYFGGRTNEGAEGESREDEALQRTTVGFQSERQKLGGKKRARLEACGRDFQEGEGNAGDTGGRSEERRGRVEREETVGTRSGPRDLLRSASSSELEEDTGGKKGKDEGASDATSKNMGPSTSGKGPARITQFFGPKK 495 MTTSGEVVLSSADSPGQFYLGTAGYTYPHWRRCFYPPGLPHAKELRFYAQTLNTCEVNTTFYGIPSEATMTSWIEQVRPVNPNFRFALKMKKTVTHGGEANIDSDINDAKPSVPAAANPTSPAAAGSRLKEHYSHPLHPAALAHELPLFFKRASSLPPSMRGPILFQFPPSYTCDLSSLHRLADALDMYVSRPTPTSSPQWRCALEFRHPSWFCPAVFSFLHVQEWALVLHALPKQQQHEQALAAEVARPITSSHFVYLRLHGLKEEHAWDYTREELDEYVRNIKKWREGEGESGVAGGREEEEEGEFTGGRDVYVYFLNDAEGRAPENALLMGQMVAEAMGRGEKAPRKPRAGVAITKYFGGRTNEGAEGESREDEALQRTTVGFQSERQKLGGKKRARLEACGRDFQEGEGNAGDTGGRSEERRGRVEREETVGTRSGPRDLLRSASSSELEEDTGGKKGKDEGASDATSKNMGPSTSGKGPARITQFFGPKK Sbjct: 1 MTTSGEVVLSSADSPGQFYLGTAGYTYPHWRRCFYPPGLPHAKELRFYAQTLNTCEVNTTFYGIPSEATMTSWIEQVRPVNPNFRFALKMKKTVTHGGEANIDSDINDAKPSVPAAANPTSPAAAGSRLKEHYSHPLHPAALAHELPLFFKRASSLPPSMRGPILFQFPPSYTCDLSSLHRLADALDMYVSRPTPTSSPQWRCALEFRHPSWFCPAVFSFLHVQEWALVLHALPKQQQHEQALAAEVARPITSSHFVYLRLHGLKEEHAWDYTREELDEYVRNIKKWREGEGESGVAGGREEEEEGEFTGGRDVYVYFLNDAEGRAPENALLMGQMVAEAMGRGEKAPRKPRAGVAITKYFGGRTNEGAEGESREDEALQRTTVGFQSERQKLGGKKRARLEACGRDFQEGEGNAGDTGGRSEERRGRVEREETVGTRSGPRDLLRSASSSELEEDTGGKKGKDEGASDATSKNMGPSTSGKGPARITQFFGPKK 495
BLAST of EWM28487.1 vs. NCBI_GenBank
Match: gi|1181362527|ref|WP_084663376.1| (DUF72 domain-containing protein [Thermanaeromonas toyohensis] >gi|1174086882|emb|SMB90605.1| Uncharacterized conserved protein YecE, DUF72 family [Thermanaeromonas toyohensis ToBE]) HSP 1 Score: 135.961 bits (341), Expect = 3.050e-33 Identity = 109/323 (33.75%), Postives = 143/323 (44.27%), Query Frame = 0 Query: 16 GQFYLGTAGYTYPHWRRCFYPPGLPHAKELRFYAQTLNTCEVNTTFYGIPSEATMTSWIEQVRPVNPNFRFALKMKKTVTHGGEANIDSDINDAKPSVPAAANPTSPAAAGSRLKEHYSHPLHPAALAHELPLFFKRASSLPPSMRGPILFQFPPSYTCDLSSLHRLADALDMYVSRPTPTSSPQWRCALEFRHPSWFCPAVFSFLHVQEWALVLHALPKQQQHEQALAAEVARPITSSHFVYLRLHGLKEEHAWDYTREELDEYVRNIKKWREGEGESGVAGGREEEEEGEFTGGRDVYVYFLNDAEGRAPENALLMGQMVA 338 + +LGT+G+ YPHWR FYP LP L+FYA T E+N TFY +P T +W EQ +F FALK + +TH RLKE + EL FF S L + G IL+Q PP D L AL + P +S Q R + EFRH +WF P V+S L + AL L P+ + E+ IT+S FVY+R HG ++ +A YTREEL E+ + IK W E DVY YF NDA+G A NA + ++A Sbjct: 2 AKLFLGTSGFNYPHWRGRFYPLELPSKDWLKFYASYFPTVELNVTFYRLPRPTTFGNWYEQT---PEDFTFALKGHRQITHY-----------------------------KRLKETET----------ELEKFFHHVSHLQHKL-GIILWQLPPGLKADTKLLADFIAALQAH-----PLAS-QVRHSFEFRHATWFSPQVYSLLSLAGCALCLADSPRWPKVEE---------ITAS-FVYIRFHGSQKLYASSYTREELKEWAKKIKHWLE--------------------QNLDVYAYFNNDAQGYALANARDLLDLLA 245
