EWM28485.1, cds2170 (CDS) Nannochloropsis gaditana

Overview
NameEWM28485.1
Unique Namecds2170
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:1077237..1077418 +
Alignment locationCM002458.1:1077585..1078032 +
Alignment locationCM002458.1:1078180..1078590 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM28485.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100058g5.4252.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:1077237..1077418 +
CM002458.1supercontigCM002458.1:1077585..1078032 +
CM002458.1supercontigCM002458.1:1078180..1078590 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
BLAST of EWM28485.1 vs. NCBI_GenBank
Match: gi|585110901|gb|EWM28485.1| (hypothetical protein Naga_100058g5 [Nannochloropsis gaditana])

HSP 1 Score: 710.679 bits (1833), Expect = 0.000e+0
Identity = 346/346 (100.00%), Postives = 346/346 (100.00%), Query Frame = 0
Query:    1 MIDSSTSVRPSDPRAVAAGVMSGTFQPHQHNTLEDELLGQHIFADLIAAMGASAMVAPFVSVIDKAIIQNQAGAASLESSIVSSFQSLVRDPLTFLRRPEVLMVWTVYGVTYFAANLVNTTSKAYDYQADVPRLLATTTANMGAGIAKDRAYARMFGTVAPRGLPASSYLFFFSRDLVTMGASFNVPEPLAHEMHTKLGVPAGAADVAAQLFCPVAMQFLTTPMHLLGLDLYNRPLSSWRQRYHLIASNYQKTVAARIARILPAFGFGGLGNKKIRQEERAWIKRRQNALHKGKKEPVVVLGRDRHGGEEGLVRQGPDRPTLMPGLLPRPVVPSMLPLPAWAVNTK 346
            MIDSSTSVRPSDPRAVAAGVMSGTFQPHQHNTLEDELLGQHIFADLIAAMGASAMVAPFVSVIDKAIIQNQAGAASLESSIVSSFQSLVRDPLTFLRRPEVLMVWTVYGVTYFAANLVNTTSKAYDYQADVPRLLATTTANMGAGIAKDRAYARMFGTVAPRGLPASSYLFFFSRDLVTMGASFNVPEPLAHEMHTKLGVPAGAADVAAQLFCPVAMQFLTTPMHLLGLDLYNRPLSSWRQRYHLIASNYQKTVAARIARILPAFGFGGLGNKKIRQEERAWIKRRQNALHKGKKEPVVVLGRDRHGGEEGLVRQGPDRPTLMPGLLPRPVVPSMLPLPAWAVNTK
Sbjct:    1 MIDSSTSVRPSDPRAVAAGVMSGTFQPHQHNTLEDELLGQHIFADLIAAMGASAMVAPFVSVIDKAIIQNQAGAASLESSIVSSFQSLVRDPLTFLRRPEVLMVWTVYGVTYFAANLVNTTSKAYDYQADVPRLLATTTANMGAGIAKDRAYARMFGTVAPRGLPASSYLFFFSRDLVTMGASFNVPEPLAHEMHTKLGVPAGAADVAAQLFCPVAMQFLTTPMHLLGLDLYNRPLSSWRQRYHLIASNYQKTVAARIARILPAFGFGGLGNKKIRQEERAWIKRRQNALHKGKKEPVVVLGRDRHGGEEGLVRQGPDRPTLMPGLLPRPVVPSMLPLPAWAVNTK 346          
BLAST of EWM28485.1 vs. NCBI_GenBank
Match: gi|552927784|gb|ESA11675.1| (hypothetical protein GLOINDRAFT_79841 [Rhizophagus irregularis DAOM 181602] >gi|595492316|gb|EXX75625.1| hypothetical protein RirG_040340 [Rhizophagus irregularis DAOM 197198w])

