EWM28502.1, cds2184 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28502.1 vs. NCBI_GenBank
Match: gi|585110918|gb|EWM28502.1| (Essential protein Yae1 [Nannochloropsis gaditana]) HSP 1 Score: 362.844 bits (930), Expect = 6.966e-127 Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0 Query: 1 MTNAEEARHTSSLDLDAVVHLDETWYQEGYQEGGEAGRKRGRREGRAVGKAKGFEIGCELGFYKACSQTWLFVIKDSITGEGEKGRSKEFGEIAAAKAMMDTTAVHRAIRTLEGIIKLVQDFPRQNVADVDMAAHVQRLRAKFRAVTSMLGVSVKFSLHKSGRISDGETAGGVGELSF 178 MTNAEEARHTSSLDLDAVVHLDETWYQEGYQEGGEAGRKRGRREGRAVGKAKGFEIGCELGFYKACSQTWLFVIKDSITGEGEKGRSKEFGEIAAAKAMMDTTAVHRAIRTLEGIIKLVQDFPRQNVADVDMAAHVQRLRAKFRAVTSMLGVSVKFSLHKSGRISDGETAGGVGELSF Sbjct: 1 MTNAEEARHTSSLDLDAVVHLDETWYQEGYQEGGEAGRKRGRREGRAVGKAKGFEIGCELGFYKACSQTWLFVIKDSITGEGEKGRSKEFGEIAAAKAMMDTTAVHRAIRTLEGIIKLVQDFPRQNVADVDMAAHVQRLRAKFRAVTSMLGVSVKFSLHKSGRISDGETAGGVGELSF 178
BLAST of EWM28502.1 vs. NCBI_GenBank
Match: gi|671689669|emb|CDS03986.1| (hypothetical protein LRAMOSA06941 [Lichtheimia ramosa]) HSP 1 Score: 90.5077 bits (223), Expect = 5.168e-20 Identity = 46/164 (28.05%), Postives = 87/164 (53.05%), Query Frame = 0 Query: 1 MTNAEEARHTSSLDLDAVVHLDETWYQEGYQEGGEAGRKRGRREGRAVGKAKGFEIGCELGFYKACSQTWLFVIKDSITGEGEKGRSKEFGEIAAAKAMMDTTAVHRAIRTLEGIIKLVQDFPRQNVADVDMAAHVQRLRAKFRAVTSMLGVSVKFSLHKSGRI 164 M+ + DL+++V+L+E + G+++G G++ G EGR G K FE+G E+G+Y+ C+QTW E+A A ++ V + +++L+ K++ +FPR+N + DM +++AK + +TS+LGV KF++ ++ Sbjct: 1 MSTEPHSEPQMKADLESLVYLEEMFQHYGHEDGLRDGKESGELEGRIFGCEKSFELGVEVGYYEGCAQTWR--------------------ELAEAHGDKVSSKVSKHLQSLQ---KMIDEFPRENCPNTDMYGARDKMKAKMKVITSLLGVRQKFNMEDPPKM 141
BLAST of EWM28502.1 vs. NCBI_GenBank
Match: gi|1032653223|gb|OAQ34494.1| (DUF1715-domain-containing protein [Mortierella elongata AG-77]) HSP 1 Score: 83.9593 bits (206), Expect = 1.920e-17 Identity = 48/157 (30.57%), Postives = 78/157 (49.68%), Query Frame = 0 Query: 1 MTNAEEARHTSSLDLDAVVHLDETWYQEGYQEGGEAGRKRGRREGRAVGKAKGFEIGCELGFYKACSQTWLFVIKDSITGEGEKGRSKEFGEIAAAKAMMDTTAV-HRAIRTLEGIIKLVQDFPRQNVADVDMAAHVQRLRAKFRAVTSMLGVSVKF 156 M N E + LDLDA+VHL+ + + G ++G AG + G EGR +G KGFE+ E+G+Y C+Q W A A D + ++++ + ++ L+ FPRQN D D+ A + ++R KF+ V S L + ++ Sbjct: 1 MANTE-YEISKELDLDALVHLENMFVEFGREDGIAAGERNGAIEGRVMGCEKGFELSREVGYYAGCAQLW------------------------KALAQQDPERISEKSLKKINSLLDLINSFPRQNQLDDDVIALLDKIRGKFKTVASALQTAERY 132
BLAST of EWM28502.1 vs. NCBI_GenBank