BLAST of EWM28487.1 vs. NCBI_GenBank
Match: gi|923123993|ref|XP_013755465.1| (hypothetical protein AMSG_08400 [Thecamonas trahens ATCC 50062] >gi|906559180|gb|KNC52423.1| hypothetical protein AMSG_08400 [Thecamonas trahens ATCC 50062]) HSP 1 Score: 135.191 bits (339), Expect = 6.801e-32 Identity = 102/364 (28.02%), Postives = 156/364 (42.86%), Query Frame = 0 Query: 15 PGQFYLGTAGYTYPHWRR-CFYPPGLPHAKELRFYAQTLNTCEVNTTFYGIPSEATMTSWIEQVRPVNPNFRFALKMKKTVTHGGEANIDSDINDAKPSVPAAANPTSPAAAGSRLKEHYSHPLHPAALAHELPLFFKRASSLPPSMRGPILFQFPPSYTCDLSSLHRLADALDMYVSRPTPTSSPQWRCALEFRHPSWFCPAVFSFLHVQEWALVLHALPKQQQHEQALAAEVARPITSSHFVYLRLHGLKEEHAWDYTREELDEYVRNIKKWREGEGESGVAGGREEEEEGEFTGGRDVYVYFLNDAEGRAPENALLMGQMVAEAMGRGEKAPRKPRAGVAITKYFGGRTNEGAEGESREDE 377 PG G AG++ P WR+ F+P GL +E YA TCE+NT+FYGIP E+T+ W +Q +F++A+K+ K+VTH +S + D ++ R PL ++ +L GP+LFQ PP + L L +LA L + R A EFRHPSWF V++ L WALVL + P E+ ++ + Y+R HG++ H +YT +EL + IK+W G+DV+ YF D NA ++ + G+ K P+ P G ++ +FG R + + D+ Sbjct: 10 PGVLRCGHAGFSSPEWRKGVFFPHGLKKDQEFFHYANRYPTCEMNTSFYGIPRESTIQGWAKQA--TGRSFQYAIKVPKSVTH------ESQLEDPGDTI--------------RFLWKRLAPL-------------RKVGAL-----GPLLFQLPPRFARSLDKLQQLALVLHELDDKE------HLRVAFEFRHPSWFRADVYAVLRANNWALVLSSHPDLPWVEE----------LTADWTYIRFHGIRLLHEDNYTDDELTTFTTRIKRW--------------------LADGKDVFAYFQFDKGSTGLNNA---ATLITQVTGKAPK-PQAPAKGTLMS-FFGKRKRDSPPPSAVPDD 292
BLAST of EWM28487.1 vs. NCBI_GenBank
Match: gi|654110448|ref|WP_027719350.1| (DUF72 domain-containing protein [Desulfovirgula thermocuniculi]) HSP 1 Score: 129.028 bits (323), Expect = 1.113e-30 Identity = 102/322 (31.68%), Postives = 136/322 (42.24%), Query Frame = 0 Query: 16 GQFYLGTAGYTYPHWRRCFYPPGLPHAKELRFYAQTLNTCEVNTTFYGIPSEATMTSWIEQVRPVNPNFRFALKMKKTVTHGGEANIDSDINDAKPSVPAAANPTSPAAAGSRLKEHYSHPLHPAALAHELPLFFKRASSLPPSMRGPILFQFPPSYTCDLSSLHRLADALDMYVSRPTPTSSPQWRCALEFRHPSWFCPAVFSFLHVQEWALVLHALPKQQQHEQALAAEVARPITSSHFVYLRLHGLKEEHAWDYTREELDEYVRNIKKWREGEGESGVAGGREEEEEGEFTGGRDVYVYFLNDAEGRAPENALLMGQMV 337 G Y+GT+GY YPHWR FYPP +P L FYA+ NT E+N TFY T W E P+FRFALK + +TH SD+ +A S FF+ A+ L + +L+QFPPS+ D A + R P ++ R A EFRH SWF P + L +AL + P+ Q E+ ++ FVYLR HG K+ + +Y+ EL + R I+ W G DVY YF NDAEG A NA + +V Sbjct: 4 GGLYIGTSGYNYPHWRERFYPPEMPARAWLGFYAEHFNTVELNVTFYRQVQPRTFEKWHETT---PPDFRFALKGHRFITHLRRL---SDVGEAVAS------------------------------------FFRCAAHLEEKL-AVVLWQFPPSFQSD-----EALLAAFCALLREIPPAART-RHAFEFRHRSWFAPPTYRILAAGNFALCIGDSPRWPQAEE----------ITADFVYLRFHGGKQLYRSNYSTAELGTWARRIEGW--------------------LGQGLDVYAYFNNDAEGHALHNAAELRALV 246
