EWM30456.1, cds216 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30456.1 vs. NCBI_GenBank
Match: gi|585113119|gb|EWM30456.1| (zinc finger ccch type domain-containing protein zfn-like 3 [Nannochloropsis gaditana]) HSP 1 Score: 755.362 bits (1949), Expect = 0.000e+0 Identity = 374/374 (100.00%), Postives = 374/374 (100.00%), Query Frame = 0
Query: 1 MFLGHATGEEDGVGAVCYPQRPGELECQYYMKTGTCKYATKCKFHHPPDVTPTWGTVAPATDVTIGLNKESYPRRPGEQQCTFFLKTGTCKYKMSCKFDHPPEAIQQTLQLQATPYPMRPGELQCSYYLKTGKCKFGATCRFDHPAMAPEHATALAAGQYAGAGGAGGMNGHVGGAAGMHAMLAMGRVGMGYYEGTAGGGMLDMMGLPGQQMLANFGAGAPLAQLPQRPGEKECTFFLRTGRCQYGPRCKFHHPLDKLQGALMGLNGVHGGPHLSHPHVTGLHAPGFGHPGLEGLYSPYALPASGPAGLSHAGHLAMRAGAGGLGSSGAGGEGKGRCPCALVRSRVPFICGPGNARTAPPVGSTTPVWAEWRGN 374
MFLGHATGEEDGVGAVCYPQRPGELECQYYMKTGTCKYATKCKFHHPPDVTPTWGTVAPATDVTIGLNKESYPRRPGEQQCTFFLKTGTCKYKMSCKFDHPPEAIQQTLQLQATPYPMRPGELQCSYYLKTGKCKFGATCRFDHPAMAPEHATALAAGQYAGAGGAGGMNGHVGGAAGMHAMLAMGRVGMGYYEGTAGGGMLDMMGLPGQQMLANFGAGAPLAQLPQRPGEKECTFFLRTGRCQYGPRCKFHHPLDKLQGALMGLNGVHGGPHLSHPHVTGLHAPGFGHPGLEGLYSPYALPASGPAGLSHAGHLAMRAGAGGLGSSGAGGEGKGRCPCALVRSRVPFICGPGNARTAPPVGSTTPVWAEWRGN
Sbjct: 1 MFLGHATGEEDGVGAVCYPQRPGELECQYYMKTGTCKYATKCKFHHPPDVTPTWGTVAPATDVTIGLNKESYPRRPGEQQCTFFLKTGTCKYKMSCKFDHPPEAIQQTLQLQATPYPMRPGELQCSYYLKTGKCKFGATCRFDHPAMAPEHATALAAGQYAGAGGAGGMNGHVGGAAGMHAMLAMGRVGMGYYEGTAGGGMLDMMGLPGQQMLANFGAGAPLAQLPQRPGEKECTFFLRTGRCQYGPRCKFHHPLDKLQGALMGLNGVHGGPHLSHPHVTGLHAPGFGHPGLEGLYSPYALPASGPAGLSHAGHLAMRAGAGGLGSSGAGGEGKGRCPCALVRSRVPFICGPGNARTAPPVGSTTPVWAEWRGN 374
BLAST of EWM30456.1 vs. NCBI_GenBank
Match: gi|585113120|gb|EWM30457.1| (zinc finger ccch type domain-containing protein zfn-like 3 [Nannochloropsis gaditana]) HSP 1 Score: 559.296 bits (1440), Expect = 0.000e+0 Identity = 281/281 (100.00%), Postives = 281/281 (100.00%), Query Frame = 0
Query: 94 MSCKFDHPPEAIQQTLQLQATPYPMRPGELQCSYYLKTGKCKFGATCRFDHPAMAPEHATALAAGQYAGAGGAGGMNGHVGGAAGMHAMLAMGRVGMGYYEGTAGGGMLDMMGLPGQQMLANFGAGAPLAQLPQRPGEKECTFFLRTGRCQYGPRCKFHHPLDKLQGALMGLNGVHGGPHLSHPHVTGLHAPGFGHPGLEGLYSPYALPASGPAGLSHAGHLAMRAGAGGLGSSGAGGEGKGRCPCALVRSRVPFICGPGNARTAPPVGSTTPVWAEWRGN 374