Match: gi|242093960|ref|XP_002437470.1| (oral cancer-overexpressed protein 1 homolog [Sorghum bicolor] >gi|1205987173|ref|XP_021305196.1| oral cancer-overexpressed protein 1 homolog [Sorghum bicolor] >gi|1205987175|ref|XP_021305197.1| oral cancer-overexpressed protein 1 homolog [Sorghum bicolor] >gi|241915693|gb|EER88837.1| hypothetical protein SORBI_3010G235200 [Sorghum bicolor]) HSP 1 Score: 83.5741 bits (205), Expect = 2.667e-17 Identity = 48/155 (30.97%), Postives = 74/155 (47.74%), Query Frame = 0 Query: 15 LDAVVHLDETWYQEGYQEGGEAGRKRGRREGRAVGKAKGFEIGCELGFYKACSQTWLFVIKDSITGEGEKGRSKEFGEIAAAKAMMDTTAVHRAIR-TLEGIIKLVQDFPRQNVADVDMAAHVQRLRAKFRAVTSMLGVSVKFSLHKSGRISDGE 168 LD + LDET YQEGY+ G G G+ EGR VG GF++G ELGF++ C W I ++D A +R +E + LV +P + + + ++++R KFRA+T+ LGV +++ H + D E Sbjct: 12 LDPTLLLDETHYQEGYKNGYNDGLASGKEEGRQVGLKMGFQVGEELGFFQGCLDVWTSAI------------------------LIDQNAFSARLRKNIEQLAALVSSYPLSDPENEQIQDVMEKIRLKFRAITASLGVKLEYEGHPTSSKQDVE 142
BLAST of EWM28502.1 vs. NCBI_GenBank
Match: gi|1043296135|gb|OBZ81789.1| (Oral cancer-overexpressed protein 1 [Choanephora cucurbitarum]) HSP 1 Score: 83.1889 bits (204), Expect = 3.174e-17 Identity = 42/151 (27.81%), Postives = 79/151 (52.32%), Query Frame = 0 Query: 15 LDAVVHLDETWYQEGYQEGGEAGRKRGRREGRAVGKAKGFEIGCELGFYKACSQTWLFVIKDSITGEGEKGRSKEFGEIAAAKAMMDTTAVHRAIRTLEGIIKLVQDFPRQNVADVDMAAHVQRLRAKFRAVTSMLGVSVKFSLHKSGRIS 165 ++++ +L+ + + G+ +G G K G EGR G K F++G E+GFY C W E+A ++++ RA++ +EG+ KLV +FP N D D+ A +++ K R ++S+LGV +KF + ++ +++ Sbjct: 12 IESLCYLETMFAEHGFDDGYRDGEKSGELEGRIFGCEKAFDLGKEIGFYAGCVDQW--------------------TELAQQSDLVNS----RALKQIEGLKKLVDEFPSYNDHDADLFAMRDKMKNKLRVISSLLGVQLKFDMTETPKMT 138
BLAST of EWM28502.1 vs. NCBI_GenBank
Match: gi|909127027|gb|KNE54338.1| (hypothetical protein AMAG_00318 [Allomyces macrogynus ATCC 38327]) HSP 1 Score: 84.7297 bits (208), Expect = 3.547e-17 Identity = 47/144 (32.64%), Postives = 80/144 (55.56%), Query Frame = 0 Query: 13 LDLDAVVHLDETWYQEGYQEGGEAGRKRGRREGRAVGKAKGFEIGCELGFYKACSQTWLFVIKDSITGEGEKGRSKEFG--EIAAAKAMMDTTAVHRAIRTLEGIIKLVQDFPRQNVADVDMAAHVQRLRAKFRAVTSMLGVSV 154 +L +VHL+E + +EG +EG G + GR EG +G KG E+ E+ +Y++C++TWL ++ + E S EFG + AA+ + R+ TLE + L + FPR N D + + R+R +++ V ++LGV + Sbjct: 32 FELSDLVHLEEMFQEEGREEGIAEGLRAGRPEGFTLGLEKGHEMLTEVAYYQSCAETWLAHVQRTSIASPE---SNEFGDDDDEAARPSRSRSFPPRSRTTLEVFLTLTRSFPRHNALDTGLIELLDRIRGRWKLVCAVLGVPL 172
BLAST of EWM28502.1 vs. NCBI_GenBank
Match: gi|597940029|ref|XP_007324358.1| (hypothetical protein SERLADRAFT_374841 [Serpula lacrymans var. lacrymans S7.9] >gi|336365412|gb|EGN93763.1| hypothetical protein SERLA73DRAFT_63754 [Serpula lacrymans var. lacrymans S7.3] >gi|336377974|gb|EGO19134.1| hypothetical protein SERLADRAFT_374841 [Serpula lacrymans var. lacrymans S7.9]) HSP 1 Score: 83.5741 bits (205), Expect = 4.653e-17 Identity = 48/148 (32.43%), Postives = 82/148 (55.41%), Query Frame = 0 Query: 13 LDLDAVVHLDETWYQEGYQEGGEAGRKRGRREGRAVGKAKGFEIGCELGFYKACSQTWLFVIKDSITGEGEKGRSKEFGEIAAAKAMMDTTAVHRAIRTLEGIIKLVQDFPRQN--------VADVDMAAHVQRLRAKFRAVTSMLGV 152 DL+++VHL++T++ G+ +G E GR G EGRA+G+ KGFEI ELGFY+ + TWL + + +GRS+E RA+ ++ +++L+ FP N +VD++ ++R++++AV + LGV Sbjct: 5 FDLESLVHLEQTFFDSGHADGFEHGRIHGLIEGRALGREKGFEIWEELGFYEGFANTWLKIYTN-------QGRSEE-----------------RAVHHIKHLLELISQFPSVNPSSQPTPSTPEVDISKLQAQIRSRYKAVCASLGV 128