BLAST of EWM28487.1 vs. NCBI_GenBank
Match: gi|1129192318|gb|OLP97155.1| (Uncharacterized protein C18H10.09 [Symbiodinium microadriaticum]) HSP 1 Score: 134.035 bits (336), Expect = 1.696e-29 Identity = 108/346 (31.21%), Postives = 145/346 (41.91%), Query Frame = 0 Query: 16 GQFYLGTAGYTYPHWRRCFYPPGLPHAK-ELRFYAQTLNTCEVNTTFYGIPSEATMTSWIEQVRPVNPNFRFALKMKKTVTHGGEANIDSDINDAKPSVPAAANPTSPAAAGSRLKEHYSHPLHPAALAHELPLFFKRASSLPPSMRGPILFQFPPSYTCDLSSLHRLADALDMYVSRPTPTSSPQWRCALEFRHPSWFCPA-VFSFLHVQEWALVLH------ALPKQQQHEQALAAEVARPITSSHFVYLRLHGLKEEHAWDYTREELDEYVRNIKKWREGEGESGVAGGREEEEEGEFTGGRDVYVYFLNDAEGRA-PENALLMGQMVAEAMGRGEKAPRKPR 352 G Y+GTAG++ HW CFYP + +L Y +T EVN++FYG+PS T+T W R F LK+ KTVTH A +P +PAA S L H F +R + L + GP+LFQ P S D+ L ++ AL P + A EFRH SWF FL + WALV H A + A E + ++ FVY+RLHG + H + YT EEL Y + + WR G V+ Y LND G A P+NA + ++ GE PR P+ Sbjct: 86 GSLYVGTAGFSSAHWAGCFYPGNAKKGEDQLECYQETFWAVEVNSSFYGVPSTDTITCW---RRRCAEGFLMGLKVPKTVTHD------------------AGSPAAPAALES--------------LRH----FAQRVAGLGRHL-GPVLFQCPRSLKADVKILQQVDTALAAL-----PEEARLKDVAFEFRHASWFEDVEALGFLRSKNWALVQHPNALGRATSADTAQYETYALEPLQASRTADFVYVRLHGNNDAHQYRYTDEELSRYAQQLHDWR--------------------LQGLRVFCYLLNDDAGAAMPQNAKRLHELCCRLA--GEAPPRGPK 364
BLAST of EWM28487.1 vs. NCBI_GenBank
Match: gi|739723749|ref|WP_037577405.1| (DUF72 domain-containing protein [Sporocytophaga myxococcoides]) HSP 1 Score: 123.635 bits (309), Expect = 1.467e-28 Identity = 90/341 (26.39%), Postives = 146/341 (42.82%), Query Frame = 0 Query: 12 ADSPGQFYLGTAGYTYPHWRRCFYPPGLPHAKELRFYAQTLNTCEVNTTFYGIPSEATMTSWIEQVRPVNPN-FRFALKMKKTVTHGGEANIDSDINDAKPSVPAAANPTSPAAAGSRLKEHYSHPLHPAALAHELPLFFKRASSLPPSMRGPILFQFPPSYTCDLSSLHRLADALDMYVSRPTPTSSPQWRCALEFRHPSWFCPAVFSFLHVQEWALVLHALPKQQQHEQALAAEVARPITSSHFVYLRLHGLKEEHAWDYTREELDEYVRNIKKWREGEGESGVAGGREEEEEGEFTGGRDVYVYFLNDAEGRAPENALLMGQMVAEAMGRGEKAPRKP 351 ++ G+ Y+GT+G+ Y HW FYP L +Y +T E+N +FY +PS ++W + + P F F++K + +TH N+ S+ + + SP LKE GPILFQ PP+ ++ L L P+ +R EFRHPSW+ V+ L A ++ L ++ I+++ FVY+RLHG +E+++ DY++++L+E+ + K W + G+DVY+YF ND AP NAL + E + +G+K KP Sbjct: 2 SEKKGKIYVGTSGWHYKHWIGKFYPEKTASKDLLDYYDSFFDTLELNNSFYRLPSSEQFSNWYK----ITPKGFLFSIKASRYITHIKRLNMPSE------GIKKLIDSISP------LKEK----------------------------LGPILFQLPPNMKLNIQRLEEFIGFL--------PSG---FRYTFEFRHPSWYTEDVYKLLKKNNCAFCIYEL----------NHHMSPVISTADFVYIRLHGPEEKYSGDYSKKQLNEWAESCKNWLD--------------------EGKDVYIYFDNDQNAYAPFNALYL----KETLQKGKKKHSKP 253