HSP 1 Score: 216.468 bits (550), Expect = 2.770e-65
Identity = 107/255 (41.96%), Postives = 160/255 (62.75%), Query Frame = 0
Query:   31 NTLEDELLGQHIFADLIAAMGASAMVAPFVSVIDKAIIQNQAGAASLESSIVSSFQSLVRDPLTFLRRPEVLMVWTVYGVTYFAANLVNTTSKAYDYQADVPRLLATTTANMGAGIAKDRAYARMFGTVAPRGLPASSYLFFFSRDLVTMGASFNVPEPLAHEMHTK-LGVPAGAADVAAQLFCPVAMQFLTTPMHLLGLDLYNRPLSSWRQRYHLIASNYQKTVAARIARILPAFGFGGLGNKKIRQEERAWIK 284
            +T   EL  + +  DLIAA  AS MV+PF++++D++II+N +G   L +++ + F +L+  P   +R P  L+V+ VY  TY  AN ++T  +  +  +  P+ L TT ANM   I KDRA+ RMFG VAP+GLP +SY  F +RD +T+GASFN+P+ +A E   + L +    A  AAQ+ CP  +Q ++ P+HL GLD YNRP  S+  R   I+  Y KT   RI RI PAFG GG+GN+ ++++   +I+
Sbjct:    3 DTKNKELFFKKLGVDLIAAASASFMVSPFITIVDRSIIENTSGRNKLGTALKNGFINLLTRPHRLIRAPSFLLVFGVYFSTYATANTIDTICERLEKDSQTPKFLGTTIANMTTCIFKDRAFTRMFGMVAPKGLPLASYGMFVARDALTIGASFNMPDTVAAEFQKRGLILNDEKAINAAQILCPAVVQLVSCPLHLFGLDYYNRPHVSFASRAGFISKLYIKTTLTRIVRIAPAFGIGGIGNRIVKEKGNQFIQ 257          
BLAST of EWM28485.1 vs. NCBI_GenBank
Match: gi|1173929757|gb|OQR82934.1| (hypothetical protein ACHHYP_15310 [Achlya hypogyna])

HSP 1 Score: 214.927 bits (546), Expect = 1.202e-64
Identity = 106/236 (44.92%), Postives = 151/236 (63.98%), Query Frame = 0
Query:   45 DLIAAMGASAMVAPFVSVIDKAIIQNQAGAASLESSIVSSFQSLVRDPLTFLRRPEVLMVWTVYGVTYFAANLVNTTSKAYDYQADVPRLLATTTANMGAGIAKDRAYARMFGTVAPRGLPASSYLFFFSRDLVTMGASFNVPEPLAHEMHTKLGVPAGAADVAAQLFCPVAMQFLTTPMHLLGLDLYNRPLSSWRQRYHLIASNYQKTVAARIARILPAFGFGGLGNKKIRQEER 280
            DL +A  AS  VAPF++ +D+AII+N AGA  L+ ++       +R+PL+F+RR E L+++ VY  TY +AN V+T  +  +  +  P+ L+TT  NMGA I KDR + RMFG +AP   P +S   F  RD +T+GASF  P  LA +   ++G   G A+  AQL CP+ +QF++TP+HLL LDLYN   S   +R   I+  Y K+ +AR+AR++PAFGFGG+GNK  R   R
Sbjct:   30 DLASAGIASFFVAPFITTVDRAIIENAAGARPLKQALKEITMDCIRNPLSFIRRKEFLLIYGVYTATYVSANAVDTVCETIEVDSKAPKFLSTTAVNMGACIIKDREFTRMFGVIAPTKFPLASMGLFAIRDSLTVGASFIAPPILAAKFQ-EIGQTPGMANTLAQLTCPMLVQFVSTPLHLLALDLYNHKSSKASERASFISREYIKSTSARVARVVPAFGFGGIGNKYFRDTLR 264          
BLAST of EWM28485.1 vs. NCBI_GenBank
Match: gi|673036628|ref|XP_008872275.1| (hypothetical protein H310_08348 [Aphanomyces invadans] >gi|574471841|gb|ETV98847.1| hypothetical protein H310_08348 [Aphanomyces invadans])

HSP 1 Score: 213.386 bits (542), Expect = 4.424e-64
