EWM28485.1, cds2170 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM28485.1 vs. NCBI_GenBank
Match: gi|585110901|gb|EWM28485.1| (hypothetical protein Naga_100058g5 [Nannochloropsis gaditana]) HSP 1 Score: 710.679 bits (1833), Expect = 0.000e+0 Identity = 346/346 (100.00%), Postives = 346/346 (100.00%), Query Frame = 0
Query: 1 MIDSSTSVRPSDPRAVAAGVMSGTFQPHQHNTLEDELLGQHIFADLIAAMGASAMVAPFVSVIDKAIIQNQAGAASLESSIVSSFQSLVRDPLTFLRRPEVLMVWTVYGVTYFAANLVNTTSKAYDYQADVPRLLATTTANMGAGIAKDRAYARMFGTVAPRGLPASSYLFFFSRDLVTMGASFNVPEPLAHEMHTKLGVPAGAADVAAQLFCPVAMQFLTTPMHLLGLDLYNRPLSSWRQRYHLIASNYQKTVAARIARILPAFGFGGLGNKKIRQEERAWIKRRQNALHKGKKEPVVVLGRDRHGGEEGLVRQGPDRPTLMPGLLPRPVVPSMLPLPAWAVNTK 346
MIDSSTSVRPSDPRAVAAGVMSGTFQPHQHNTLEDELLGQHIFADLIAAMGASAMVAPFVSVIDKAIIQNQAGAASLESSIVSSFQSLVRDPLTFLRRPEVLMVWTVYGVTYFAANLVNTTSKAYDYQADVPRLLATTTANMGAGIAKDRAYARMFGTVAPRGLPASSYLFFFSRDLVTMGASFNVPEPLAHEMHTKLGVPAGAADVAAQLFCPVAMQFLTTPMHLLGLDLYNRPLSSWRQRYHLIASNYQKTVAARIARILPAFGFGGLGNKKIRQEERAWIKRRQNALHKGKKEPVVVLGRDRHGGEEGLVRQGPDRPTLMPGLLPRPVVPSMLPLPAWAVNTK
Sbjct: 1 MIDSSTSVRPSDPRAVAAGVMSGTFQPHQHNTLEDELLGQHIFADLIAAMGASAMVAPFVSVIDKAIIQNQAGAASLESSIVSSFQSLVRDPLTFLRRPEVLMVWTVYGVTYFAANLVNTTSKAYDYQADVPRLLATTTANMGAGIAKDRAYARMFGTVAPRGLPASSYLFFFSRDLVTMGASFNVPEPLAHEMHTKLGVPAGAADVAAQLFCPVAMQFLTTPMHLLGLDLYNRPLSSWRQRYHLIASNYQKTVAARIARILPAFGFGGLGNKKIRQEERAWIKRRQNALHKGKKEPVVVLGRDRHGGEEGLVRQGPDRPTLMPGLLPRPVVPSMLPLPAWAVNTK 346
BLAST of EWM28485.1 vs. NCBI_GenBank
Match: gi|552927784|gb|ESA11675.1| (hypothetical protein GLOINDRAFT_79841 [Rhizophagus irregularis DAOM 181602] >gi|595492316|gb|EXX75625.1| hypothetical protein RirG_040340 [Rhizophagus irregularis DAOM 197198w]) HSP 1 Score: 216.468 bits (550), Expect = 2.770e-65 Identity = 107/255 (41.96%), Postives = 160/255 (62.75%), Query Frame = 0
Query: 31 NTLEDELLGQHIFADLIAAMGASAMVAPFVSVIDKAIIQNQAGAASLESSIVSSFQSLVRDPLTFLRRPEVLMVWTVYGVTYFAANLVNTTSKAYDYQADVPRLLATTTANMGAGIAKDRAYARMFGTVAPRGLPASSYLFFFSRDLVTMGASFNVPEPLAHEMHTK-LGVPAGAADVAAQLFCPVAMQFLTTPMHLLGLDLYNRPLSSWRQRYHLIASNYQKTVAARIARILPAFGFGGLGNKKIRQEERAWIK 284
+T EL + + DLIAA AS MV+PF++++D++II+N +G L +++ + F +L+ P +R P L+V+ VY TY AN ++T + + + P+ L TT ANM I KDRA+ RMFG VAP+GLP +SY F +RD +T+GASFN+P+ +A E + L + A AAQ+ CP +Q ++ P+HL GLD YNRP S+ R I+ Y KT RI RI PAFG GG+GN+ ++++ +I+