MSCKFDHPPEAIQQTLQLQATPYPMRPGELQCSYYLKTGKCKFGATCRFDHPAMAPEHATALAAGQYAGAGGAGGMNGHVGGAAGMHAMLAMGRVGMGYYEGTAGGGMLDMMGLPGQQMLANFGAGAPLAQLPQRPGEKECTFFLRTGRCQYGPRCKFHHPLDKLQGALMGLNGVHGGPHLSHPHVTGLHAPGFGHPGLEGLYSPYALPASGPAGLSHAGHLAMRAGAGGLGSSGAGGEGKGRCPCALVRSRVPFICGPGNARTAPPVGSTTPVWAEWRGN
Sbjct: 1 MSCKFDHPPEAIQQTLQLQATPYPMRPGELQCSYYLKTGKCKFGATCRFDHPAMAPEHATALAAGQYAGAGGAGGMNGHVGGAAGMHAMLAMGRVGMGYYEGTAGGGMLDMMGLPGQQMLANFGAGAPLAQLPQRPGEKECTFFLRTGRCQYGPRCKFHHPLDKLQGALMGLNGVHGGPHLSHPHVTGLHAPGFGHPGLEGLYSPYALPASGPAGLSHAGHLAMRAGAGGLGSSGAGGEGKGRCPCALVRSRVPFICGPGNARTAPPVGSTTPVWAEWRGN 281
BLAST of EWM30456.1 vs. NCBI_GenBank
Match: gi|302823236|ref|XP_002993272.1| (hypothetical protein SELMODRAFT_45667, partial [Selaginella moellendorffii] >gi|300138942|gb|EFJ05693.1| hypothetical protein SELMODRAFT_45667, partial [Selaginella moellendorffii]) HSP 1 Score: 168.703 bits (426), Expect = 4.791e-46 Identity = 96/246 (39.02%), Postives = 127/246 (51.63%), Query Frame = 0
Query: 18 YPQRPGELECQYYMKTGTCKYATKCKFHHPPDVTPTWGTVAPATDVTIGLNKESYPRRPGEQQCTFFLKTGTCKYKMSCKFDHPPEA--IQQTLQLQATPYPMRPGELQCSYYLKTGKCKFGATCRFDHPAMAPEHATALAAGQYAGAGGAGGMNGHVGGAAGMHAMLAMGRVGMGYYEGTAGGGMLDMMGLPGQQMLANFGAGAPLAQLPQRPGEKECTFFLRTGRCQYGPRCKFHHPLDKLQGA 261
YP+RPGE +C YYM+TG C + CKF+HPP+ I K YP RPG+ +C +FLKTGTCK+ +CK+DHP + IQ +QL P RPGE +C+YY++TG CK+G TC+F HP P ++ A A A G A G G Y G MGLP G G P+RPG EC ++L+TG C+YG C+FHHP D++ +
Sbjct: 6 YPERPGEQDCVYYMRTGLCAFGMSCKFNHPPNRK---------LAAAIARGKGEYPERPGQPECQYFLKTGTCKFGSTCKYDHPRDKAGIQSRVQLNIVGLPYRPGEKECAYYMRTGSCKYGVTCKFHHP--QPAVVPSIYAAAAAAAAAGASQPGTPNAATGTPQHFQPGSPTTADYSPFVPGS--PTMGLPAGLREHKGGGGG--DAFPERPGVAECQYYLKTGDCKYGASCRFHHPRDRISAS 236 HSP 2 Score: 110.538 bits (275), Expect = 3.048e-24 Identity = 70/187 (37.43%), Postives = 89/187 (47.59%), Query Frame = 0
Query: 13 VGAVCYPQRPGELECQYYMKTGTCKYATKCKFHHP-PDVTPTW---------------GTVAPATDV----------------------TIGLNK-----------ESYPRRPGEQQCTFFLKTGTCKYKMSCKFDHPPEAIQQTLQLQATP--YPMRPGELQCSYYLKTGKCKFGATCRFDHPAMA 148
+ V P RPGE EC YYM+TG+CKY CKFHHP P V P+ GT AT T+GL +++P RPG +C ++LKTG CKY SC+F HP + I + +P P+R G CSYY++ G CKFG TC+FDHP A
Sbjct: 92 LNIVGLPYRPGEKECAYYMRTGSCKYGVTCKFHHPQPAVVPSIYAAAAAAAAAGASQPGTPNAATGTPQHFQPGSPTTADYSPFVPGSPTMGLPAGLREHKGGGGGDAFPERPGVAECQYYLKTGDCKYGASCRFHHPRDRISASAPTMLSPMGLPLRTGVQPCSYYIRFGICKFGPTCKFDHPLAA 278 HSP 3 Score: 82.8037 bits (203), Expect = 2.901e-14 Identity = 43/94 (45.74%), Postives = 55/94 (58.51%), Query Frame = 0
