EWM28516.1, cds2157 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28516.1 vs. NCBI_GenBank
Match: gi|585110933|gb|EWM28516.1| (HPP family protein [Nannochloropsis gaditana]) HSP 1 Score: 684.871 bits (1766), Expect = 0.000e+0 Identity = 331/331 (100.00%), Postives = 331/331 (100.00%), Query Frame = 0 Query: 1 MGLPHFHKDNDVQRRNVCNDSSPKSSGSGKEGREVVGSMAKEFLTQYLSKWLGVPGRKDGNRAPSLRHSFVSLFQATLSISVLAFLDMGMTISAEDFMFLVGSFGATAVLLYSAHGSPLAQPRNVMGGHFVSSLAGVTVYKVIGNVPYLSAGLAVGLAIFCMERTNTLHPPGGATALVAIVGGEAVTRAGYWYVLFPCCTGAFMMLVVALVCNNMDPERVYPQYWSDNFPIWHTCRQILGGRCGDCGRKANRAEEEEDSASSRSTSPRRYPRVASIELVDDLDAPAETPPGSPRWRAVTMPSPGHASTRTGAGGHVVDPVVLEEEDTAFPV 331 MGLPHFHKDNDVQRRNVCNDSSPKSSGSGKEGREVVGSMAKEFLTQYLSKWLGVPGRKDGNRAPSLRHSFVSLFQATLSISVLAFLDMGMTISAEDFMFLVGSFGATAVLLYSAHGSPLAQPRNVMGGHFVSSLAGVTVYKVIGNVPYLSAGLAVGLAIFCMERTNTLHPPGGATALVAIVGGEAVTRAGYWYVLFPCCTGAFMMLVVALVCNNMDPERVYPQYWSDNFPIWHTCRQILGGRCGDCGRKANRAEEEEDSASSRSTSPRRYPRVASIELVDDLDAPAETPPGSPRWRAVTMPSPGHASTRTGAGGHVVDPVVLEEEDTAFPV Sbjct: 1 MGLPHFHKDNDVQRRNVCNDSSPKSSGSGKEGREVVGSMAKEFLTQYLSKWLGVPGRKDGNRAPSLRHSFVSLFQATLSISVLAFLDMGMTISAEDFMFLVGSFGATAVLLYSAHGSPLAQPRNVMGGHFVSSLAGVTVYKVIGNVPYLSAGLAVGLAIFCMERTNTLHPPGGATALVAIVGGEAVTRAGYWYVLFPCCTGAFMMLVVALVCNNMDPERVYPQYWSDNFPIWHTCRQILGGRCGDCGRKANRAEEEEDSASSRSTSPRRYPRVASIELVDDLDAPAETPPGSPRWRAVTMPSPGHASTRTGAGGHVVDPVVLEEEDTAFPV 331
BLAST of EWM28516.1 vs. NCBI_GenBank
Match: gi|739439177|ref|WP_037299209.1| (HPP family protein [Runella limosa]) HSP 1 Score: 172.94 bits (437), Expect = 2.845e-49 Identity = 81/155 (52.26%), Postives = 113/155 (72.90%), Query Frame = 0 Query: 68 HSFVSLFQATLSISVLAFLDMGMTISAEDFMFLVGSFGATAVLLYSAHGSPLAQPRNVMGGHFVSSLAGVTVYKVIGNVPYLSAGLAVGLAIFCMERTNTLHPPGGATALVAIVGGEAVTRAGYWYVLFPCCTGAFMMLVVALVCNNMDPERVYP 222 +F S A L I ++AFL T+S D +FL+GSFGA++VL++ A SPLAQPRN++GGH +S++ GVT+Y+V N+ + +A LAV L+I CM+ T TLHPPGGATAL+A++G E + GYW+VL P TG F++L+VAL+ NN+ P R YP Sbjct: 27 ENFWSFTGAFLGIGLIAFLQT--TLSEVDNLFLIGSFGASSVLIFGAIQSPLAQPRNLVGGHLISAVLGVTIYQVFPNIIWFTAPLAVSLSILCMQITKTLHPPGGATALIAVIGSEKIKHLGYWFVLSPVATGVFILLIVALIFNNLTPNRKYP 179
BLAST of EWM28516.1 vs. NCBI_GenBank