Sbjct: 3 DTKNKELFFKKLGVDLIAAASASFMVSPFITIVDRSIIENTSGRNKLGTALKNGFINLLTRPHRLIRAPSFLLVFGVYFSTYATANTIDTICERLEKDSQTPKFLGTTIANMTTCIFKDRAFTRMFGMVAPKGLPLASYGMFVARDALTIGASFNMPDTVAAEFQKRGLILNDEKAINAAQILCPAVVQLVSCPLHLFGLDYYNRPHVSFASRAGFISKLYIKTTLTRIVRIAPAFGIGGIGNRIVKEKGNQFIQ 257
BLAST of EWM28485.1 vs. NCBI_GenBank
Match: gi|1173929757|gb|OQR82934.1| (hypothetical protein ACHHYP_15310 [Achlya hypogyna]) HSP 1 Score: 214.927 bits (546), Expect = 1.202e-64 Identity = 106/236 (44.92%), Postives = 151/236 (63.98%), Query Frame = 0
Query: 45 DLIAAMGASAMVAPFVSVIDKAIIQNQAGAASLESSIVSSFQSLVRDPLTFLRRPEVLMVWTVYGVTYFAANLVNTTSKAYDYQADVPRLLATTTANMGAGIAKDRAYARMFGTVAPRGLPASSYLFFFSRDLVTMGASFNVPEPLAHEMHTKLGVPAGAADVAAQLFCPVAMQFLTTPMHLLGLDLYNRPLSSWRQRYHLIASNYQKTVAARIARILPAFGFGGLGNKKIRQEER 280
DL +A AS VAPF++ +D+AII+N AGA L+ ++ +R+PL+F+RR E L+++ VY TY +AN V+T + + + P+ L+TT NMGA I KDR + RMFG +AP P +S F RD +T+GASF P LA + ++G G A+ AQL CP+ +QF++TP+HLL LDLYN S +R I+ Y K+ +AR+AR++PAFGFGG+GNK R R
Sbjct: 30 DLASAGIASFFVAPFITTVDRAIIENAAGARPLKQALKEITMDCIRNPLSFIRRKEFLLIYGVYTATYVSANAVDTVCETIEVDSKAPKFLSTTAVNMGACIIKDREFTRMFGVIAPTKFPLASMGLFAIRDSLTVGASFIAPPILAAKFQ-EIGQTPGMANTLAQLTCPMLVQFVSTPLHLLALDLYNHKSSKASERASFISREYIKSTSARVARVVPAFGFGGIGNKYFRDTLR 264
BLAST of EWM28485.1 vs. NCBI_GenBank
Match: gi|673036628|ref|XP_008872275.1| (hypothetical protein H310_08348 [Aphanomyces invadans] >gi|574471841|gb|ETV98847.1| hypothetical protein H310_08348 [Aphanomyces invadans]) HSP 1 Score: 213.386 bits (542), Expect = 4.424e-64 Identity = 102/249 (40.96%), Postives = 157/249 (63.05%), Query Frame = 0
Query: 35 DELLGQHIFADLIAAMGASAMVAPFVSVIDKAIIQNQAGAASLESSIVSSFQSLVRDPLTFLRRPEVLMVWTVYGVTYFAANLVNTTSKAYDYQADVPRLLATTTANMGAGIAKDRAYARMFGTVAPRGLPASSYLFFFSRDLVTMGASFNVPEPLAHEMHTKLGVPAGAADVAAQLFCPVAMQFLTTPMHLLGLDLYNRPLSSWRQRYHLIASNYQKTVAARIARILPAFGFGGLGNKKIRQEERA-W 282
D +G+++ D++AA AS VAPF++ +D+AII+N +G L +++ +R+PL+F+RR E L+++ +Y TY +AN ++T +A ++ +P+ + TT NMG IAKDR +ARMFG +AP P S F RD +T+GASF P +A + + ++ AQ+ CP +Q ++TP+HLL LDLYNR +++ + R ++ Y K+ AARI RI PAFGFGG+GNK R+ RA W