BLAST of EWM28487.1 vs. NCBI_GenBank
Match: gi|780066621|ref|WP_045457837.1| (DUF72 domain-containing protein [Sporocytophaga myxococcoides] >gi|695129053|dbj|GAL83245.1| hypothetical protein MYP_471 [Sporocytophaga myxococcoides]) HSP 1 Score: 117.472 bits (293), Expect = 2.542e-26 Identity = 88/341 (25.81%), Postives = 140/341 (41.06%), Query Frame = 0 Query: 16 GQFYLGTAGYTYPHWRRCFYPPGLPHAKELRFYAQTLNTCEVNTTFYGIPSEATMTSWIEQVRPVNPNFRFALKMKKTVTHGGEANIDSDINDAKPSVPAAANPTSPAAAGSRLKEHYSHPLHPAALAHELPLFFKRASSLPPSMRGPILFQFPPSYTCDLSSLHRLADALDMYVSRPTPTSSPQWRCALEFRHPSWFCPAVFSFLHVQEWALVLHALPKQQQHEQALAAEVARPITSSHFVYLRLHGLKEEHAWDYTREELDEYVRNIKKWREGEGESGVAGGREEEEEGEFTGGRDVYVYFLNDAEGRAPENALLMGQMVAEAMGRGEKAPRKPRAGVA 356 G+ ++GT+G+ Y HW FYP + L +Y T E+N +FY +P+ + W F F++K + +TH N+ P +L + S AL +L GPILFQ PP+ ++ L L P+ +R EFRHPSW+ V+ L A ++ L ++ IT++ FVY+RLHG +E+++ DY++++L+E+ + K W G+DV++YF ND AP NAL + E + +G+K KP A Sbjct: 6 GKIFVGTSGWHYKHWIGKFYPEKMASKDLLAYYDSFFETLELNNSFYKLPTSEQFSVWYNNTPK---GFLFSIKASRYITHIKRLNM-------------------PTEGIKKLIDSIS------ALEEKL---------------GPILFQLPPNMKLNIERLEEFISYL--------PSG---FRYTFEFRHPSWYNEEVYELLKKNNCAFCIYELNHH----------MSPVITTADFVYIRLHGPEEKYSGDYSKKQLNEWAESCKNW--------------------LADGKDVFIYFDNDQNAYAPFNALYL----KERLQKGKKKHVKPNYSDA 258
BLAST of EWM28487.1 vs. NCBI_GenBank
Match: gi|551229962|ref|WP_022853751.1| (DUF72 domain-containing protein [Thermodesulfatator atlanticus]) HSP 1 Score: 117.472 bits (293), Expect = 2.699e-26 Identity = 96/329 (29.18%), Postives = 135/329 (41.03%), Query Frame = 0 Query: 20 LGTAGYTYPHWRRCFYPPGLPHAKELRFYAQTLNTCEVNTTFYGIPSEATMTSWIEQVRPVNPNFRFALKMKKTVTHGGEANIDSDINDAKPSVPAAANPTSPAAAGSRLKEHYSHPLHPAALAHELPLFFKRASSLPPSMRGPILFQFPPSYTCDLSSLHRLADALDMYVSRPTPTSSPQWRCALEFRHPSWFCPAVFSFLHVQEWALVLHALPKQQQHEQALAAEVARPITSSHFVYLRLHGLKEEHAWDYTREELDEYVRNIKKWREGEGESGVAGGREEEEEGEFTGGRDVYVYFLNDAEGRAPENALLMGQMVAE-AMGRGEKA 347 +GT+G+ YPHW+ FYP LP K L +Y++ T EVN TFYG P E T W E+ +F FALK + +TH RLK+ +A L F+ S L + GPILFQ PPS D S L LD+ ++ A+E RH S+ C + L +L L + A + ++ FVY+RLHG + + YT EEL + + +K W YVYF ND+ G A NAL + +++ + A G +KA Sbjct: 12 IGTSGWNYPHWKGIFYPEKLPSTKWLSYYSEFFETVEVNATFYGTPKEKTFKKWYEE---TPSDFIFALKANRFITH-----------------------------VKRLKD----------VAEPLKRFYAAISPLKEKI-GPILFQLPPSLKYDRSLLKEFVRLLDL-----------SYKTAIEVRHQSFLCEEFYELLRRFNISLCL--------SDTAGRYPSLVEVLTADFVYVRLHGSRVLYRSCYTEEELQAWAQKLKSW-----------------------AIPAYVYFDNDSLGWAVPNALRLKELLGQPAKGLSDKA 255