Match: gi|496348601|ref|WP_009057779.1| (HPP family protein, partial [Nitritalea halalkaliphila] >gi|389660337|gb|EIM72029.1| HPP family protein [Nitritalea halalkaliphila LW7]) HSP 1 Score: 166.392 bits (420), Expect = 1.385e-46 Identity = 87/191 (45.55%), Postives = 123/191 (64.40%), Query Frame = 0 Query: 67 RHSFVSLFQATLSISVLAFLDMGMTISAEDFMFLVGSFGATAVLLYSAHGSPLAQPRNVMGGHFVSSLAGVTVYKVIGNVPYLSAGLAVGLAIFCMERTNTLHPPGGATALVAIVGGEAVTRAGYWYVLFPCCTGAFMMLVVALVCNNMDPERVYPQ--YWSDNF-----PIWHTCRQILGGRCGDCGRKA 250 R F S A L I ++AF+ + + D +FL+GSFGAT VL+Y SPLAQPRN++GGH VS++ GVTV++++ ++ +L+A LAV L+I M+ T TLHPPGGATAL+A+ G E++ GY YVLFP +G ++L+VAL+ NNM +R YP +S NF PI ++I R +KA Sbjct: 26 REKFWSFIGAFLGIGIIAFIQ-SIYFTESDNLFLIGSFGATCVLIYGVIQSPLAQPRNLIGGHLVSAIIGVTVFQLLPDIIWLTAPLAVALSIIGMQYTKTLHPPGGATALIAVSGSESIKDLGYLYVLFPVLSGVVILLLVALIVNNMTSQREYPSDGRFSRNFKWFIDPIRDQSQRIKQKRNNRKNKKA 215
BLAST of EWM28516.1 vs. NCBI_GenBank
Match: gi|1011242557|ref|WP_062161535.1| (HPP family protein [Chryseobacterium sp. IHB B 17019] >gi|959197339|gb|ALR30538.1| HPP family protein [Chryseobacterium sp. IHB B 17019]) HSP 1 Score: 160.614 bits (405), Expect = 1.439e-44 Identity = 78/158 (49.37%), Postives = 109/158 (68.99%), Query Frame = 0 Query: 67 RHSFVSLFQATLSISVLAFLDMGMTISAEDFMFLVGSFGATAVLLYSAHGSPLAQPRNVMGGHFVSSLAGVTVYKVIGNVPYLSAGLAVGLAIFCMERTNTLHPPGGATALVAIVGGEAVTRAGYWYVLFPCCTGAFMMLVVALVCNNMDPERVYPQY 224 + F S A I ++AF+ T+SA + +FL+GSFGA++VL+Y A SPLAQPRN++GGH +S+L GVTVYK++ ++ +LSA LAV +I M+ T TLHPPGGATAL+A+ + G+WYVL P TG ++L+VAL NN+ P R YP + Sbjct: 25 KEHFWSFLGAFFGIGIIAFIQ-SHTLSATENIFLIGSFGASSVLIYGAIQSPLAQPRNLVGGHVISALVGVTVYKIVPDIIWLSAPLAVAFSIVLMQYTKTLHPPGGATALIAVSSTGKIPELGFWYVLSPVLTGCIILLIVALFFNNITPNRSYPTH 181
BLAST of EWM28516.1 vs. NCBI_GenBank
Match: gi|1211975204|ref|WP_088554995.1| (HPP family protein [Calderihabitans maritimus] >gi|1205307356|dbj|GAW93961.1| HPP family protein [Calderihabitans maritimus]) HSP 1 Score: 159.458 bits (402), Expect = 1.665e-44 Identity = 81/170 (47.65%), Postives = 110/170 (64.71%), Query Frame = 0 Query: 56 GRKDGNRAPSLRHSFVSLFQATLSISVLAFLDMGMTISAEDFMFLVGSFGATAVLLYSAHGSPLAQPRNVMGGHFVSSLAGVTVYKVIGNVPYLSAGLAVGLAIFCMERTNTLHPPGGATALVAIVGGEAVTRAGYWYVLFPCCTGAFMMLVVALVCNNMDPERVYPQYW 225 GR+ S S + L IS + F+ + D ++GSFGA+AVL+Y+A SPLAQPRN+M GH +S+L GVT YK++ +VP+LSA LAV LAI M T +LHPPGGATAL+A++GG + GY YV+ P GA ML +AL+CNN+ +R YP++W Sbjct: 10 GRQKSPERESAYEILWSWIGSFLGISAVGFISQKW-LEPRDLTLIIGSFGASAVLIYAAIKSPLAQPRNLMLGHIISALVGVTCYKLV-SVPWLSAALAVSLAIVAMHLTKSLHPPGGATALIAVIGGPKIHALGYLYVIIPVGLGALTMLCIALICNNLAEKRRYPEFW 177