Identity = 102/249 (40.96%), Postives = 157/249 (63.05%), Query Frame = 0
Query:   35 DELLGQHIFADLIAAMGASAMVAPFVSVIDKAIIQNQAGAASLESSIVSSFQSLVRDPLTFLRRPEVLMVWTVYGVTYFAANLVNTTSKAYDYQADVPRLLATTTANMGAGIAKDRAYARMFGTVAPRGLPASSYLFFFSRDLVTMGASFNVPEPLAHEMHTKLGVPAGAADVAAQLFCPVAMQFLTTPMHLLGLDLYNRPLSSWRQRYHLIASNYQKTVAARIARILPAFGFGGLGNKKIRQEERA-W 282
            D  +G+++  D++AA  AS  VAPF++ +D+AII+N +G   L +++       +R+PL+F+RR E L+++ +Y  TY +AN ++T  +A ++   +P+ + TT  NMG  IAKDR +ARMFG +AP   P  S   F  RD +T+GASF  P  +A  + +        ++  AQ+ CP  +Q ++TP+HLL LDLYNR +++ + R   ++  Y K+ AARI RI PAFGFGG+GNK  R+  RA W
Sbjct:   14 DAAVGRNLAIDVVAAGAASFFVAPFITTVDRAIIENASGKRVLSTALQEISLDFLRNPLSFIRRKEFLLIYGLYTATYLSANAIDTVCEATEHDNKLPKFVGTTAVNMGLCIAKDREFARMFGVIAPAKFPLVSVALFAVRDSMTVGASFVAPPVIASFIESNGFANKSNSNSLAQMLCPAIVQLVSTPLHLLSLDLYNRNVATTQSRVAFVSREYLKSTAARIGRIAPAFGFGGIGNKYFRENLRALW 262          
BLAST of EWM28485.1 vs. NCBI_GenBank
Match: gi|929750848|ref|XP_014150407.1| (hypothetical protein SARC_10996 [Sphaeroforma arctica JP610] >gi|906943190|gb|KNC76505.1| hypothetical protein SARC_10996 [Sphaeroforma arctica JP610])

HSP 1 Score: 212.616 bits (540), Expect = 8.869e-64
Identity = 102/241 (42.32%), Postives = 151/241 (62.66%), Query Frame = 0
Query:   38 LGQHIFADLIAAMGASAMVAPFVSVIDKAIIQNQAGAASLESSIVSSFQSLVRDPLTFLRRPEVLMVWTVYGVTYFAANLVNTTSKAYDYQADVPRLLATTTANMGAGIAKDRAYARMFGTVAPRGLPASSYLFFFSRDLVTMGASFNVPEPLAHEMHTKLGVPAGAADVAAQLFCPVAMQFLTTPMHLLGLDLYNRPLSSWRQRYHLIASNYQKTVAARIARILPAFGFGGLGNKKIRQE 278
            L + +  D+ AA+ A+  V+P ++++D++II N +GA  L S++V   + L   P +F+R  +  ++W +Y  TY  AN+V+T S+     + +P+ + TT  N    IAKDRA+ RMFGT+AP  LP  SY  F  RD+ T+GASF++P  +A  MH + G     A  AAQL CP+A+Q ++TPMHLLGLDLYN   ++  QR   +   Y K+ AARI+RI PAFG GG+ N+  R+ 
Sbjct:   22 LAKRVAIDVGAALAAAFCVSPIITIVDRSIIMNASGAQKLGSALVGGVKQLTFTPTSFIRGLDFRLIWGLYTATYVVANVVDTVSELNKKDSAMPKFVVTTAVNGSLCIAKDRAFTRMFGTIAPTSLPIGSYGLFAVRDMATIGASFSLPVKVADHMHDEYGYDRKRALFAAQLLCPMAVQLVSTPMHLLGLDLYNNKTATTSQRASFVGREYLKSTAARISRIAPAFGIGGISNRHFRES 262          
BLAST of EWM28485.1 vs. NCBI_GenBank
Match: gi|669165062|ref|XP_008618093.1| (hypothetical protein SDRG_13773 [Saprolegnia diclina VS20] >gi|530730203|gb|EQC28445.1| hypothetical protein SDRG_13773 [Saprolegnia diclina VS20])