Sbjct: 14 DAAVGRNLAIDVVAAGAASFFVAPFITTVDRAIIENASGKRVLSTALQEISLDFLRNPLSFIRRKEFLLIYGLYTATYLSANAIDTVCEATEHDNKLPKFVGTTAVNMGLCIAKDREFARMFGVIAPAKFPLVSVALFAVRDSMTVGASFVAPPVIASFIESNGFANKSNSNSLAQMLCPAIVQLVSTPLHLLSLDLYNRNVATTQSRVAFVSREYLKSTAARIGRIAPAFGFGGIGNKYFRENLRALW 262
BLAST of EWM28485.1 vs. NCBI_GenBank
Match: gi|929750848|ref|XP_014150407.1| (hypothetical protein SARC_10996 [Sphaeroforma arctica JP610] >gi|906943190|gb|KNC76505.1| hypothetical protein SARC_10996 [Sphaeroforma arctica JP610]) HSP 1 Score: 212.616 bits (540), Expect = 8.869e-64 Identity = 102/241 (42.32%), Postives = 151/241 (62.66%), Query Frame = 0
Query: 38 LGQHIFADLIAAMGASAMVAPFVSVIDKAIIQNQAGAASLESSIVSSFQSLVRDPLTFLRRPEVLMVWTVYGVTYFAANLVNTTSKAYDYQADVPRLLATTTANMGAGIAKDRAYARMFGTVAPRGLPASSYLFFFSRDLVTMGASFNVPEPLAHEMHTKLGVPAGAADVAAQLFCPVAMQFLTTPMHLLGLDLYNRPLSSWRQRYHLIASNYQKTVAARIARILPAFGFGGLGNKKIRQE 278
L + + D+ AA+ A+ V+P ++++D++II N +GA L S++V + L P +F+R + ++W +Y TY AN+V+T S+ + +P+ + TT N IAKDRA+ RMFGT+AP LP SY F RD+ T+GASF++P +A MH + G A AAQL CP+A+Q ++TPMHLLGLDLYN ++ QR + Y K+ AARI+RI PAFG GG+ N+ R+
Sbjct: 22 LAKRVAIDVGAALAAAFCVSPIITIVDRSIIMNASGAQKLGSALVGGVKQLTFTPTSFIRGLDFRLIWGLYTATYVVANVVDTVSELNKKDSAMPKFVVTTAVNGSLCIAKDRAFTRMFGTIAPTSLPIGSYGLFAVRDMATIGASFSLPVKVADHMHDEYGYDRKRALFAAQLLCPMAVQLVSTPMHLLGLDLYNNKTATTSQRASFVGREYLKSTAARISRIAPAFGIGGISNRHFRES 262
BLAST of EWM28485.1 vs. NCBI_GenBank
Match: gi|669165062|ref|XP_008618093.1| (hypothetical protein SDRG_13773 [Saprolegnia diclina VS20] >gi|530730203|gb|EQC28445.1| hypothetical protein SDRG_13773 [Saprolegnia diclina VS20]) HSP 1 Score: 212.616 bits (540), Expect = 1.520e-63 Identity = 106/236 (44.92%), Postives = 149/236 (63.14%), Query Frame = 0
Query: 45 DLIAAMGASAMVAPFVSVIDKAIIQNQAGAASLESSIVSSFQSLVRDPLTFLRRPEVLMVWTVYGVTYFAANLVNTTSKAYDYQADVPRLLATTTANMGAGIAKDRAYARMFGTVAPRGLPASSYLFFFSRDLVTMGASFNVPEPLAHEMHTKLGVPAGAADVAAQLFCPVAMQFLTTPMHLLGLDLYNRPLSSWRQRYHLIASNYQKTVAARIARILPAFGFGGLGNKKIRQEER 280
DL AA AS VAPF++ +D+A+I+N AGA L+ ++V + VR+PL F+RR E L+++ VY TY +AN V++ + + +++P+ L+TT NMGA I KDR + RMFG +AP P S F RD +T+GASF P P+ +LG ++ AQL CP+ +QFL+TP+HLL LDLYN QR I+ Y K+ AR+AR++PAFGFGG+GNK R R
Sbjct: 47 DLAAAGIASFFVAPFITTVDRAVIENAAGARPLKKALVEISRDFVRNPLQFIRRKEFLLIYGVYTATYLSANAVDSLCETVEVDSNMPKFLSTTAVNMGACIIKDREFTRMFGVIAPTKFPLMSMGLFAIRDSLTVGASFIAP-PILSAKFQELGQTPRTSNTLAQLTCPMLVQFLSTPLHLLSLDLYNNKGVPMNQRMSFISREYIKSTGARVARVVPAFGFGGIGNKYFRDTMR 281