BLAST of EWM28516.1 vs. NCBI_GenBank
Match: gi|652298977|ref|WP_026709379.1| (HPP family protein [Flavobacterium frigidarium]) HSP 1 Score: 160.229 bits (404), Expect = 1.780e-44 Identity = 76/156 (48.72%), Postives = 109/156 (69.87%), Query Frame = 0 Query: 69 SFVSLFQATLSISVLAFLDMGMTISAEDFMFLVGSFGATAVLLYSAHGSPLAQPRNVMGGHFVSSLAGVTVYKVIGNVPYLSAGLAVGLAIFCMERTNTLHPPGGATALVAIVGGEAVTRAGYWYVLFPCCTGAFMMLVVALVCNNMDPERVYPQY 224 SFV F L I +LA+L T++ D +FL+GSFGA++VL+Y SPL+QPRN++GGH +S++ GVT+ K++ +V +L++ LAV ++I M+ T TLHPPGGATAL+A+ G + GYWYV+ P G ++LV+ALV NNM P R YP + Sbjct: 31 SFVGSF---LGIGILAYLQ-SRTLADSDVLFLIGSFGASSVLIYGVIQSPLSQPRNLVGGHIISAIVGVTIAKLVPDVIWLASALAVSISIILMQITKTLHPPGGATALIAVTGSAHIKALGYWYVISPVLIGVLILLVIALVVNNMTPNRYYPNH 182
BLAST of EWM28516.1 vs. NCBI_GenBank
Match: gi|1085079845|gb|OGS78997.1| (HPP family protein [Fluviicola sp. RIFCSPHIGHO2_02_FULL_43_260] >gi|1085087144|gb|OGS86019.1| HPP family protein [Fluviicola sp. RIFCSPHIGHO2_12_FULL_43_24] >gi|1085087556|gb|OGS86428.1| HPP family protein [Fluviicola sp. RIFCSPHIGHO2_01_FULL_43_53]) HSP 1 Score: 159.844 bits (403), Expect = 2.734e-44 Identity = 77/156 (49.36%), Postives = 111/156 (71.15%), Query Frame = 0 Query: 67 RHSFVSLFQATLSISVLAFLDMGMTISAEDFMFLVGSFGATAVLLYSAHGSPLAQPRNVMGGHFVSSLAGVTVYKVIGNVPYLSAGLAVGLAIFCMERTNTLHPPGGATALVAIVGGEAVTRAGYWYVLFPCCTGAFMMLVVALVCNNMDPERVYP 222 + F S A + I ++AF+ T++ ++ +FL+GSFGA++VL+Y A SPLAQPRN++GGH +S+L GVTVY+ I +V +L+A +AV +I M+ T TLHPPGGATAL+A++G E + GY+YVL P TG+ ++L VAL+ NNM R YP Sbjct: 26 KEHFWSFIGAFVGIGIIAFVQ-SYTLTKDENIFLIGSFGASSVLIYGAIQSPLAQPRNLVGGHVISALIGVTVYRFIPDVIWLTAPMAVAFSIVAMQVTKTLHPPGGATALIAVIGSEKIKALGYFYVLSPVLTGSLILLAVALIFNNMTTHRKYP 180
BLAST of EWM28516.1 vs. NCBI_GenBank
Match: gi|499904648|ref|WP_011585382.1| (HPP family protein [Cytophaga hutchinsonii] >gi|110281079|gb|ABG59265.1| CBS-domain-containing membrane protein [Cytophaga hutchinsonii ATCC 33406] >gi|1104039899|emb|SFX33048.1| HPP family protein [Cytophaga hutchinsonii ATCC 33406]) HSP 1 Score: 159.458 bits (402), Expect = 3.353e-44 Identity = 77/156 (49.36%), Postives = 108/156 (69.23%), Query Frame = 0 Query: 67 RHSFVSLFQATLSISVLAFLDMGMTISAEDFMFLVGSFGATAVLLYSAHGSPLAQPRNVMGGHFVSSLAGVTVYKVIGNVPYLSAGLAVGLAIFCMERTNTLHPPGGATALVAIVGGEAVTRAGYWYVLFPCCTGAFMMLVVALVCNNMDPERVYP 222 + +F S A + I ++ FL + E+ +FL+GSFGAT+VL++ A SPL+QPRN++GGH +S++ GVT YK+ ++ ++SA AV +I M+ T TLHPPGGATAL+A++G E + GYWYVL P TG F+MLVVAL+ NNM R YP Sbjct: 26 KENFWSFIGAFVGIGLIGFLQSKIVTDIEN-VFLIGSFGATSVLVFGAIQSPLSQPRNLIGGHVISAVVGVTAYKLFPDMLWISAPFAVSFSIVLMQITKTLHPPGGATALIAVIGSEKIKHLGYWYVLSPVLTGCFIMLVVALIFNNMTSHRSYP 180