HSP 1 Score: 212.616 bits (540), Expect = 1.520e-63
Identity = 106/236 (44.92%), Postives = 149/236 (63.14%), Query Frame = 0
Query:   45 DLIAAMGASAMVAPFVSVIDKAIIQNQAGAASLESSIVSSFQSLVRDPLTFLRRPEVLMVWTVYGVTYFAANLVNTTSKAYDYQADVPRLLATTTANMGAGIAKDRAYARMFGTVAPRGLPASSYLFFFSRDLVTMGASFNVPEPLAHEMHTKLGVPAGAADVAAQLFCPVAMQFLTTPMHLLGLDLYNRPLSSWRQRYHLIASNYQKTVAARIARILPAFGFGGLGNKKIRQEER 280
            DL AA  AS  VAPF++ +D+A+I+N AGA  L+ ++V   +  VR+PL F+RR E L+++ VY  TY +AN V++  +  +  +++P+ L+TT  NMGA I KDR + RMFG +AP   P  S   F  RD +T+GASF  P P+      +LG     ++  AQL CP+ +QFL+TP+HLL LDLYN       QR   I+  Y K+  AR+AR++PAFGFGG+GNK  R   R
Sbjct:   47 DLAAAGIASFFVAPFITTVDRAVIENAAGARPLKKALVEISRDFVRNPLQFIRRKEFLLIYGVYTATYLSANAVDSLCETVEVDSNMPKFLSTTAVNMGACIIKDREFTRMFGVIAPTKFPLMSMGLFAIRDSLTVGASFIAP-PILSAKFQELGQTPRTSNTLAQLTCPMLVQFLSTPLHLLSLDLYNNKGVPMNQRMSFISREYIKSTGARVARVVPAFGFGGIGNKYFRDTMR 281          
BLAST of EWM28485.1 vs. NCBI_GenBank
Match: gi|813189501|ref|XP_012207551.1| (hypothetical protein SPRG_13165 [Saprolegnia parasitica CBS 223.65] >gi|641527462|gb|KDO21749.1| hypothetical protein SPRG_13165 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 211.846 bits (538), Expect = 1.838e-63
Identity = 105/239 (43.93%), Postives = 151/239 (63.18%), Query Frame = 0
Query:   45 DLIAAMGASAMVAPFVSVIDKAIIQNQAGAASLESSIVSSFQSLVRDPLTFLRRPEVLMVWTVYGVTYFAANLVNTTSKAYDYQADVPRLLATTTANMGAGIAKDRAYARMFGTVAPRGLPASSYLFFFSRDLVTMGASFNVPEPLAHEMHTKLGVPAGAADVAAQLFCPVAMQFLTTPMHLLGLDLYNRPLSSWRQRYHLIASNYQKTVAARIARILPAFGFGGLGNKKIRQEERAWI 283
            DL AA  AS  VAPF++ +D+A+I+N AGA  L+ +++   +  +R+PL F+RR E L+++ VY  TY +AN V+T  +  +  +++P+ L+TT  NMGA I KDR + RMFG +AP   P  S   F  RD +T+GASF  P P+      +LG     ++  AQL CP+ +QFL+TP+HLL LDLYN    +   R   I+  Y K+  AR+AR++PAFGFGG+GNK  R   RA +
Sbjct:   27 DLAAAGLASFFVAPFITTVDRAVIENAAGARPLKKALIEISKDCIRNPLQFIRRKEFLLIYGVYTATYLSANGVDTLCETAEVDSNMPKFLSTTAVNMGACIIKDREFTRMFGVIAPTKFPLMSMGLFAIRDSLTVGASFIAP-PILSAKFQELGQTPRTSNTLAQLTCPMLVQFLSTPLHLLSLDLYNNKGVAMGDRMSFISREYLKSTTARVARVVPAFGFGGIGNKYFRDTMRAKL 264          
BLAST of EWM28485.1 vs. NCBI_GenBank
Match: gi|1173959620|gb|OQS05834.1| (hypothetical protein THRCLA_02077 [Thraustotheca clavata])