BLAST of EWM28485.1 vs. NCBI_GenBank
Match: gi|813189501|ref|XP_012207551.1| (hypothetical protein SPRG_13165 [Saprolegnia parasitica CBS 223.65] >gi|641527462|gb|KDO21749.1| hypothetical protein SPRG_13165 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 211.846 bits (538), Expect = 1.838e-63 Identity = 105/239 (43.93%), Postives = 151/239 (63.18%), Query Frame = 0
Query: 45 DLIAAMGASAMVAPFVSVIDKAIIQNQAGAASLESSIVSSFQSLVRDPLTFLRRPEVLMVWTVYGVTYFAANLVNTTSKAYDYQADVPRLLATTTANMGAGIAKDRAYARMFGTVAPRGLPASSYLFFFSRDLVTMGASFNVPEPLAHEMHTKLGVPAGAADVAAQLFCPVAMQFLTTPMHLLGLDLYNRPLSSWRQRYHLIASNYQKTVAARIARILPAFGFGGLGNKKIRQEERAWI 283
DL AA AS VAPF++ +D+A+I+N AGA L+ +++ + +R+PL F+RR E L+++ VY TY +AN V+T + + +++P+ L+TT NMGA I KDR + RMFG +AP P S F RD +T+GASF P P+ +LG ++ AQL CP+ +QFL+TP+HLL LDLYN + R I+ Y K+ AR+AR++PAFGFGG+GNK R RA +
Sbjct: 27 DLAAAGLASFFVAPFITTVDRAVIENAAGARPLKKALIEISKDCIRNPLQFIRRKEFLLIYGVYTATYLSANGVDTLCETAEVDSNMPKFLSTTAVNMGACIIKDREFTRMFGVIAPTKFPLMSMGLFAIRDSLTVGASFIAP-PILSAKFQELGQTPRTSNTLAQLTCPMLVQFLSTPLHLLSLDLYNNKGVAMGDRMSFISREYLKSTTARVARVVPAFGFGGIGNKYFRDTMRAKL 264
BLAST of EWM28485.1 vs. NCBI_GenBank
Match: gi|1173959620|gb|OQS05834.1| (hypothetical protein THRCLA_02077 [Thraustotheca clavata]) HSP 1 Score: 211.075 bits (536), Expect = 3.584e-63 Identity = 104/236 (44.07%), Postives = 148/236 (62.71%), Query Frame = 0
Query: 45 DLIAAMGASAMVAPFVSVIDKAIIQNQAGAASLESSIVSSFQSLVRDPLTFLRRPEVLMVWTVYGVTYFAANLVNTTSKAYDYQADVPRLLATTTANMGAGIAKDRAYARMFGTVAPRGLPASSYLFFFSRDLVTMGASFNVPEPLAHEMHTKLGVPAGAADVAAQLFCPVAMQFLTTPMHLLGLDLYNRPLSSWRQRYHLIASNYQKTVAARIARILPAFGFGGLGNKKIRQEER 280
D+ AA AS VAPF++ +D+AII+N AGA L+ +++ VR+P F+RR E L+++ VY TY +AN V+T +A + + +P+ +TT NM A I KDR + RMFG +AP P S F RD +T+GASF P L+ + P+ + + AQL CP+ +QF++TP+HLL LDLYN SS +R I+ Y K+ AAR+AR++PAFGFGG+GNK R R
Sbjct: 28 DVAAAGAASFFVAPFITTVDRAIIENAAGARPLKRALIEISMDFVRNPFKFVRRKEFLLIYGVYTATYVSANAVDTICEAAEADSKMPKFFSTTAVNMAACILKDREFTRMFGVIAPTNFPPLSMALFAVRDSLTVGASFIAPPYLSKKFQEHGQTPSTSNSL-AQLICPMMVQFVSTPLHLLSLDLYNHKDSSTNKRMSFISREYFKSTAARVARVVPAFGFGGIGNKYFRDSMR 262
BLAST of EWM28485.1 vs. NCBI_GenBank