BLAST of EWM28487.1 vs. NCBI_GenBank
Match: gi|1175381269|ref|WP_081929061.1| (DUF72 domain-containing protein [Microvirga sp. BSC39]) HSP 1 Score: 117.087 bits (292), Expect = 6.751e-26 Identity = 93/321 (28.97%), Postives = 131/321 (40.81%), Query Frame = 0 Query: 20 LGTAGYTYPHWRRCFYPPGLPHAKELRFYAQTLNTCEVNTTFYGIPSEATMTSWIEQVRPVNPNFRFALKMKKTVTHGGEANIDSDINDAKPSVPAAANPTSPAAAGSRLKEHYSHPLHPAALAHELPLFFKRASSLPPSMRGPILFQFPPSYTCDLSSLHRLADALDMYVSRPTPTSSPQ-WRCALEFRHPSWFCPAVFSFLHVQEWALVLHALPKQQQHEQALAAEVARPITSSHFVYLRLHGLKEEHAWDYTREELDEYVRNIKKWREGEGESGVAGGREEEEEGEFTGGRDVYVYFLNDAEGRAPENALLMGQMVAE 339 +GT+G+ Y W FYP L L +Y Q +T E+N +FY +P+E + +W + F FA K + +TH RLK + + L F R SSL GP+LFQ PP++ D + R+A L + PQ RCA EFRHPSW+ + F L AL + H A A A ++ FVY+R HG +A Y+ E L ++ I WR+ E R VYVYF ND + AP +A + ++V E Sbjct: 37 IGTSGWHYRSWHGPFYPARLKIKDFLSYYVQRFDTAEINNSFYRLPTERAVQAWHDST---PKRFLFAWKASRFITHM-----------------------------KRLK----------GIEESIDLVFGRMSSLSDKF-GPVLFQLPPTFKADAETRERVARCLSLV---------PQGRRCAFEFRHPSWYEESAFRILRDHNTALCI------SDHADAPAPWEA----TADFVYVRAHGTNGRYAGSYSAETLQDWTHRIADWRKDE--------------------RSVYVYFDNDIKSAAPGDAQTLLRLVDE 275
BLAST of EWM28487.1 vs. NCBI_GenBank
Match: gi|672305020|gb|KFG67701.1| (hypothetical protein JH26_20650 [Microvirga sp. BSC39]) HSP 1 Score: 115.546 bits (288), Expect = 1.046e-25 Identity = 92/320 (28.75%), Postives = 130/320 (40.62%), Query Frame = 0 Query: 20 LGTAGYTYPHWRRCFYPPGLPHAKELRFYAQTLNTCEVNTTFYGIPSEATMTSWIEQVRPVNPNFRFALKMKKTVTHGGEANIDSDINDAKPSVPAAANPTSPAAAGSRLKEHYSHPLHPAALAHELPLFFKRASSLPPSMRGPILFQFPPSYTCDLSSLHRLADALDMYVSRPTPTSSPQWRCALEFRHPSWFCPAVFSFLHVQEWALVLHALPKQQQHEQALAAEVARPITSSHFVYLRLHGLKEEHAWDYTREELDEYVRNIKKWREGEGESGVAGGREEEEEGEFTGGRDVYVYFLNDAEGRAPENALLMGQMVAE 339 +GT+G+ Y W FYP L L +Y Q +T E+N +FY +P+E + +W + F FA K + +TH RLK + + L F R SSL GP+LFQ PP++ D + R+A L + P RCA EFRHPSW+ + F L AL + H A A A ++ FVY+R HG +A Y+ E L ++ I WR+ E R VYVYF ND + AP +A + ++V E Sbjct: 6 IGTSGWHYRSWHGPFYPARLKIKDFLSYYVQRFDTAEINNSFYRLPTERAVQAWHDST---PKRFLFAWKASRFITHM-----------------------------KRLK----------GIEESIDLVFGRMSSLSDKF-GPVLFQLPPTFKADAETRERVARCLSL-----VPQGR---RCAFEFRHPSWYEESAFRILRDHNTALCI------SDHADAPAPWEA----TADFVYVRAHGTNGRYAGSYSAETLQDWTHRIADWRKDE--------------------RSVYVYFDNDIKSAAPGDAQTLLRLVDE 244 The following BLAST results are available for this feature:
BLAST of EWM28487.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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