Query: 12 GVGAVCYPQRPGELECQYYMKTGTCKYATKCKFHHPPDVTPTWGTVAPATDVTIGLNKESYPRRPGEQQCTFFLKTGTCKYKMSCKFDHPPEAI 105
G G +P+RPG ECQYY+KTG CKY C+FHHP D AP +GL P R G Q C+++++ G CK+ +CKFDHP AI
Sbjct: 194 GGGGDAFPERPGVAECQYYLKTGDCKYGASCRFHHPRD---RISASAPTMLSPMGL-----PLRTGVQPCSYYIRFGICKFGPTCKFDHPLAAI 279
BLAST of EWM30456.1 vs. NCBI_GenBank
Match: gi|302824291|ref|XP_002993790.1| (hypothetical protein SELMODRAFT_45658, partial [Selaginella moellendorffii] >gi|300138386|gb|EFJ05156.1| hypothetical protein SELMODRAFT_45658, partial [Selaginella moellendorffii]) HSP 1 Score: 166.392 bits (420), Expect = 3.121e-45 Identity = 98/248 (39.52%), Postives = 129/248 (52.02%), Query Frame = 0
Query: 18 YPQRPGELECQYYMKTGTCKYATKCKFHHPPDVTPTWGTVAPATDVTIGLNKESYPRRPGEQQCTFFLKTGTCKYKMSCKFDHPPEA--IQQTLQLQATPYPMRPGELQCSYYLKTGKCKFGATCRFDH--PAMAPEHATALAAGQYAGAGGAGGMNGHVGGAAGMHAMLAMGRVGMGYYEGTAGGGMLDMMGLPGQQMLANFGAGAPLAQLPQRPGEKECTFFLRTGRCQYGPRCKFHHPLDKLQGA 261
YP+RPGE +C YYM+TG C + CKF+HPP+ I K YP RPG+ +C +FLKTGTCK+ +CK+DHP + IQ +QL P RPGE +C+YY++TG CK+G TC+F H PA+ P + AA A A G A G G Y G MGLP G G P+RPG EC ++L+TG C+YG C+FHHP D++ +
Sbjct: 6 YPERPGEQDCVYYMRTGLCAFGMSCKFNHPPNRK---------LAAAIARGKGEYPERPGQPECQYFLKTGTCKFGSTCKYDHPRDKAGIQSRVQLNIVGLPYRPGEKECAYYMRTGSCKYGVTCKFHHPQPAVVP---SIYAAAAAAAAAAGASQPGTPNAATGTPQHFQPGSPTTADYSPFVPGS--PTMGLPAGLREHKGGGGG--DAFPERPGVAECQYYLKTGDCKYGASCRFHHPRDRISAS 237 HSP 2 Score: 110.153 bits (274), Expect = 4.300e-24 Identity = 70/188 (37.23%), Postives = 89/188 (47.34%), Query Frame = 0
Query: 13 VGAVCYPQRPGELECQYYMKTGTCKYATKCKFHHP-PDVTPTW----------------GTVAPATDV----------------------TIGLNK-----------ESYPRRPGEQQCTFFLKTGTCKYKMSCKFDHPPEAIQQTLQLQATP--YPMRPGELQCSYYLKTGKCKFGATCRFDHPAMA 148
+ V P RPGE EC YYM+TG+CKY CKFHHP P V P+ GT AT T+GL +++P RPG +C ++LKTG CKY SC+F HP + I + +P P+R G CSYY++ G CKFG TC+FDHP A
Sbjct: 92 LNIVGLPYRPGEKECAYYMRTGSCKYGVTCKFHHPQPAVVPSIYAAAAAAAAAAGASQPGTPNAATGTPQHFQPGSPTTADYSPFVPGSPTMGLPAGLREHKGGGGGDAFPERPGVAECQYYLKTGDCKYGASCRFHHPRDRISASAPTMLSPMGLPLRTGVQPCSYYIRFGICKFGPTCKFDHPLAA 279 HSP 3 Score: 82.8037 bits (203), Expect = 2.939e-14 Identity = 43/94 (45.74%), Postives = 55/94 (58.51%), Query Frame = 0