Match: gi|953500188|emb|CEG38829.1| (hypothetical protein PHALS_08880 [Plasmopara halstedii]) HSP 1 Score: 207.223 bits (526), Expect = 9.610e-62 Identity = 109/266 (40.98%), Postives = 157/266 (59.02%), Query Frame = 0
Query: 21 MSGTF--QPHQHNTLEDELLGQHIFADLIAAMGASAMVAPFVSVIDKAIIQNQAGAASLESSIVSSFQSLVRDPLTFLRRPEVLMVWTVYGVTYFAANLVNTTSKAYDYQADVPRLLATTTANMGAGIAKDRAYARMFGTVAPRGLPASSYLFFFSRDLVTMGASFNVPEPLAHEMHTKLGVPAGAADVAAQLFCPVAMQFLTTPMHLLGLDLYNRPLSSWRQRYHLIASNYQKTVAARIARILPAFGFGGLGNKKIRQEERAWIK 284
M TF QP Q + L + + D +AA+ AS VAPF++++D+AII+N +GA L + +++PL F+ + E +++ +Y TY AN+V++ + D + +P+ TT NM IAKDRA+ARMFG +AP P +S F RD +T GASFN P+ LA ++ + +A AQL CP A+QF++TP+HLLGLDLYN + QR I Y K+V ARI RI PAFG GG+GN +R RA ++
Sbjct: 1 MEKTFDDQPQQGSVK----LVERLVIDTVAAIAASLGVAPFITIVDRAIIENASGARPLGRGLKELSIDFLKNPLRFIGKREFHLIFGLYTATYATANIVDSVCELADTDSQMPKFFGTTAVNMSLCIAKDRAFARMFGVIAPGAFPLASIGLFAVRDSLTCGASFNAPKVLAKKLEDNQLMEKSSASTFAQLICPAAVQFVSTPLHLLGLDLYNNKGHAVTQRIGFIQREYVKSVLARIGRIGPAFGIGGVGNSYVRNTLRAGLE 262
BLAST of EWM28485.1 vs. NCBI_GenBank
Match: gi|695431968|ref|XP_009530820.1| (hypothetical protein PHYSODRAFT_351914 [Phytophthora sojae] >gi|348673572|gb|EGZ13391.1| hypothetical protein PHYSODRAFT_351914 [Phytophthora sojae]) HSP 1 Score: 206.068 bits (523), Expect = 3.348e-61 Identity = 103/247 (41.70%), Postives = 149/247 (60.32%), Query Frame = 0
Query: 38 LGQHIFADLIAAMGASAMVAPFVSVIDKAIIQNQAGAASLESSIVSSFQSLVRDPLTFLRRPEVLMVWTVYGVTYFAANLVNTTSKAYDYQADVPRLLATTTANMGAGIAKDRAYARMFGTVAPRGLPASSYLFFFSRDLVTMGASFNVPEPLAHEMHTKLGVPAGAADVAAQLFCPVAMQFLTTPMHLLGLDLYNRPLSSWRQRYHLIASNYQKTVAARIARILPAFGFGGLGNKKIRQEERAWIK 284
L + + AD +AAM AS VAPF++++D+AII+N +GA L + ++ PL F+ + E +++ +Y TY AN+V++ + + +P+ + TT NM IAKDRA+ARMFG +AP P +S F RD +T GASFN P+ LA ++ + G A AQL CP A+QFL+TP+HL+GLDLYN + QR + Y K+V AR+ RI PAFG GG+GN R RA ++
Sbjct: 18 LAKQLVADTVAAMAASLGVAPFITIVDRAIIENASGARPLGRGLKELSVEFLKHPLRFVGKREFHLIFGLYTATYVTANVVDSVCEYAEADNQMPKFIGTTAVNMSLCIAKDRAFARMFGVIAPAAFPLTSIGLFAVRDSMTCGASFNAPKVLAKKIEDNGLMEKGNASTFAQLVCPAAVQFLSTPLHLMGLDLYNNKGHAMAQRVSFVQREYVKSVFARVGRIGPAFGIGGVGNTYFRNSLRAKLE 264 The following BLAST results are available for this feature:
BLAST of EWM28485.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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