BLAST of EWM28516.1 vs. NCBI_GenBank
Match: gi|1054563084|ref|WP_066332371.1| (HPP family protein [Flavobacterium crassostreae] >gi|1044463834|gb|OCB77970.1| HPP family protein [Flavobacterium crassostreae]) HSP 1 Score: 159.458 bits (402), Expect = 3.431e-44 Identity = 73/156 (46.79%), Postives = 111/156 (71.15%), Query Frame = 0 Query: 67 RHSFVSLFQATLSISVLAFLDMGMTISAEDFMFLVGSFGATAVLLYSAHGSPLAQPRNVMGGHFVSSLAGVTVYKVIGNVPYLSAGLAVGLAIFCMERTNTLHPPGGATALVAIVGGEAVTRAGYWYVLFPCCTGAFMMLVVALVCNNMDPERVYP 222 + F S A + I ++AF + ++ E+ +FL+GSFGA++VL+Y A SPLAQPRN++GGH +S+ GVT+YK++ ++ +L+A LAV L+I M+ T TLHPPGGATAL+A++G E + GY+Y+L P TG ++ ++AL+ NN+ P R YP Sbjct: 26 KEHFWSFIGAFIGIGLIAFFQHHI-LTKEENIFLIGSFGASSVLIYGAIQSPLAQPRNLIGGHLISAFIGVTIYKLLPDIIWLTAPLAVALSIVAMQITKTLHPPGGATALIAVIGSEKIKTLGYFYLLSPVFTGTMILFIIALIFNNITPHRKYP 180
BLAST of EWM28516.1 vs. NCBI_GenBank
Match: gi|492834945|ref|WP_005988899.1| (HPP family protein [Desulfovibrio africanus] >gi|459315294|gb|EMG36076.1| CBS-domain-containing membrane protein [Desulfovibrio africanus PCS]) HSP 1 Score: 159.458 bits (402), Expect = 4.932e-44 Identity = 93/209 (44.50%), Postives = 126/209 (60.29%), Query Frame = 0 Query: 19 NDSSPKSSGSGKEGR--EVVGSMAKEFLTQYLSKWLGVPGRKDGNRAPSLRHSFVSLFQATLSISVLAFLDMGMTISAEDFMFLVGSFGATAVLLYSAHGSPLAQPRNVMGGHFVSSLAGVTVYKVIGNVPYLSAGLAVGLAIFCMERTNTLHPPGGATALVAIVGGEAVTRAGYWYVLFPCCTGAFMMLVVALVCNNMDPERVYPQYW 225 N P ++ + R E G+ +E + +YL+K + G+ P LR S A L I ++FL M M LVGSFGA+AVL+Y A SPLAQPRN++GGH +S+L GVT+ K++ + +++A LAV +I M T TLHPPGGATAL+A++GGE V G+ Y L P GA +MLVVALV NN+ P R YP +W Sbjct: 3 NKDIPTATLDSRSLRPEECEGNSCRESVLRYLTK---MRGKSVAPPCPCLREVCWSWLGAFLGIFAVSFLSHKMMDGTGPLM-LVGSFGASAVLIYGAVESPLAQPRNLLGGHVLSALVGVTIAKLLPDAVWIAAPLAVATSIAAMHVTRTLHPPGGATALIAVIGGEPVRALGFMYALAPVGLGALIMLVVALVVNNLSPRRCYPVFW 207 The following BLAST results are available for this feature:
BLAST of EWM28516.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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