Query: 12 GVGAVCYPQRPGELECQYYMKTGTCKYATKCKFHHPPDVTPTWGTVAPATDVTIGLNKESYPRRPGEQQCTFFLKTGTCKYKMSCKFDHPPEAI 105
G G +P+RPG ECQYY+KTG CKY C+FHHP D AP +GL P R G Q C+++++ G CK+ +CKFDHP AI
Sbjct: 195 GGGGDAFPERPGVAECQYYLKTGDCKYGASCRFHHPRD---RISASAPTMLSPMGL-----PLRTGVQPCSYYIRFGICKFGPTCKFDHPLAAI 280
BLAST of EWM30456.1 vs. NCBI_GenBank
Match: gi|1142683287|gb|ONM41330.1| (Zinc finger CCCH domain-containing protein 37 [Zea mays]) HSP 1 Score: 168.318 bits (425), Expect = 1.164e-44 Identity = 101/266 (37.97%), Postives = 130/266 (48.87%), Query Frame = 0
Query: 18 YPQRPGELECQYYMKTGTCKYATKCKFHHPPDV----TPTWGTVAPATDVTIGLNKESY-PRRPGEQQCTFFLKTGTCKYKMSCKFDHPPEAIQ--------QTLQLQATPYPMRPGELQCSYYLKTGKCKFGATCRFDHPAMAPEHATALAAGQ--YAGAGGAGGMNGHVGGAAGMHAMLAMGRVGMGYYEGTAGGGMLDMMGLPGQQMLAN----------FGAGAPLAQL-PQRPGEKECTFFLRTGRCQYGPRCKFHHPLDK 257
YPQRPG+ +C +YM TGTCKY CKF HP V P W V LN E Y P RPGE C + L + CK+K CKF+HP E + ++L T P+RP E CS+Y KTGKCKFGA C+F+HP + +L A + Y A H+GG V + A + GLP + + AN G P+ + PQRPGE C F+++TG C+Y CKFHHP D+
Sbjct: 138 YPQRPGQKDCAFYMSTGTCKYGETCKFDHPQWVPEGGVPNWKEV---------LNDEDYYPERPGEPDCPYLL-SSRCKFKSKCKFNHPKEMVNALGTRTDNESLIADTTILPVRPSEPVCSFYAKTGKCKFGAVCKFNHPKLEDIKTPSLIAKETIYRATTDAA---AHIGGTD--------DSVPAKTHAPIAPAEAHNAKGLPIRPVSANMVLFVASIILIGQVEPMPMIYPQRPGEIVCDFYMKTGSCKYAQNCKFHHPFDR 382 HSP 2 Score: 63.1586 bits (152), Expect = 2.531e-7 Identity = 29/60 (48.33%), Postives = 35/60 (58.33%), Query Frame = 0
Query: 16 VCYPQRPGELECQYYMKTGTCKYATKCKFHHPPDVTPTWGTVAPATDVTIGLNKESYPRR 75
+ YPQRPGE+ C +YMKTG+CKYA CKFHHP D + T + L PRR
Sbjct: 348 MIYPQRPGEIVCDFYMKTGSCKYAQNCKFHHPFDRSAPHSKENEDTQQPVALTLAGLPRR 407
BLAST of EWM30456.1 vs. NCBI_GenBank
Match: gi|976926835|gb|KVI10680.1| (Zinc finger, CCCH-type [Cynara cardunculus var. scolymus]) HSP 1 Score: 166.777 bits (421), Expect = 2.234e-44 Identity = 88/259 (33.98%), Postives = 130/259 (50.19%), Query Frame = 0
Query: 5 HATGEEDGVGAVCYPQRPGELECQYYMKTGTCKYATKCKFHHPPDVTPTWGTVAPATDVTIGLNKESYPRRPGEQQCTFFLKTGTCKYKMSCKFDHPPEAI-QQTLQLQATPYPMRPGELQCSYYLKTGKCKFGATCRFDHPAMAPEHATALAAGQ--YAGAGGAGGMNGHVGGAAGMHAMLAMGRVGMGYYEGTAG--GGMLDMMGLPGQQMLANFGAGAPLAQLPQRPGEKECTFFLRTGRCQYGPRCKFHHPLDKL 258
G+ED +G+ YP RPGE C YY++TG C Y C+F+HP + + + P R GE C +FLKTG CKY +CK++HP + + + L PMR G+ C +Y++TG CKFG TC+F HP AP+ + +G Y +G +NG + M G +G + + ++ G + P + LP+RPGE EC +F+ TG C+YG CK+HHP +K+
Sbjct: 36 QTNGKEDEIGSTAYPARPGEPNCIYYLRTGVCGYGDNCRFNHP------------TYNGQMNQHGGDLPERIGEPDCVYFLKTGACKYGSTCKYNHPRDRRGAEPIVLNMVGLPMRQGQKSCPHYVRTGSCKFGVTCKFHHPQPAPDGSNTPVSGSLTYGPSGAPPHINGSAWSYPSPQTYMPMVIPPAGINQGWSPYIANLNPLLSTNGSGSIDQLYPSTPNSHLPERPGEPECRYFMNTGACKYGTDCKYHHPREKM 282
BLAST of EWM30456.1 vs. NCBI_GenBank
Match: gi|1142683284|gb|ONM41327.1| (Zinc finger CCCH domain-containing protein 37 [Zea mays]) HSP 1 Score: 164.466 bits (415), Expect = 1.986e-43 Identity = 98/256 (38.28%), Postives = 127/256 (49.61%), Query Frame = 0
Query: 18 YPQRPGELECQYYMKTGTCKYATKCKFHHPPDV----TPTWGTVAPATDVTIGLNKESY-PRRPGEQQCTFFLKTGTCKYKMSCKFDHPPEAIQ--------QTLQLQATPYPMRPGELQCSYYLKTGKCKFGATCRFDHPAMAPEHATALAAGQ--YAGAGGAGGMNGHVGGAAGMHAMLAMGRVGMGYYEGTAGGGMLDMMGLPGQQMLANFGAGAPLAQL-PQRPGEKECTFFLRTGRCQYGPRCKFHHPLDK 257
YPQRPG+ +C +YM TGTCKY CKF HP V P W V LN E Y P RPGE C + L + CK+K CKF+HP E + ++L T P+RP E CS+Y KTGKCKFGA C+F+HP + +L A + Y A H+GG V + A + GLP + + P+ + PQRPGE C F+++TG C+Y CKFHHP D+
Sbjct: 138 YPQRPGQKDCAFYMSTGTCKYGETCKFDHPQWVPEGGVPNWKEV---------LNDEDYYPERPGEPDCPYLL-SSRCKFKSKCKFNHPKEMVNALGTRTDNESLIADTTILPVRPSEPVCSFYAKTGKCKFGAVCKFNHPKLEDIKTPSLIAKETIYRATTDAA---AHIGGTD--------DSVPAKTHAPIAPAEAHNAKGLPIRPV-------EPMPMIYPQRPGEIVCDFYMKTGSCKYAQNCKFHHPFDR 365 HSP 2 Score: 62.7734 bits (151), Expect = 3.203e-7 Identity = 29/60 (48.33%), Postives = 35/60 (58.33%), Query Frame = 0
Query: 16 VCYPQRPGELECQYYMKTGTCKYATKCKFHHPPDVTPTWGTVAPATDVTIGLNKESYPRR 75
+ YPQRPGE+ C +YMKTG+CKYA CKFHHP D + T + L PRR
Sbjct: 331 MIYPQRPGEIVCDFYMKTGSCKYAQNCKFHHPFDRSAPHSKENEDTQQPVALTLAGLPRR 390
BLAST of EWM30456.1 vs. NCBI_GenBank
Match: gi|1063732253|ref|NP_001330309.1| (zinc finger nuclease 3 [Arabidopsis thaliana] >gi|1039019416|gb|ANM68569.1| zinc finger nuclease 3 [Arabidopsis thaliana]) HSP 1 Score: 160.999 bits (406), Expect = 2.347e-43 Identity = 88/255 (34.51%), Postives = 130/255 (50.98%), Query Frame = 0
Query: 8 GEEDGVGAV-CYPQRPGELECQYYMKTGTCKYATKCKFHHPPDVTPTWGTVAPATDVTIGLNKESYPRRPGEQQCTFFLKTGTCKYKMSCKFDHPPEA--IQQTLQLQATPYPMRPGELQCSYYLKTGKCKFGATCRFDHPAMAPEHATALAAGQ--YAGAGGAGGMNGHVGGAAGMHAMLAMGRVGMGYYEGTAGGGMLDMMGLPGQQMLANFGAGAPLAQLPQRPGEKECTFFLRTGRCQYGPRCKFHHPLDK 257
G +D +G YP+R GE +C YY++TG C++ + C+F+HP D T K YP R G+ +C F+LKTGTCK+ ++CKF HP I ++ + YP+RP E CSY+L+ G+CKFG TC+F+HP + G Y+ G + A + G+ G+ GG+ G + F A P+RPG+ EC F+++TG C++G CKFHHP D+
Sbjct: 7 GSDDTMGVDGSYPERHGEPDCAYYIRTGLCRFGSTCRFNHPHDRKLVIATAR---------IKGEYPERIGQPECEFYLKTGTCKFGVTCKFHHPRNKAGIDGSVSVNVLSYPLRPNEDDCSYFLRIGQCKFGGTCKFNHPQTQSTNLMVSVRGSPVYSALQSLTGQPSYSWSRTSFVANPPRLQDPSGFASGSQ-GGLFSSGFHSGNSVPLGFYALPRENVFPERPGQPECQFYMKTGDCKFGTVCKFHHPRDR 251
BLAST of EWM30456.1 vs. NCBI_GenBank
Match: gi|685375923|ref|XP_009120963.1| (PREDICTED: zinc finger CCCH domain-containing protein 58-like [Brassica rapa]) HSP 1 Score: 165.236 bits (417), Expect = 2.685e-43 Identity = 97/277 (35.02%), Postives = 140/277 (50.54%), Query Frame = 0
Query: 18 YPQRPGELECQYYMKTGTCKYATKCKFHHPPDVTPTWGTVAPATDVTIGLNKE--SYPRRPGEQQCTFFLKTGTCKYKMSCKFDHPPE--AIQQTLQLQATPYPMRPGELQCSYYLKTGKCKFGATCRFDHP----AMAPEHATALAAGQ--YAGAGGAGGM---------NGHVGGAAGMHAMLAMGRVGMGYYEG----TAGGGMLDMMG---LPGQQMLANFGAGAPLAQLPQRPGEKECTFFLRTGRCQYGPRCKFHHPLDKLQGALMGLNGV 268
+P+RP E +C YY++TG C Y ++C+F+HPP+ P G GL E +P R G+ C F++TGTCK+ SCK+ HP + T+ L +P+RPGE +CSYY++TG CKFG+TCRF HP A P H L+ G Y G+ +V G ++ + + GM Y G A G MG +P + PQRPGE +C +F+RTG C++G C+FHHPL+ + L+ +
Sbjct: 42 FPERPDEPDCIYYLRTGVCGYGSRCRFNHPPNRVPVLG----------GLRTEPGEFPERMGQPVCQHFMRTGTCKFGASCKYHHPRQRGGDSVTVSLNYMGFPLRPGEKECSYYMRTGHCKFGSTCRFHHPLPPGAQPPSHQQQLSTGSAIYPSLQSQSGVFVARPQLLPGSYVQSPYGTYSQMVLPPPGMVPYPGWNPYQASPGSQPSMGSSSVPLAPAYQTSLSSNKEQSFPQRPGEPDCQYFMRTGDCKFGASCRFHHPLEAAPPKGVNLSNI 308 HSP 2 Score: 86.2705 bits (212), Expect = 7.141e-15 Identity = 41/90 (45.56%), Postives = 58/90 (64.44%), Query Frame = 0
Query: 57 VAPATDVTIGLNKE-SYPRRPGEQQCTFFLKTGTCKYKMSCKFDHPPEAI-QQTLQLQATPYPMRPGELQCSYYLKTGKCKFGATCRFDH 144
+APA ++ NKE S+P+RPGE C +F++TG CK+ SC+F HP EA + + L P+RPG CS++ + G CKFG C+FDH
Sbjct: 249 LAPAYQTSLSSNKEQSFPQRPGEPDCQYFMRTGDCKFGASCRFHHPLEAAPPKGVNLSNIGLPLRPGTAPCSHFAQHGICKFGPDCKFDH 338 HSP 3 Score: 80.1073 bits (196), Expect = 8.009e-13 Identity = 36/83 (43.37%), Postives = 48/83 (57.83%), Query Frame = 0