HSP 1 Score: 211.075 bits (536), Expect = 3.584e-63
Identity = 104/236 (44.07%), Postives = 148/236 (62.71%), Query Frame = 0
Query:   45 DLIAAMGASAMVAPFVSVIDKAIIQNQAGAASLESSIVSSFQSLVRDPLTFLRRPEVLMVWTVYGVTYFAANLVNTTSKAYDYQADVPRLLATTTANMGAGIAKDRAYARMFGTVAPRGLPASSYLFFFSRDLVTMGASFNVPEPLAHEMHTKLGVPAGAADVAAQLFCPVAMQFLTTPMHLLGLDLYNRPLSSWRQRYHLIASNYQKTVAARIARILPAFGFGGLGNKKIRQEER 280
            D+ AA  AS  VAPF++ +D+AII+N AGA  L+ +++      VR+P  F+RR E L+++ VY  TY +AN V+T  +A +  + +P+  +TT  NM A I KDR + RMFG +AP   P  S   F  RD +T+GASF  P  L+ +       P+ +  + AQL CP+ +QF++TP+HLL LDLYN   SS  +R   I+  Y K+ AAR+AR++PAFGFGG+GNK  R   R
Sbjct:   28 DVAAAGAASFFVAPFITTVDRAIIENAAGARPLKRALIEISMDFVRNPFKFVRRKEFLLIYGVYTATYVSANAVDTICEAAEADSKMPKFFSTTAVNMAACILKDREFTRMFGVIAPTNFPPLSMALFAVRDSLTVGASFIAPPYLSKKFQEHGQTPSTSNSL-AQLICPMMVQFVSTPLHLLSLDLYNHKDSSTNKRMSFISREYFKSTAARVARVVPAFGFGGIGNKYFRDSMR 262          
BLAST of EWM28485.1 vs. NCBI_GenBank
Match: gi|953500188|emb|CEG38829.1| (hypothetical protein PHALS_08880 [Plasmopara halstedii])

HSP 1 Score: 207.223 bits (526), Expect = 9.610e-62
Identity = 109/266 (40.98%), Postives = 157/266 (59.02%), Query Frame = 0
Query:   21 MSGTF--QPHQHNTLEDELLGQHIFADLIAAMGASAMVAPFVSVIDKAIIQNQAGAASLESSIVSSFQSLVRDPLTFLRRPEVLMVWTVYGVTYFAANLVNTTSKAYDYQADVPRLLATTTANMGAGIAKDRAYARMFGTVAPRGLPASSYLFFFSRDLVTMGASFNVPEPLAHEMHTKLGVPAGAADVAAQLFCPVAMQFLTTPMHLLGLDLYNRPLSSWRQRYHLIASNYQKTVAARIARILPAFGFGGLGNKKIRQEERAWIK 284
            M  TF  QP Q +      L + +  D +AA+ AS  VAPF++++D+AII+N +GA  L   +       +++PL F+ + E  +++ +Y  TY  AN+V++  +  D  + +P+   TT  NM   IAKDRA+ARMFG +AP   P +S   F  RD +T GASFN P+ LA ++     +   +A   AQL CP A+QF++TP+HLLGLDLYN    +  QR   I   Y K+V ARI RI PAFG GG+GN  +R   RA ++
Sbjct:    1 MEKTFDDQPQQGSVK----LVERLVIDTVAAIAASLGVAPFITIVDRAIIENASGARPLGRGLKELSIDFLKNPLRFIGKREFHLIFGLYTATYATANIVDSVCELADTDSQMPKFFGTTAVNMSLCIAKDRAFARMFGVIAPGAFPLASIGLFAVRDSLTCGASFNAPKVLAKKLEDNQLMEKSSASTFAQLICPAAVQFVSTPLHLLGLDLYNNKGHAVTQRIGFIQREYVKSVLARIGRIGPAFGIGGVGNSYVRNTLRAGLE 262          
BLAST of EWM28485.1 vs. NCBI_GenBank
Match: gi|695431968|ref|XP_009530820.1| (hypothetical protein PHYSODRAFT_351914 [Phytophthora sojae] >gi|348673572|gb|EGZ13391.1| hypothetical protein PHYSODRAFT_351914 [Phytophthora sojae])