BLAST of EWM28502.1 vs. NCBI_GenBank
Match: gi|1183498085|gb|ORZ21733.1| (hypothetical protein BCR41DRAFT_385190 [Lobosporangium transversale]) HSP 1 Score: 82.4185 bits (202), Expect = 6.056e-17 Identity = 45/157 (28.66%), Postives = 78/157 (49.68%), Query Frame = 0 Query: 6 EARHTSSLDLDAVVHLDETWYQEGYQEGGEAGRKRGRREGRAVGKAKGFEIGCELGFYKACSQTWLFVIKDSITGEGEKGRSKEFGEIAAAKAMMDTTAV-HRAIRTLEGIIKLVQDFPRQNVADVDMAAHVQRLRAKFRAVTSMLGVSVKFSLHKS 161 E + LDLD +VHL+ + + G ++G AG + G EGR +G KGFE E+G+Y C++ W + A++D + + ++ + ++ L+ FPRQN D D+ A + R+R +F+ V S + S +++ KS Sbjct: 4 EQQLPKELDLDNLVHLENMFVEYGREDGLIAGVRNGVIEGRVMGCEKGFEFSREIGYYAGCAKVW------------------------KSLALLDPERISEKTLKKIGSLLDLINSFPRQNTLDDDIIALLDRIRGRFKTVASAMQTSERYAGPKS 136
BLAST of EWM28502.1 vs. NCBI_GenBank
Match: gi|646310300|gb|KDQ31443.1| (hypothetical protein PLEOSDRAFT_1030488, partial [Pleurotus ostreatus PC15]) HSP 1 Score: 81.2629 bits (199), Expect = 1.331e-16 Identity = 45/146 (30.82%), Postives = 80/146 (54.79%), Query Frame = 0 Query: 13 LDLDAVVHLDETWYQEGYQEGGEAGRKRGRREGRAVGKAKGFEIGCELGFYKACSQTWLFVIKDSITGEGEKGRSKEFGEIAAAKAMMDTTAVHRAIRTLEGIIKLVQDFPRQNV------ADVDMAAHVQRLRAKFRAVTSMLGV 152 DL+++VHL++T+Y +GY++G + GR G EGRA+G+ KGFE+ ELGFY+ + W ++ A+ + D+ R + + +++L+ FPR N ADVD+ +++R++++ + S LGV Sbjct: 2 FDLESLVHLEQTFYDDGYKDGFDHGRIHGLIEGRALGREKGFEMWEELGFYEGFAVLW---------------------KMICARRVGDSN--ERIMNHINQLLQLISQFPRVNPSLTSSSADVDIPKLFRQIRSRYKILCSTLGV 124
BLAST of EWM28502.1 vs. NCBI_GenBank
Match: gi|1070961615|gb|OEL28791.1| (hypothetical protein BAE44_0010191 [Dichanthelium oligosanthes]) HSP 1 Score: 80.8777 bits (198), Expect = 2.665e-16 Identity = 45/143 (31.47%), Postives = 72/143 (50.35%), Query Frame = 0 Query: 15 LDAVVHLDETWYQEGYQEGGEAGRKRGRREGRAVGKAKGFEIGCELGFYKACSQTWLFVIKDSITGEGEKGRSKEFGEIAAAKAMMDTTAVHRAIR-TLEGIIKLVQDFPRQNVADVDMAAHVQRLRAKFRAVTSMLGVSVKF 156 L+ V LDET YQEGY+ G + G G+ EGR VG GF++G ELGFY+ C W+ + +D A +R +E + LV ++P + + + ++++R KFRA+T+ LGV +++ Sbjct: 12 LEPSVLLDETHYQEGYKNGYDDGLSSGKEEGRQVGLKMGFQVGEELGFYQGCLYVWMSATR------------------------IDQNAFSARVRKNIEQLAALVSNYPLSDPENEQVQDVMEKIRLKFRAITASLGVRLEY 130 The following BLAST results are available for this feature:
BLAST of EWM28502.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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