Query: 18 YPQRPGELECQYYMKTGTCKYATKCKFHHPPDVTPTWGTVAPATDVTIGLNKESYPRRPGEQQCTFFLKTGTCKYKMSCKFDH 100
+PQRPGE +CQY+M+TG CK+ C+FHHP + P G + L+ P RPG C+ F + G CK+ CKFDH
Sbjct: 265 FPQRPGEPDCQYFMRTGDCKFGASCRFHHPLEAAPPKG---------VNLSNIGLPLRPGTAPCSHFAQHGICKFGPDCKFDH 338
BLAST of EWM30456.1 vs. NCBI_GenBank
Match: gi|1032282009|gb|OAO96337.1| (ZFN3 [Arabidopsis thaliana]) HSP 1 Score: 162.925 bits (411), Expect = 2.824e-43 Identity = 89/255 (34.90%), Postives = 131/255 (51.37%), Query Frame = 0
Query: 8 GEEDGVGAV-CYPQRPGELECQYYMKTGTCKYATKCKFHHPPDVTPTWGTVAPATDVTIGLNKESYPRRPGEQQCTFFLKTGTCKYKMSCKFDHPPEA--IQQTLQLQATPYPMRPGELQCSYYLKTGKCKFGATCRFDHPAMAPEHATALAAGQ--YAGAGGAGGMNGHVGGAAGMHAMLAMGRVGMGYYEGTAGGGMLDMMGLPGQQMLANFGAGAPLAQLPQRPGEKECTFFLRTGRCQYGPRCKFHHPLDK 257
G +D +G YP+R GE +C YY++TG C++ + C+F+HP D T K YP R G+ +C F+LKTGTCK+ ++CKF HP I ++ + YP+RP E CSY+L+TG+CKFG TC+F+HP + G Y+ G + A + G+ G+ GG+ G + F A P+RPG+ EC F+++TG C++G CKFHHP D+
Sbjct: 7 GSDDTMGVDGSYPERHGEPDCAYYIRTGLCRFGSTCRFNHPHDRKLVIATAR---------IKGEYPERIGQPECEFYLKTGTCKFGVTCKFHHPRNKAGIDGSVSVNVLSYPLRPNEDDCSYFLRTGQCKFGGTCKFNHPQTQSTNLMVSVRGSPVYSALQSLTGQPSYSWSRTSFVANPPRLQDPSGFASGSQ-GGLFSSGFHSGNSVPLGFYALPRENVFPERPGQPECQFYMKTGDCKFGTVCKFHHPRDR 251 HSP 2 Score: 84.7297 bits (208), Expect = 1.367e-14 Identity = 42/84 (50.00%), Postives = 51/84 (60.71%), Query Frame = 0
Query: 18 YPQRPGELECQYYMKTGTCKYATKCKFHHPPDVTPTWGTVAPATDVTIGLNKESYPRRPGEQQCTFFLKTGTCKYKMSCKFDHP 101
+P+RPG+ ECQ+YMKTG CK+ T CKFHHP D P D L+ P RPGE C F+ + G CK+ SCKFDHP
Sbjct: 219 FPERPGQPECQFYMKTGDCKFGTVCKFHHPRDRQ------TPPPDCV--LSSVGLPLRPGEPLCVFYSRYGICKFGPSCKFDHP 294 HSP 3 Score: 76.2554 bits (186), Expect = 8.035e-12 Identity = 36/81 (44.44%), Postives = 51/81 (62.96%), Query Frame = 0
Query: 69 KESYPRRPGEQQCTFFLKTGTCKYKMSCKFDHPPEAIQQT----LQLQATPYPMRPGELQCSYYLKTGKCKFGATCRFDHP 145
+ +P RPG+ +C F++KTG CK+ CKF HP + +QT L + P+RPGE C +Y + G CKFG +C+FDHP
Sbjct: 216 ENVFPERPGQPECQFYMKTGDCKFGTVCKFHHPRD--RQTPPPDCVLSSVGLPLRPGEPLCVFYSRYGICKFGPSCKFDHP 294 The following BLAST results are available for this feature:
BLAST of EWM30456.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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