HSP 1 Score: 206.068 bits (523), Expect = 3.348e-61
Identity = 103/247 (41.70%), Postives = 149/247 (60.32%), Query Frame = 0
Query:   38 LGQHIFADLIAAMGASAMVAPFVSVIDKAIIQNQAGAASLESSIVSSFQSLVRDPLTFLRRPEVLMVWTVYGVTYFAANLVNTTSKAYDYQADVPRLLATTTANMGAGIAKDRAYARMFGTVAPRGLPASSYLFFFSRDLVTMGASFNVPEPLAHEMHTKLGVPAGAADVAAQLFCPVAMQFLTTPMHLLGLDLYNRPLSSWRQRYHLIASNYQKTVAARIARILPAFGFGGLGNKKIRQEERAWIK 284
            L + + AD +AAM AS  VAPF++++D+AII+N +GA  L   +       ++ PL F+ + E  +++ +Y  TY  AN+V++  +  +    +P+ + TT  NM   IAKDRA+ARMFG +AP   P +S   F  RD +T GASFN P+ LA ++     +  G A   AQL CP A+QFL+TP+HL+GLDLYN    +  QR   +   Y K+V AR+ RI PAFG GG+GN   R   RA ++
Sbjct:   18 LAKQLVADTVAAMAASLGVAPFITIVDRAIIENASGARPLGRGLKELSVEFLKHPLRFVGKREFHLIFGLYTATYVTANVVDSVCEYAEADNQMPKFIGTTAVNMSLCIAKDRAFARMFGVIAPAAFPLTSIGLFAVRDSMTCGASFNAPKVLAKKIEDNGLMEKGNASTFAQLVCPAAVQFLSTPLHLMGLDLYNNKGHAMAQRVSFVQREYVKSVFARVGRIGPAFGIGGVGNTYFRNSLRAKLE 264          
The following BLAST results are available for this feature:
BLAST of EWM28485.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585110901|gb|EWM28485.1|0.000e+0100.00hypothetical protein Naga_100058g5 [Nannochloropsi... [more]
gi|552927784|gb|ESA11675.1|2.770e-6541.96hypothetical protein GLOINDRAFT_79841 [Rhizophagus... [more]
gi|1173929757|gb|OQR82934.1|1.202e-6444.92hypothetical protein ACHHYP_15310 [Achlya hypogyna... [more]
gi|673036628|ref|XP_008872275.1|4.424e-6440.96hypothetical protein H310_08348 [Aphanomyces invad... [more]
gi|929750848|ref|XP_014150407.1|8.869e-6442.32hypothetical protein SARC_10996 [Sphaeroforma arct... [more]
gi|669165062|ref|XP_008618093.1|1.520e-6344.92hypothetical protein SDRG_13773 [Saprolegnia dicli... [more]
gi|813189501|ref|XP_012207551.1|1.838e-6343.93hypothetical protein SPRG_13165 [Saprolegnia paras... [more]
gi|1173959620|gb|OQS05834.1|3.584e-6344.07hypothetical protein THRCLA_02077 [Thraustotheca c... [more]
gi|953500188|emb|CEG38829.1|9.610e-6240.98hypothetical protein PHALS_08880 [Plasmopara halst... [more]
gi|695431968|ref|XP_009530820.1|3.348e-6141.70hypothetical protein PHYSODRAFT_351914 [Phytophtho... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2178rna2178Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications